HHsearch alignment of GI: 254780383 and MMDB domain: 1cuk_A_66-144

>1cuk_A (A:66-144) RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli}

Probab=92.83  E-value=0.21  Score=29.70  Aligned_cols=54  Identities=28%  Similarity=0.345  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHHHHHHHHH--HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9973003799999975235--54442001000014567776432358888999987542
Q gi|254780383|r   95 IRTIGIYRKKSENIISLSH--ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI  151 (227)
Q Consensus        95 ir~~G~~~~KAk~I~~~a~--~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~  151 (227)
                      +.-.|.-...|-.|.....  .+.+   -..-.|.+.|.++||||+|||.-|....-++
T Consensus        11 ~~V~GIGpk~Al~iLs~~~~~el~~---aI~~~D~~~L~~ipGIG~KtAerii~eLk~K   66 (79)
T 1cuk_A           11 IKTNGVGPKLALAILSGMSAQQFVN---AVEREEVGALVKLPGIGKKTAERLIVEMKDR   66 (79)
T ss_dssp             HHSSSCCHHHHHHHHHHSCHHHHHH---HHHTTCHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHCCCCHHHHHH---HHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             3478848999999975799999999---9992899998419998899999999999988