BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780383|ref|YP_003064796.1| endonuclease III [Candidatus
Liberibacter asiaticus str. psy62]
(227 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|302392095|ref|YP_003827915.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Acetohalobium arabaticum DSM 5501]
gi|302204172|gb|ADL12850.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Acetohalobium arabaticum DSM 5501]
Length = 211
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 134/209 (64%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +E+ EI + + ++P+P+ EL Y F L++A +LSAQ+TD VNK T LF +
Sbjct: 1 MKTEEEINEILRILADEYPAPQTELNYKTPFQLLIATILSAQTTDRQVNKITTELFSKYN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ L + ++L I +G+YR KS+ I+ L++E+D++IP+T E L L G+GR
Sbjct: 61 NPEDFLDLTPEELAEEIHGVGLYRNKSKYILKTCQKLVDEYDSQIPKTREELMELSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+LS AF TI VDTH+FR++NR+G+A + E+ L++ +P +AH+W
Sbjct: 121 KTANVVLSCAFEFDTIAVDTHVFRVTNRLGIANSDNVRRTEEELMKNLPQDKWSSAHHWF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ HGR +CKAR P+C C +++LC K+
Sbjct: 181 IFHGREICKARNPRCGECPVNHLCDYYKE 209
>gi|254780383|ref|YP_003064796.1| endonuclease III [Candidatus Liberibacter asiaticus str. psy62]
gi|254040060|gb|ACT56856.1| endonuclease III [Candidatus Liberibacter asiaticus str. psy62]
Length = 227
Score = 172 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ
Sbjct: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD
Sbjct: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ
Sbjct: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ
Sbjct: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
>gi|328883387|emb|CCA56626.1| Endonuclease III [Streptomyces venezuelae ATCC 10712]
Length = 310
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 124/224 (55%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+K + S + P L + +I + +P EL + N F L+VA +LSAQ+TD
Sbjct: 44 AKPTKSVKPAKPESRLGMVRRARKINRELAEVYPYAHPELDFRNPFELLVATVLSAQTTD 103
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
+ VN+ T LF TP+ + A ++++ IR G +R K+++I+ L+ L ++FD ++
Sbjct: 104 LRVNQTTPALFAKYPTPEDLAAAVPEEVEELIRPTGFFRAKTKSIMGLATALRDDFDGEV 163
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P L+ L +LPG+GRK A V+L AFG+P I VDTH R++ R P K+E +
Sbjct: 164 PGRLDDLVKLPGVGRKTAFVVLGNAFGVPGITVDTHFMRLARRWKWTESDDPVKIEAEVA 223
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I P + ++ HGR +C ARKP C +C I++LC +
Sbjct: 224 TIFPKSEWTMLSHRVIFHGRRICHARKPACGACPIAHLCPAYGE 267
>gi|254433236|ref|ZP_05046744.1| endonuclease III [Nitrosococcus oceani AFC27]
gi|207089569|gb|EDZ66840.1| endonuclease III [Nitrosococcus oceani AFC27]
Length = 223
Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 147/209 (70%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E++EIF F P P EL + F L++AV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MKKNAEIQEIFSRFQAANPKPTTELKHQTPFELLIAVILSAQATDKGVNKATAQLFPVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +GE+ L++YI+TIG++ K++NI+ +L+ + ++P L L G+GR
Sbjct: 61 TPQAILDLGEEGLKHYIKTIGLFNSKAKNILQTCRLLLEQHGGQVPSDRVALEALAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR++NRIGLA GKTP +VE +L R++P + ++AH+WL
Sbjct: 121 KTANVMLNTAFGQPTIAVDTHIFRVANRIGLASGKTPRQVEDTLTRVVPDEFLHDAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRYVC AR P+CQ C+I++LC +
Sbjct: 181 ILHGRYVCTARNPRCQECLINDLCDYYSK 209
>gi|292492759|ref|YP_003528198.1| endonuclease III [Nitrosococcus halophilus Nc4]
gi|291581354|gb|ADE15811.1| endonuclease III [Nitrosococcus halophilus Nc4]
Length = 223
Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 148/209 (70%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E+ EIF F P P EL + F L+VAV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MKNSAEIHEIFSRFQAANPKPTTELKHHTPFELLVAVILSAQATDKGVNKATAKLFPVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +GE+ L+ YI+TIG++ K++NI+ H+L+ D ++P L LPG+GR
Sbjct: 61 TPQAILDLGEEGLKGYIKTIGLFNSKAKNILQTCHLLLEWHDGRVPNDRAALEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG P I VDTHIFR++NRIGLAPGKTP +VE L R+IP + +++AH+WL
Sbjct: 121 KTANVMLNTAFGQPVIAVDTHIFRVANRIGLAPGKTPRQVEDILTRVIPDEFKHDAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRYVC AR P+CQ C+I++LC ++
Sbjct: 181 ILHGRYVCTARNPRCQDCLINDLCDYYQK 209
>gi|285018754|ref|YP_003376465.1| endonuclease III protein [Xanthomonas albilineans GPE PC73]
gi|283473972|emb|CBA16473.1| probable endonuclease III protein [Xanthomonas albilineans]
Length = 229
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 156/227 (68%), Gaps = 4/227 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M +S + S +G G +E+ E+F + P+P EL Y F L++AV+LSAQ
Sbjct: 1 MSASTSTRSARG----GRTLRKEEIHEMFSRLAALNPTPTTELQYSTPFELLIAVILSAQ 56
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ L+ +A+TP +LA+GE+ L+ YI TIG++ K++N+I+ IL+ ++
Sbjct: 57 ATDVGVNKATRRLYPVANTPATILALGEEGLKRYISTIGLFNAKAKNVIATCRILVEQYG 116
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ + L LPG+GRK ANV+L+ FG PT+ VDTHIFR++NR GLAPGK VE
Sbjct: 117 EQVPRERDALEALPGVGRKTANVVLNTTFGEPTMAVDTHIFRVANRTGLAPGKDVRAVED 176
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LL+ +P + Y+AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 177 ALLKRVPAQFLYDAHHWLILHGRYVCKARKPDCPQCVIRDLCRFKDK 223
>gi|260905496|ref|ZP_05913818.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Brevibacterium linens BL2]
Length = 246
Score = 167 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 121/224 (54%), Gaps = 3/224 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ K + + + LG + +I + + +P+ K EL + F L++A +LSAQ+
Sbjct: 4 VAEKSARKFAKETSLG---KTRRARKIHRILAEVYPNAKCELDFETPFQLLIATVLSAQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD+ VN T LF + + +++ I + G YR K+ NI+ L++ L++ +D
Sbjct: 61 TDIRVNAVTPGLFSVFPDAHSLAVANLIEVEELIHSTGFYRAKARNIVKLANELVDTYDG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P +L+ L +L G+GRK ANV+L AF P + VDTH+ R++ R+G P K E
Sbjct: 121 EVPNSLDRLVKLAGVGRKTANVVLGNAFDTPGLTVDTHMGRLARRLGWTEEDDPVKAEHE 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P K + ++ HGR +C +R+P C +C + LC
Sbjct: 181 IAALFPKKDLTLLSHRVIFHGRRICHSRRPACGACPLMALCPSF 224
>gi|77164677|ref|YP_343202.1| endonuclease III/Nth [Nitrosococcus oceani ATCC 19707]
gi|76882991|gb|ABA57672.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosococcus oceani
ATCC 19707]
Length = 236
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 148/219 (67%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + E++EIF F P P EL + F L++AV+LSAQ+TD VNK
Sbjct: 4 PSAFKNARPSMKKNAEIQEIFSRFQAANPKPTTELKHQTPFELLIAVILSAQATDKGVNK 63
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF +A+TPQ +L +GE+ L++YI+TIG++ K++NI+ +L+ + ++P
Sbjct: 64 ATAQLFPVANTPQAILDLGEEGLKHYIKTIGLFNSKAKNILQTCRLLLEQHGGQVPSDRV 123
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L L G+GRK ANV+L+ AFG PTI VDTHIFR++NRIGLA GKTP +VE +L R++P
Sbjct: 124 ALEALAGVGRKTANVMLNTAFGQPTIAVDTHIFRVANRIGLASGKTPRQVEDTLTRVVPD 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++AH+WL+LHGRYVC AR P+CQ C+I++LC +
Sbjct: 184 EFLHDAHHWLILHGRYVCTARNPRCQECLINDLCDYYSK 222
>gi|302544225|ref|ZP_07296567.1| endonuclease III [Streptomyces hygroscopicus ATCC 53653]
gi|302461843|gb|EFL24936.1| endonuclease III [Streptomyces himastatinicus ATCC 53653]
Length = 266
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 118/224 (52%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
K + + P L + I + +P EL + N F L+VA +LSAQ+TD
Sbjct: 1 MKTVKPAKPSRPESQLALVRRARRINRELADVYPYAHPELDFENPFQLLVATVLSAQTTD 60
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
+ VN+ T LF TP+ M A + L+ IR G +R K+++++ LS L + FD ++
Sbjct: 61 LRVNQTTPALFAAYPTPEDMAAADPEALEQLIRPTGFFRAKAKSLLGLSAALRDRFDGEV 120
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P L+ L LPG+GRK ANV+L AFG+P + VDTH R+ R + P KVE +
Sbjct: 121 PGRLKDLVTLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVRRWKWTDQEDPEKVEAEIA 180
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ P + ++ HGR VC ARKP C +C I+ LC +
Sbjct: 181 ALFPKSEWTMLSHRIIFHGRRVCHARKPACGACPIAPLCPAYGE 224
>gi|311694176|gb|ADP97049.1| endonuclease III [marine bacterium HP15]
Length = 212
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EIF P+P EL Y + F L++AV+LSAQ+TDV VNKAT LF +A+
Sbjct: 1 MNKQKRI-EIFTRLREANPNPTTELNYSSPFELLIAVILSAQATDVGVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +LA+G L+ YI+TIG++ K+EN+I ILI + ++P+ E L LPG+GR
Sbjct: 60 TPEAILALGVDGLKEYIKTIGLFNSKAENVIKTCRILIEKHGGQVPERREDLEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG + VDTHI+R+SNR G+APGK +VE L+R++P + +AH+WL
Sbjct: 120 KTANVVLNTAFGHMAMAVDTHIYRVSNRTGIAPGKNVLEVENRLMRLVPKEFLLDAHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C +CII +LC+ ++
Sbjct: 180 ILHGRYTCTARKPKCGACIIEDLCEFKQK 208
>gi|302535304|ref|ZP_07287646.1| endonuclease III [Streptomyces sp. C]
gi|302444199|gb|EFL16015.1| endonuclease III [Streptomyces sp. C]
Length = 275
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S+KK + + S L + I + +P EL + N F L+VA +LSAQ+T
Sbjct: 10 SAKKPAAAKPESRLAMVR---RARRINRELAEVYPYAHPELDFRNPFELLVATVLSAQTT 66
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D+ VN+ T LF TP+ M ++L+ IR G +R K+++++ LS L ++F +
Sbjct: 67 DLRVNQTTPALFAAYPTPEDMAEAVPEELEEIIRPTGFFRAKAKSLLGLSKALRDDFGGE 126
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P +E L LPG+GRK ANV+L AFG+P I VDTH R+ R + P KVE +
Sbjct: 127 VPGRIEDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRFKWTEQEDPEKVEAEI 186
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I P + +V HGR +C ARKP C +C I+ LC +
Sbjct: 187 CAIFPKSEWTMLSHRVVFHGRRICHARKPACGACPIAPLCPAYGE 231
>gi|120553864|ref|YP_958215.1| endonuclease III [Marinobacter aquaeolei VT8]
gi|120323713|gb|ABM18028.1| endonuclease III [Marinobacter aquaeolei VT8]
Length = 212
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF P+P EL Y F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKEKRTEIFSRLRDANPNPTTELNYSTPFELLIAVILSAQATDVGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G L+ YI+TIG++ K+EN+I ILI + +++P E L LPG+GRK
Sbjct: 61 PEAILALGVDGLKEYIKTIGLFNSKAENVIKTCRILIEKHGSEVPARREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR G+APGK +VE+ LLR++P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKNVLEVEKRLLRLVPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYTCTARKPKCGACIIEDLCEFKQK 208
>gi|319781489|ref|YP_004140965.1| endonuclease III [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167377|gb|ADV10915.1| endonuclease III [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 274
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 123/218 (56%), Positives = 165/218 (75%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ Y+P E++EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+TDV V
Sbjct: 26 AKPRPRPVRRASRYSPAEVKEIFRRFSVQRPEPKGELEHVNAFTLLVAVVLSAQATDVGV 85
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ LF ADTP KMLA+GE ++ YIRTIG++R K++N+I+LS LI + ++P
Sbjct: 86 NKATRALFRAADTPHKMLALGEARVGEYIRTIGLWRNKAKNVIALSQALIRDHGGEVPDN 145
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L +LPG+GRK ANV+L+MAFG T+ VDTHI RI NR+GLAPGKTP +VEQ LL+II
Sbjct: 146 RDELVKLPGVGRKTANVVLNMAFGQHTMAVDTHILRIGNRLGLAPGKTPEQVEQGLLKII 205
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P ++ +AH+WL+LHGRYVCKARKP C +C+I+++CK
Sbjct: 206 PDEYMRHAHHWLILHGRYVCKARKPDCPACVIADICKA 243
>gi|149378176|ref|ZP_01895893.1| endonuclease III [Marinobacter algicola DG893]
gi|149357538|gb|EDM46043.1| endonuclease III [Marinobacter algicola DG893]
Length = 213
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P+P EL Y N F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNKAKRTEIFTRLREANPTPTTELNYANPFELLIAVILSAQATDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G L+ YI+TIG++ K+EN+I LI + ++P E L LPG+GRK
Sbjct: 61 PENILALGVDGLKEYIKTIGLFNSKAENVIKTCRALIEKHGGEVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR G+APGK VE+ L+R++P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPAMAVDTHIFRVSNRTGIAPGKNVLDVEKRLMRLVPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYTCTARKPKCGACIIEDLCEFKQK 208
>gi|302553059|ref|ZP_07305401.1| endonuclease III [Streptomyces viridochromogenes DSM 40736]
gi|302470677|gb|EFL33770.1| endonuclease III [Streptomyces viridochromogenes DSM 40736]
Length = 292
Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 2 VSSKKSDSY-QGNSPLGCLYTP----------KELEEIFYLFSLKWPSPKGELYYVNHFT 50
V++KK+ + +G +P + P + I + +P EL + N F
Sbjct: 12 VATKKATARIKGTAPARTVVHPPGGESRTALVRRARRINRELAEVYPYAHPELDFTNPFQ 71
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
L+VA +LSAQ+TD+ VN+ T LF TP+ + A + ++ +R G +R K++++I
Sbjct: 72 LVVATVLSAQTTDLRVNQTTPALFARYPTPEDLAAANPEDVEEILRPCGFFRAKTKSVIG 131
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
LS L+ +F ++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R
Sbjct: 132 LSKALVEDFGGEVPDRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWQWT 191
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+K+E ++ + P + + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 192 GETDPDKIEAAIGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGE 248
>gi|311897003|dbj|BAJ29411.1| putative DNA glycosylase/AP lyase [Kitasatospora setae KM-6054]
Length = 271
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 119/224 (53%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ K+ P L + I + +P EL + F L+VA +LSAQ+
Sbjct: 1 MAESKAAKAGRKKPETHLGMVRRARRINRELAELYPYAHPELDFDGPFQLLVATVLSAQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD+ VN+ T LF P+ + ++L+ IR G +R K++++I L+ L + +D
Sbjct: 61 TDLRVNQTTPALFAKYPEPEDLAVAVPEELEEIIRPTGFFRAKAKSLIGLAIALRDRYDG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+TLE L LPG+GRK ANV++ AFG I VDTH R++ R G + P KVE
Sbjct: 121 EVPRTLEDLVTLPGVGRKTANVVIGNAFGGAGITVDTHFGRLARRFGWTVEEDPEKVEAD 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ I P + +V HGR VC ARKP C +C I+ LC
Sbjct: 181 VMAIFPKSEWTMLSHRVVFHGRRVCHARKPACGACPIAPLCPSY 224
>gi|88799935|ref|ZP_01115507.1| endonuclease III [Reinekea sp. MED297]
gi|88777366|gb|EAR08569.1| endonuclease III [Reinekea sp. MED297]
Length = 210
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P P+ EL Y F L+VAV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKEKRIEIFSRLRAENPHPETELNYSTPFELLVAVVLSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L++YI+TIG++ K+EN+I L +LI++ ++++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLKDYIKTIGLFNSKAENVIKLCRMLIDQHNSQVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+SNR +APGK +VE+ LLR++P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVSNRTRIAPGKDVLEVEKRLLRLVPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPKCGACLIEDLCEYRQK 208
>gi|166711543|ref|ZP_02242750.1| endonuclease III [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 236
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 146/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 APQATPPARRGSTMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + ++P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEHYGGEVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P I VDTHIFR+SNR GLAPGK VE L+++I
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAIAVDTHIFRVSNRTGLAPGKDVRVVEDRLVKVI 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + Y+AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 183 PAEFLYDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDK 223
>gi|289670056|ref|ZP_06491131.1| endonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 236
Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 147/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 TPQATPPARRGSNMRKPEIQEMFERLRELNPYPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + ++P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGEVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++I
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVI 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + ++AH+WL+LHGRYVCKARKP C SC+I +LC+ +
Sbjct: 183 PAEFLHDAHHWLILHGRYVCKARKPDCPSCVIHDLCRYRDK 223
>gi|300114452|ref|YP_003761027.1| endonuclease III [Nitrosococcus watsonii C-113]
gi|299540389|gb|ADJ28706.1| endonuclease III [Nitrosococcus watsonii C-113]
Length = 223
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 145/209 (69%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++EIF F +P EL Y F L++AV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MKKNADIQEIFSRFRAANANPGTELKYHTPFELLIAVILSAQATDKGVNKATAQLFSVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +GE+ L++YI+TIG++ K++NI+ +L+ ++P L L G+GR
Sbjct: 61 TPQGILDLGEEGLKDYIKTIGLFNSKAKNILQTCRLLLQRHGGQVPHDRAALEALAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR++NR GLA GKTP +VE +L R++P + ++AH+WL
Sbjct: 121 KTANVMLNTAFGQPTIAVDTHIFRVANRTGLASGKTPRQVEDTLTRVVPDEFMHDAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRYVC AR P+CQ C+I++LC +
Sbjct: 181 ILHGRYVCTARNPRCQECLINDLCDYYSK 209
>gi|289663098|ref|ZP_06484679.1| endonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 236
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 147/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 TPQATPPARRGSNMRKPEIQEMFERLRELNPYPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ +D ++P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYDGEVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++I
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVI 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + ++AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 183 PAEFLHDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDK 223
>gi|256786926|ref|ZP_05525357.1| endonuclease [Streptomyces lividans TK24]
Length = 368
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 120/226 (53%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ K+ + + + I + +P EL + N F L+VA +LSAQ+
Sbjct: 99 VAPAKTVAPKPPRGESRTALVRRARRINRELAEVYPYAHPELDFENPFQLVVATVLSAQT 158
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD+ VN+ T LF TP+ + A ++++ +R G +R K++++I LS L +F
Sbjct: 159 TDLRVNQTTPALFAKYPTPEDLAAAVPEEVEEILRPTGFFRAKTKSVIGLSKALTEDFGG 218
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R P+K+E +
Sbjct: 219 EVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEAA 278
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + P + + ++ HGR +C ARKP C +C ++ LC +
Sbjct: 279 VGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPVAPLCPAYGE 324
>gi|294630575|ref|ZP_06709135.1| endonuclease III [Streptomyces sp. e14]
gi|292833908|gb|EFF92257.1| endonuclease III [Streptomyces sp. e14]
Length = 282
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 11/237 (4%)
Query: 2 VSSKKSDSYQGNSPLGCLYTP-----------KELEEIFYLFSLKWPSPKGELYYVNHFT 50
++ K + + SP + + I + +P EL + N F
Sbjct: 1 MTEKATAAVPKASPAKTVAPKPPKGESRTALVRRARRINRELAEVYPYAHPELDFENPFQ 60
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
L+VA +LSAQ+TD+ VN+ T LF TP+ + A + ++ +R G +R K+++++
Sbjct: 61 LLVATVLSAQTTDLRVNQTTPALFARYPTPEDLAAADPEVVEEILRPCGFFRAKTKSVMG 120
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
LS L EF ++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R
Sbjct: 121 LSKALTEEFGGEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWQWT 180
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P K+E ++ + P + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 181 EETDPEKIEAAVGALFPKSDWTMLSHHVIFHGRRICHARKPACGACPIAPLCPAYGE 237
>gi|194365092|ref|YP_002027702.1| endonuclease III [Stenotrophomonas maltophilia R551-3]
gi|194347896|gb|ACF51019.1| endonuclease III [Stenotrophomonas maltophilia R551-3]
Length = 230
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 2/227 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M ++KK+ + + G + ++ E+F P PK EL Y + F L+VAV LSAQ
Sbjct: 1 MATAKKT--ARVPARRGSVMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQ 58
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ LF +A+TP K+LA+GE L+ YI TIG++ K++N+I+ IL+ +
Sbjct: 59 ATDVGVNKATRRLFPVANTPAKILALGEDGLKQYIATIGLFNAKAKNVIATCAILLEKHG 118
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ + L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK +VE
Sbjct: 119 GEVPRDRDALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVREVED 178
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+++IP + +AH+WL+LHGRYVCKARKP C C+I++LC+ ++
Sbjct: 179 KLVKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKEK 225
>gi|148559865|ref|YP_001258197.1| endonuclease III [Brucella ovis ATCC 25840]
gi|225626703|ref|ZP_03784742.1| endonuclease III [Brucella ceti str. Cudo]
gi|148371122|gb|ABQ61101.1| endonuclease III [Brucella ovis ATCC 25840]
gi|225618360|gb|EEH15403.1| endonuclease III [Brucella ceti str. Cudo]
Length = 260
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 22 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 81
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 82 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 141
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 142 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 201
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 202 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 244
>gi|237814635|ref|ZP_04593633.1| endonuclease III [Brucella abortus str. 2308 A]
gi|237789472|gb|EEP63682.1| endonuclease III [Brucella abortus str. 2308 A]
Length = 260
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 22 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 81
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 82 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 141
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 142 EVPGDRDELMKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 201
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 202 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 244
>gi|325964631|ref|YP_004242537.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Arthrobacter phenanthrenivorans Sphe3]
gi|323470718|gb|ADX74403.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Arthrobacter phenanthrenivorans Sphe3]
Length = 273
