HHsearch results for GI: 254780383 and protein with PDBid: 3i0w_A
>3i0w_A 8-oxoguanine-DNA-glycosylase; OGG, cacogg, DNA, 8-OXOG, 8OXOG, glycosylase, cytosine, hydrolase,lyase/DNA complex; HET: 8OG; 1.73A {Clostridium acetobutylicum} PDB: 3i0x_A* 3f10_A* 3f0z_A
Probab=99.87 E-value=3.8e-21 Score=161.60 Aligned_cols=168 Identities=15% Similarity=0.116 Sum_probs=130.2
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--------------CCCCHHHCCCCHHHHHH
Q ss_conf 9999999767999877778689999999996333203567998998731--------------76200010126899999
Q gi|254780383|r 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--------------ADTPQKMLAIGEKKLQN 93 (227)
Q Consensus 28 I~~~L~~~yp~~~~~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~--------------ypt~e~l~~a~~~el~~ 93 (227)
++..+.+.++..+. +. .|||+.||+.|+|||++...+.+...+|.++ ||+|+.++.++++++
T Consensus 97 ~l~~~~~~~~GlRi-lr-qdpfE~Lv~~I~sQq~si~~a~~~~~~L~~~~G~~~~~~~~~~~~fPtp~~l~~~~~e~l-- 172 (290)
T 3i0w_A 97 LLKKSVDFGEGIRI-LR-QDPFEILLSFIISANNRIPMIKKCINNISEKAGKKLEYKGKIYYAFPTVDKLHEFTEKDF-- 172 (290)
T ss_dssp HHHHHHHHTTTCCC-CC-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCEEEETTEEEECCCCHHHHTTCCHHHH--
T ss_pred HHHHHHHHCCCCCC-CC-CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHH--
T ss_conf 79999996799778-89-986999999999846209999999999999819877877642357899999975999999--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHH
Q ss_conf 9997300379999997523554442001-------0000145677764323588889999875421-0001210467877
Q gi|254780383|r 94 YIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISN 165 (227)
Q Consensus 94 ~ir~~G~~~~KAk~I~~~a~~i~~~~~g-------~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p-~~~VDthv~Rv~~ 165 (227)
+.+|+. .||++|+++|+.+.+.... ..++.+++|++|||||++||++||++++|++ +||||+|++|++.
T Consensus 173 --r~~g~g-~Ra~yI~~~A~~i~~g~~~l~~l~~~~~~e~~~~L~~i~GIG~wtAd~ilLf~lg~~d~fPvD~~i~r~~~ 249 (290)
T 3i0w_A 173 --EECTAG-FRAKYLKDTVDRIYNGELNLEYIKSLNDNECHEELKKFMGVGPQVADCIMLFSMQKYSAFPVDTWVKKAMM 249 (290)
T ss_dssp --HHTTCG-GGHHHHHHHHHHHHTTSSCHHHHHHSCHHHHHHHHTTSTTCCHHHHHHHHHHHHCCTTCCCCCHHHHHHHH
T ss_pred --HHCCHH-HHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
T ss_conf --862759-89999999999884385228887437706799999867994889999999996799996763499999999
Q ss_pred HHHHHCCCCHHHHHHHHHHCCCHHHHHHH-HHHHHHHHHH
Q ss_conf 65654078889999999621884226789-9999999665
Q gi|254780383|r 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNA-HYWLVLHGRY 204 (227)
Q Consensus 166 Rlgl~~~~~~~~~~~~l~~~~p~~~~~~~-~~~li~~G~~ 204 (227)
+++..+..+..++...+.+.+.+ |..+ ++.|-.|+|+
T Consensus 250 ~~y~~~~~~~~~~~~~~~e~~gp--y~g~A~~yLf~~~R~ 287 (290)
T 3i0w_A 250 SLYVAPDVSLKKIRDFGREKFGS--LSGFAQQYLFYYARE 287 (290)
T ss_dssp HHTSCTTCCHHHHHHHHHHHHGG--GHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCCC--HHHHHHHHHHHHHHH
T ss_conf 96599999999999999986325--899999999996664