RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0348
>gnl|CDD|35569 KOG0348, KOG0348, KOG0348, ATP-dependent RNA helicase [RNA processing and modification]. Length = 708
Score = 193 bits (492), Expect = 8e-50
Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 67/427 (15%)
Query: 3 FADLGLSPKVVCAVLDA-GYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
FA LGL P +V + PT +Q + IP++L+ D AQTG+GKT +++LP++
Sbjct: 138 FASLGLHPHLVSHLNTKMKISAPTSVQKQAIPVLLEGRDALVRAQTGSGKTLAYLLPIVQ 197
Query: 62 ILEKGRARVRM---PRTLILEPTRELAAQVADNFEKYGKNYNLTV-ALLIGGIPFEAQNK 117
L+ +++ P L++ PTRELA Q+ + +K K ++ V +L+GG +++
Sbjct: 198 SLQAMEPKIQRSDGPYALVIVPTRELALQIYETVQKLLKPFHWIVPGVLMGGEKKKSEKA 257
Query: 118 KLERGADVLICTPGRILDHF-NRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLV-- 174
+L +G ++LI TPGR++DH N + + + LV+DEADR+L++GF I I V
Sbjct: 258 RLRKGINILIGTPGRLVDHLKNTKSIKFSRLRWLVLDEADRLLELGFEKDITQILKAVHS 317
Query: 175 -----------PFTRQTLLFSATMTDELQKVSENFLQNPKRIEV-NTPSSTAETIEHCFV 222
P Q +L SAT+TD + ++++ L++P I + + S +
Sbjct: 318 IQNAECKDPKLPHQLQNMLLSATLTDGVNRLADLSLKDPVYISLDKSHSQLNPKDKAVQE 377
Query: 223 ATYAQYSKKCALLQ---QLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQG----FSVC-- 273
K QLLQ + + ++N EKQ FS
Sbjct: 378 VDDGPAGDKLDSFAIPEQLLQRYTVVPPKLRLVALAALLLNKVKFEEKQKMIVFFSCSDS 437
Query: 274 --------------------------------------AIHGNIDQRSRMKILSNFKEGT 295
+HG+++Q R + F
Sbjct: 438 VEFHYSLFSEALLSHLEGSSGAPDSEGLPPLFMDLKFYRLHGSMEQEERTSVFQEFSHSR 497
Query: 296 IQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIK 355
+++ +D+AARGLD+P VG V +D P +Y+HR+GRT RAG G+A + + +
Sbjct: 498 RAVLLCTDVAARGLDLPHVGLVVQYDPPFSTADYLHRVGRTARAGEKGEALLFLLPSEAE 557
Query: 356 HIDAIEK 362
+++ ++K
Sbjct: 558 YVNYLKK 564