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 121/225 (53%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S+ ++ S L + I + K+P EL + N F L+VA +LSAQ
Sbjct: 1 MASAGQAAGMPVVSSESVLALKRRARRINRALAEKYPYAHAELDFRNPFELLVATVLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VN+ TK LF+ + + +L+ ++ G +R K+ N+I+L L+++F+
Sbjct: 61 TTDVTVNQVTKVLFQRYPDAKSLAEADPGELEAILKPTGFFRAKARNVIALCTRLVDDFN 120
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+P LE L LPG+GRK ANV+L FGIP I VDTH R++NR G P ++EQ
Sbjct: 121 GVVPGRLEDLVTLPGVGRKTANVVLGNGFGIPGISVDTHFARLANRFGWTQSNDPVQIEQ 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + K + ++ HGR VC ARKP C +C +++ C
Sbjct: 181 DVAELFERKDWTMLSHRVIFHGRRVCHARKPACGACPVASWCPSY 225
>gi|306844432|ref|ZP_07477022.1| endonuclease III [Brucella sp. BO1]
gi|306275245|gb|EFM56995.1| endonuclease III [Brucella sp. BO1]
Length = 248
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSVQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELMKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|21230986|ref|NP_636903.1| endonuclease III [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66769009|ref|YP_243771.1| endonuclease III [Xanthomonas campestris pv. campestris str. 8004]
gi|188992123|ref|YP_001904133.1| Putative endonuclease III [Xanthomonas campestris pv. campestris
str. B100]
gi|21112607|gb|AAM40827.1| endonuclease III [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66574341|gb|AAY49751.1| endonuclease III [Xanthomonas campestris pv. campestris str. 8004]
gi|167733883|emb|CAP52089.1| Putative endonuclease III [Xanthomonas campestris pv. campestris]
Length = 227
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 152/227 (66%), Gaps = 4/227 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S+ + + S L E++E+F P P EL Y F L++AVLLSAQ
Sbjct: 1 MSSALSAPPPRRGSTL----RKPEIQELFARLRELNPHPTTELEYTTPFELLIAVLLSAQ 56
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ +
Sbjct: 57 ATDVGVNKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYG 116
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P L LPG+GRK ANV+L+ AFG PT+ VDTHIFR++NR GLAPGK VE
Sbjct: 117 GEVPHDRAALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVANRTGLAPGKDVRVVED 176
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+++IP + ++AH+WL+LHGRYVCKARKP C +C+I +LC+ +
Sbjct: 177 KLVKVIPAEFLHDAHHWLILHGRYVCKARKPDCPNCVIHDLCRYRDK 223
>gi|16224030|gb|AAL15611.1|AF322256_32 endonuclease/N-glycosylase [Streptomyces antibioticus]
Length = 282
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/219 (33%), Positives = 117/219 (53%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + P L + +I + + +P EL + N F L++A +LSAQ+TD+ VN+
Sbjct: 20 AVKPKQPEPHLAMVRRARKINRILAETYPYAHPELDFENPFQLLIATVLSAQTTDLRVNQ 79
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF TP+ + A + ++ +R G +R K+ ++I LS L +F ++P LE
Sbjct: 80 TTPALFAKYPTPEDLAAANPEGVEEILRPCGFFRAKTRSVIGLSKALTEDFGGEVPGKLE 139
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L +LPG+GRK A V+L AFG P I VDTH R+ R P+K+E + + P
Sbjct: 140 DLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWKWTDETDPDKIEAVVGALFPK 199
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 200 SDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGE 238
>gi|330502366|ref|YP_004379235.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Pseudomonas mendocina NK-01]
gi|328916652|gb|AEB57483.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Pseudomonas mendocina NK-01]
Length = 212
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYSTPFELLVAVTLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I ILI + + +P E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILIEKHGSVVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKNVVEVEKKLLKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C +C I +LC+ +
Sbjct: 181 LHGRYVCTARKPRCGACRIEDLCEYKAK 208
>gi|146306430|ref|YP_001186895.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Pseudomonas mendocina ymp]
gi|145574631|gb|ABP84163.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas mendocina
ymp]
Length = 212
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYSTPFELLVAVTLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I ILI + +++P E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRILIEKHGSQVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKNVVEVEKKLLKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C +C I +LC+ +
Sbjct: 181 LHGRYVCTARKPRCGACRIEDLCEYKAK 208
>gi|70732175|ref|YP_261931.1| endonuclease III [Pseudomonas fluorescens Pf-5]
gi|68346474|gb|AAY94080.1| endonuclease III [Pseudomonas fluorescens Pf-5]
Length = 212
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y + F L++AV+LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PAAIYALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVERHNSEVPQTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR GLAPGK +VE+ L++ +P + ++H+WL+
Sbjct: 121 TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEFLLDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SC I +LC+ ++
Sbjct: 181 LHGRYVCLARKPRCGSCRIEDLCEYKQK 208
>gi|256112669|ref|ZP_05453590.1| endonuclease III [Brucella melitensis bv. 3 str. Ether]
gi|265994111|ref|ZP_06106668.1| endonuclease III [Brucella melitensis bv. 3 str. Ether]
gi|262765092|gb|EEZ11013.1| endonuclease III [Brucella melitensis bv. 3 str. Ether]
Length = 248
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|17988065|ref|NP_540699.1| endonuclease III [Brucella melitensis bv. 1 str. 16M]
gi|225851699|ref|YP_002731932.1| endonuclease III [Brucella melitensis ATCC 23457]
gi|254694957|ref|ZP_05156785.1| endonuclease III [Brucella abortus bv. 3 str. Tulya]
gi|254707144|ref|ZP_05168972.1| endonuclease III [Brucella pinnipedialis M163/99/10]
gi|254709313|ref|ZP_05171124.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|254713265|ref|ZP_05175076.1| endonuclease III [Brucella ceti M644/93/1]
gi|254716382|ref|ZP_05178193.1| endonuclease III [Brucella ceti M13/05/1]
gi|254718380|ref|ZP_05180191.1| endonuclease III [Brucella sp. 83/13]
gi|256030836|ref|ZP_05444450.1| endonuclease III [Brucella pinnipedialis M292/94/1]
gi|256045956|ref|ZP_05448828.1| endonuclease III [Brucella melitensis bv. 1 str. Rev.1]
gi|256060306|ref|ZP_05450479.1| endonuclease III [Brucella neotomae 5K33]
gi|256158865|ref|ZP_05456719.1| endonuclease III [Brucella ceti M490/95/1]
gi|256254242|ref|ZP_05459778.1| endonuclease III [Brucella ceti B1/94]
gi|256264790|ref|ZP_05467322.1| endonuclease III [Brucella melitensis bv. 2 str. 63/9]
gi|260169740|ref|ZP_05756551.1| endonuclease III [Brucella sp. F5/99]
gi|260563238|ref|ZP_05833724.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261215298|ref|ZP_05929579.1| endonuclease III [Brucella abortus bv. 3 str. Tulya]
gi|261218166|ref|ZP_05932447.1| endonuclease III [Brucella ceti M13/05/1]
gi|261221393|ref|ZP_05935674.1| endonuclease III [Brucella ceti B1/94]
gi|261314621|ref|ZP_05953818.1| endonuclease III [Brucella pinnipedialis M163/99/10]
gi|261316823|ref|ZP_05956020.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|261320986|ref|ZP_05960183.1| endonuclease III [Brucella ceti M644/93/1]
gi|261324280|ref|ZP_05963477.1| endonuclease III [Brucella neotomae 5K33]
gi|261759280|ref|ZP_06002989.1| endonuclease III [Brucella sp. F5/99]
gi|265983343|ref|ZP_06096078.1| endonuclease III [Brucella sp. 83/13]
gi|265987893|ref|ZP_06100450.1| endonuclease III [Brucella pinnipedialis M292/94/1]
gi|265992368|ref|ZP_06104925.1| endonuclease III [Brucella melitensis bv. 1 str. Rev.1]
gi|265997354|ref|ZP_06109911.1| endonuclease III [Brucella ceti M490/95/1]
gi|306839612|ref|ZP_07472416.1| endonuclease III [Brucella sp. NF 2653]
gi|306842549|ref|ZP_07475200.1| endonuclease III [Brucella sp. BO2]
gi|17983814|gb|AAL52963.1| endonuclease iii [Brucella melitensis bv. 1 str. 16M]
gi|225640064|gb|ACN99977.1| endonuclease III [Brucella melitensis ATCC 23457]
gi|260153254|gb|EEW88346.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260916905|gb|EEX83766.1| endonuclease III [Brucella abortus bv. 3 str. Tulya]
gi|260919977|gb|EEX86630.1| endonuclease III [Brucella ceti B1/94]
gi|260923255|gb|EEX89823.1| endonuclease III [Brucella ceti M13/05/1]
gi|261293676|gb|EEX97172.1| endonuclease III [Brucella ceti M644/93/1]
gi|261296046|gb|EEX99542.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|261300260|gb|EEY03757.1| endonuclease III [Brucella neotomae 5K33]
gi|261303647|gb|EEY07144.1| endonuclease III [Brucella pinnipedialis M163/99/10]
gi|261739264|gb|EEY27260.1| endonuclease III [Brucella sp. F5/99]
gi|262551822|gb|EEZ07812.1| endonuclease III [Brucella ceti M490/95/1]
gi|263003434|gb|EEZ15727.1| endonuclease III [Brucella melitensis bv. 1 str. Rev.1]
gi|263095199|gb|EEZ18868.1| endonuclease III [Brucella melitensis bv. 2 str. 63/9]
gi|264660090|gb|EEZ30351.1| endonuclease III [Brucella pinnipedialis M292/94/1]
gi|264661935|gb|EEZ32196.1| endonuclease III [Brucella sp. 83/13]
gi|306287405|gb|EFM58885.1| endonuclease III [Brucella sp. BO2]
gi|306405310|gb|EFM61585.1| endonuclease III [Brucella sp. NF 2653]
gi|326408187|gb|ADZ65252.1| endonuclease III [Brucella melitensis M28]
Length = 248
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|326537901|gb|ADZ86116.1| endonuclease III [Brucella melitensis M5-90]
Length = 239
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 128/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 1 MNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 61 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 121 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 181 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 223
>gi|326796156|ref|YP_004313976.1| endonuclease III [Marinomonas mediterranea MMB-1]
gi|326546920|gb|ADZ92140.1| endonuclease III [Marinomonas mediterranea MMB-1]
Length = 211
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P+P EL Y + F L++AVL SAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNKEKRHEIFTRLRAENPNPVTELEYNSPFELLIAVLFSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ ML +G L++YI+TIG++ K+EN I +LI + ++++PQT E L LPG+GRK
Sbjct: 61 PETMLVLGVDGLKSYIKTIGLFNAKAENAIKTCQMLIEQHNSEVPQTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR +APGK +VEQ LLR +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTKIAPGKNVLEVEQKLLRFLPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYICTARKPKCDACIIEDLCEFKEK 208
>gi|23501077|ref|NP_697204.1| endonuclease III [Brucella suis 1330]
gi|161618154|ref|YP_001592041.1| endonuclease III [Brucella canis ATCC 23365]
gi|163842435|ref|YP_001626839.1| endonuclease III [Brucella suis ATCC 23445]
gi|254705343|ref|ZP_05167171.1| endonuclease III [Brucella suis bv. 3 str. 686]
gi|260567197|ref|ZP_05837667.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261756055|ref|ZP_05999764.1| endonuclease III [Brucella suis bv. 3 str. 686]
gi|23346945|gb|AAN29119.1| endonuclease III [Brucella suis 1330]
gi|161334965|gb|ABX61270.1| endonuclease III [Brucella canis ATCC 23365]
gi|163673158|gb|ABY37269.1| endonuclease III [Brucella suis ATCC 23445]
gi|260156715|gb|EEW91795.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745808|gb|EEY33734.1| endonuclease III [Brucella suis bv. 3 str. 686]
Length = 248
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++NII LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNIILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|71735109|ref|YP_273633.1| endonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289626585|ref|ZP_06459539.1| endonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289647569|ref|ZP_06478912.1| endonuclease III [Pseudomonas syringae pv. aesculi str. 2250]
gi|298488742|ref|ZP_07006771.1| Endonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|71555662|gb|AAZ34873.1| endonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298156815|gb|EFH97906.1| Endonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|320327082|gb|EFW83096.1| endonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
gi|330867250|gb|EGH01959.1| endonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330876898|gb|EGH11047.1| endonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
gi|330984845|gb|EGH82948.1| endonuclease III [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 212
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQVAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC ++
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKEK 208
>gi|260460522|ref|ZP_05808773.1| endonuclease III [Mesorhizobium opportunistum WSM2075]
gi|259033627|gb|EEW34887.1| endonuclease III [Mesorhizobium opportunistum WSM2075]
Length = 266
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 122/218 (55%), Positives = 166/218 (76%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + Y+P E+ EIF FS++ P PKGEL ++N FTL+VAV+LSAQ+TD V
Sbjct: 26 AKPRPRPARGSSRYSPAEVHEIFRRFSVQRPEPKGELEHINAFTLLVAVVLSAQATDAGV 85
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ LF+ ADTPQKMLA+GE K+ ++IRTIG++R K++N+I+LS LI + +P
Sbjct: 86 NKATRALFKAADTPQKMLALGEAKVGDHIRTIGLWRNKAKNVIALSEALIRDHGGAVPDD 145
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L +LPG+GRK ANV+L+MAFG T+ VDTHIFRI NR+GLAPGKTP +VE LL+II
Sbjct: 146 RDELVKLPGVGRKTANVVLNMAFGQHTMAVDTHIFRIGNRLGLAPGKTPEQVEHGLLKII 205
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P ++ +AH+WL+LHGRYVCKARKP C +C+I+++CK
Sbjct: 206 PDEYMRHAHHWLILHGRYVCKARKPDCPACVIADICKA 243
>gi|62289142|ref|YP_220935.1| endonuclease III [Brucella abortus bv. 1 str. 9-941]
gi|82699081|ref|YP_413655.1| helix-hairpin-helix DNA-binding domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|189023417|ref|YP_001934185.1| Nth, endonuclease III [Brucella abortus S19]
gi|254690468|ref|ZP_05153722.1| Nth, endonuclease III [Brucella abortus bv. 6 str. 870]
gi|254696588|ref|ZP_05158416.1| Nth, endonuclease III [Brucella abortus bv. 2 str. 86/8/59]
gi|254731501|ref|ZP_05190079.1| Nth, endonuclease III [Brucella abortus bv. 4 str. 292]
gi|256258724|ref|ZP_05464260.1| Nth, endonuclease III [Brucella abortus bv. 9 str. C68]
gi|260546439|ref|ZP_05822179.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756021|ref|ZP_05868369.1| endonuclease III [Brucella abortus bv. 6 str. 870]
gi|260759245|ref|ZP_05871593.1| endonuclease III [Brucella abortus bv. 4 str. 292]
gi|260760967|ref|ZP_05873310.1| endonuclease III [Brucella abortus bv. 2 str. 86/8/59]
gi|260885042|ref|ZP_05896656.1| endonuclease III [Brucella abortus bv. 9 str. C68]
gi|297247558|ref|ZP_06931276.1| endonuclease III [Brucella abortus bv. 5 str. B3196]
gi|62195274|gb|AAX73574.1| Nth, endonuclease III [Brucella abortus bv. 1 str. 9-941]
gi|82615182|emb|CAJ10121.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:Endonuclease III, HhH:Endonuclease III/Nth
[Brucella melitensis biovar Abortus 2308]
gi|189018989|gb|ACD71711.1| Nth, endonuclease III [Brucella abortus S19]
gi|260096546|gb|EEW80422.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669563|gb|EEX56503.1| endonuclease III [Brucella abortus bv. 4 str. 292]
gi|260671399|gb|EEX58220.1| endonuclease III [Brucella abortus bv. 2 str. 86/8/59]
gi|260676129|gb|EEX62950.1| endonuclease III [Brucella abortus bv. 6 str. 870]
gi|260874570|gb|EEX81639.1| endonuclease III [Brucella abortus bv. 9 str. C68]
gi|297174727|gb|EFH34074.1| endonuclease III [Brucella abortus bv. 5 str. B3196]
Length = 248
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELMKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|170720307|ref|YP_001747995.1| endonuclease III [Pseudomonas putida W619]
gi|169758310|gb|ACA71626.1| endonuclease III [Pseudomonas putida W619]
Length = 212
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+G + L YI+TIG+Y K+ N+I +LI ++PQ E L LPG+GRK
Sbjct: 61 PHAIHALGVEGLSEYIKTIGLYNSKARNVIEACRLLIERHGGEVPQNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PT+ VDTHIFR+SNR G+APGKT +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPTMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ ++
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEFKQK 208
>gi|282863662|ref|ZP_06272720.1| endonuclease III [Streptomyces sp. ACTE]
gi|282561363|gb|EFB66907.1| endonuclease III [Streptomyces sp. ACTE]
Length = 287
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 117/219 (53%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + P L + I + +P EL + N F L+VA +LSAQ+TD+ VN+
Sbjct: 28 AKKPAKPESHLAMVRRARRINRELAELYPYAHPELDFRNPFELLVATVLSAQTTDLRVNQ 87
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF TP+ M A +KL+ IR G +R K+ ++ LS +L ++F ++P L
Sbjct: 88 TTPALFAAYPTPEDMAAADPEKLEEIIRPTGFFRAKARSLAGLSTVLRDDFGGEVPGRLA 147
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L +LPG+GRK ANV+L AFG+P + VDTH R+ R + P KVE + I P
Sbjct: 148 DLVKLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVRRWKWTEQEDPEKVEADVAAIFPR 207
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ HGR VC +RKP C +C I+ LC +
Sbjct: 208 SEWTMLSHRVIFHGRRVCHSRKPACGACPIAPLCPAYGE 246
>gi|58582077|ref|YP_201093.1| endonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623982|ref|YP_451354.1| endonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58426671|gb|AAW75708.1| endonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367922|dbj|BAE69080.1| endonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 236
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 146/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 APQATPPARRGSSMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + ++P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLERYGGEVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++I
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRVVEDRLVKVI 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + Y+AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 183 PAQFLYDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDK 223
>gi|257486632|ref|ZP_05640673.1| endonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331010113|gb|EGH90169.1| endonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 212
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ M +G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PQAMYDLGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQVAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC ++
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKEK 208
>gi|294665580|ref|ZP_06730860.1| endonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292604629|gb|EFF48000.1| endonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 236
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 146/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 TPQSTVPARRGSSMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + +P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+SNR GLAPGK VE L++++
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVV 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + ++AH+WL+LHGRYVCKAR+P C C+I +LC+ +
Sbjct: 183 PAEFLHDAHHWLILHGRYVCKARRPDCPGCVIHDLCRYRDK 223
>gi|104780422|ref|YP_606920.1| endonuclease III [Pseudomonas entomophila L48]
gi|95109409|emb|CAK14109.1| endonuclease III [Pseudomonas entomophila L48]
Length = 212
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYSTPFELLIAVILSAQATDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + A+G + L +YI+TIG+Y K++N+I +L+ + D ++PQT E L LPG+GRK
Sbjct: 61 PQAIHALGVEGLSDYIKTIGLYNSKAKNVIETCRLLVEQHDGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGKT +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
>gi|192288777|ref|YP_001989382.1| endonuclease III [Rhodopseudomonas palustris TIE-1]
gi|192282526|gb|ACE98906.1| endonuclease III [Rhodopseudomonas palustris TIE-1]
Length = 261
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 122/226 (53%), Positives = 169/226 (74%), Gaps = 2/226 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
VS+K + S +G SP ++ E++E F F+ P PKGEL ++N FTL+VAV+LSAQ+
Sbjct: 35 VSAKSAPSRRGKSPRR--WSAAEVQEAFSRFAKANPEPKGELEHLNPFTLLVAVVLSAQA 92
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE +++ YI+TIG++R K++N+I+LS LI +F
Sbjct: 93 TDAGVNKATRPLFAVADTPQKMLALGEDRVREYIKTIGLFRTKAKNVIALSQKLITDFGG 152
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P T E L LPG GRK ANV+L+MAFG PT+ VDTH+FR+ NR GLAPG TP VE
Sbjct: 153 EVPNTREALETLPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELE 212
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L R+IP + +AH+WL+LHGRY C ARKP+C+ C+I++LC+ ++
Sbjct: 213 LERVIPAEFMQHAHHWLILHGRYTCLARKPRCEVCLINDLCRWPEK 258
>gi|254391703|ref|ZP_05006900.1| endonuclease III [Streptomyces clavuligerus ATCC 27064]
gi|294813393|ref|ZP_06772036.1| Endonuclease III [Streptomyces clavuligerus ATCC 27064]
gi|197705387|gb|EDY51199.1| endonuclease III [Streptomyces clavuligerus ATCC 27064]
gi|294325992|gb|EFG07635.1| Endonuclease III [Streptomyces clavuligerus ATCC 27064]
Length = 284
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 115/220 (52%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
P L + I + +P EL + N F L+VA +LSAQ+TD+ VN
Sbjct: 19 KVANRTKPESRLAMVRRARRINRELAGVYPYAHPELDFRNPFELLVATVLSAQTTDLRVN 78
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ T LF TP+ + A ++++ IR G +R K+ ++I LS L + F ++P L
Sbjct: 79 QTTPALFAAYPTPEDLAAAVPEEVEEIIRPTGFFRAKTTSLIGLSIGLRDRFGGEVPSRL 138
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
E L LPG+GRK A V+L AFG+P I VDTH R+ R + P KVE + +I P
Sbjct: 139 EDLVSLPGVGRKTAFVVLGNAFGVPGITVDTHFGRLVRRWKWTEQEDPEKVEAEIAKIFP 198
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ HGR +C ARKP C +C I++LC +
Sbjct: 199 KSEWTMLSHRVIFHGRRICHARKPACGACPIAHLCPSYGE 238
>gi|237798780|ref|ZP_04587241.1| endonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021633|gb|EGI01690.1| endonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 212
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +LI + ++PQT E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGLSGYIKTIGLYNSKAKNVIETCRMLIELHNGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKHK 208
