HHsearch alignment of GI: 254780383 and MMDB domain: 1pu6_A_23-145
>1pu6_A (A:23-145) 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori}
Probab=99.89 E-value=1.4e-23 Score=179.04 Aligned_cols=110 Identities=25% Similarity=0.319 Sum_probs=104.5
Q ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-------CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77786899999999963332035679989987317-------62000101268999999997300379999997523554
Q gi|254780383|r 43 LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-------DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115 (227)
Q Consensus 43 l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~y-------pt~e~l~~a~~~el~~~ir~~G~~~~KAk~I~~~a~~i 115 (227)
..-+|||+.||++||||||+++++.+++.+|+++| |||+++++++++++.++|+++||++.||++|+++++.+
T Consensus 3 ~~~~d~fe~Li~~il~qq~~~~~a~~~~~~l~~~~g~~~~~~pt~~~l~~~~~~~l~~~i~~~g~~~~ka~~i~~~a~~~ 82 (123)
T 1pu6_A 3 WPNALKFEALLGAVLTQNTKFEAVLKSLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSGNI 82 (123)
T ss_dssp STTTTSHHHHHHHHHTTTSCHHHHHHHHHHHHHTTSSCSCHHHHHHHHHHSCHHHHHHHTGGGSCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99998799999999946698999999999999987520124899999977999999999998799589999999999999
Q ss_pred HHHHCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 442001----0000145677764323588889999875421
Q gi|254780383|r 116 INEFDN----KIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152 (227)
Q Consensus 116 ~~~~~g----~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p 152 (227)
.++++| ..|+.+++|.+|||||+|||+++|+|++|+|
T Consensus 83 ~~~~~~l~~~~~~~~~~~L~~l~GIG~~tA~~illf~l~~P 123 (123)
T 1pu6_A 83 LKDFQSFENFKQEVTREWLLDQKGIGKESADAILCYACAKE 123 (123)
T ss_dssp HHHHSSHHHHHHHCCHHHHHTSTTCCHHHHHHHHHHTTCCS
T ss_pred HHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
T ss_conf 98663103799467999998489966999999999987998