HHsearch alignment for GI: 254780383 and conserved domain: PRK07956
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=94.01 E-value=0.16 Score=30.95 Aligned_cols=79 Identities=25% Similarity=0.419 Sum_probs=46.5
Q ss_pred HHHHHHHHHCC--CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-------------------------HHHHHHHH
Q ss_conf 79989987317--6200010126899999999730037999999752-------------------------35544420
Q gi|254780383|r 67 NKATKHLFEIA--DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL-------------------------SHILINEF 119 (227)
Q Consensus 67 ~~~~~~L~~~y--pt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~-------------------------a~~i~~~~ 119 (227)
T Consensus 455 ~~~i~~L~~~g~i~~~~Diy~L~~~~L~~l---~gfgeKsa~nLl~aIe~SK~~~l~r~L~ALGI~~VG~~~Ak~La~~f 531 (668)
T PRK07956 455 EKIIEQLFEKGLIHTPADLFKLTEEDLLQL---EGFGEKSAQNLLDAIEKSKETPLARFLYALGIRHVGEKAAKALARHF 531 (668)
T ss_pred HHHHHHHHHCCCCCCHHHHHCCCHHHHHCC---CCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 999999987687665899972885454021---23556699999999998547758889986278641299999999996
Q ss_pred CC--C-CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01--0-00014567776432358888999987
Q gi|254780383|r 120 DN--K-IPQTLEGLTRLPGIGRKGANVILSMA 148 (227)
Q Consensus 120 ~g--~-vP~~~~~L~~LpGVG~ktA~~il~~~ 148 (227)
T Consensus 532 ~sl~~l~~as~e~L~~I~giG~~~A~si~~ff 563 (668)
T PRK07956 532 GSLEALEAASEEELAAVEGIGEEVAQSIVEFF 563 (668)
T ss_pred CCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 68999970899998576884499999999997