>gi|330898582|gb|EGH30001.1| endonuclease III [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330937552|gb|EGH41493.1| endonuclease III [Pseudomonas syringae pv. pisi str. 1704B]
Length = 212
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRLLVELHNGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVERQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKAK 208
>gi|320325635|gb|EFW81697.1| endonuclease III [Pseudomonas syringae pv. glycinea str. B076]
Length = 212
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQVAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPENYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC ++
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKEK 208
>gi|49078760|gb|AAT49817.1| PA3495 [synthetic construct]
Length = 213
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P+ EL Y F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNAAKRAEIFRRLHEDNPEPRTELAYTTPFELLIAVILSAQATDVGVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I ILI + ++P E L LPG+GRK
Sbjct: 61 PEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRILIEKHGGQVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR++NR G+APGK +VE+ LL+ +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVANRTGIAPGKNVLEVEKKLLKFVPREYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKPQC SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYKHK 208
>gi|78047179|ref|YP_363354.1| putative endonuclease III [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78035609|emb|CAJ23284.1| putative endonuclease III [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 236
Score = 162 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 145/221 (65%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 TPQAMVPARRGSSMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + +P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVPHD 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++I
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVI 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + ++AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 183 PAEFLHDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDK 223
>gi|289676761|ref|ZP_06497651.1| endonuclease III [Pseudomonas syringae pv. syringae FF5]
gi|302184713|ref|ZP_07261386.1| endonuclease III [Pseudomonas syringae pv. syringae 642]
gi|330949993|gb|EGH50253.1| endonuclease III [Pseudomonas syringae Cit 7]
gi|330981559|gb|EGH79662.1| endonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 212
Score = 162 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVERQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKAK 208
>gi|256368630|ref|YP_003106136.1| endonuclease III [Brucella microti CCM 4915]
gi|255998788|gb|ACU47187.1| endonuclease III [Brucella microti CCM 4915]
Length = 248
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 170/223 (76%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNTFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|66047115|ref|YP_236956.1| endonuclease III/Nth [Pseudomonas syringae pv. syringae B728a]
gi|63257822|gb|AAY38918.1| Endonuclease III/Nth [Pseudomonas syringae pv. syringae B728a]
gi|330973100|gb|EGH73166.1| endonuclease III [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 212
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVERQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKAK 208
>gi|190573549|ref|YP_001971394.1| putative endonuclease III [Stenotrophomonas maltophilia K279a]
gi|190011471|emb|CAQ45089.1| putative endonuclease III [Stenotrophomonas maltophilia K279a]
Length = 229
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 156/227 (68%), Gaps = 2/227 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M ++KK+ + + G ++ E+F P PK EL Y + F L+VAV LSAQ
Sbjct: 1 MATTKKT--ARAPARRGGTMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQ 58
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ LF +A+TP K+LA+GE+ L+ YI TIG++ K++N+I+ IL+ +
Sbjct: 59 ATDVGVNKATRRLFPVANTPAKILALGEEGLKQYIATIGLFNAKAKNVIATCAILLEKHG 118
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ + L LPG+GRK ANV+L+ AFG P + VDTHIFR+SNR GLAPGK +VE
Sbjct: 119 GEVPRDRDALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVREVED 178
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+++IP + +AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 179 KLVKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKDK 225
>gi|83644714|ref|YP_433149.1| endonuclease III [Hahella chejuensis KCTC 2396]
gi|83632757|gb|ABC28724.1| endonuclease III [Hahella chejuensis KCTC 2396]
Length = 211
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P+P EL Y F L++AV+LSAQ+TDV+VNKAT+ L+ +A+T
Sbjct: 1 MNKQKRAEIFARLKAENPNPTTELEYNTPFELLIAVVLSAQATDVSVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L+ YI+TIG++ K+EN+I ILI++ ++++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLKEYIKTIGLFNSKAENVIKTCKILIDQHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR +APGK +VE L++ +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTNIAPGKNVLEVEHKLMKHVPKEYLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C +C+IS+LC+ ++
Sbjct: 181 LHGRYICTARKPRCGACVISDLCEFKEK 208
>gi|291614853|ref|YP_003525010.1| endonuclease III [Sideroxydans lithotrophicus ES-1]
gi|291584965|gb|ADE12623.1| endonuclease III [Sideroxydans lithotrophicus ES-1]
Length = 210
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + EIF P P EL + + F L+VAV+LSAQ+TD +VN AT+ LF +A+T
Sbjct: 1 MNPAKRREIFLRLQAANPHPTTELEHASPFELLVAVILSAQATDKSVNIATRELFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK L +GE +L+ Y++ IG+Y+ KS++II + IL+ + D ++PQT L LPG+GRK
Sbjct: 61 PQKFLDLGEVELREYVQRIGLYQTKSKHIIQMCRILLEQHDGQVPQTRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR+SNR GLAPGK +VE+ LL+ +P + + +AH+WL+
Sbjct: 121 TANVILNTAFGQPTIAVDTHIFRVSNRTGLAPGKDVTEVEKKLLKFVPDEFKLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYVCQARKPKCGACIIESLCEYKEK 208
>gi|294626327|ref|ZP_06704929.1| endonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292599328|gb|EFF43463.1| endonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 236
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 145/220 (65%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
+ G E++E+F P P EL Y F L++AVLLSAQ+TDV VN
Sbjct: 4 PQTTAPARRGSSMRKPEIQEMFARLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGVN 63
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
KAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + +P
Sbjct: 64 KATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVPHDR 123
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+SNR GLAPGK VE L++++P
Sbjct: 124 AALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVVP 183
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++AH+WL+LHGRYVCKAR+P C C+I +LC+ +
Sbjct: 184 AEFLHDAHHWLILHGRYVCKARRPDCPGCVIHDLCRYRDK 223
>gi|71898694|ref|ZP_00680863.1| Endonuclease III/Nth [Xylella fastidiosa Ann-1]
gi|71731459|gb|EAO33521.1| Endonuclease III/Nth [Xylella fastidiosa Ann-1]
Length = 228
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 144/217 (66%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ G + T E+ E F P P EL Y F L++AV+LSAQ+TD+ VNKAT
Sbjct: 8 KPVMRRGSVMTRAEIREAFVRLQEINPHPTTELKYTTAFELLIAVILSAQATDIGVNKAT 67
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ L+ +A+TPQ +L +GE L+ +I TIG++ K++N+I+ IL+ ++ +P+ L
Sbjct: 68 RRLYPLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQYGGAVPRDRAML 127
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANV+L+ AFG PTI VDTHIFR++NR GLA G VE +LL+ IP +
Sbjct: 128 EALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGLAIGSNVRAVEDALLKRIPQEF 187
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 188 LKDAHHWLILHGRYVCKARKPNCSQCVIADLCRYKDK 224
>gi|152987876|ref|YP_001347018.1| endonuclease III [Pseudomonas aeruginosa PA7]
gi|150963034|gb|ABR85059.1| endonuclease III [Pseudomonas aeruginosa PA7]
Length = 212
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P+ EL Y F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNAAKRAEIFRRLHEDNPEPRTELAYTTPFELLIAVILSAQATDVGVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG++ K++N+I ILI + +++P E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLFNSKAKNVIETCRILIEKHGSQVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PT+ VDTHIFR++NR G+APGK +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPTMAVDTHIFRVANRTGIAPGKNVLEVEKKLLKFVPRDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKPQC SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYRHK 208
>gi|297572248|ref|YP_003698022.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
gi|296932595|gb|ADH93403.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
Length = 226
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 2/225 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
MV +KK+ + P ++ ++I + +P+ L + N F L+VA +LSAQ
Sbjct: 1 MVETKKAR--KPTRPRSLKARREQAQKIINRLAELYPNSHCALEHRNAFELLVATVLSAQ 58
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD VN T +LF P+ M + L++ + +G YR K+ ++ L++ L+ F
Sbjct: 59 TTDARVNSVTPNLFATFPNPETMAKAPLEVLEDILHPLGFYRAKARSLNGLANGLMERFG 118
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P TLE L LPG+GRK ANV+L AFG+P I VDTH+ R+S R P K E
Sbjct: 119 GEVPGTLEELITLPGVGRKTANVVLGNAFGVPGITVDTHVGRLSRRWAWTRETDPVKAEM 178
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L +I+P + ++ HGR VC +RKP C++C +++LC
Sbjct: 179 DLAKILPHSEWTIICHRVIDHGRRVCHSRKPACEACPMTDLCPSF 223
>gi|15598691|ref|NP_252185.1| endonuclease III [Pseudomonas aeruginosa PAO1]
gi|107103025|ref|ZP_01366943.1| hypothetical protein PaerPA_01004094 [Pseudomonas aeruginosa PACS2]
gi|116051512|ref|YP_789652.1| endonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890260|ref|YP_002439124.1| endonuclease III [Pseudomonas aeruginosa LESB58]
gi|254236439|ref|ZP_04929762.1| endonuclease III [Pseudomonas aeruginosa C3719]
gi|254242175|ref|ZP_04935497.1| endonuclease III [Pseudomonas aeruginosa 2192]
gi|296387984|ref|ZP_06877459.1| endonuclease III [Pseudomonas aeruginosa PAb1]
gi|313108859|ref|ZP_07794842.1| endonuclease III [Pseudomonas aeruginosa 39016]
gi|9949641|gb|AAG06883.1|AE004770_8 endonuclease III [Pseudomonas aeruginosa PAO1]
gi|115586733|gb|ABJ12748.1| endonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168370|gb|EAZ53881.1| endonuclease III [Pseudomonas aeruginosa C3719]
gi|126195553|gb|EAZ59616.1| endonuclease III [Pseudomonas aeruginosa 2192]
gi|218770483|emb|CAW26248.1| endonuclease III [Pseudomonas aeruginosa LESB58]
gi|310881344|gb|EFQ39938.1| endonuclease III [Pseudomonas aeruginosa 39016]
Length = 212
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P+ EL Y F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNAAKRAEIFRRLHEDNPEPRTELAYTTPFELLIAVILSAQATDVGVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I ILI + ++P E L LPG+GRK
Sbjct: 61 PEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRILIEKHGGQVPDNREDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR++NR G+APGK +VE+ LL+ +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRQLAMAVDTHIFRVANRTGIAPGKNVLEVEKKLLKFVPREYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKPQC SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYKHK 208
>gi|227823996|ref|YP_002827969.1| putative endonuclease III protein [Sinorhizobium fredii NGR234]
gi|227342998|gb|ACP27216.1| putative endonuclease III protein [Sinorhizobium fredii NGR234]
Length = 317
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 129/226 (57%), Positives = 179/226 (79%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V K + + + + +Y+ ++EEIF FS++ P PKGEL +VN FTL+VAV LSAQ+
Sbjct: 72 VKPKGATAARRATRQRSVYSKADVEEIFRRFSVQRPEPKGELEHVNAFTLLVAVALSAQA 131
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTP+KMLA+GE+KL+++I+TIG+YR K++N+I+LS LI +F
Sbjct: 132 TDAGVNKATRPLFAVADTPEKMLALGEEKLRDHIKTIGLYRNKAKNVIALSERLIADFGG 191
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+P+T E L LPG+GRK ANV+L MAFG TI VDTH+FRI+NRI LAPGKTP++VE
Sbjct: 192 AVPKTREELMTLPGVGRKTANVVLQMAFGQSTIAVDTHLFRIANRIRLAPGKTPDEVEAK 251
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+R+IPPK+ Y+AH+WL+LHGRYVCKAR+P+C+ CII+++CK ++
Sbjct: 252 LMRVIPPKYLYHAHHWLILHGRYVCKARRPECERCIIADICKSPEK 297
>gi|28871291|ref|NP_793910.1| endonuclease III [Pseudomonas syringae pv. tomato str. DC3000]
gi|213970873|ref|ZP_03398996.1| endonuclease III [Pseudomonas syringae pv. tomato T1]
gi|301383776|ref|ZP_07232194.1| endonuclease III [Pseudomonas syringae pv. tomato Max13]
gi|302059916|ref|ZP_07251457.1| endonuclease III [Pseudomonas syringae pv. tomato K40]
gi|302130515|ref|ZP_07256505.1| endonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28854541|gb|AAO57605.1| endonuclease III [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924396|gb|EEB57968.1| endonuclease III [Pseudomonas syringae pv. tomato T1]
gi|330877328|gb|EGH11477.1| endonuclease III [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|331015677|gb|EGH95733.1| endonuclease III [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 212
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ + ++P T E L LPG+GRK
Sbjct: 61 PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPDTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDFKDK 208
>gi|330966555|gb|EGH66815.1| endonuclease III [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 212
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ + ++P T E L LPG+GRK
Sbjct: 61 PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPDTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDFKDK 208
>gi|13472772|ref|NP_104339.1| endonuclease III [Mesorhizobium loti MAFF303099]
gi|14023519|dbj|BAB50125.1| endonuclease III [Mesorhizobium loti MAFF303099]
Length = 238
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 124/214 (57%), Positives = 168/214 (78%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
Y+P E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+TD VNKAT+ L
Sbjct: 1 MRRTPRYSPAEVHEIFRRFSVQRPEPKGELEHVNAFTLLVAVVLSAQATDAGVNKATRAL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F++ADTP+KMLA+GE K+ +YIRTIG++R K++N+I+LS LI + +P + L +L
Sbjct: 61 FKVADTPRKMLALGEAKVGDYIRTIGLWRNKAKNVIALSEALIRDHGGVVPDGRDELVKL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK ANV+L+MAFG T+ VDTHIFRI NR+GLAPGKTP +VEQ LL+IIP ++ +
Sbjct: 121 PGVGRKTANVVLNMAFGQHTMAVDTHIFRIGNRLGLAPGKTPEQVEQGLLKIIPDEYMRH 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
AH+WL+LHGRYVCKARKP C +C+I+++CK ++
Sbjct: 181 AHHWLILHGRYVCKARKPDCPACVIADICKAEEK 214
>gi|332717121|ref|YP_004444587.1| endonuclease III [Agrobacterium sp. H13-3]
gi|325063806|gb|ADY67496.1| endonuclease III [Agrobacterium sp. H13-3]
Length = 260
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 123/226 (54%), Positives = 180/226 (79%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ + S + + + +Y+ EL EIF FS++ P PKGEL + N FTL+VAV LSAQ+
Sbjct: 13 LKKSNATSARRPARVKTIYSKNELNEIFRRFSIQRPEPKGELEHTNPFTLLVAVALSAQA 72
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN+AT+ LF++ADTP+KMLA+GE++L +I+TIG+YR K++N+I+LS +LI+ F
Sbjct: 73 TDVGVNRATRALFKVADTPEKMLALGEEELIGHIKTIGLYRNKAKNVIALSQMLIDNFGG 132
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+T E L LPG+GRK ANV++SMAFG+PT+ VDTH+FRI+NR+ LAPGKTP++VE
Sbjct: 133 EVPRTREELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCLAPGKTPDEVEDR 192
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+RIIP ++ ++AH+WL+LHGRY CKARKP+C+ C+I+++CK ++
Sbjct: 193 LVRIIPEEYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEK 238
>gi|188576314|ref|YP_001913243.1| endonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520766|gb|ACD58711.1| endonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 236
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 146/221 (66%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G E++E+F P P EL Y F L++AVLLSAQ+TDV V
Sbjct: 3 APQATPPARRGSTMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGV 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + ++P
Sbjct: 63 NKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLERYGGEVPHE 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ AFG P I VDTHIFR+SNR GLAPGK VE L++++
Sbjct: 123 RAALEALPGVGRKTANVVLNTAFGEPAIAVDTHIFRVSNRTGLAPGKDVRVVEDRLVKVM 182
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P +Y+AH+WL+LHGRYVCKARKP C C+I +LC+ +
Sbjct: 183 PADFRYDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDK 223
>gi|291438174|ref|ZP_06577564.1| endonuclease [Streptomyces ghanaensis ATCC 14672]
gi|291341069|gb|EFE68025.1| endonuclease [Streptomyces ghanaensis ATCC 14672]
Length = 271
Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 3/227 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTP---KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
K + + P G + I + +P EL + N F L+VA +LSAQ
Sbjct: 1 MKDAPARTVAGPAGNESRTALVRRARRINRELAEVYPYAHPELDFENPFQLVVATVLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD+ VN+ T LF TP+ + A ++++ +R G +R K++++I LS +L+ EF
Sbjct: 61 TTDLRVNQTTPALFAKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSKVLVEEFG 120
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R P+K+E
Sbjct: 121 GEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEA 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ + P + + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 181 AVGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGE 227
>gi|146281590|ref|YP_001171743.1| endonuclease III [Pseudomonas stutzeri A1501]
gi|145569795|gb|ABP78901.1| endonuclease III [Pseudomonas stutzeri A1501]
Length = 212
Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF F P PK EL Y F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNAEKRREIFRRFHENNPEPKTELAYSTPFELLIAVILSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L YIRTIG+Y K++N+I ILI + +++P E L LPG+GRK
Sbjct: 61 PEAIYALGYDGLCEYIRTIGLYPSKAKNVIETCRILIEQHGSQVPDNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR G+APGK +VE+ L+R +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRQFTMAVDTHIFRVSNRTGIAPGKNVLEVERKLIRFVPKEYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKPQC SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYKHK 208
>gi|226944034|ref|YP_002799107.1| endonuclease III/Nth [Azotobacter vinelandii DJ]
gi|226718961|gb|ACO78132.1| endonuclease III/Nth [Azotobacter vinelandii DJ]
Length = 212
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF F P+P EL Y + F L+++V+LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNADKRREIFRRFQEDNPTPTTELLYSSPFELLISVILSAQATDVSVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L++G + L YI++IG++ K++NII ILI + D+++P E L LPG+GRK
Sbjct: 61 PEAILSLGVEGLSEYIKSIGLFNSKAKNIIETCRILIEKHDSQVPDNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR LAPGK +VE+ L+R++P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRHFTMAVDTHIFRVSNRTRLAPGKNVLEVERKLVRLVPKEYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPLCGSCRIEDLCEYKHK 208
>gi|330811337|ref|YP_004355799.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379445|gb|AEA70795.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 212
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y + F L++AV+LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG++ K++N+I +LI +++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLFNSKAKNVIETCRLLIERHGSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR GLAPGK +VE+ L++ +P + ++H+WL+
Sbjct: 121 TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEFLLDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCLARKPRCGSCRIEDLCEYKHK 208
>gi|254521608|ref|ZP_05133663.1| endonuclease III [Stenotrophomonas sp. SKA14]
gi|219719199|gb|EED37724.1| endonuclease III [Stenotrophomonas sp. SKA14]
Length = 230
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 107/227 (47%), Positives = 154/227 (67%), Gaps = 2/227 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M + KK+ + + G + ++ E+F P PK EL Y + F L+VAV LSAQ
Sbjct: 1 MATVKKT--ARAPARRGGVMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQ 58
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ LF +A+TP K+LA+GE L+ YI TIG++ K++N+I+ IL+ +
Sbjct: 59 ATDVGVNKATRRLFPVANTPAKILALGEDGLKQYIATIGLFNAKAKNVIATCAILLQKHG 118
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ + L LPG+GRK ANV+L+ AFG P + VDTHIFR++NR GLAPGK +VE
Sbjct: 119 GEVPRDRDALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVANRTGLAPGKNVREVED 178
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L++ IP + +AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 179 KLVKAIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKDK 225
>gi|239929841|ref|ZP_04686794.1| endonuclease III [Streptomyces ghanaensis ATCC 14672]
Length = 365
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 3/226 (1%)
Query: 5 KKSDSYQGNSPLGCLYTP---KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
K + + P G + I + +P EL + N F L+VA +LSAQ+
Sbjct: 96 KDAPARTVAGPAGNESRTALVRRARRINRELAEVYPYAHPELDFENPFQLVVATVLSAQT 155
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD+ VN+ T LF TP+ + A ++++ +R G +R K++++I LS +L+ EF
Sbjct: 156 TDLRVNQTTPALFAKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSKVLVEEFGG 215
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R P+K+E +
Sbjct: 216 EVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEAA 275
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + P + + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 276 VGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGE 321
>gi|167855491|ref|ZP_02478254.1| putative endonuclease [Haemophilus parasuis 29755]
gi|219870906|ref|YP_002475281.1| endonuclease III [Haemophilus parasuis SH0165]
gi|167853357|gb|EDS24608.1| putative endonuclease [Haemophilus parasuis 29755]
gi|219691110|gb|ACL32333.1| endonuclease III [Haemophilus parasuis SH0165]
Length = 211
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI + P P EL Y N F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNKEKRIEILTRLRNENPHPTTELNYSNPFELLIAVILSAQATDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+Y K+ENII LI + + ++PQT E L L G+GRK
