HHSEARCH alignment of GI: 254780383 and SCOP domain: d2bcqa1

Alignment
>d2bcqa1 a.60.6.1 (A:252-327) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.52  E-value=0.073  Score=30.13  Aligned_cols=57  Identities=18%  Similarity=0.324  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999997300379999997523554442001000014567776432358888999987
Q gi|254780383|r   89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA  148 (227)
Q Consensus        89 ~el~~~ir~~G~~~~KAk~I~~~a~~i~~~~~g~vP~~~~~L~~LpGVG~ktA~~il~~~  148 (227)
                      ++|.++..-.| -.-|++.-..++..| +.+...+ .+.++|.+|||||.++|+.|.-+.
T Consensus        10 ~~la~~~~~~g-d~fr~~AY~~A~~~l-~~l~~~i-~~~~~l~~lpGiG~~i~~kI~Eil   66 (76)
T d2bcqa1          10 EVLAKAYSVQG-DKWRALGYAKAINAL-KSFHKPV-TSYQEACSIPGIGKRMAEKIIEIL   66 (76)
T ss_dssp             HHHHHHHHHTT-CHHHHHHHHHHHHHH-HSCCSCC-CCHHHHHTSTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHCC-CHHHHHHHHHHHHHH-HHCCCCC-CCHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             99999998859-828899999999999-8689665-899998448873289999999999


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: DNA polymerase beta, N-terminal domain-like
family: DNA polymerase beta, N-terminal domain-like
domain: DNA polymerase lambda
species: Human (Homo sapiens) [TaxId: 9606]