HHsearch alignment for GI: 254780383 and conserved domain: TIGR00588
>TIGR00588 ogg 8-oxoguanine DNA-glycosylase (ogg); InterPro: IPR004577 All proteins in this family for which functions are known are 8-oxo-guanaine DNA glycosylases that function in base excision repair. The enzyme incises DNA at 8-oxoG residues, and excises 7,8-dihydro-8-oxoguanine from damaged DNA. It has beta-lyase activity that nicks DNA 3' to the lesion.; GO: 0008534 oxidized purine base lesion DNA N-glycosylase activity, 0006281 DNA repair, 0005634 nucleus.
Probab=99.76 E-value=1.1e-18 Score=146.41 Aligned_cols=127 Identities=21% Similarity=0.367 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHH---------------HHCCCCCHHHCC------CCHHHHHH---------H
Q ss_conf 78689999999996333203567998998---------------731762000101------26899999---------9
Q gi|254780383|r 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHL---------------FEIADTPQKMLA------IGEKKLQN---------Y 94 (227)
Q Consensus 45 ~~~p~~~LVa~iLs~qT~d~~v~~~~~~L---------------~~~ypt~e~l~~------a~~~el~~---------~ 94 (227)
T Consensus 145 qkdP~EcliSfIcSsNnni~RiTrm~e~lc~~fG~~~~~~dgvtyH~FP~~~~LtgvaeGsledl~~~E~nlPsdfsfn~ 224 (379)
T TIGR00588 145 QKDPFECLISFICSSNNNIARITRMVERLCQAFGPRLITLDGVTYHGFPSLHALTGVAEGSLEDLPEAEANLPSDFSFNH 224 (379)
T ss_pred CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 27871566778875046521254338999986220321224621147987566521210016679998751564346265
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHCCC-C----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q ss_conf 997300-3799999975235544420010-0----------------0014567776432358888999987542-1000
Q gi|254780383|r 95 IRTIGI-YRKKSENIISLSHILINEFDNK-I----------------PQTLEGLTRLPGIGRKGANVILSMAFGI-PTIG 155 (227)
Q Consensus 95 ir~~G~-~~~KAk~I~~~a~~i~~~~~g~-v----------------P~~~~~L~~LpGVG~ktA~~il~~~~~~-p~~~ 155 (227)
T Consensus 225 LR~lG~GY--RA~Yi~~tar~l~ee~~~~nitsdta~LQ~ic~~~~Yedar~~L~~l~GVG~KVADCicLmgl~k~~avP 302 (379)
T TIGR00588 225 LRKLGLGY--RARYIRETARALLEEQGGRNITSDTAWLQQICKDADYEDAREALLELPGVGPKVADCICLMGLDKPQAVP 302 (379)
T ss_pred HHHCCCCC--CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf 75248875--4068999999988412664200235799986066886789999721699970488888865227897101
Q ss_pred CCCHHHHHHHHH-HHHCCC
Q ss_conf 121046787765-654078
Q gi|254780383|r 156 VDTHIFRISNRI-GLAPGK 173 (227)
Q Consensus 156 VDthv~Rv~~Rl-gl~~~~ 173 (227)
T Consensus 303 VDVh~~~Ia~rdy~~sank 321 (379)
T TIGR00588 303 VDVHVRRIAKRDYQWSANK 321 (379)
T ss_pred EHHHHHHHHHHCCCCCCCC
T ss_conf 1156888864403531012