HHsearch alignment of GI: 254780383 and MMDB domain: 1kea_A_1-28_140-221
>1kea_A (A:1-28,A:140-221) Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation, base twisting, hydrolase; 2.00A {Methanothermobacterthermautotrophicus}
Probab=99.76 E-value=1.1e-18 Score=146.00 Aligned_cols=86 Identities=22% Similarity=0.367 Sum_probs=73.4
Q ss_pred HHHHHHHH----HHHHHHCCCHHHHHHHHHHHHCCCC----HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 89999875----4210001210467877656540788----899999996218842267899999999665164899894
Q gi|254780383|r 142 NVILSMAF----GIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213 (227)
Q Consensus 142 ~~il~~~~----~~p~~~VDthv~Rv~~Rlgl~~~~~----~~~~~~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C 213 (227)
+.||.|-- +.|+|+|||||+||++|+|+++.++ ..+++..+.+++|.+.|.+||++||+||+.+|++++|+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~VDtnv~RV~~Rl~~v~~~~~~~~~~~l~~~~~~~lp~~~~~~~h~aLi~lG~~vC~~k~P~C 93 (110)
T 1kea_A 14 STILTFWNTDRRDFPAAMVDANFVRVINRYFGGSYENLNYNHKALWELAETLVPGGKCRDFNLGLMDFSAIICAPRKPKC 93 (110)
T ss_dssp HHHHHHHHHSCCCCGCCCCCHHHHHHHHHHHCGGGTTCCTTSHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTSCSSSCCG
T ss_pred HHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999998669999930224388878998637788982166999999998628813299999999998588603989999
Q ss_pred CCCCCHHHCHHHCC
Q ss_conf 72840331768519
Q gi|254780383|r 214 QSCIISNLCKRIKQ 227 (227)
Q Consensus 214 ~~C~l~~~C~~~k~ 227 (227)
++|||++.|+||++
T Consensus 94 ~~CPL~~~C~~~~~ 107 (110)
T 1kea_A 94 EKCGMSKLCSYYEK 107 (110)
T ss_dssp GGCTTTTTCHHHHT
T ss_pred CCCCCCCCCCCCCC
T ss_conf 88989101937277