Sbjct: 61 PQAILDLGLDGLKEYIKTIGLYNSKAENIIKTCRDLIEKHNGEVPQTREELEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVSNRTNFAPGKDVVKVEEKLLKVVPDEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|86359261|ref|YP_471153.1| endonuclease III protein [Rhizobium etli CFN 42]
gi|86283363|gb|ABC92426.1| endonuclease III protein [Rhizobium etli CFN 42]
Length = 271
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 123/219 (56%), Positives = 174/219 (79%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + + Y+P E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TD VNK
Sbjct: 32 RRKPAATVKTAYSPAEREEIFRRFSVQRPEPRGELEHTNPFTLLVAVALSAQATDAGVNK 91
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF++ADTPQKML +GE KL++YI+TIG+YR K++N+I+LS +L++EF K+P+ E
Sbjct: 92 ATRALFKVADTPQKMLDLGEDKLRDYIKTIGLYRNKAKNVIALSQMLVDEFAGKVPERRE 151
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPG+TP++VE L++++P
Sbjct: 152 ELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIRLAPGETPDEVEARLMKVVPK 211
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ Y+AH+WL+LHGRY CKAR+P+C+ C+I+++CK ++
Sbjct: 212 HYLYHAHHWLILHGRYTCKARRPECERCVIADICKSPEK 250
>gi|182682132|ref|YP_001830292.1| endonuclease III [Xylella fastidiosa M23]
gi|182632242|gb|ACB93018.1| endonuclease III [Xylella fastidiosa M23]
Length = 228
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 144/217 (66%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ G + T E+ E F P P EL Y F L++AV+LSAQ+TD+ VNKAT
Sbjct: 8 KPVMRRGSVMTRAEIREAFVRLQEINPHPTTELKYTTAFELLIAVILSAQATDIGVNKAT 67
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ L+ +A+TPQ +L +GE L+ +I TIG++ K++N+I+ IL+ ++ +P+ L
Sbjct: 68 RRLYSLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQYGGAVPRDRALL 127
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANV+L+ AFG PTI VDTHIFR++NR GLA G VE +LL+ IP +
Sbjct: 128 EALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGLAIGSNVRAVEDALLKRIPQEF 187
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 188 LKDAHHWLILHGRYVCKARKPNCSQCVIADLCRYKDK 224
>gi|289208896|ref|YP_003460962.1| endonuclease III [Thioalkalivibrio sp. K90mix]
gi|288944527|gb|ADC72226.1| endonuclease III [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E IF P P EL Y F L++AV+LSAQ+TDV VNKAT+ L+ A+T
Sbjct: 1 MNAAKREAIFERLKAANPEPTTELEYNTPFELLIAVILSAQATDVGVNKATRRLYPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G L+ +I+TIG+Y K+EN+I IL+++ ++P+ + L LPG+GRK
Sbjct: 61 PEAILALGLDGLKEHIKTIGLYNAKAENVIKTCRILVDQHGGEVPRDRKSLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG+PTI VDTHIFR++NR GLAPGK +VE+ L+R+ P + +AH+WL+
Sbjct: 121 TANVVLNTAFGVPTIAVDTHIFRVANRTGLAPGKNVLEVEKRLMRLTPKPYLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C I +LC+ +
Sbjct: 181 LHGRYVCKARKPECWRCPIEDLCEYKAK 208
>gi|325918092|ref|ZP_08180250.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas vesicatoria ATCC 35937]
gi|325535715|gb|EGD07553.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas vesicatoria ATCC 35937]
Length = 221
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++E+F P P EL Y F L++AVLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ ++ ++P L LPG+GRK
Sbjct: 61 PRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEQYGGEVPHDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR GLAPGK VE L+++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTMAVDTHIFRVANRTGLAPGKDVRAVEDKLVKVIPTEFLNDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C C+I +LC+ +
Sbjct: 181 LHGRYVCKARKPDCPGCVIHDLCRYRDK 208
>gi|239981048|ref|ZP_04703572.1| putative endonuclease III [Streptomyces albus J1074]
gi|291452913|ref|ZP_06592303.1| endonuclease III [Streptomyces albus J1074]
gi|291355862|gb|EFE82764.1| endonuclease III [Streptomyces albus J1074]
Length = 305
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 112/205 (54%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 60 RRARRINRELAEVYPYAHPELDFENPFQLLVATVLSAQTTDLRVNQTTPALFAAYPTPED 119
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++L+ IR G +R K+ +++ LS L + F ++P L+ L LPG+GRK A
Sbjct: 120 LAAAPPEELEELIRPTGFFRAKARSLLGLSAALRDRFGGEVPGKLDDLVSLPGVGRKTAF 179
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P I VDTH R+ R P KVE ++ I P K + ++ HG
Sbjct: 180 VVLGNAFGVPGITVDTHFGRLVRRWKWTEETDPEKVEAAVAAIFPKKDWTMLSHRVIFHG 239
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C +RKP C +C I+ LC +
Sbjct: 240 RRICHSRKPACGACPIAPLCPSYGE 264
>gi|21221987|ref|NP_627766.1| endonuclease [Streptomyces coelicolor A3(2)]
gi|5139623|emb|CAB45549.1| putative endonuclease [Streptomyces coelicolor A3(2)]
Length = 250
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 114/205 (55%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 2 RRARRINRELAEVYPYAHPELDFENPFQLVVATVLSAQTTDLRVNQTTPALFAKYPTPED 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ +R G +R K++++I LS L +F ++P LE L +LPG+GRK A
Sbjct: 62 LAAAVPEEVEEILRPTGFFRAKTKSVIGLSKALTEDFGGEVPGRLEDLVKLPGVGRKTAF 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG P I VDTH R+ R P+K+E ++ + P + + ++ HG
Sbjct: 122 VVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEAAVGALFPKSDWTDLSHHVIWHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C I+ LC +
Sbjct: 182 RRICHARKPACGACPIAPLCPAYGE 206
>gi|330721048|gb|EGG99197.1| Endonuclease III [gamma proteobacterium IMCC2047]
Length = 211
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P PK EL Y F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNKEKRFEIFSRLRAENPEPKTELNYSTPFELLIAVILSAQATDVGVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+EN+I H+L+ + ++++P T E L LPG+GRK
Sbjct: 61 PEDIAALGVDGLKEYIKTIGLFNSKAENVIKTCHMLVEKHNSQVPSTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR +NR +APGK +VEQ LLR +P + +AH+W++
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRFANRTKVAPGKNVLEVEQKLLRFVPREFLLDAHHWMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C +CII +LC+ +
Sbjct: 181 LHGRYICTARKPRCGACIIEDLCEFKDK 208
>gi|297201324|ref|ZP_06918721.1| endonuclease III [Streptomyces sviceus ATCC 29083]
gi|197712814|gb|EDY56848.1| endonuclease III [Streptomyces sviceus ATCC 29083]
Length = 274
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTP--KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLS 58
M + + P T + I + +P EL + N F LIVA +LS
Sbjct: 1 MKKASATKKVAPKPPRNESQTALVRHARRINRELAEVFPYAHPELDFENPFQLIVATVLS 60
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
AQ+TD+ VN+ T LF TP+ + A ++++ +R G +R K++++I LS L+
Sbjct: 61 AQTTDLRVNQTTPALFAKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSKTLVEN 120
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
F ++P L+ L LPG+GRK A V+L AFG P I VDTH R+ R P+K+
Sbjct: 121 FGGEVPGRLDDLVTLPGVGRKTAFVVLGNAFGRPGITVDTHFMRLVRRWQWTDETDPDKI 180
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
E ++ + P + + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 181 EAAVSALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGE 229
>gi|325275201|ref|ZP_08141168.1| endonuclease III [Pseudomonas sp. TJI-51]
gi|324099688|gb|EGB97567.1| endonuclease III [Pseudomonas sp. TJI-51]
Length = 212
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I +LI +++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHGSQVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PT+ VDTHIFR+SNR G+APGKT +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPTMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
>gi|39933420|ref|NP_945696.1| endonuclease III [Rhodopseudomonas palustris CGA009]
gi|39647266|emb|CAE25787.1| endonuclease III DNA-(apurinic or apyrimidinic site) lyase
[Rhodopseudomonas palustris CGA009]
Length = 261
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 122/226 (53%), Positives = 168/226 (74%), Gaps = 2/226 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
VS+K + S +G SP ++ E+ E F F+ P PKGEL ++N FTL+VAV+LSAQ+
Sbjct: 35 VSAKPAPSRRGKSPRR--WSAAEVHEAFSRFAKANPEPKGELEHLNPFTLLVAVVLSAQA 92
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE +++ YI+TIG++R K++N+I+LS LI +F
Sbjct: 93 TDAGVNKATRPLFAVADTPQKMLALGEDRVREYIKTIGLFRTKAKNVIALSQKLITDFGG 152
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P T E L LPG GRK ANV+L+MAFG PT+ VDTH+FR+ NR GLAPG TP VE
Sbjct: 153 EVPNTREALETLPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELE 212
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L R+IP + +AH+WL+LHGRY C ARKP+C+ C+I++LC+ ++
Sbjct: 213 LERVIPAEFMQHAHHWLILHGRYTCLARKPRCEVCLINDLCRWPEK 258
>gi|313497458|gb|ADR58824.1| Endonuclease III [Pseudomonas putida BIRD-1]
Length = 212
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I +LI D+++PQT E L LPG+GRK
Sbjct: 61 PEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLIERHDSQVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR G+APGKT +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
>gi|224825659|ref|ZP_03698763.1| endonuclease III [Lutiella nitroferrum 2002]
gi|224601883|gb|EEG08062.1| endonuclease III [Lutiella nitroferrum 2002]
Length = 210
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P+P+ EL Y F L++AV+LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNAAKRREIFRRLKELNPAPRTELEYRTPFELLIAVVLSAQATDVGVNKATRLLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +L++GE+ L YI+TIG+YR K++N+I+ +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PAALLSLGEEGLSEYIKTIGLYRTKAKNVIATCRLLLEKHGGEVPQTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG T+ VDTHIFR++NR LAPGK VE L+++IP ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGHATMAVDTHIFRVANRTRLAPGKDVRAVEDKLMKVIPAEYLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKAR+P+C+ C I +LC+
Sbjct: 181 LHGRYTCKARRPECERCPIVDLCEY 205
>gi|28898882|ref|NP_798487.1| endonuclease III [Vibrio parahaemolyticus RIMD 2210633]
gi|260879446|ref|ZP_05891801.1| endonuclease III [Vibrio parahaemolyticus AN-5034]
gi|260897158|ref|ZP_05905654.1| endonuclease III [Vibrio parahaemolyticus Peru-466]
gi|260902705|ref|ZP_05911100.1| endonuclease III [Vibrio parahaemolyticus AQ4037]
gi|28807101|dbj|BAC60371.1| endonuclease III [Vibrio parahaemolyticus RIMD 2210633]
gi|308087156|gb|EFO36851.1| endonuclease III [Vibrio parahaemolyticus Peru-466]
gi|308093526|gb|EFO43221.1| endonuclease III [Vibrio parahaemolyticus AN-5034]
gi|308109012|gb|EFO46552.1| endonuclease III [Vibrio parahaemolyticus AQ4037]
gi|328474559|gb|EGF45364.1| endonuclease III [Vibrio parahaemolyticus 10329]
Length = 213
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKEKRIEILERLRENNPNPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ + L LPG+GRK
Sbjct: 61 PQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRDALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEYKEK 208
>gi|26987828|ref|NP_743253.1| endonuclease III [Pseudomonas putida KT2440]
gi|24982528|gb|AAN66717.1|AE016300_2 endonuclease III [Pseudomonas putida KT2440]
Length = 212
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I +LI D+++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR G+APGKT +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
>gi|320009978|gb|ADW04828.1| endonuclease III [Streptomyces flavogriseus ATCC 33331]
Length = 306
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ + + S + S L + I + +P EL + N F L+VA +LSAQ+T
Sbjct: 44 AKRPAKSAKQESHLAMVR---RARRINRELAEVYPYAHPELDFRNPFELLVATVLSAQTT 100
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D+ VN+ T LF TP+ M A +KL+ IR G +R K+ ++I LS L ++F +
Sbjct: 101 DLRVNQTTPALFAAYPTPEDMAAAVPEKLEEIIRPTGFFRAKARSLIGLSAALRDDFGGE 160
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P L L +LPG+GRK ANV+L AFG+P I VDTH R+ R + P KVE +
Sbjct: 161 VPGRLADLVKLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRWKWTEQEDPEKVEAEI 220
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I P + +V HGR +C +RKP C +C I+ LC +
Sbjct: 221 AAIFPKSEWTMLSHRVVFHGRRICHSRKPACGACPIAGLCPAYGE 265
>gi|15837249|ref|NP_297937.1| endonuclease III [Xylella fastidiosa 9a5c]
gi|9105523|gb|AAF83457.1|AE003909_10 endonuclease III [Xylella fastidiosa 9a5c]
Length = 218
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 142/214 (66%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
G T E+ E F P P EL Y F L++AV+LSAQ+TD+ VNKAT+ L
Sbjct: 1 MRRGSTMTRAEIREAFVRLQEINPHPTTELKYTTPFELLIAVILSAQATDIGVNKATRRL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ +A+TPQ +L +GE L+ +I TIG++ K++N+I+ IL+ ++ +P+ L L
Sbjct: 61 YSLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQYGGAVPRDRAMLEAL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK ANV+L+ AFG PTI VDTHIFR++NR GLA G VE +LL+ IP + +
Sbjct: 121 PGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGLAIGSNVRVVEDALLKRIPQEFLKD 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 181 AHHWLILHGRYVCKARKPNCSQCVIADLCRYKDK 214
>gi|71274517|ref|ZP_00650805.1| Endonuclease III/Nth [Xylella fastidiosa Dixon]
gi|71901744|ref|ZP_00683815.1| Endonuclease III/Nth [Xylella fastidiosa Ann-1]
gi|170730769|ref|YP_001776202.1| endonuclease III [Xylella fastidiosa M12]
gi|71164249|gb|EAO13963.1| Endonuclease III/Nth [Xylella fastidiosa Dixon]
gi|71728484|gb|EAO30644.1| Endonuclease III/Nth [Xylella fastidiosa Ann-1]
gi|167965562|gb|ACA12572.1| endonuclease III [Xylella fastidiosa M12]
Length = 228
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 143/217 (65%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ G T E+ E F P P EL Y F L++AV+LSAQ+TD+ VNKAT
Sbjct: 8 KPVMRRGSAMTRAEIREAFVRLQEINPHPTTELKYTTAFELLIAVILSAQATDIGVNKAT 67
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ L+ +A+TPQ +L +GE L+ +I TIG++ K++N+I+ IL+ ++ +P+ L
Sbjct: 68 RRLYSLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQYGGAVPRDRAML 127
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANV+L+ AFG PT+ VDTHIFR++NR GLA G VE +LL+ IP +
Sbjct: 128 EALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVANRTGLAIGSNVRAVEDALLKRIPQEF 187
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRYVCKARKP C C+I++LC+ +
Sbjct: 188 LKDAHHWLILHGRYVCKARKPNCLQCVIADLCRYKDK 224
>gi|94498908|ref|ZP_01305446.1| endonuclease III [Oceanobacter sp. RED65]
gi|94428540|gb|EAT13512.1| endonuclease III [Oceanobacter sp. RED65]
Length = 211
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 149/208 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P+ EL Y + F L+VAV LSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNKDKRTEIFTRLRDNNPQPETELEYSSPFELLVAVTLSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+GE+ L+ YI+TIG++ K++N++++ IL+ + ++++P+T + L LPG+GRK
Sbjct: 61 PESIYALGEEGLKEYIKTIGLFNSKAKNVVAMCKILMEKHNSQVPETRDELVALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR +APGK +VE+ L+R++P + +AH+WL+
Sbjct: 121 TANVVLNTAFNQIAMAVDTHIFRVSNRTKIAPGKDVLEVEKRLIRLVPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SC I +LC+ ++
Sbjct: 181 LHGRYVCTARKPKCGSCTIEDLCEFKEK 208
>gi|327479768|gb|AEA83078.1| endonuclease III [Pseudomonas stutzeri DSM 4166]
Length = 212
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF F P PK EL Y F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNAEKRREIFRRFHEDNPEPKTELAYSTPFELLIAVILSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L YIRTIG+Y K++N+I ILI + +++P E L LPG+GRK
Sbjct: 61 PEAIYALGYDGLCEYIRTIGLYPSKAKNVIETCRILIEKHGSQVPDNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR G+APGK +VE+ L+R +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFRQFTMAVDTHIFRVSNRTGIAPGKNVLEVERKLIRFVPKEYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKPQC SC I +LC+ +
Sbjct: 181 LHGRYVCKARKPQCGSCRIEDLCEYKHK 208
>gi|167035313|ref|YP_001670544.1| endonuclease III [Pseudomonas putida GB-1]
gi|166861801|gb|ABZ00209.1| endonuclease III [Pseudomonas putida GB-1]
Length = 212
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I +LI +++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHGSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PT+ VDTHI+R+SNR G+APGKT +VE+ L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPTMAVDTHIYRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
>gi|293603974|ref|ZP_06686387.1| endonuclease III [Achromobacter piechaudii ATCC 43553]
gi|292817578|gb|EFF76646.1| endonuclease III [Achromobacter piechaudii ATCC 43553]
Length = 211
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P+P EL Y F L++AVLLSAQ+TD +VN AT+ F T
Sbjct: 1 MNAAKRREIFARLQAANPNPTTELEYDTPFQLLIAVLLSAQATDKSVNIATRKFFPNYGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE+ L +YI+TIG+YR K++N I+ IL+ ++P T E L LPG+GRK
Sbjct: 61 PQALLDLGEEGLSDYIKTIGLYRTKAKNTIATCRILLEHHGGQVPTTREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+SNR G+APGK +VE L++ IP ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVSNRTGIAPGKNVLEVEDKLVKFIPREYIQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C C IS+LC+ ++
Sbjct: 181 LHGRYICVARKPKCPQCGISDLCEFKQK 208
>gi|77460734|ref|YP_350241.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Pseudomonas fluorescens Pf0-1]
gi|77384737|gb|ABA76250.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas fluorescens
Pf0-1]
Length = 212
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y + F L++AV+LSAQSTDV VNKAT LF +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+G + L YI+TIG+Y K++N+I +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PAAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVELHNGEVPQTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR G+APGK +VE+ L++ +P ++ ++H+WL+
Sbjct: 121 TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVVEVEKKLMKFVPKEYLLDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCLARKPRCGSCRIEDLCDYKHK 208
>gi|239943079|ref|ZP_04695016.1| putative endonuclease III [Streptomyces roseosporus NRRL 15998]
gi|239989537|ref|ZP_04710201.1| putative endonuclease III [Streptomyces roseosporus NRRL 11379]
gi|291446555|ref|ZP_06585945.1| endonuclease III [Streptomyces roseosporus NRRL 15998]
gi|291349502|gb|EFE76406.1| endonuclease III [Streptomyces roseosporus NRRL 15998]
Length = 277
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 117/220 (53%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
+ L + I + +P EL + N F L+VA +LSAQ+TD+ VN
Sbjct: 17 PPRKAPKAESHLAMVRRARRINRELAEIYPYAHPELDFRNPFELLVATVLSAQTTDLRVN 76
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ T LF TP+ M A ++++ IR G +R K+++++ LS L +EF ++P L
Sbjct: 77 QTTPALFAAYPTPEDMAAAVPEEMEEIIRPTGFFRAKTKSLLGLSAALRDEFGGEVPGRL 136
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
E L +LPG+GRK ANV+L AFG+P I VDTH R+ R + P KVE + I P
Sbjct: 137 EDLVKLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRWKWTDEEDPVKVEAVVAGIFP 196
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +V HGR +C ARKP C +C I+ LC +
Sbjct: 197 KSEWTMLSHRVVFHGRRICHARKPACGACPIAPLCPSYGE 236
>gi|283457403|ref|YP_003361979.1| putative EndoIII-like endonuclease [Rothia mucilaginosa DY-18]
gi|283133394|dbj|BAI64159.1| predicted EndoIII-related endonuclease [Rothia mucilaginosa DY-18]
Length = 311
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
P L T + +I + +P EL + N F L++A +LSAQ+TDV VN T LF
Sbjct: 54 PESHLATVRRARKINRILGETYPYAVAELDFDNPFELLIATVLSAQTTDVRVNSVTGALF 113
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + ++++ YI+++G YR K+ +I++LS L+ + ++P TLE L L
Sbjct: 114 ARYPDAAALASARTEEVEPYIQSLGFYRAKARSIVTLSQQLVERHNGQVPSTLEELVELA 173
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L AF +P + VDTH R++ R+G P VE+ + +I K
Sbjct: 174 GVGRKTANVVLGNAFDVPGLTVDTHFGRLARRMGFTTADAPETVEKDVAELIERKDWTLF 233
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +V HGR +C A+KP C C +++LC
Sbjct: 234 SHRMVYHGRRICHAKKPACGVCPVADLCPSY 264
>gi|289770819|ref|ZP_06530197.1| endonuclease [Streptomyces lividans TK24]
gi|289701018|gb|EFD68447.1| endonuclease [Streptomyces lividans TK24]
Length = 250
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 114/205 (55%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 2 RRARRINRELAEVYPYAHPELDFENPFQLVVATVLSAQTTDLRVNQTTPALFAKYPTPED 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ +R G +R K++++I LS L +F ++P LE L +LPG+GRK A
Sbjct: 62 LAAAVPEEVEEILRPTGFFRAKTKSVIGLSKALTEDFGGEVPGRLEDLVKLPGVGRKTAF 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG P I VDTH R+ R P+K+E ++ + P + + ++ HG
Sbjct: 122 VVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEAAVGALFPKSDWTDLSHHVIWHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C ++ LC +
Sbjct: 182 RRICHARKPACGACPVAPLCPAYGE 206
>gi|87118389|ref|ZP_01074288.1| endonuclease III [Marinomonas sp. MED121]
gi|86166023|gb|EAQ67289.1| endonuclease III [Marinomonas sp. MED121]
Length = 211
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF + P PK EL Y + F L++AVLLSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNKAKRHEIFSRLRAENPEPKTELEYSSPFELLIAVLLSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG++ K+EN I IL+ + D+ +P T E L LPG+GRK
Sbjct: 61 PQAILDLGVEGLKEYIKTIGLFNAKAENTIKTCRILVEQHDSVVPDTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR NR +APGK +VEQ L++ +P + +AH+W++
Sbjct: 121 TANVVLNTAFRQIAMAVDTHIFRFGNRTKVAPGKDVLEVEQKLMKFVPKEFLLDAHHWMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYICVARKPKCDACLIEDLCEFKEK 208
>gi|255528039|ref|ZP_05394875.1| endonuclease III [Clostridium carboxidivorans P7]
gi|296185709|ref|ZP_06854118.1| endonuclease III [Clostridium carboxidivorans P7]
gi|255508278|gb|EET84682.1| endonuclease III [Clostridium carboxidivorans P7]
gi|296049837|gb|EFG89262.1| endonuclease III [Clostridium carboxidivorans P7]
Length = 212
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K + +I + S +P K L + + + L+++ +LSAQ TDV VN T+ L+E +T
Sbjct: 1 MNKKNVNKILEILSKTYPDAKCALNFKSPYELLISTILSAQCTDVRVNMVTEKLYEKYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ M+ + E++L IR+ G Y+ KS+NI+ + I E K+P T+E L +LPG+GRK
Sbjct: 61 PETMITLTEEELSEKIRSCGFYKNKSKNILGAT-KAILENGGKVPDTMEELLKLPGVGRK 119
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFG+P I VDTH+FR+SNR+G+A G TP +VE+ L++ +P + H++L+
Sbjct: 120 TANVVLSNAFGVPAIAVDTHVFRVSNRLGIAKGDTPEQVEKGLMKNVPRDMWSDTHHYLI 179
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CK+RKP C+ C ++ C+
Sbjct: 180 WHGRLICKSRKPDCEKCPLAPYCEYF 205
>gi|240948721|ref|ZP_04753093.1| endonuclease III [Actinobacillus minor NM305]
