HHsearch results for GI: 254780383 and protein with PDBid: 2h56_A
>2h56_A DNA-3-methyladenine glycosidase; 10174367, EC 3.2.2.-, structural genomics, PSI-2, protein structure initiative; 2.55A {Bacillus halodurans}
Probab=99.77 E-value=5.1e-18 Score=140.57 Aligned_cols=156 Identities=15% Similarity=0.158 Sum_probs=120.8
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH----CCCCCHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999976799987777868999999999633320356799899873----176200010126899999999730037
Q gi|254780383|r 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE----IADTPQKMLAIGEKKLQNYIRTIGIYR 102 (227)
Q Consensus 27 ~I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~----~ypt~e~l~~a~~~el~~~ir~~G~~~ 102 (227)
..+..+.+.+|..+.+.. .|||+.||..|++||-+.+.+..++.+|.. .+|+|+.++.+++++ ++.+|+.+
T Consensus 31 ~~L~~~i~~~~~lr~p~~-~d~Fe~Lv~~Ii~QQiS~~aA~ti~~Rl~~~~G~~~p~p~~l~~~~~~~----Lr~~Gls~ 105 (233)
T 2h56_A 31 SRLFQFIEIAGEVQLPTK-PNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGALEKPEQLYRVSDEA----LRQAGVSK 105 (233)
T ss_dssp HHHHHHHHHHCCEEEECC-SCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSCCCCTHHHHTSCHHH----HHHTTCCH
T ss_pred HHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHH----HHHCCCCH
T ss_conf 899999998599867898-9989999999981831499999999999999489999968886299999----97779978
Q ss_pred HHHHHHHHHHHHHHHHHCC-----CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHC-CCHHHHHHHHHHHHCCC
Q ss_conf 9999997523554442001-----00--00145677764323588889999875421-0001-21046787765654078
Q gi|254780383|r 103 KKSENIISLSHILINEFDN-----KI--PQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGV-DTHIFRISNRIGLAPGK 173 (227)
Q Consensus 103 ~KAk~I~~~a~~i~~~~~g-----~v--P~~~~~L~~LpGVG~ktA~~il~~~~~~p-~~~V-Dthv~Rv~~Rlgl~~~~ 173 (227)
+|+++|+.+++.+.+.... .. .+.+++|++++|||++||+++|+|++|+| +||+ |.++.|.+.++.-.+..
T Consensus 106 ~K~~~i~~la~~~~~g~~~~~~l~~~~~~e~~~~L~~ikGIGpWTA~~illf~lgr~DvfP~~Dl~l~ra~~~ly~~~~~ 185 (233)
T 2h56_A 106 RKIEYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQWTAEMFMMFSLGRLDVLSVGDVGLQRGAKWLYGNGEG 185 (233)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHTTSCHHHHHHHHHTSTTCCHHHHHHHHHHTTCCSCCCCTTCHHHHHHHHHHHSSSCS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 78999999999998177520010126888999998806884878999999996899978986379999999998288889
Q ss_pred -CHHHHHHHHHHCCC
Q ss_conf -88999999962188
Q gi|254780383|r 174 -TPNKVEQSLLRIIP 187 (227)
Q Consensus 174 -~~~~~~~~l~~~~p 187 (227)
+..+++...+.+-|
T Consensus 186 ~~~~~~~~~ae~w~P 200 (233)
T 2h56_A 186 DGKKLLIYHGKAWAP 200 (233)
T ss_dssp CHHHHHHHHHGGGTT
T ss_pred CCHHHHHHHHHCCCC
T ss_conf 989999999872788