HHsearch alignment for GI: 254780383 and conserved domain: pfam00633

>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.

Probab=97.34  E-value=6.5e-05  Score=53.77  Aligned_cols=29  Identities=45%  Similarity=0.702  Sum_probs=26.3

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             00100001456777643235888899998
Q gi|254780383|r  119 FDNKIPQTLEGLTRLPGIGRKGANVILSM  147 (227)
Q Consensus       119 ~~g~vP~~~~~L~~LpGVG~ktA~~il~~  147 (227)
T Consensus         2 ~~~~~~as~eeL~~lpGVG~~tA~~I~~~   30 (30)
T pfam00633         2 LEGLIPASREELLALPGVGPKTAEAILSY   30 (30)
T ss_pred             CCCCCCCCHHHHHHCCCCCHHHHHHHHCC
T ss_conf             64435235999972889776889988539