gi|257464497|ref|ZP_05628868.1| endonuclease III [Actinobacillus minor 202]
gi|240296937|gb|EER47515.1| endonuclease III [Actinobacillus minor NM305]
gi|257450157|gb|EEV24200.1| endonuclease III [Actinobacillus minor 202]
Length = 211
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y N F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKQKRI-EILTRLRNENPHPTTELNYTNPFELLIAVILSAQATDKGVNKATEKLFAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G + L+ YI+TIG++ K+ENII LI + ++P+ E L L G+GR
Sbjct: 60 TPQAILDLGVEGLKEYIKTIGLFNSKAENIIKTCRDLIEKHQGQVPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|254361075|ref|ZP_04977220.1| DNA-(apurinic or apyrimidinic site) lyase [Mannheimia haemolytica
PHL213]
gi|261493598|ref|ZP_05990118.1| endonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261495436|ref|ZP_05991884.1| endonuclease III [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153092561|gb|EDN73616.1| DNA-(apurinic or apyrimidinic site) lyase [Mannheimia haemolytica
PHL213]
gi|261308941|gb|EEY10196.1| endonuclease III [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310780|gb|EEY11963.1| endonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 210
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y N F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG++ K+ENII LI + + ++P+ + L L G+GRK
Sbjct: 61 PQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPEDRDALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PTI VDTHIFR+SNR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVEEKLLKVVPDEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|300742227|ref|ZP_07072248.1| endonuclease III [Rothia dentocariosa M567]
gi|300381412|gb|EFJ77974.1| endonuclease III [Rothia dentocariosa M567]
Length = 278
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 126/210 (60%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
P L T + +I + +P EL + N F L++A +LSAQ+TDV VN+ T LF
Sbjct: 21 PESHLATVRRARKINRILGETYPYAVAELDFTNAFELLIATVLSAQTTDVRVNQVTPALF 80
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ A E++++ YI+++G YR K+++I+ L+ L +++D ++P TL+ L +L
Sbjct: 81 ARYPDAPALAAATEEEVEPYIQSLGFYRAKAKSIVKLARQLTDDYDGEVPGTLDKLVKLA 140
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L AFG+P + VDTH R++ R+GL P KVE + +I P+ +
Sbjct: 141 GVGRKTANVVLGNAFGVPGLTVDTHFGRLARRMGLTTEDDPVKVEHDVAELIEPREWTDF 200
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ +V HGR +C ARKP C C I++LC
Sbjct: 201 SHRMVYHGRRICHARKPACGVCPIADLCPS 230
>gi|325921126|ref|ZP_08182997.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas gardneri ATCC 19865]
gi|325548398|gb|EGD19381.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas gardneri ATCC 19865]
Length = 236
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 149/215 (69%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ G + E++E+F P P EL Y F L++AVLLSAQ+TDV VNKAT+
Sbjct: 9 PARRGSIMHKPEVQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRK 68
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L+ +A+TP+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ ++ ++P L
Sbjct: 69 LYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEQYAGEVPHDRAALEA 128
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L+ AFG PT+ VDTHIFR++NR GLAPGK VE L+++IP + +
Sbjct: 129 LPGVGRKTANVVLNTAFGEPTMAVDTHIFRVANRTGLAPGKDVRVVEDKLVKVIPAEFLH 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRYVCKARKP C +C+I +LC+ +
Sbjct: 189 DAHHWLILHGRYVCKARKPDCPACVIHDLCRYRDK 223
>gi|325925820|ref|ZP_08187190.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas perforans 91-118]
gi|325543755|gb|EGD15168.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Xanthomonas perforans 91-118]
Length = 221
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++E+F P P EL Y F L++AVLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + +P L LPG+GRK
Sbjct: 61 PRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVPHDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++IP + ++AH+WL+
Sbjct: 121 TANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVIPAEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C C+I +LC+ +
Sbjct: 181 LHGRYVCKARKPDCPGCVIHDLCRYRDK 208
>gi|255326716|ref|ZP_05367792.1| endonuclease III [Rothia mucilaginosa ATCC 25296]
gi|255295933|gb|EET75274.1| endonuclease III [Rothia mucilaginosa ATCC 25296]
Length = 303
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
P L T + +I + +P EL + N F L++A +LSAQ+TDV VN T LF
Sbjct: 46 PESHLATVRRARKINRILGETYPYAVAELDFDNPFELLIATVLSAQTTDVRVNSVTGALF 105
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + ++++ YI+++G YR K+ +I++LS L+ + ++P TLE L L
Sbjct: 106 ARYPDAAALASARTEEVEPYIQSLGFYRAKARSIVTLSQQLVERHNGQVPLTLEELVELA 165
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L AF +P + VDTH R++ R+G P VE+ + +I K
Sbjct: 166 GVGRKTANVVLGNAFDVPGLTVDTHFGRLARRMGFTTADAPETVEKDVAELIERKDWTLF 225
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +V HGR +C A+KP C C +++LC
Sbjct: 226 SHRMVYHGRRICHAKKPACGVCPVADLCPSY 256
>gi|222087212|ref|YP_002545747.1| endonuclease III [Agrobacterium radiobacter K84]
gi|221724660|gb|ACM27816.1| endonuclease III [Agrobacterium radiobacter K84]
Length = 259
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 130/226 (57%), Positives = 183/226 (80%), Gaps = 1/226 (0%)
Query: 3 SSKKSDSYQGNSPL-GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ KKS++ P C Y+ ELEEIF FS++ P PKGEL +VN FTL+VAV LSAQ+
Sbjct: 12 NMKKSNATASRKPAFKCPYSKAELEEIFRRFSIQRPEPKGELEHVNPFTLVVAVALSAQA 71
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV+VNKAT+ LF +ADTPQKML +GE ++++YI+TIG+YR K++N+++LS L+ +FD
Sbjct: 72 TDVSVNKATRALFAVADTPQKMLDLGEDRIRDYIKTIGLYRNKAKNVVALSEKLLRDFDG 131
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++PQT E L LPG+GRK ANV++SMAFG T+ VDTH+FRI+NR+ LAPGKTP++VEQ
Sbjct: 132 EVPQTREELMTLPGVGRKTANVVMSMAFGHATLAVDTHVFRIANRLLLAPGKTPDEVEQR 191
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+++IP ++ Y+AH+WL+LHGRYVCKARKP+C+ C+I++LC+ ++
Sbjct: 192 LMKVIPDQYLYHAHHWLILHGRYVCKARKPECERCVIADLCRSPEK 237
>gi|330957742|gb|EGH58002.1| endonuclease III [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 212
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+ SAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVIFSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGLSEYIKTIGLYNTKAKNVIETCRMLVELHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + AH+WL+
Sbjct: 121 TANVVLNTAFRQVAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLYAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCDYKNK 208
>gi|110802211|ref|YP_698638.1| endonuclease III [Clostridium perfringens SM101]
gi|110682712|gb|ABG86082.1| endonuclease III [Clostridium perfringens SM101]
Length = 209
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 128/205 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +E+ + ++P K EL Y F L+VA +LSAQ+TD VN+ TK LF+
Sbjct: 2 KKRTKEVLEILKEEYPDAKCELNYETPFQLLVATILSAQTTDKKVNEVTKGLFKDYPDVD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L I +++L++ I+ IG+YR K++N+I + L F ++P+T+EG+T L G GRK A
Sbjct: 62 SFLTISQEELEDRIKQIGLYRNKAKNLIMMVRQLKENFGGEVPKTMEGITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AFG+P+I VDTH+FR+SNRIGLA + E+ L + +P K AH+ L+ H
Sbjct: 122 NVVLSNAFGVPSIAVDTHVFRVSNRIGLAHSDNVLETEKQLQKELPKKEWSLAHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C ARKP+C C I+ C K
Sbjct: 182 GRRCCMARKPKCDICKINKYCDYFK 206
>gi|326441894|ref|ZP_08216628.1| putative endonuclease III [Streptomyces clavuligerus ATCC 27064]
Length = 253
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 113/205 (55%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 3 RRARRINRELAGVYPYAHPELDFRNPFELLVATVLSAQTTDLRVNQTTPALFAAYPTPED 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ IR G +R K+ ++I LS L + F ++P LE L LPG+GRK A
Sbjct: 63 LAAAVPEEVEEIIRPTGFFRAKTTSLIGLSIGLRDRFGGEVPSRLEDLVSLPGVGRKTAF 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P I VDTH R+ R + P KVE + +I P + ++ HG
Sbjct: 123 VVLGNAFGVPGITVDTHFGRLVRRWKWTEQEDPEKVEAEIAKIFPKSEWTMLSHRVIFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C I++LC +
Sbjct: 183 RRICHARKPACGACPIAHLCPSYGE 207
>gi|72160522|ref|YP_288179.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Thermobifida fusca YX]
gi|71914254|gb|AAZ54156.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Thermobifida fusca YX]
Length = 258
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 122/225 (54%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S+ + D+ G + L + +I + +P EL + L+VA +LSAQ T
Sbjct: 19 SAAERDTPTGETRLALMR---RSRQINRELARMYPDAHCELDFTTPLELLVATILSAQCT 75
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VNK T LF + + +++L+N IR+ G YR K+ NII+L L +E +
Sbjct: 76 DRRVNKVTPVLFARYRSAADYASANQEELENIIRSTGFYRTKARNIIALGQRLCDEHGGE 135
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P LE L +LPG+GRK ANV+L AFG+P + VDTH R+ R G+ P KVEQ +
Sbjct: 136 VPDRLEDLVKLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVRRFGMTRQTDPVKVEQEI 195
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ PP+ + L+ HGR VC AR+P C +C + +LC +
Sbjct: 196 AALFPPEEWTMLSHRLIWHGRRVCHARRPACGACELQHLCPSYGE 240
>gi|225174628|ref|ZP_03728626.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
gi|225169755|gb|EEG78551.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
Length = 222
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 137/207 (66%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ E+I + + P P EL + + L+VAV+LSAQSTD VNK T +LF +P
Sbjct: 4 RKEKAEKILAVLQEENPEPVSELNFDTPWQLLVAVILSAQSTDKQVNKVTANLFAKYASP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q M + ++L I+++G++R K+++++ + ++++ ++P+TL L LPG+GRK
Sbjct: 64 QDMAELTPEELAEDIKSLGLFRNKAKHLVGAARAILDQHGGEVPRTLAKLQSLPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L+ AFG+P + VDTH+FR++NR+GLA KTP + E+ L R IP +AH+WL+L
Sbjct: 124 ANVVLANAFGVPALAVDTHVFRVANRLGLAKAKTPEETEKQLSRAIPRSLWADAHHWLIL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGRY+C ARKP+C C ++ C ++
Sbjct: 184 HGRYICVARKPRCPQCPVTEWCSWYQK 210
>gi|21242332|ref|NP_641914.1| endonuclease III [Xanthomonas axonopodis pv. citri str. 306]
gi|21107765|gb|AAM36450.1| endonuclease III [Xanthomonas axonopodis pv. citri str. 306]
Length = 221
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++E+F P P EL Y F L++AVLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MRKPEIQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE+ L+ YI TIG++ K++N+I+ IL+ + +P L LPG+GRK
Sbjct: 61 PRDILDLGEEGLKRYISTIGLFNAKAKNVIATCRILLERYGGDVPHDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR GLAPGK VE L+++IP + ++AH+WL+
Sbjct: 121 TANVVLNTAFGEPAMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVIPSEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C C+I +LC+ +
Sbjct: 181 LHGRYVCKARKPDCPGCVIHDLCRYRDK 208
>gi|326777735|ref|ZP_08237000.1| endonuclease III [Streptomyces cf. griseus XylebKG-1]
gi|326658068|gb|EGE42914.1| endonuclease III [Streptomyces cf. griseus XylebKG-1]
Length = 304
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 122/225 (54%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
++K S + + L + I + +P EL + N F L+VA +LSAQ+T
Sbjct: 39 TAKASSAGKAPKAESHLAMVRRARRINRELAEVYPYAHPELDFRNPFELLVATVLSAQTT 98
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D+ VN+ T LF TP+ M A ++++ IR G +R K+++++ LS L ++F +
Sbjct: 99 DLRVNQTTPALFAAYPTPEDMAAAVPEEMEEIIRPTGFFRAKTKSLLGLSAALRDDFGGE 158
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P LE L +LPG+GRK ANV+L AFG+P I VDTH R+ R + P KVE +
Sbjct: 159 VPGRLEDLVKLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRWKWTDEEDPVKVEAVV 218
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I P + +V HGR +C ARKP C +C I+ LC +
Sbjct: 219 AGIFPKSEWTMLSHRVVFHGRRICHARKPACGACPIAPLCPSYGE 263
>gi|254700972|ref|ZP_05162800.1| endonuclease III [Brucella suis bv. 5 str. 513]
gi|261751492|ref|ZP_05995201.1| endonuclease III [Brucella suis bv. 5 str. 513]
gi|261741245|gb|EEY29171.1| endonuclease III [Brucella suis bv. 5 str. 513]
Length = 248
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 169/223 (75%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRCPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++NII LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNIILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVIPREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|114706401|ref|ZP_01439303.1| probable endonuclease iii protein [Fulvimarina pelagi HTCC2506]
gi|114538262|gb|EAU41384.1| probable endonuclease iii protein [Fulvimarina pelagi HTCC2506]
Length = 247
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 106/230 (46%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 1 MVSSKKSDS---YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLL 57
M +K + Y+ E+ EIF F+++ P P+ EL + N FTL+VAV+L
Sbjct: 1 MSQTKSAPKIAAKPRKRRPRIPYSKDEIAEIFQRFAVQRPEPRPELEHSNPFTLLVAVVL 60
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
SAQ+TD VNKAT+ LF +A+ + M A+GE+ ++++I++IG++R K++N+ +LS +L+
Sbjct: 61 SAQATDAGVNKATRGLFTVANNAKAMTALGEEAIRDHIKSIGLFRNKAKNVFALSQVLVA 120
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+ ++P L LPG+GRK ANV+L+ AFG T+ VDTHIFRI NR+ LAPGKTP++
Sbjct: 121 DHGGEVPHDRASLEALPGVGRKTANVVLNTAFGEETLAVDTHIFRIGNRLKLAPGKTPDE 180
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VE+ LL +IP ++ +AH+WL+LHGRYVCKARKP+C++C+I++LC+ ++
Sbjct: 181 VEERLLAVIPQPYRRHAHHWLILHGRYVCKARKPECEACVIADLCRAPEK 230
>gi|302559356|ref|ZP_07311698.1| endonuclease III [Streptomyces griseoflavus Tu4000]
gi|302476974|gb|EFL40067.1| endonuclease III [Streptomyces griseoflavus Tu4000]
Length = 251
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 114/205 (55%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 3 RRARRINRELAEVFPYAHPELDFENPFQLVVATVLSAQTTDLRVNQTTPALFAKYPTPED 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ +R G +R K+ +++ LS L+ +F ++P LE L +LPG+GRK A
Sbjct: 63 LAAANPEEVEEILRPTGFFRAKTRSVMGLSKALVEDFGGEVPGRLEDLVKLPGVGRKTAF 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG P I VDTH R+ R P+K+E ++ + P + + ++ HG
Sbjct: 123 VVLGNAFGRPGITVDTHFQRLVRRWRWTEETDPDKIEAAVGALFPKSDWTDLSHHVIWHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C I+ LC +
Sbjct: 183 RRICHARKPACGACPIAPLCPAYGE 207
>gi|323492352|ref|ZP_08097505.1| endonuclease III [Vibrio brasiliensis LMG 20546]
gi|323313399|gb|EGA66510.1| endonuclease III [Vibrio brasiliensis LMG 20546]
Length = 213
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRRLILERLREDNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +++YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GRK
Sbjct: 61 PQGLLDLGVDGVKDYIKTIGLFNSKAENVIKTCKILLEQHGGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR LA GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|284028446|ref|YP_003378377.1| endonuclease III [Kribbella flavida DSM 17836]
gi|283807739|gb|ADB29578.1| endonuclease III [Kribbella flavida DSM 17836]
Length = 262
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+K+ Y +P + ++ + + +P EL + + L+VA +LSAQ+TD
Sbjct: 26 PRKAPVYADETPTQLVR---RARKMHKVLTETYPDAHCELDFSSPLELLVATILSAQTTD 82
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V VNK T LF T Q +++ ++ G +R K+ +++ L L++E+D ++
Sbjct: 83 VTVNKVTPTLFAKYPTAQAYAEADRDEMEAILKPTGFFRAKTNSLLKLGQALVDEYDGQV 142
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P LE L +LPG GRK ANV+L AFGIP I VDTH R+ R G + P KVE +
Sbjct: 143 PGKLEELVKLPGTGRKTANVVLGNAFGIPGITVDTHFGRLVRRFGWTTEEDPVKVEHLIG 202
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P K + L+ HGR C A+KP C +C ++ C
Sbjct: 203 ALFPKKDWTMLSHRLIFHGRRRCHAKKPACGACPLAQWCPSF 244
>gi|119473026|ref|ZP_01614848.1| endonuclease III [Alteromonadales bacterium TW-7]
gi|119444604|gb|EAW25916.1| endonuclease III [Alteromonadales bacterium TW-7]
Length = 210
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P+P+ EL Y + F L+VAV LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNKEKRYQILTRLRDNNPNPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L IG KL++YI+TIG++ K+ N+ + IL+++ D+ +P+ E L LPG+GRK
Sbjct: 61 PQAILDIGHDKLRDYIKTIGLFNSKAANVYKMCQILVDKHDSIVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+SNR A GK +VE+ L +++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVSNRTKFAMGKNVVEVEKKLEKVVPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYVCTARKPKCGSCIIEDLCEFKDK 208
>gi|229588698|ref|YP_002870817.1| endonuclease III [Pseudomonas fluorescens SBW25]
gi|229360564|emb|CAY47421.1| endonuclease III [Pseudomonas fluorescens SBW25]
Length = 212
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y + F L++AV+LSAQSTDV VNKAT L+ +A+T
Sbjct: 1 MNAAKRLEIFRRLHEDNPEPKTELAYTSPFELLIAVILSAQSTDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L YI+TIG+Y K++N+I +L+ +++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLSEYIKTIGLYNSKAKNVIETCRLLVELHGSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR G+A GK +VE+ L++ +P + ++H+WL+
Sbjct: 121 TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKDK 208
>gi|260779360|ref|ZP_05888252.1| endonuclease III [Vibrio coralliilyticus ATCC BAA-450]
gi|260605524|gb|EEX31819.1| endonuclease III [Vibrio coralliilyticus ATCC BAA-450]
Length = 213
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRVQILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G ++ YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PQGLFDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|329939397|ref|ZP_08288733.1| endonuclease/N-glycosylase [Streptomyces griseoaurantiacus M045]
gi|329301626|gb|EGG45520.1| endonuclease/N-glycosylase [Streptomyces griseoaurantiacus M045]
Length = 288
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ S + I + +P EL + N F L+VA +LSAQ+TD+ V
Sbjct: 26 PRAAAAESRTALVR---RARRINRELAEVYPYAHPELDFENPFQLLVATVLSAQTTDLRV 82
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N+ T LF P+ + A ++++ +R G +R K+ +++ LS L+ FD ++P
Sbjct: 83 NQTTPALFARYPAPEDLAAADPEEVEEILRPCGFFRAKTRSVMGLSKALVERFDGEVPGR 142
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
LE L LPG+GRK A V+L AFG P I VDTH R+ R P K+E ++ +
Sbjct: 143 LEDLVTLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWRWTEETEPEKIEAAVGALF 202
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 203 PKSDWTMLSHHVIFHGRRMCHARKPACGACPIAPLCPAYGE 243
>gi|302390061|ref|YP_003825882.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Thermosediminibacter oceani DSM 16646]
gi|302200689|gb|ADL08259.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Thermosediminibacter oceani DSM 16646]
Length = 229
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 125/204 (61%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + +I L +P+ L Y N F L+VA +LSAQ TD VN+ T LF+ P+
Sbjct: 17 KERIRKILALLEESYPNATTALRYENPFQLLVATILSAQCTDRRVNQVTARLFKKYKGPE 76
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+L+ I+ G++R KS+NII S I++ ++ ++P E L +LPG+GRK A
Sbjct: 77 DFARAERHELEEDIKECGLFRSKSKNIIETSRIIVEKYGGRVPDEFEELIKLPGVGRKTA 136
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NVIL+ AFG P VDTH+FR++ R+G + GK P VE+ L +P ++ AH+WL+ H
Sbjct: 137 NVILANAFGKPAFAVDTHVFRVARRLGFSDGKDPLGVEKDLTAKVPREYWIKAHHWLINH 196
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
GR VC ARKP+C++C++ + C+
Sbjct: 197 GRRVCTARKPKCENCVLKDSCRYY 220
>gi|91974861|ref|YP_567520.1| endonuclease III [Rhodopseudomonas palustris BisB5]
gi|91681317|gb|ABE37619.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodopseudomonas palustris BisB5]
Length = 258
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 118/224 (52%), Positives = 164/224 (73%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+KS ++P E+ E F F+ P PKGEL ++N FTL+VAV+LSAQ+TD
Sbjct: 32 RQKSGKAATKPKRLRRWSPDEVREAFTRFARANPEPKGELEHLNPFTLLVAVVLSAQATD 91
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VNKAT+ LF +ADTPQKMLA+GE+++++YI+TIG++R K++N+I+LS LI +F ++
Sbjct: 92 SGVNKATRALFAVADTPQKMLALGEERVRDYIKTIGLFRTKAKNVIALSQKLITDFGGEV 151
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P T L LPG GRK ANV+L+MAFG PT+ VDTH+FR+ NR GLAPG TP VE +L
Sbjct: 152 PSTRAELETLPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELALE 211
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
R+IPP+ +AH+WL+LHGRY C ARKP+C+ C I++LC+ ++
Sbjct: 212 RMIPPEFMQHAHHWLILHGRYTCLARKPRCEVCPINDLCRWPEK 255
>gi|168207647|ref|ZP_02633652.1| endonuclease III [Clostridium perfringens E str. JGS1987]
gi|168215136|ref|ZP_02640761.1| endonuclease III [Clostridium perfringens CPE str. F4969]
gi|168218185|ref|ZP_02643810.1| endonuclease III [Clostridium perfringens NCTC 8239]
gi|169346824|ref|ZP_02630259.2| endonuclease III [Clostridium perfringens C str. JGS1495]
gi|182626601|ref|ZP_02954347.1| endonuclease III [Clostridium perfringens D str. JGS1721]
gi|169297044|gb|EDS79167.1| endonuclease III [Clostridium perfringens C str. JGS1495]
gi|170661013|gb|EDT13696.1| endonuclease III [Clostridium perfringens E str. JGS1987]
gi|170713462|gb|EDT25644.1| endonuclease III [Clostridium perfringens CPE str. F4969]
gi|177908081|gb|EDT70654.1| endonuclease III [Clostridium perfringens D str. JGS1721]
gi|182379795|gb|EDT77274.1| endonuclease III [Clostridium perfringens NCTC 8239]
Length = 209
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 128/205 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +E+ + ++P K EL Y F L+VA +LSAQ+TD VN+ TK LF+
Sbjct: 2 KKRTKEVLEILKEEYPDAKCELNYETPFQLLVATILSAQTTDKKVNEVTKGLFKDYPDVD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L I +++L++ I+ IG+YR K++N+I + H L F ++P+T+EG+T L G GRK A
Sbjct: 62 SFLTISQEELEDRIKQIGLYRNKAKNLIMMVHQLKENFGGEVPKTMEGITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AFG+P+I VDTH+FR+SNRIGLA + E+ L + +P K H+ L+ H
Sbjct: 122 NVVLSNAFGVPSIAVDTHVFRVSNRIGLAHSDNVLETEKQLQKELPKKEWSLTHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C ARKP+C C I+ C K
Sbjct: 182 GRRCCIARKPKCDICKINKYCDYFK 206
>gi|18310300|ref|NP_562234.1| endonuclease III [Clostridium perfringens str. 13]
gi|18144980|dbj|BAB81024.1| endonuclease III [Clostridium perfringens str. 13]
Length = 209
