HHsearch results for GI: 254780383 and protein with PDBid: 1cuk_A
>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli} SCOP: a.5.1.1 a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A
Probab=92.15 E-value=0.19 Score=28.98 Aligned_cols=70 Identities=21% Similarity=0.207 Sum_probs=43.8
Q ss_pred CCHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2000101268999999997-300379999997523--554442001000014567776432358888999987542
Q gi|254780383|r 79 TPQKMLAIGEKKLQNYIRT-IGIYRKKSENIISLS--HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151 (227)
Q Consensus 79 t~e~l~~a~~~el~~~ir~-~G~~~~KAk~I~~~a--~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~ 151 (227)
+...+.+..+.++-..+.. .|--...|-.|.... ..+.+ -..-.|.+.|.++||||+|||.-|++..-++
T Consensus 59 ~LyGF~~~~Er~lF~~Li~VsGIGPK~AL~ILs~~~~~~l~~---aI~~~D~~~L~~vpGIGkKtA~rIilELkdK 131 (203)
T 1cuk_A 59 LLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVN---AVEREEVGALVKLPGIGKKTAERLIVEMKDR 131 (203)
T ss_dssp EEEEESSHHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHH---HHHTTCHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH---HHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 688619469999999985768857566888861279899999---9871899886069987799999999999999