RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0920
>gnl|CDD|36138 KOG0920, KOG0920, KOG0920, ATP-dependent RNA helicase A [RNA processing and modification]. Length = 924
Score = 44.5 bits (105), Expect = 7e-05
Identities = 73/386 (18%), Positives = 141/386 (36%), Gaps = 69/386 (17%)
Query: 24 PTPIQIKTIPLVLQRHDVCGIA-QTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTR 82
P TI ++ + V I+ +TG GKT +P IL++ + +P R
Sbjct: 173 PAYKMRDTILDAIEENQVVVISGETGCGKTTQ--VPQF-ILDEAIESGAACNIICTQPRR 229
Query: 83 ELAAQVADNFEK-YGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGK 141
A VA+ K G++ V + K R +L CT G +L +
Sbjct: 230 ISAISVAERVAKERGESLGEEVGYQVRL------ESKRSRETRLLFCTTGVLLRRL-QSD 282
Query: 142 LLMNNIEILVIDEA-DRMLDMGFIPYIQNITSLVPFTR--QTLLFSATMTDELQK----- 193
++ + +++DE +R ++ F+ + + L+P + +L SAT+ EL
Sbjct: 283 PTLSGVTHIIVDEVHERSINTDFLLIL--LKDLLPRNPDLKVILMSATLDAELFSDYFGG 340
Query: 194 ------------VSENFLQN-----PKRIEVNTPSSTAETIEHCFVATYAQYSK-KCALL 235
V E FL++ E ++ S E + + L+
Sbjct: 341 CPVITIPGRTFPVKEYFLEDILSKTGYVSEDDSARSGPERSQLRLARLKLWEPEIDYDLI 400
Query: 236 QQLLQS-QDTMKNGIIFC---------NQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRM 285
+ L++ + G I K+ + + F++ +H +I +
Sbjct: 401 EDLIEYIDEREFEGAILVFLPGWEEILQLKELLEVNLPFADSLKFAILPLHSSIPSEEQQ 460
Query: 286 KILSNFKEGTIQLMVASDLAARGLDIPDVGHVFN--------FDVPNRAE---------- 327
+ +GT ++++A+++A + I DV +V + +D +
Sbjct: 461 AVFKRPPKGTRKIILATNIAETSITIDDVVYVIDSGLVKEKSYDPERKVSCLLLSWVSKA 520
Query: 328 NYIHRIGRTGRAGRHGKAFTLVAKED 353
N R GR GR R G + L +
Sbjct: 521 NAKQRRGRAGRV-RPGICYHLYTRSR 545