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 128/205 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +E+ + ++P K EL Y F L+VA +LSAQ+TD VN+ TK LF+
Sbjct: 2 KKRTKEVLEILKEEYPDAKCELNYETPFQLLVATILSAQTTDKKVNEVTKGLFKDYPDVD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L I +++L++ I+ IG+YR K++N+I + H L F ++P+T+EG+T L G GRK A
Sbjct: 62 SFLTISQEELEDRIKQIGLYRNKAKNLIMMVHQLKENFGGEVPKTMEGITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AFG+P+I VDTH+FR+SNRIGLA + E+ L + +P K H+ L+ H
Sbjct: 122 NVVLSNAFGVPSIAVDTHVFRVSNRIGLAHSDNVLETEKQLQKELPKKEWSLTHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C ARKP+C C I+ C K
Sbjct: 182 GRRCCIARKPKCDICKINKYCDYFK 206
>gi|254509399|ref|ZP_05121482.1| endonuclease III [Vibrio parahaemolyticus 16]
gi|219547673|gb|EED24715.1| endonuclease III [Vibrio parahaemolyticus 16]
Length = 213
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRRQILERLRADNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G ++ YI+TIG++ K+EN+I IL+ + + ++P+ E L LPG+GRK
Sbjct: 61 PQGLFDLGVDGVKEYIKTIGLFNSKAENVIKTCQILLEKHNGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|254472102|ref|ZP_05085502.1| endonuclease III [Pseudovibrio sp. JE062]
gi|211958385|gb|EEA93585.1| endonuclease III [Pseudovibrio sp. JE062]
Length = 239
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 126/233 (54%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Query: 1 MVSSKKSD-----SYQGNSPLGC-LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVA 54
MV + K+ S P+ Y+ E+ EIF F P P+GEL + N FTL+VA
Sbjct: 1 MVDATKTKKVASSSSTRKKPVSRSRYSKAEIYEIFATFEKDNPEPEGELNHSNEFTLLVA 60
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V+LSAQ+TD VNKATKHLF+IADTP+KM+A+GE K++ IRTIG+Y+ K++N LS +
Sbjct: 61 VVLSAQATDAGVNKATKHLFQIADTPEKMVALGEDKIREEIRTIGLYKNKAKNTFLLSQM 120
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
LI + ++PQT E L LPG+GRK ANV+L++AFG PTI VDTH+FRI+NR+GLAPGKT
Sbjct: 121 LIEQHGGQVPQTREELEALPGVGRKTANVVLNIAFGQPTIAVDTHLFRIANRLGLAPGKT 180
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P VE+ L ++IP +AH+WL+LHGRY+CKARKP C CII +LCK ++
Sbjct: 181 PLDVEKKLEKVIPQDFMQHAHHWLILHGRYICKARKPACDRCIIYDLCKSKEK 233
>gi|315127000|ref|YP_004069003.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas sp. SM9913]
gi|315015514|gb|ADT68852.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas sp. SM9913]
Length = 210
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL Y + F L+VAV LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNKEKRYQILTRLRDDNPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L IG L++YI+TIG++ K+ N+ + IL+++ + ++P+ E L LPG+GRK
Sbjct: 61 PQAILDIGHDTLRDYIKTIGLFNSKAANVYKMCQILVDQHNGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR LA GK VEQ L ++IP + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKLAMGKDVVAVEQKLEKVIPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYVCTARKPKCGSCIIEDLCEFKDK 208
>gi|32033526|ref|ZP_00133853.1| COG0177: Predicted EndoIII-related endonuclease [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208362|ref|YP_001053587.1| endonuclease III [Actinobacillus pleuropneumoniae L20]
gi|190150214|ref|YP_001968739.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303251255|ref|ZP_07337433.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|303252883|ref|ZP_07339042.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307245750|ref|ZP_07527836.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307247874|ref|ZP_07529910.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307250126|ref|ZP_07532088.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252513|ref|ZP_07534409.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307254722|ref|ZP_07536549.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307256939|ref|ZP_07538717.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307259163|ref|ZP_07540893.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|307261371|ref|ZP_07543046.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|307263553|ref|ZP_07545168.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|126097154|gb|ABN73982.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|189915345|gb|ACE61597.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302648313|gb|EFL78510.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302649797|gb|EFL79975.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306853452|gb|EFM85671.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306855676|gb|EFM87843.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306857857|gb|EFM89951.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306860105|gb|EFM92122.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306862248|gb|EFM94215.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306864673|gb|EFM96578.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306866830|gb|EFM98688.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306869102|gb|EFN00904.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306871196|gb|EFN02925.1| Endonuclease III [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 210
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y N F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLRNENPHPTTELNYSNPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG++ K+ENII LI + + ++P+ E L L G+GRK
Sbjct: 61 PQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|294851563|ref|ZP_06792236.1| endonuclease III [Brucella sp. NVSL 07-0026]
gi|294820152|gb|EFG37151.1| endonuclease III [Brucella sp. NVSL 07-0026]
Length = 248
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 128/223 (57%), Positives = 169/223 (75%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 10 VNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 69
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF +ADTPQKMLA+GE+K+ YIRTIG++R K++N+I LS LI ++
Sbjct: 70 TDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGG 129
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 130 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+I ++ +AH+WL+LHGRYVCKARKP+C+ C+I++LCK
Sbjct: 190 LVRVILREYMLHAHHWLILHGRYVCKARKPECEKCVIADLCKY 232
>gi|261253567|ref|ZP_05946140.1| endonuclease III [Vibrio orientalis CIP 102891]
gi|260936958|gb|EEX92947.1| endonuclease III [Vibrio orientalis CIP 102891]
Length = 213
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNKDKRRLILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G ++ YI+TIG++ K+EN+I I++++ + ++P+ E L LPG+GRK
Sbjct: 61 PQGLFDLGVDGVKEYIKTIGLFNSKAENVIKTCKIILDKHNGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR LA GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|110800037|ref|YP_695968.1| endonuclease III [Clostridium perfringens ATCC 13124]
gi|110674684|gb|ABG83671.1| endonuclease III [Clostridium perfringens ATCC 13124]
Length = 209
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 88/205 (42%), Positives = 129/205 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +E+ + ++P K EL Y F L+VA +LSAQ+TD VN+ TK LF+ +
Sbjct: 2 KKRTKEVLEILKEEYPDAKCELNYETPFQLLVATILSAQTTDKKVNEVTKGLFKDYPDVE 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L I +++L++ I+ IG+YR K++N+I + H L F ++P+T+EG+T L G GRK A
Sbjct: 62 SFLTISQEELEDRIKQIGLYRNKAKNLIMMVHQLKENFGGEVPKTMEGITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS +FG+P+I VDTH+FR+SNRIGLA + E+ L + +P K H+ L+ H
Sbjct: 122 NVVLSNSFGVPSIAVDTHVFRVSNRIGLAHSDNVLETEKQLQKELPKKEWSLTHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C ARKP+C C I+ C K
Sbjct: 182 GRRCCIARKPKCDICKINKYCDYFK 206
>gi|323496854|ref|ZP_08101891.1| endonuclease III [Vibrio sinaloensis DSM 21326]
gi|323318113|gb|EGA71087.1| endonuclease III [Vibrio sinaloensis DSM 21326]
Length = 213
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRRQILERLRADNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G ++ YI+TIG++ K+EN+I IL+++ ++P+ L LPG+GRK
Sbjct: 61 PQGLLDLGGDGVKQYIKTIGLFNSKAENVIKTCQILLDKHAGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|327194662|gb|EGE61511.1| endonuclease III protein [Rhizobium etli CNPAF512]
Length = 260
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 123/219 (56%), Positives = 177/219 (80%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + + Y+P E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TD VNK
Sbjct: 21 RRKPAAAVKTAYSPAEREEIFRRFSVQRPEPRGELEHTNPFTLVVAVALSAQATDAGVNK 80
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF++ADTPQKML +GE+K+++YI+TIG+YR K++N+I+LS +L++EF ++P+T E
Sbjct: 81 ATRALFKVADTPQKMLDLGEEKVRDYIKTIGLYRNKAKNVIALSQMLVDEFAGRVPETRE 140
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPGKTP++VE L++++P
Sbjct: 141 ELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIRLAPGKTPDEVEARLMKVVPK 200
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ Y+AH+WL+LHGRY CKAR+P+C+ C+I+++CK ++
Sbjct: 201 QYLYHAHHWLILHGRYTCKARRPECERCVIADICKSPEK 239
>gi|52843075|ref|YP_096874.1| endonuclease III [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52630186|gb|AAU28927.1| endonuclease III [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 211
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P P EL Y F L++AV+LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCEILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NRIG+A G TP VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNTPLAVEQELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKNK 208
>gi|297193049|ref|ZP_06910447.1| endonuclease III [Streptomyces pristinaespiralis ATCC 25486]
gi|197719820|gb|EDY63728.1| endonuclease III [Streptomyces pristinaespiralis ATCC 25486]
Length = 280
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S K+ + + S L + I + +P EL + N F L++A +LSAQ+T
Sbjct: 17 SGKRKKTPKPESRLAMVR---RARRINRELAEVYPYAHPELDFENAFQLLIATVLSAQTT 73
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D+ VN+ T LF TP+ + A ++++ IR G +R K+++I+ LS + + F +
Sbjct: 74 DLRVNQTTPALFAKYPTPEDLAAAQPEEVEELIRPTGFFRAKTKSIMGLSAAIRDNFGGE 133
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P LE L LPG+GRK A V+L AFG+P I VDTH R++ R P K+E +
Sbjct: 134 VPGRLEDLVTLPGVGRKTAFVVLGNAFGVPGITVDTHFMRLARRWKWTDQDDPVKIEAEI 193
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I P + ++ HGR +C +R+P C +C I++LC +
Sbjct: 194 ATIFPKSEWTMLSHRVIFHGRRICHSRRPACGACPITHLCPAYGE 238
>gi|190893518|ref|YP_001980060.1| endonuclease III protein [Rhizobium etli CIAT 652]
gi|190698797|gb|ACE92882.1| endonuclease III protein [Rhizobium etli CIAT 652]
Length = 268
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 176/219 (80%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + + Y+P E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TD VNK
Sbjct: 29 RRKPAAAVKTAYSPAEREEIFRRFSVQRPEPRGELEHTNPFTLVVAVALSAQATDAGVNK 88
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF+IADTPQKML +GE+K+++YI+TIG+YR K++N+I+LS +L++EF ++P+T E
Sbjct: 89 ATRALFKIADTPQKMLDLGEEKVRDYIKTIGLYRNKAKNVIALSQMLVDEFAGRVPETRE 148
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPGKTP++VE L++++P
Sbjct: 149 ELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIRLAPGKTPDEVEARLMKVVPK 208
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ Y+AH+WL+LHGRY CKAR+P+C+ C+I+++CK ++
Sbjct: 209 HYLYHAHHWLILHGRYTCKARRPECERCVIADICKSPEK 247
>gi|29831136|ref|NP_825770.1| endonuclease III [Streptomyces avermitilis MA-4680]
gi|29608250|dbj|BAC72305.1| putative endonuclease III [Streptomyces avermitilis MA-4680]
Length = 310
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 119/226 (52%), Gaps = 2/226 (0%)
Query: 4 SKKSDSYQGNSPLGCLYTP--KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ K P T + I + +P EL + N F LI+A +LSAQ+
Sbjct: 37 AAKPPKSAAKPPRNESRTALVRRARRINRELAEVYPYAHPELDFENSFQLILATVLSAQT 96
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD+ VN+ T LF TP+ + A ++++ +R G +R K++++I LS L+ EF
Sbjct: 97 TDLRVNQTTPALFAKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSKALVEEFGG 156
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L +LPG+GRK A V+L AFG P I VDTH R+ R K P+K+E +
Sbjct: 157 EVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWQWTDEKDPDKIEAA 216
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + P + ++ HGR +C ARKP C +C I+ LC +
Sbjct: 217 VGALFPKSEWTMLSHHVIFHGRRICHARKPACGACPIAPLCPAYGE 262
>gi|256822162|ref|YP_003146125.1| endonuclease III [Kangiella koreensis DSM 16069]
gi|256795701|gb|ACV26357.1| endonuclease III [Kangiella koreensis DSM 16069]
Length = 211
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF P+P EL Y + F L++AV+LSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MNKEKRQEIFERLRAHNPNPTTELEYNSTFELLIAVILSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+GE L+ YI+TIG++ K++N+IS LI + ++ IP + L L G+GRK
Sbjct: 61 PEAIYALGEDGLKEYIKTIGLFNSKAKNVISCCKDLIEKHNSVIPDNRKDLEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR +APGK +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTKIAPGKNVRQVEEKLLKFVPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKDK 208
>gi|119714606|ref|YP_921571.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Nocardioides sp. JS614]
gi|119535267|gb|ABL79884.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Nocardioides sp. JS614]
Length = 243
Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 110/224 (49%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+++ P + +I L + +P + EL + N F L+V +LSAQ+TD
Sbjct: 2 PRRTLGPVPAVPESRTGLVRRARKIDRLLAETYPDARCELDFDNPFELLVVTVLSAQTTD 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN LF + M L+ + +G +R K+E+++ LS L+ ++
Sbjct: 62 KRVNAVRPTLFAAYPDARTMAGADRATLEGIVGPLGFFRAKTESLLKLSAALVERHGGEV 121
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P L+ L +LPG+GRK ANV+L AFGIP I VDTH R+S R P KVE ++
Sbjct: 122 PPRLDDLVQLPGVGRKTANVVLGNAFGIPGITVDTHFGRLSRRFAWTEETDPVKVEHAVG 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + + L+ HGR +C AR P C +C ++ C +
Sbjct: 182 ALFEKRDWTMLSHHLIWHGRRICHARNPACGACPVARWCPAYGE 225
>gi|28199403|ref|NP_779717.1| endonuclease III [Xylella fastidiosa Temecula1]
gi|28057509|gb|AAO29366.1| endonuclease III [Xylella fastidiosa Temecula1]
gi|307578400|gb|ADN62369.1| endonuclease III [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 212
Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E+ E F P P EL Y F L++AV+LSAQ+TD+ VNKAT+ L+ +A+T
Sbjct: 1 MTRAEIREAFVRLQEINPHPTTELKYTTAFELLIAVILSAQATDIGVNKATRRLYSLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE L+ +I TIG++ K++N+I+ IL+ ++ +P+ L LPG+GRK
Sbjct: 61 PQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQYGGAVPRDRALLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLA G VE +LL+ IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAIGSNVRAVEDALLKRIPQEFLKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C C+I++LC+ +
Sbjct: 181 LHGRYVCKARKPNCSQCVIADLCRYKDK 208
>gi|251792846|ref|YP_003007572.1| endonuclease III [Aggregatibacter aphrophilus NJ8700]
gi|247534239|gb|ACS97485.1| endonuclease III [Aggregatibacter aphrophilus NJ8700]
Length = 213
Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L++AV+LSAQ+TD VNKAT LF IA+T
Sbjct: 1 MNKEKRIEILKRLRAANPHPTTELNFSSPFELLIAVILSAQATDKGVNKATDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LA+G L+ YI+TIG++ K+ENII LI + + ++P+ L L G+GRK
Sbjct: 61 PQAILALGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPEDRAALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APGK KVE+ L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVCNRTGFAPGKDVVKVEEKLIKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGACIIEDLCEYKEK 208
>gi|149926239|ref|ZP_01914501.1| Endonuclease III/Nth [Limnobacter sp. MED105]
gi|149825057|gb|EDM84269.1| Endonuclease III/Nth [Limnobacter sp. MED105]
Length = 210
Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF F P PK EL Y F L+ AVLLSAQ+TD VN AT+ LF +A+T
Sbjct: 1 MNKEKRTEIFKRFQQANPEPKTELEYSTPFELLAAVLLSAQATDKGVNIATRKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+G ++ YI+TIG++R K+++++ + IL ++ + ++P E L LPG+GRK
Sbjct: 61 PASIAALGVAGVEGYIKTIGLFRSKAKHLVQTAEILRDQHNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFRISNR G+APGK +VE+ LL+++P + NAH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRISNRTGIAPGKDVLEVEKRLLKLVPQEFMLNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C I +LC+ K+
Sbjct: 181 LHGRYVCKARKPECTRCSIVDLCEFKKK 208
>gi|296444581|ref|ZP_06886545.1| endonuclease III [Methylosinus trichosporium OB3b]
gi|296257849|gb|EFH04912.1| endonuclease III [Methylosinus trichosporium OB3b]
Length = 229
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 115/227 (50%), Positives = 162/227 (71%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M + K + + ++EIF P PKGEL +VN FTL+VAV+LSAQ
Sbjct: 1 MPNEKSAPATTPRRSSPRAREAARIDEIFARLEAADPHPKGELEHVNIFTLLVAVVLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNKAT+ LF++ADTPQKM A+GE++L++YI+TIG+Y K++N+I+LS LI
Sbjct: 61 ATDVGVNKATRELFKVADTPQKMAALGEERLKDYIKTIGLYPTKAKNVIALSRQLIERHG 120
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P E L LPG+GRK ANV+L++AF +P I VDTHIFR+SNR+ LA GKT +VE
Sbjct: 121 AEVPCDREALEALPGVGRKTANVVLNIAFHVPVIAVDTHIFRLSNRLPLAAGKTVEQVEA 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L +I+P + + +AH+WL+LHGRYVCKAR+P+C+ CII++LC+ +
Sbjct: 181 GLEKIVPERFKLHAHHWLILHGRYVCKARRPECERCIIADLCRFAGK 227
>gi|312959249|ref|ZP_07773767.1| endonuclease III [Pseudomonas fluorescens WH6]
gi|311286509|gb|EFQ65072.1| endonuclease III [Pseudomonas fluorescens WH6]
Length = 212
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF F P PK EL Y + F L++AV+LSAQSTDV VNKAT L+ +A+T
Sbjct: 1 MNAAKRLEIFRRFHEDNPEPKTELAYTSPFELLIAVILSAQSTDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L YI+TIG+Y K++N+I +LI + +++PQT E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLSEYIKTIGLYNSKAKNVIETCRLLIEQHGSEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR G+A GK +VE+ L++ +P + ++H+WL+
Sbjct: 121 TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 181 LHGRYVCQARKPRCGSCRIEDLCEYKDK 208
>gi|296108528|ref|YP_003620229.1| endonuclease III [Legionella pneumophila 2300/99 Alcoy]
gi|295650430|gb|ADG26277.1| endonuclease III [Legionella pneumophila 2300/99 Alcoy]
Length = 211
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P P EL Y F L++AV+LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCAILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NRIG+A G TP VE+ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNTPLAVERELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKDK 208
>gi|91228904|ref|ZP_01262804.1| endonuclease III [Vibrio alginolyticus 12G01]
gi|91187535|gb|EAS73867.1| endonuclease III [Vibrio alginolyticus 12G01]
Length = 213
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNKIKRI-EILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+GR
Sbjct: 60 TPQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VEQ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEYKEK 208
>gi|119897726|ref|YP_932939.1| DNA-(apurinic or apyrimidinic site) lyase [Azoarcus sp. BH72]
gi|119670139|emb|CAL94052.1| DNA-(apurinic or apyrimidinic site) lyase [Azoarcus sp. BH72]
Length = 213
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 142/205 (69%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + ++E F + P PK EL Y + L+VAV+LSAQ+TD +VN AT+ LF A
Sbjct: 2 ALMKREAIQEFFSRLAAANPEPKTELEYQTPYQLLVAVVLSAQATDKSVNLATRKLFAAA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ MLA+GE+ + +YI+TIG++R K++N ++LS +L+ ++P+ E L LPG+G
Sbjct: 62 PTPEAMLALGEEGVADYIKTIGLFRNKAKNTVALSRLLLERHGGEVPRDREALEALPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L+ F P + VDTHIFR++NR GLAPGK VEQSLL+ +P +AH+W
Sbjct: 122 RKTANVVLNTIFREPAMAVDTHIFRLANRTGLAPGKDVMAVEQSLLKRVPKAFLLDAHHW 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+LHGRYVC ARKP C +CI+ +LC
Sbjct: 182 LILHGRYVCTARKPNCAACIVRDLC 206
>gi|54295705|ref|YP_128120.1| endonuclease III [Legionella pneumophila str. Lens]
gi|53755537|emb|CAH17036.1| Endonuclease III [Legionella pneumophila str. Lens]
Length = 211
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 149/208 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P P EL Y F L++AV+LSAQ+TDV+VNKAT LF A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCEILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NRIG+A G TP VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVVNRIGIAKGNTPLAVEQELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKDK 208
>gi|307611753|emb|CBX01461.1| endonuclease III [Legionella pneumophila 130b]
Length = 211
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P P EL Y F L++AV+LSAQ+TDV+VNKAT LF A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCEILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NRIG+A G TP VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNTPLAVEQELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKDK 208
>gi|54298872|ref|YP_125241.1| endonuclease III [Legionella pneumophila str. Paris]
gi|53752657|emb|CAH14092.1| Endonuclease III [Legionella pneumophila str. Paris]
Length = 211
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P P EL Y F L++AV+LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCAILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NRIG+A G P VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNAPLAVEQELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKDK 208
>gi|260913861|ref|ZP_05920335.1| endonuclease III [Pasteurella dagmatis ATCC 43325]
gi|260631948|gb|EEX50125.1| endonuclease III [Pasteurella dagmatis ATCC 43325]
Length = 210
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MNKQKRI-EILTRLRDENPHPTTELNYSSPFELLIAVILSAQATDKGVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +LA+G L+ YI+TIG++ K+ENII LI + + +IPQ L L G+GR
Sbjct: 60 TPEAILALGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPQDRAALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGQPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|239831014|ref|ZP_04679343.1| endonuclease III [Ochrobactrum intermedium LMG 3301]
gi|239823281|gb|EEQ94849.1| endonuclease III [Ochrobactrum intermedium LMG 3301]
Length = 248
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 128/218 (58%), Positives = 168/218 (77%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
S + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+TD V
Sbjct: 13 SPARSQRRVRGTLYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQATDAGV 72
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKAT+ LF +ADTPQKMLA+GE+K+ +YIRTIG++R K++N+I LS LI + K+P
Sbjct: 73 NKATRGLFAVADTPQKMLALGEEKVGDYIRTIGLWRNKAKNVILLSEALIRDHGGKVPGD 132
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE L+R+I
Sbjct: 133 RDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAILVRVI 192
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P ++ +AH+WL+LHGRYVCKARKP+C+ C+I+++CK
Sbjct: 193 PAEYMLHAHHWLILHGRYVCKARKPECEKCVIADICKY 230
>gi|284040861|ref|YP_003390791.1| endonuclease III [Spirosoma linguale DSM 74]
gi|283820154|gb|ADB41992.1| endonuclease III [Spirosoma linguale DSM 74]
Length = 215
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + F+ +P PK EL++ N + L+VAV+LSAQ TD +N+ + LF
Sbjct: 1 MQKKERFRRFIEYFTEHYPDPKTELHFSNPYELLVAVILSAQCTDKRINQISPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A +++ +YIR++ K+++++ +++ L+N F +IP T++ L LPG+GR
Sbjct: 61 EAESLAAASVEEVFSYIRSVSYPNNKAKHLVGMANALMNRFGGEIPATVDELQTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K A+VILS+ + PT+ VDTH+FR+S+R+GLAP TP VE++L+ IP +H AH+
Sbjct: 121 KTAHVILSIVYNEPTMAVDTHVFRVSHRLGLAPLTANTPLAVEKALMAHIPKQHVPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRYVC AR P+C+ C + CK ++
Sbjct: 181 WLILHGRYVCLARSPKCEECALKEFCKYFEK 211
>gi|152995567|ref|YP_001340402.1| endonuclease III [Marinomonas sp. MWYL1]
gi|150836491|gb|ABR70467.1| endonuclease III [Marinomonas sp. MWYL1]
Length = 211
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P+P EL Y + F L++AVL SAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNKEKRYEIFSRLRAENPNPVTELEYSSPFELLIAVLFSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G L+ YI+TIG++ K+EN I ILI + ++ +P+T E L LPG+GRK
Sbjct: 61 PETMLALGVDGLKEYIKTIGLFNAKAENAIKTCQILIEKHNSVVPETREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR NR +APGK +VE LL+ +P + +AH+W++
Sbjct: 121 TANVVLNTAFRQVAMAVDTHIFRFGNRTKVAPGKNVLEVEMKLLKFVPKEFLLDAHHWMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARKP+C +CII +LC+ +
Sbjct: 181 LHGRYICVARKPKCDACIIEDLCEFKDK 208
>gi|262393716|ref|YP_003285570.1| endonuclease III [Vibrio sp. Ex25]
gi|262337310|gb|ACY51105.1| endonuclease III [Vibrio sp. Ex25]
Length = 213
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNKIKRI-EILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+GR
Sbjct: 60 TPKSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VEQ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCLARKPRCGSCIIEDLCEYKEK 208
>gi|330830245|ref|YP_004393197.1| endonuclease III [Aeromonas veronii B565]
gi|328805381|gb|AEB50580.1| Endonuclease III [Aeromonas veronii B565]
Length = 213
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNNQKRREILERLRANNPHPTTELNFNSPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G L+ YI+TIG++ K+EN+I IL+ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGVDGLKEYIKTIGLFNTKAENVIKTCAILLERHGGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAVGKNVDQVEEKLLKVVPAEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEYKEK 208
>gi|261867807|ref|YP_003255729.1| endonuclease III [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413139|gb|ACX82510.1| endonuclease III [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 211
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKEKRIEILKRLRAANPYPTTELNFSSPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LA+G L+ YI+TIG++ K+ENII LI + + +P+ L L G+GRK
Sbjct: 61 PQTILALGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGDVPEDRAALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APGK KVE+ L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVCNRTGFAPGKDVVKVEEKLIKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGACIIEDLCEYKDK 208
>gi|254974165|ref|ZP_05270637.1| endonuclease III [Clostridium difficile QCD-66c26]
gi|255091566|ref|ZP_05321044.1| endonuclease III [Clostridium difficile CIP 107932]
gi|255313292|ref|ZP_05354875.1| endonuclease III [Clostridium difficile QCD-76w55]
gi|255515983|ref|ZP_05383659.1| endonuclease III [Clostridium difficile QCD-97b34]
gi|255649074|ref|ZP_05395976.1| endonuclease III [Clostridium difficile QCD-37x79]
gi|306519188|ref|ZP_07405535.1| endonuclease III [Clostridium difficile QCD-32g58]
Length = 350
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 123/207 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K++ +I +P K EL Y F L++A +LSAQ TDV VNK T LF+ +T
Sbjct: 139 NKKDVNKILDELEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTA 198
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++ I++ G+Y+ KS+ I S L +D ++P +LE L +LPG+GRK
Sbjct: 199 RDFANLSIEEISKEIKSCGLYKSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKT 258
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+LS AF P I VDTH+FR+SNRIG+ P K E +L+ IP + ++H+ L+
Sbjct: 259 AGVVLSNAFNHPAIAVDTHVFRVSNRIGIVDEPNPQKTEFALMEAIPKERWSHSHHVLIF 318
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +CKAR P+C SC I C K+
Sbjct: 319 HGRRMCKARNPECASCPIKEDCNYYKE 345
>gi|307328276|ref|ZP_07607454.1| endonuclease III [Streptomyces violaceusniger Tu 4113]
gi|306886110|gb|EFN17118.1| endonuclease III [Streptomyces violaceusniger Tu 4113]
Length = 289
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 116/223 (52%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
K +G P L + I + +P EL + + F L+VA +LSAQ+TD+
Sbjct: 25 KSVKGSKGARPESRLALVRRARRINRELAEVYPYAHPELDFESPFQLLVATVLSAQTTDL 84
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VN+ T LF P+ M A + L+ IR G +R K+++++ LS L + F ++P
Sbjct: 85 RVNQTTPALFAAYPAPEDMAAADPEALEQLIRPTGFFRAKAKSLLGLSAALRDRFGGEVP 144
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
LE L LPG+GRK ANV+L AFG+P + VDTH R+ R + P KVE +
Sbjct: 145 GRLEDLVTLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVRRWKWTAQEDPEKVEAEIAA 204
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ P + ++ HGR VC ARKP C +C I+ LC +
Sbjct: 205 LFPKSEWTMLSHRIIFHGRRVCHARKPACGACPIAPLCPAYGE 247
>gi|325578313|ref|ZP_08148448.1| endonuclease III [Haemophilus parainfluenzae ATCC 33392]
gi|325160049|gb|EGC72178.1| endonuclease III [Haemophilus parainfluenzae ATCC 33392]
Length = 211
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y + F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLREQNPHPTTELEYNSPFELLIAVILSAQATDKGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG+Y K+ENII L+ + + ++P++ E L L G+GRK
Sbjct: 61 PQAILDLGLEGLKEYIKTIGLYNSKAENIIKTCRDLVEKHNGEVPESREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVCNRTNFAPGKDVVKVEEKLLKVVPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ ++
Sbjct: 181 LHGRYTCTARKPRCGACIIEDLCEYKEK 208
>gi|254385576|ref|ZP_05000901.1| endonuclease III [Streptomyces sp. Mg1]
gi|194344446|gb|EDX25412.1| endonuclease III [Streptomyces sp. Mg1]
Length = 284
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 11/236 (4%)
Query: 3 SSKKSDSYQGNSPLGCLYTPK-ELE----------EIFYLFSLKWPSPKGELYYVNHFTL 51
+ K+ ++P G K + E I + +P EL + N F L
Sbjct: 5 APAKASPKIPSTPQGKTSAKKPKAESRVALVRRARRINRELAEVYPYAHPELDFRNPFEL 64
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+VA +LSAQ+TD+ VN+ T LF TP+ M + L+ IR G +R KS++++ L
Sbjct: 65 LVATVLSAQTTDLRVNQTTPALFAAYPTPEDMAQAAPEALEEIIRPTGFFRAKSKSLLGL 124
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
S L + F ++P +E L LPG+GRK ANV+L AFG+P I VDTH R+ R
Sbjct: 125 SQALRDNFGGEVPGRIEDLVSLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRWKWTE 184
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ P KVE + + P + +V HGR +C ARKP C +C I+ LC +
Sbjct: 185 QEDPEKVEAEICALFPKSEWTMLSHRVVFHGRRICHARKPACGACPIAPLCPAYGE 240
>gi|74318039|ref|YP_315779.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Thiobacillus denitrificans ATCC 25259]
gi|74057534|gb|AAZ97974.1| Endonuclease III/Nth [Thiobacillus denitrificans ATCC 25259]
Length = 229
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P EL Y F L+VAV+LSAQSTD VN+AT+ LF IA+T
Sbjct: 1 MNADKRREIFRRLREANPHPTTELEYATPFELLVAVVLSAQSTDKGVNRATRVLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+GE L +YI+TIG+Y+ K+ ++I+ S +L++ ++P L LPG+GRK
Sbjct: 61 PAAIHALGEAGLADYIKTIGLYKSKARHLIAASRMLLDLHGGEVPADRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG T+ VDTHIFR++NR GLAPGKT +VE+ L++ P + +AH+WL+
Sbjct: 121 TANVILNTAFGQATMAVDTHIFRVANRTGLAPGKTVLEVEKKLVKTTPAEFLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+AR+P+C CII +LC+ +
Sbjct: 181 LHGRYVCQARRPKCAECIIVDLCEFKAK 208
>gi|33152238|ref|NP_873591.1| endonuclease III, DNA (apurinic or apyrimidinic site) lyase
[Haemophilus ducreyi 35000HP]
gi|33148460|gb|AAP95980.1| endonuclease III, DNA (apurinic or apyrimidinic site) lyase
[Haemophilus ducreyi 35000HP]
Length = 211
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI K P P EL+Y N F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLRQKNPHPTTELHYHNPFELLIAVILSAQATDKGVNKATDKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ++ +G L++YI+TIG++ K+ENII L+++ + ++PQ + L L G+GRK
Sbjct: 61 PQQIFDLGVDGLKSYIKTIGLFNSKAENIIKTCRDLLDKHNGEVPQDRDALQALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PTI VDTHIFR+SNR G A GK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFNQPTIAVDTHIFRVSNRTGFATGKDVLKVEEKLLKVVPAEFKIDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKQK 208
>gi|237808204|ref|YP_002892644.1| endonuclease III [Tolumonas auensis DSM 9187]
gi|237500465|gb|ACQ93058.1| endonuclease III [Tolumonas auensis DSM 9187]
Length = 213
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P EL Y + F L+++V+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRRQILERLREANPNPTTELEYTSPFELLISVILSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L++YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PEAIQALGVDGLKSYIKTIGLYNAKAENIIKTCAILLEKHNGEVPENRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PTI VDTHIFR++NR G APGK N+VE+ LLR +P + + + H+WL+
Sbjct: 121 TANVVLNTAFDWPTIAVDTHIFRVANRTGFAPGKDVNEVEEKLLRHVPAEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKQK 208
>gi|150391360|ref|YP_001321409.1| endonuclease III [Alkaliphilus metalliredigens QYMF]
gi|149951222|gb|ABR49750.1| endonuclease III [Alkaliphilus metalliredigens QYMF]
Length = 216
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 130/211 (61%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+E + +P+ + EL + N F L+++ +L+AQ TD VN+ TK LFE
Sbjct: 3 KIRLNKEERTAVLAELKNMYPNAESELNFRNPFELLISTILAAQCTDKRVNQVTKPLFEK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP+++L + E +L +I++ G Y KS+NI++ H+L+ + ++P+ E L LPG+
Sbjct: 63 YPTPERILTLTEVELGQWIKSCGFYNMKSKNILATCHLLMEKHGGEVPEEREALMALPGV 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV++S FG I VDTH+FR+SNR+GLA + EQ L++ IP +AH+
Sbjct: 123 GRKTANVVISNVFGQDAIAVDTHVFRVSNRLGLAHSDNVDDTEQDLMKSIPKSMWSDAHH 182
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
W++LHGR +CKAR+P C+ C ++ C K+
Sbjct: 183 WIILHGRRICKARRPLCEECPLTTYCLHYKK 213
>gi|269962094|ref|ZP_06176448.1| Predicted EndoIII-related endonuclease [Vibrio harveyi 1DA3]
gi|269833178|gb|EEZ87283.1| Predicted EndoIII-related endonuclease [Vibrio harveyi 1DA3]
Length = 213
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKVKRI-EILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+GR
Sbjct: 60 TPQGILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEEKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEYKEK 208
>gi|154253999|ref|YP_001414823.1| endonuclease III [Parvibaculum lavamentivorans DS-1]
gi|154157949|gb|ABS65166.1| endonuclease III [Parvibaculum lavamentivorans DS-1]
Length = 214
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 113/208 (54%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++EE F + P PK EL Y N +TL+VAV+LSAQ+TD VNKATK LF+ DT
Sbjct: 3 MKKPDIEEFFRRLAAALPEPKTELEYRNVYTLLVAVVLSAQATDTGVNKATKELFKTVDT 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKML +GE L +I+TIG+YR K++N+I+LS +LI E ++P + L LPG+GRK
Sbjct: 63 PQKMLKLGEAGLTKHIKTIGLYRNKAKNVIALSRMLIEEHGGEVPHDRDALQALPGVGRK 122
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTHIFR+SNR GLAPGK VEQ L +++P ++ +AH+WL+
Sbjct: 123 TANVVLNVAFGEPTIAVDTHIFRVSNRTGLAPGKDVVAVEQKLEKVVPAAYRLHAHHWLI 182
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C +C +S+LC+ +
Sbjct: 183 LHGRYVCKARKPDCPACPVSDLCQFKAK 210
>gi|322514096|ref|ZP_08067167.1| endonuclease III [Actinobacillus ureae ATCC 25976]
gi|322120113|gb|EFX92084.1| endonuclease III [Actinobacillus ureae ATCC 25976]
Length = 210
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 137/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y N F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLRNENPHPTTELNYSNPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG++ K+ENII LI + ++P+ E L L G+GRK
Sbjct: 61 PQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHHGEVPENREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P I VDTHIFR+SNR G A GK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPAIAVDTHIFRVSNRTGFALGKDVIKVEEKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKDK 208
>gi|300024862|ref|YP_003757473.1| endonuclease III [Hyphomicrobium denitrificans ATCC 51888]
gi|299526683|gb|ADJ25152.1| endonuclease III [Hyphomicrobium denitrificans ATCC 51888]
Length = 253
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 161/220 (73%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
+ G L T E+ E+F F P PKGEL YVN +TL++AV+LSAQ+TD
Sbjct: 27 RPLKKPAGKGSRRILLTEAEIYEVFRRFHAASPEPKGELLYVNPYTLLIAVVLSAQATDA 86
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VNKAT LF +AD+P+KMLA+GE K+++ ++TIG+YR K++N+I+LS L++EF ++P
Sbjct: 87 GVNKATPALFRLADSPEKMLALGEDKVRDLVKTIGLYRTKAKNVIALSQRLVDEFGGEVP 146
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
+ L LPG+GRK ANV++++AFG PT+ VDTH+FRI+NR+ L+ G TP VE LLR
Sbjct: 147 GDRDVLETLPGVGRKTANVVMNIAFGHPTMAVDTHVFRIANRLALSQGTTPLAVEADLLR 206
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++PP++ +AH+WL+LHGRYVCKARKP+C C+++++C
Sbjct: 207 VVPPEYALHAHHWLILHGRYVCKARKPECWRCLVNDICLY 246
>gi|110834478|ref|YP_693337.1| DNA-(apurinic or apyrimidinic site) lyase [Alcanivorax borkumensis
SK2]
gi|110647589|emb|CAL17065.1| DNA-(apurinic or apyrimidinic site) lyase [Alcanivorax borkumensis
SK2]
Length = 212
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 148/205 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P P EL Y + F L+VAV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNREKRTEIFSRLRAQNPHPTTELEYQSDFELLVAVVLSAQATDVGVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+ENII L ILI + ++++P+T E L LPG+GRK
Sbjct: 61 PEAIFALGVDGLKEYIKTIGLFNSKAENIIQLCKILIEQHESQVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+SNR +APGK +VE+ L+R++P + +AH+WL+
Sbjct: 121 TANVVLNTAFGYPTMAVDTHIFRVSNRTRIAPGKNVLEVEKRLVRLVPEEFLRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP+C C+I++LC+
Sbjct: 181 LHGRYVCTARKPKCGECLIADLCEF 205
>gi|169335572|ref|ZP_02862765.1| hypothetical protein ANASTE_01987 [Anaerofustis stercorihominis DSM
17244]
gi|169258310|gb|EDS72276.1| hypothetical protein ANASTE_01987 [Anaerofustis stercorihominis DSM
17244]
Length = 221
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 139/207 (67%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T KE EI + S + K L++ + F L++A +LSAQ TD VN T+ LF+ A+
Sbjct: 1 MKTKKETLEIIDILSKYYGEYKCGLHFKSPFELLIATILSAQCTDERVNIVTEKLFKEAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP ++L +GEK+L YI++ G+ KS+NII L NE++ ++P+T+E L +L G+GR
Sbjct: 61 TPSEILEMGEKELLKYIKSCGLSNTKSKNIIKTCFTLCNEYNEEVPKTMEELIKLNGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+LS AFG+P I VDTH+ R+SNRIGLA K EQSL++ IP ++ NAH+W+
Sbjct: 121 KTANVVLSNAFGVPAIAVDTHVQRVSNRIGLANSDDVLKTEQSLMKKIPKEYWSNAHHWI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ HGR +C AR P+C+ C +++LC
Sbjct: 181 IWHGRKICTARNPKCEECPLNSLCNFY 207
>gi|255099671|ref|ZP_05328648.1| endonuclease III [Clostridium difficile QCD-63q42]
Length = 405
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 2/225 (0%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+SK++ S K++ +I +P K EL Y F L++A +LSAQ T
Sbjct: 178 TSKETKSKSKIKNESA--NEKDVNKILDELEKLYPDAKCELNYGTAFELLIATILSAQCT 235
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VNK T LF+ +T + + +++ I++ G+Y+ KS+ I S L +D +
Sbjct: 236 DVRVNKVTSELFKKYNTARDFANLSIEEISKEIKSCGLYKSKSQKIKDTSEQLCELYDGE 295
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P +LE L +LPG+GRK A V+LS AF P I VDTH+FR+SNRIG+ P K E +L
Sbjct: 296 VPDSLEKLIKLPGVGRKTAGVVLSNAFNHPAIAVDTHVFRVSNRIGIVDEPNPQKTEFAL 355
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ IP + ++H+ L+ HGR +CKAR P+C SC I C K+
Sbjct: 356 MEAIPKERWSHSHHVLIFHGRRMCKARNPECASCPIKEDCNYYKE 400
>gi|254491623|ref|ZP_05104802.1| endonuclease III [Methylophaga thiooxidans DMS010]
gi|224463101|gb|EEF79371.1| endonuclease III [Methylophaga thiooxydans DMS010]
Length = 217
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 93/207 (44%), Positives = 138/207 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +E F + P+P EL Y + F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNQRQRQEFFATLRAQNPAPTTELNYTSPFELLIAVILSAQATDVGVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +G L+ YI+TIG++ K+EN+I LI + + ++P L LPG+GRK
Sbjct: 61 PEAIYQLGVDGLKQYIKTIGLFNSKAENVIKTCRQLIEQHNGEVPADRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ F P + VDTHIFR+SNR GLA GKT VE L++++P + +AH+WL+
Sbjct: 121 TANVVLNTVFKQPVMAVDTHIFRLSNRTGLAKGKTVRAVEDKLMKVVPAEFMLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGRYVC ARKP+C+ C +++LC +
Sbjct: 181 LHGRYVCTARKPKCEECCVTHLCDYFR 207
>gi|153007521|ref|YP_001368736.1| endonuclease III [Ochrobactrum anthropi ATCC 49188]
gi|151559409|gb|ABS12907.1| endonuclease III [Ochrobactrum anthropi ATCC 49188]
Length = 249
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 171/223 (76%), Gaps = 3/223 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
VS+ + G LYT E+ EIF FS++ P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 12 VSAATRPQRRVR---GALYTADEIHEIFRRFSIQRPEPKGELEHVNAFTLLVAVVLSAQA 68
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKAT+ LF IADTPQKMLA+GE+K+ ++IRTIG++R K++N+I LS LI + D
Sbjct: 69 TDAGVNKATRGLFAIADTPQKMLALGEEKVGDHIRTIGLWRNKAKNVILLSEALIRDHDG 128
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + L +LPG+GRK ANV+L+MAFG PT+ VDTHI RI NRIGLAPGKTP VE
Sbjct: 129 EVPGDRDELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAI 188
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R+IP ++ +AH+WL+LHGRYVCKARKP+C+ C+I+++CK
Sbjct: 189 LVRVIPAEYMLHAHHWLILHGRYVCKARKPECEKCVIADICKY 231
>gi|288959678|ref|YP_003450019.1| endonuclease III [Azospirillum sp. B510]
gi|288911986|dbj|BAI73475.1| endonuclease III [Azospirillum sp. B510]
Length = 215
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 110/207 (53%), Positives = 153/207 (73%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + P ++E F S P P+ EL YVN +TL+VAV+LSAQ+TDV VNKAT LF+
Sbjct: 1 MVTVMKPAAVQEFFRRLSAANPEPRSELEYVNPYTLLVAVVLSAQATDVGVNKATGPLFQ 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
I TP++M+A+GE+ L+ YI+TIG++ K++N+I LS +LI ++P+ E L +LPG
Sbjct: 61 IVTTPRQMVALGEEGLRRYIKTIGLFNTKAKNVIRLSELLIERHGGEVPRDREALEQLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L++AFG TI VDTHIFR+ NR GLAPGKTP+ VE LL+ +P ++ +AH
Sbjct: 121 VGRKTANVVLNVAFGEETIAVDTHIFRVGNRTGLAPGKTPDAVEAKLLKTVPKLYRRHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+WL+LHGRYVCKARKP C C +++LC
Sbjct: 181 HWLILHGRYVCKARKPDCPVCPVADLC 207
>gi|182437125|ref|YP_001824844.1| putative endonuclease III [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178465641|dbj|BAG20161.1| putative endonuclease III [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 248
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 115/205 (56%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 3 RRARRINRELAEVYPYAHPELDFRNPFELLVATVLSAQTTDLRVNQTTPALFAAYPTPED 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M A ++++ IR G +R K+++++ LS L ++F ++P L+ L +LPG+GRK AN
Sbjct: 63 MAAAVPEEMEEIIRPTGFFRAKTKSLLGLSAALRDDFGGEVPGRLKDLVKLPGVGRKTAN 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P I VDTH R+ R + P KVE + I P + +V HG
Sbjct: 123 VVLGNAFGVPGITVDTHFGRLVRRWKWTDEEDPVKVEAVVAGIFPKSEWTMLSHRVVFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C I+ LC +
Sbjct: 183 RRICHARKPACGACPIAPLCPSYGE 207
>gi|221135178|ref|ZP_03561481.1| Endonuclease III [Glaciecola sp. HTCC2999]
Length = 210
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P+ EL Y + F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKEKRREILTRLCANNPKPETELNYSSPFELLIAVILSAQATDVGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G L+ YI+TIG++ K+EN+I H+L+ ++P+ E L LPG+GRK
Sbjct: 61 PQAIADLGVDGLKEYIKTIGLFNAKAENVIKTCHMLVELHGGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VEQ LL++IP + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDHVEQKLLKVIPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|255305554|ref|ZP_05349726.1| endonuclease III [Clostridium difficile ATCC 43255]
Length = 405
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 2/225 (0%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+SK++ S K++ +I +P K EL Y F L++A +LSAQ T
Sbjct: 178 TSKETKSKSKIKNESA--NEKDVNKILDELEKLYPDAKCELNYGTAFELLIATILSAQCT 235
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VNK T LF+ +T + + +++ I++ G+Y+ KS+ I S L +D +
Sbjct: 236 DVRVNKVTSELFKKYNTARDFANLSIEEISKEIKSCGLYKSKSQKIKDTSEQLCELYDGE 295
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P +LE L +LPG+GRK A V+LS AF P I VDTH+FR+SNRIG+ P K E +L
Sbjct: 296 VPDSLEKLIKLPGVGRKTAGVVLSNAFNHPAIAVDTHVFRVSNRIGIVDEPNPQKTEFAL 355
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ IP + ++H+ L+ HGR +CKAR P+C SC I C K+
Sbjct: 356 MEAIPKERWSHSHHVLIFHGRRMCKARNPECASCPIKEDCNYYKE 400
>gi|71906794|ref|YP_284381.1| DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica
RCB]
gi|71846415|gb|AAZ45911.1| DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica
RCB]
Length = 210
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 145/203 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E+ + P+P EL+Y F L++AV+LSAQ+TDV VNKAT LF +A T
