HHsearch results for GI: 254780383 and protein with PDBid: 1m3q_A
>1m3q_A 8-oxoguanine DNA glycosylase; DNA repair, END product, HOGG, 8-aminoguanine, RE-ligation, hydrolase/DNA complex; HET: DRZ ANG; 1.90A {Homo sapiens} SCOP: a.96.1.3 d.129.1.2 PDB: 1m3h_A* 1n39_A* 1lwy_A* 1hu0_A* 1lwv_A* 1lww_A* 1fn7_A* 1n3a_A* 1n3c_A* 1ebm_A* 1ko9_A 2noe_A* 2noh_A* 2nol_A* 3ktu_A* 1yqk_A 2noz_A* 2nof_A* 1yqr_A* 1yql_A* ...
Probab=99.85 E-value=5e-21 Score=160.84 Aligned_cols=135 Identities=18% Similarity=0.283 Sum_probs=111.5
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC---------------CCCCHHHCCCCHHHH
Q ss_conf 99999999767999877778689999999996333203567998998731---------------762000101268999
Q gi|254780383|r 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI---------------ADTPQKMLAIGEKKL 91 (227)
Q Consensus 27 ~I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~---------------ypt~e~l~~a~~~el 91 (227)
.++..+.+.|+..+. +. .|||+.||+.|+|||.+.....+...+|.++ ||+|++|+++++++
T Consensus 110 ~~l~~~i~~~~GlRi-lr-qdpfE~Lv~~I~sQq~si~~a~~~~~~L~~~~G~~~~~~~~~~~~~FPtp~~L~~~~~e~- 186 (317)
T 1m3q_A 110 SHFQEVAQKFQGVRL-LR-QDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEA- 186 (317)
T ss_dssp HHHHHHHHHSTTCCC-CC-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCEEEEETTEEEECCCCHHHHTSTTHHH-
T ss_pred HHHHHHHHHCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHH-
T ss_conf 689999997699736-68-987999999999988339999999999999829987787864214789999997368899-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHH
Q ss_conf 99999730037999999752355444200100----------00145677764323588889999875421-00012104
Q gi|254780383|r 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKI----------PQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHI 160 (227)
Q Consensus 92 ~~~ir~~G~~~~KAk~I~~~a~~i~~~~~g~v----------P~~~~~L~~LpGVG~ktA~~il~~~~~~p-~~~VDthv 160 (227)
.++.+|+. .||++|+++|+.+.+..+|.. ++.+++|++|||||+|||++||+|++|++ +||||+||
T Consensus 187 --~lr~~g~g-~Ra~~i~~~a~~~~~~~~g~~~l~~l~~~~~~e~~~~L~~l~GIG~wtAd~ilLf~lg~~dafPvD~~v 263 (317)
T 1m3q_A 187 --HLRKLGLG-YRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVEVHM 263 (317)
T ss_dssp --HHHHTTCT-THHHHHHHHHHHHHHTSCSHHHHHHTTTSCHHHHHHHHTTSTTCCHHHHHHHHHHHSCCTTCCCCSHHH
T ss_pred --HHHHCCCH-HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHH
T ss_conf --99862636-899999999999985344404699885355799999998548948899999999857999867752999
Q ss_pred HHHHHHH
Q ss_conf 6787765
Q gi|254780383|r 161 FRISNRI 167 (227)
Q Consensus 161 ~Rv~~Rl 167 (227)
+|++.|+
T Consensus 264 ~r~~~~~ 270 (317)
T 1m3q_A 264 WHIAQRD 270 (317)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999997