HHSEARCH alignment of GI: 254780383 and SCOP domain: d1kg2a_

Alignment
>d1kg2a_ a.96.1.2 (A:) Catalytic domain of MutY {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=385.00  Aligned_cols=201  Identities=17%  Similarity=0.242  Sum_probs=179.3

Q ss_pred             HHHHHHHHHHCCC-CCC---CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999997679-998---777786899999999963332035679989987317620001012689999999973003
Q gi|254780383|r   26 EEIFYLFSLKWPS-PKG---ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY  101 (227)
Q Consensus        26 ~~I~~~L~~~yp~-~~~---~l~~~~p~~~LVa~iLs~qT~d~~v~~~~~~L~~~ypt~e~l~~a~~~el~~~ir~~G~~  101 (227)
                      +.+...|..||.. .+.   |+..+|||++||++||||||+|++|++++++||++||||++++++++++|+++|+++|||
T Consensus         4 ~~~~~~ll~w~~~~~~~~lPWr~~~~p~~vlvs~iLsqqT~~~~v~~~~~~l~~~~pt~~~la~a~~~~l~~~i~~~g~~   83 (224)
T d1kg2a_           4 SQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYY   83 (224)
T ss_dssp             HHHHHHHHHHHHHHCCCCSGGGSSCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCSSHHHHHHSCHHHHHHHHTTSCCT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89999999999981998799898998699999999983090999999999999983439999874189887675313688


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-CHHHHH-
Q ss_conf             799999975235544420010000145677764323588889999875421000121046787765654078-889999-
Q gi|254780383|r  102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVE-  179 (227)
Q Consensus       102 ~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~~~~p~~~VDthv~Rv~~Rlgl~~~~-~~~~~~-  179 (227)
                      + ||++|++++++|+++|+|.+|.++++|++|||||+|||++||+|+||+|+++|||||+||++|+|+..+. +....+ 
T Consensus        84 ~-ka~~l~~~~~~i~~~~~g~vp~~~~~L~~LpGVG~kTA~~il~~a~~~~~~~vD~~v~Rv~~Rl~~~~~~~~~~~~~~  162 (224)
T d1kg2a_          84 A-RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVEN  162 (224)
T ss_dssp             H-HHHHHHHHHHHHHHHSTTSCCCSHHHHHTSTTCCHHHHHHHHHHHHCCSCCCCCHHHHHHHHHHHTCCSCTTSHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf             7-778998755664331158740379999999820144568999876401001114019999889614668765117899


Q ss_pred             ---HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHCC
Q ss_conf             ---999621884226789999999966516489989472840331768519
Q gi|254780383|r  180 ---QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ  227 (227)
Q Consensus       180 ---~~l~~~~p~~~~~~~~~~li~~G~~iC~~~~P~C~~C~l~~~C~~~k~  227 (227)
                         ..+..++|.+.|.++|++||+||+.||++++|+|+.|||++.|++|++
T Consensus       163 ~l~~~~~~~lp~~~~~~~~~~l~~~G~~iC~~~~P~C~~Cpl~~~C~~~~~  213 (224)
T d1kg2a_         163 KLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAAN  213 (224)
T ss_dssp             HHHHHHHHHCCSTTHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHH
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHC
T ss_conf             999875124850022499999999867781289999999969222968666


SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Mismatch glycosylase
domain: Catalytic domain of MutY
species: Escherichia coli [TaxId: 562]