HHsearch alignment for GI: 254780383 and conserved domain: cd00056
>cd00056 ENDO3c endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases.
Probab=100.00 E-value=1.5e-35 Score=260.05 Aligned_cols=153 Identities=39% Similarity=0.629 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCC-CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---H
Q ss_conf 99999999963332035679989987317-6200010126899999999730037999999752355444200100---0
Q gi|254780383|r 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI---P 124 (227)
Q Consensus 49 ~~~LVa~iLs~qT~d~~v~~~~~~L~~~y-pt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~a~~i~~~~~g~v---P 124 (227)
T Consensus 1 f~~Li~~Il~qq~s~~~a~~~~~~l~~~~~pt~~~l~~~~~~~l~~~~~~~g-y~~Ka~~i~~~a~~i~~~~~~~~~~~~ 79 (158)
T cd00056 1 FEVLVSEILSQQTTDKAVNKAYERLFERYGPTPEALAAADEEELRELIRSLG-YRRKAKYLKELARAIVEGFGGLVLDDP 79 (158)
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 9999999998145299999999999985499899998099999999973356-899999999988888986089578988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC-CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 01456777643235888899998754210001210467877656540-7888999999962188422678999999996
Q gi|254780383|r 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202 (227)
Q Consensus 125 ~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~-~~~~~~~~~~l~~~~p~~~~~~~~~~li~~G 202 (227)
T Consensus 80 ~~~~~L~~l~GIG~~TA~~vl~~~~~~~~~~vD~~v~R~~~rl~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~L~~~g 158 (158)
T cd00056 80 DAREELLALPGVGRKTANVVLLFALGPDAFPVDTHVRRVLKRLGLIPKKKTPEELEELLEELLPKPYWGEANQALMDLG 158 (158)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 8999987589828999999999987998362259999999995787789999999999998589201999999998676