Sbjct: 1 MKKANIEQFYSRLRDANPAPTTELHYATPFQLLIAVILSAQATDVGVNKATLRLFPVAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+GE+ L YI+TIG++R K++N+++ +L+ + ++P E L LPG+GRK
Sbjct: 61 PEAMLALGEEGLTEYIKTIGLFRTKAKNVMATCRMLVEQHGGEVPDDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR GLAPGKT +VEQ LLR+ P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRLGNRTGLAPGKTVQEVEQKLLRVTPDEFKKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY+CKARKP+C C++ +LC
Sbjct: 181 LHGRYICKARKPECSRCVVLDLC 203
>gi|297159230|gb|ADI08942.1| putative endonuclease III [Streptomyces bingchenggensis BCW-1]
Length = 376
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 111/200 (55%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+ M A
Sbjct: 111 INRELAETYPYAHPELDFENPFQLLVATVLSAQTTDLRVNQTTPALFAAYPTPEDMAAAD 170
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ L+ IR G +R K+++++ LS L + F ++P LE L LPG+GRK ANV+L
Sbjct: 171 PEALEQLIRPTGFFRAKAKSLLGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLGN 230
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG+P + VDTH R+ R + P KVE + + P + ++ HGR VC
Sbjct: 231 AFGVPGLTVDTHFGRLVRRWKWTGQEDPEKVEAEIAALFPKSEWTMLSHRIIFHGRRVCH 290
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
ARKP C +C I+ LC +
Sbjct: 291 ARKPACGACPIAPLCPSYGE 310
>gi|78485374|ref|YP_391299.1| endonuclease III [Thiomicrospira crunogena XCL-2]
gi|78363660|gb|ABB41625.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Thiomicrospira crunogena XCL-2]
Length = 210
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF S P P+ EL Y F L++AV+LSAQ+TD VN AT LF +A+T
Sbjct: 1 MNKQKRLEIFQRLSEAIPEPETELNYSTPFELLIAVILSAQATDKGVNIATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+GE+ L+ YI+TIG++ K NII +LI+ ++++P + L LPG+GRK
Sbjct: 61 PEAIYALGEEGLKEYIKTIGLFNTKGANIIKTCKMLIDLHNSQVPDNRKDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+SNR LAPGK +VEQ LL+ +P ++ AH+ L+
Sbjct: 121 TANVVLNTAFGHPTMAVDTHIFRVSNRTKLAPGKNVLEVEQKLLKNVPKEYIIPAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C I +LC+ ++
Sbjct: 181 LHGRYTCTARKPRCGACCIYDLCEYKEK 208
>gi|51893925|ref|YP_076616.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|51857614|dbj|BAD41772.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 126/204 (61%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ E I +P K L + N F L+VA +LSAQ TD VN T +F + P+
Sbjct: 7 DTEAILRKLEEMYPDAKCALNHRNAFELLVATVLSAQCTDARVNIVTARIFPRYNRPEHF 66
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A+ ++ IR G+++ K++NI LS +L+ + ++P T+E L +LPG+GRK ANV
Sbjct: 67 AALSVDEIGEMIRDCGLWKSKAKNIQGLSQMLLEKHGGEVPSTMEELIQLPGVGRKTANV 126
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AFGIP I VDTH+FR++NR+GLA KTP + E+ L+ IP ++ AH+WL+ HGR
Sbjct: 127 VLSNAFGIPAIAVDTHVFRVANRLGLAEAKTPEETERQLMERIPREYWSQAHHWLIYHGR 186
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VC AR PQC C + C+ +Q
Sbjct: 187 QVCHARNPQCSQCPLLPHCRFGRQ 210
>gi|15602246|ref|NP_245318.1| hypothetical protein PM0381 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720628|gb|AAK02465.1| Nth [Pasteurella multocida subsp. multocida str. Pm70]
Length = 210
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKQKRI-EILTRLRDHNPHPTTELNYSSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG+Y K+ENII LI + + +IP+ L L G+GR
Sbjct: 60 TPQAILDLGLDGLKEYIKTIGLYNSKAENIIKTCRDLIEKHNGEIPENRSALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|257057561|ref|YP_003135393.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Saccharomonospora viridis DSM 43017]
gi|256587433|gb|ACU98566.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Saccharomonospora viridis DSM 43017]
Length = 256
Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ ++ ++ S L + + + +P+ EL + L+VAV+LSAQ T
Sbjct: 8 APRQGRAFAEQSRLSLVR---RARRMKRCLDVAYPNAHCELNFSTPLELLVAVILSAQCT 64
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN+ T LF + A +L+ IR G +R K+ ++I L L+ +
Sbjct: 65 DERVNQVTPALFARYPSAADYAAADRAELEELIRPAGFFRNKASSLIRLGAALVERHGGE 124
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P TLE L RLPG+GRK ANV+L AFG+P I VDTH R++ R P K+E +
Sbjct: 125 VPGTLEELVRLPGVGRKTANVVLGEAFGVPGITVDTHFSRLTRRWLWTDSDDPVKIEHEV 184
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P K + ++ HGR +C ARKP C +C ++ C
Sbjct: 185 GELFPRKEWTMLSHRVIFHGRRICHARKPACGACPLAKDCPSY 227
>gi|218290429|ref|ZP_03494559.1| endonuclease III [Alicyclobacillus acidocaldarius LAA1]
gi|218239557|gb|EED06751.1| endonuclease III [Alicyclobacillus acidocaldarius LAA1]
Length = 220
Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 122/200 (61%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +P + +L++ F L+VA +LSAQ TD VN T LF P+
Sbjct: 11 RVVERLLEAYPDARCQLHFTTPFELLVATILSAQCTDERVNMVTPRLFAKYRGPEGFAKA 70
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ IR +G++R KS++I+ + IL++E+ ++P++ + L LPG+GRK ANV++S
Sbjct: 71 SPDEVAEDIREVGLFRSKSKHIVETARILVDEYGGEVPKSRDRLMELPGVGRKTANVVVS 130
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
A+G+P VDTH+ R++NRIGLA P K EQ + +PP+ AH+ L+LHGR VC
Sbjct: 131 NAYGVPAFAVDTHVQRVTNRIGLAQSNDPLKTEQQVCAKLPPELWTKAHHALILHGRRVC 190
Query: 207 KARKPQCQSCIISNLCKRIK 226
ARKP+C C +++LC+ +
Sbjct: 191 TARKPKCHICPVADLCQYAR 210
>gi|229845224|ref|ZP_04465357.1| endonuclease III [Haemophilus influenzae 6P18H1]
gi|229811819|gb|EEP47515.1| endonuclease III [Haemophilus influenzae 6P18H1]
Length = 211
Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + ++P+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|315634432|ref|ZP_07889719.1| endonuclease III [Aggregatibacter segnis ATCC 33393]
gi|315477022|gb|EFU67767.1| endonuclease III [Aggregatibacter segnis ATCC 33393]
Length = 211
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKEKRIEILKRLRAANPHPTTELNFSSPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LA+G L+ YI+TIG++ K+ENII LI +++ ++P+ E L L G+GRK
Sbjct: 61 PQAILALGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKYNGEVPEDREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APGK KVE+ L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVCNRTGFAPGKDVVKVEEKLIKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGACMIEDLCEYKNK 208
>gi|88859820|ref|ZP_01134459.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas tunicata D2]
gi|88817814|gb|EAR27630.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas tunicata D2]
Length = 210
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P+ EL Y + F L+VAV LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNKEKRHEILVRLRENNPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LAIG L++YI+TIG++ K+ N+ + IL+++ + ++P+ E L LPG+GRK
Sbjct: 61 PQAILAIGHDTLRDYIKTIGLFNSKAANVYKMCQILVDKHNGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR A GK +VE+ L +++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKDVVEVEKKLDKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPKCGSCIIEDLCEFKEK 208
>gi|156975241|ref|YP_001446148.1| endonuclease III [Vibrio harveyi ATCC BAA-1116]
gi|156526835|gb|ABU71921.1| hypothetical protein VIBHAR_02970 [Vibrio harveyi ATCC BAA-1116]
Length = 217
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 99/206 (48%), Positives = 142/206 (68%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKVKRI-EILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+GR
Sbjct: 60 TPQGILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEEKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+LHGRY C ARKP+C SCII +LC+
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEY 205
>gi|319776065|ref|YP_004138553.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae F3047]
gi|319896874|ref|YP_004135069.1| DNA glycosylase and apyrimidinic (ap) lyase (endonuclease iii)
[Haemophilus influenzae F3031]
gi|301170444|emb|CBW30051.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae 10810]
gi|317432378|emb|CBY80733.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae F3031]
gi|317450656|emb|CBY86876.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae F3047]
Length = 211
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + +IP+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|91775204|ref|YP_544960.1| endonuclease III [Methylobacillus flagellatus KT]
gi|91775348|ref|YP_545104.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methylobacillus flagellatus KT]
gi|91709191|gb|ABE49119.1| endonuclease III [Methylobacillus flagellatus KT]
gi|91709335|gb|ABE49263.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methylobacillus flagellatus KT]
Length = 219
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P++ E+F SL P P EL + + F L++AV+LSAQ+TD VN AT LF +A+T
Sbjct: 1 MNPEKCRELFRRLSLAIPEPTTELVHASTFELLIAVILSAQATDKGVNIATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG+YR K++NI++ +L+ ++ ++P T E L LPG+GRK
Sbjct: 61 PQAILDLGIEGLEGYIKTIGLYRSKAKNIMATCRLLVERYNGEVPNTREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR+ NRIGLAPGKTP +VE L++++P ++ +AH+ L+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRLGNRIGLAPGKTPLEVENKLMKVVPKEYLRDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C C+I +LC+ +
Sbjct: 181 LHGRYVCVARKPKCGECVIYDLCEFKAK 208
>gi|218708967|ref|YP_002416588.1| endonuclease III [Vibrio splendidus LGP32]
gi|218321986|emb|CAV17995.1| Endonuclease III [Vibrio splendidus LGP32]
Length = 211
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNVKRV-EILERLRENNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G L+ YI+TIG++ K+EN I +L++ + ++P+ L LPG+GR
Sbjct: 60 TPQAIFDLGVDGLKEYIKTIGLFNSKAENTIKTCRMLLDLHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VE LL++IP + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEAKLLKVIPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|84393400|ref|ZP_00992159.1| endonuclease III [Vibrio splendidus 12B01]
gi|84376009|gb|EAP92898.1| endonuclease III [Vibrio splendidus 12B01]
Length = 211
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNVKRV-EILERLRENNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYPMAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G L+ YI+TIG++ K+EN I +L++ + ++P+ L LPG+GR
Sbjct: 60 TPQAIFDLGVDGLKEYIKTIGLFNSKAENTIKTCRMLLDLHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VE LL++IP + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEAKLLKVIPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|114319970|ref|YP_741653.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226364|gb|ABI56163.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Alkalilimnicola ehrlichii MLHE-1]
Length = 211
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ +F P P EL Y F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MTKAKINALFSRLRAHMPEPTTELEYGTPFELLVAVALSAQATDVSVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE+ L++YIR IG+Y K+ NII IL+ ++P+ + L LPG+GRK
Sbjct: 61 PEAILELGEEGLKDYIRHIGLYNSKAANIIKTCRILLERHGGEVPRDRKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR+SNR GLAPG T +VE L+R++P + + +AH+WL+
Sbjct: 121 TANVILNTAFGEPTIAVDTHIFRVSNRTGLAPGNTVRQVEDKLIRVVPDEFKRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C +C+I +LC+
Sbjct: 181 LHGRYTCVARKPRCGACVIEDLCEF 205
>gi|126667563|ref|ZP_01738533.1| endonuclease III [Marinobacter sp. ELB17]
gi|126627989|gb|EAZ98616.1| endonuclease III [Marinobacter sp. ELB17]
Length = 212
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P P EL Y ++F L++AV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNKQKRTEIFSRLREENPKPVTELNYSSNFELLIAVILSAQATDVGVNKATNKLYSVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+ N+I LI+ +++P+T E L LPG+GRK
Sbjct: 61 PEAIFALGVDGLKEYIKTIGLFNSKAGNVIKTCRALIDRHASQVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG + VDTHIFR+SNR G+APGK +VE+ L+R++P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQIAMAVDTHIFRVSNRTGIAPGKNVLEVEKRLIRLVPQEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGACLIEDLCEFKDK 208
>gi|238023043|ref|ZP_04603469.1| hypothetical protein GCWU000324_02966 [Kingella oralis ATCC 51147]
gi|237865426|gb|EEP66566.1| hypothetical protein GCWU000324_02966 [Kingella oralis ATCC 51147]
Length = 212
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+EIF P P EL++ + F L++AVLLSAQ+TD VNKAT+ LF +A+T
Sbjct: 1 MNKHTRQEIFERLRAANPHPTTELHFSSPFELLIAVLLSAQATDKGVNKATEKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G ++ Y++TIG+Y+ KS++I+ L+ + ++PQT E L L G+GRK
Sbjct: 61 PQAMLDLGLDGVREYVKTIGLYQTKSKHIMQTCRALLEQHGGEVPQTREELEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR++NR GLA GKT +VE L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVANRTGLARGKTVREVEDKLMKYVPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKA KPQCQ+CII++LC+ +
Sbjct: 181 LHGRYTCKAIKPQCQTCIINDLCEYGAK 208
>gi|92115794|ref|YP_575523.1| endonuclease III [Nitrobacter hamburgensis X14]
gi|91798688|gb|ABE61063.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter hamburgensis
X14]
Length = 262
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 111/225 (49%), Positives = 163/225 (72%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ + + +P +T E+ E F F P PKGEL ++N +TL+VAV+LSAQ+T
Sbjct: 36 ARRSARGSAAPTPPLRPWTVAEIREAFVRFRNANPEPKGELEHLNPYTLLVAVVLSAQAT 95
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VNKAT+ LF +ADTP +MLA+GE+K++++I+TIG+YR K+ NII+LS L+ +F+ +
Sbjct: 96 DAGVNKATRALFAVADTPARMLALGEEKVRDHIKTIGLYRNKARNIIALSEKLLADFNGE 155
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P++ G+ LPG GRK ANV+L+MAFG T+ VDTH+FR+ NR G+APGKTP +VE L
Sbjct: 156 VPRSRAGIESLPGAGRKTANVVLNMAFGEHTMAVDTHVFRVGNRTGMAPGKTPLEVELGL 215
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
R+IP + +AH+WL+LHGRY C AR P+C C+I++LC+ ++
Sbjct: 216 ERVIPDEFMLHAHHWLILHGRYTCLARSPRCAVCLINDLCRWPEK 260
>gi|320104624|ref|YP_004180215.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Isosphaera pallida ATCC 43644]
gi|319751906|gb|ADV63666.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Isosphaera pallida ATCC 43644]
Length = 314
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 4/224 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+SK S + P G I ++P + L + N F L+ A +LSAQ T
Sbjct: 75 ASKTSRAGTPRRPQGA---KVRAALILERLIARYPEARCALTHQNPFQLLAATILSAQCT 131
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VN T LF P + +++ IR+ G Y K+ N+I ++ ++
Sbjct: 132 DVRVNLTTPALFARFPDPASLARADLAEVETLIRSTGFYHNKALNLIGMARAIVEHHGGV 191
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+P + LT LPG+GRK ANV++ AFG + VDTH+ R++ R+GL P K+E+
Sbjct: 192 VPDNYDALTALPGVGRKTANVVMGDAFGRAEGVVVDTHVKRLAFRMGLTRHHDPIKIERD 251
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ I+P + ++ HGR C ARKP+C+SCI+++LC ++
Sbjct: 252 LMAILPRDQWVGFSHRMIFHGRDTCDARKPRCESCILADLCPKV 295
>gi|320156878|ref|YP_004189257.1| endonuclease III [Vibrio vulnificus MO6-24/O]
gi|319932190|gb|ADV87054.1| endonuclease III [Vibrio vulnificus MO6-24/O]
Length = 213
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRIQILERLRENNPNPQTELNWNSPFELLIAVLLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG++ K+EN I IL+ + + ++P+ + L LPG+GRK
Sbjct: 61 PQAILDLGVEGLKEYIKTIGLFNSKAENTIKTCRILLEKHNGEVPEDRDALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR APGK ++VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAPGKNVDEVEQKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|260773222|ref|ZP_05882138.1| predicted EndoIII-related endonuclease [Vibrio metschnikovii CIP
69.14]
gi|260612361|gb|EEX37564.1| predicted EndoIII-related endonuclease [Vibrio metschnikovii CIP
69.14]
Length = 213
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNNAKRLAILERLRANNPNPQTELNWNTPFELLIAVLLSAQATDVSVNKATDKLYAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G ++ YI+TIG++ K+EN+I IL++++ +IP+ L LPG+GRK
Sbjct: 61 PQAIWDLGVDGVKQYIKTIGLFNSKAENVIKTCRILLDQYGGEIPEDRAALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VEQ LL+++P + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAIGKNVDEVEQKLLKVVPKAFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|292671021|ref|ZP_06604447.1| endonuclease III [Selenomonas noxia ATCC 43541]
gi|292647338|gb|EFF65310.1| endonuclease III [Selenomonas noxia ATCC 43541]
Length = 210
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 134/207 (64%), Gaps = 1/207 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E + +P+ + L + F L++AV+LSAQ TDV VN T LF A
Sbjct: 1 MRVTKAIKAEQLRILRELYPNARPALEFKTPFELLIAVILSAQCTDVRVNIVTSRLFPRA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+TP+ + ++G+ +L+ I G +R K+++I+ IL+ E+ ++P E L +LPG+G
Sbjct: 61 NTPEAIASLGQAELEAAIHDCGFFRMKAKHILETCDILLQEYGGEVPADFEALQKLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+AF +P I VDTH+FR++NR+ LA GKTP +VE+ L + IP +AH+W
Sbjct: 121 RKTANVVMSVAFRVPAIAVDTHVFRVANRLHLAVGKTPLEVEKGLQKAIPRADWSDAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGR +CKARKP C C +S +C
Sbjct: 181 LILHGRQICKARKPLCGDCPLSFICPS 207
>gi|311104714|ref|YP_003977567.1| endonuclease III [Achromobacter xylosoxidans A8]
gi|310759403|gb|ADP14852.1| endonuclease III [Achromobacter xylosoxidans A8]
Length = 211
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P EL Y F L++AVLLSAQ+TD +VN AT+ F T
Sbjct: 1 MNAAKRREIFARLQAANPHPTTELEYDTPFQLLIAVLLSAQATDKSVNIATRKFFPAYGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LA+GE L +YI+TIG+YR K++N I+ ILI + ++PQT E L LPG+GRK
Sbjct: 61 PQALLALGEAGLADYIKTIGLYRTKAKNTIATCKILIEQHGGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+SNR G+APGK +VEQ L + +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVSNRTGIAPGKNVLEVEQKLEKFVPREYMQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+C ARKP+C C IS+LC+ ++
Sbjct: 181 LLGRYICVARKPKCPQCGISDLCEFKQK 208
>gi|262375912|ref|ZP_06069143.1| endonuclease III [Acinetobacter lwoffii SH145]
gi|262309006|gb|EEY90138.1| endonuclease III [Acinetobacter lwoffii SH145]
Length = 237
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 143/211 (67%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ L T K+++ F + P+PK EL Y N F L+VAV LSAQ+TDV+VNKAT
Sbjct: 4 AKAKLVKNMTKKQIQTFFERLREQRPNPKTELNYSNPFELLVAVTLSAQATDVSVNKATD 63
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF +A+TP+ + A+G L+ YI+TIG+Y K+ N+I +LI + ++ +P L
Sbjct: 64 KLFPVANTPEAIYALGVDGLKEYIKTIGLYNSKAVNVIKACEMLIQKHNSIVPDNRADLE 123
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP +
Sbjct: 124 ALPGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAVGKNVLEVEHRLVKVIPKEFI 183
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++H+WL+LHGRY C ARKP+C C++S++C
Sbjct: 184 IDSHHWLILHGRYTCIARKPKCHECVVSDVC 214
>gi|254427969|ref|ZP_05041676.1| endonuclease III [Alcanivorax sp. DG881]
gi|196194138|gb|EDX89097.1| endonuclease III [Alcanivorax sp. DG881]
Length = 212
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 148/205 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P P EL Y + F L+VAV+LSAQ+TDV VNKAT L+ +A+T
Sbjct: 1 MNREKRTEIFSRLRAQNPHPTTELEYQSDFELLVAVVLSAQATDVGVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+ENII L ILI + D+++P+T E L LPG+GRK
Sbjct: 61 PEAIFALGVDGLKEYIKTIGLFNSKAENIIQLCRILIEQHDSQVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ A+G PT+ VDTHIFR+SNR +APGK +VE+ L+R++P + +AH+WL+
Sbjct: 121 TANVVLNTAYGYPTMAVDTHIFRVSNRTRIAPGKNVLEVEKRLVRLVPEEFLRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP+C C+I++LC+
Sbjct: 181 LHGRYVCIARKPKCGDCLIADLCEF 205
>gi|312143859|ref|YP_003995305.1| endonuclease III [Halanaerobium sp. 'sapolanicus']
gi|311904510|gb|ADQ14951.1| endonuclease III [Halanaerobium sp. 'sapolanicus']
Length = 216
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 133/211 (63%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +++E + LF+ +P P L +F L++A +LSAQ+TDV VNK T LF+
Sbjct: 1 MKTINKEEKVESLLELFAEHYPEPGTTLDSTTNFELLIATILSAQTTDVQVNKVTAELFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+TP+ A+ +K+L+ I +IG+YR K++ II S IL+ E+D ++P + L +L G
Sbjct: 61 EYNTPEDFAALSKKELEKKINSIGLYRNKAKYIIKTSQILLEEYDGEVPHKRKELLKLAG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+ AF VDTH+FR+S+R+ L+ K P E+ L +IP K+ + H
Sbjct: 121 VGRKTANVVLANAFDKAAFPVDTHVFRVSSRLALSSAKNPEVTEKELTELIPKKYWIDLH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+WL+ HGR +CKA+ P C +C S+LC K
Sbjct: 181 HWLIDHGRAICKAQNPDCDNCFCSHLCPYYK 211
>gi|256397952|ref|YP_003119516.1| endonuclease III [Catenulispora acidiphila DSM 44928]
gi|256364178|gb|ACU77675.1| endonuclease III [Catenulispora acidiphila DSM 44928]
Length = 251
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 3/218 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + + + +I+ S +P K EL + N + L+ AV+LSAQSTDV V
Sbjct: 11 TRVAKPETHTALVR---RARKIYRELSGVYPYAKCELDFENPYQLLTAVILSAQSTDVGV 67
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NK T LF+ TP + A ++L+ I+ G + K+++++ +S ++++F ++P
Sbjct: 68 NKVTPALFQRYPTPADLAAADPEELEALIKPTGFFHNKAKSLLGMSKSVVSDFGGQVPGR 127
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L L +LPG+GRK ANV+L AFG+P I VDTH R+ R G + P KVE ++ +
Sbjct: 128 LNDLVKLPGVGRKTANVVLGDAFGVPGITVDTHFGRLVRRFGWTGLEDPVKVEHAIGEMF 187
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P K + L+ HGR VC A++P C +C I+ LC
Sbjct: 188 PRKDWTLLSHRLIYHGRRVCHAKRPACGACPIAKLCPS 225
>gi|91206121|ref|YP_538476.1| endonuclease III [Rickettsia bellii RML369-C]
gi|91069665|gb|ABE05387.1| Endonuclease III [Rickettsia bellii RML369-C]
Length = 315
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 111/207 (53%), Positives = 155/207 (74%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +IF +FS +PK EL Y N+FTL+VAV+LSAQ+TDV+VN ATK LFEI DT
Sbjct: 103 MQAEIVNKIFEVFSKNNENPKTELVYKNNFTLLVAVILSAQATDVSVNLATKSLFEIYDT 162
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K+L +GE+ L+ YI++IG++ K++N+I+L ILI+ +D+K+P E L +LPG+GRK
Sbjct: 163 PEKILGLGEEGLKKYIKSIGLFNSKAKNVIALCQILISNYDSKVPNNFEELVKLPGVGRK 222
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FG+PT+ VDTH+FR++ RIGLA G TP VE+ LL+II K +AH+WL+
Sbjct: 223 TANVVLNCLFGLPTMAVDTHVFRVAKRIGLAKGNTPEAVEKELLQIIDGKWLSHAHHWLI 282
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGRY+CKARKP C+ C I C+ K
Sbjct: 283 LHGRYICKARKPDCEICPIKEYCEYYK 309
>gi|333025404|ref|ZP_08453468.1| putative endonuclease III [Streptomyces sp. Tu6071]
gi|332745256|gb|EGJ75697.1| putative endonuclease III [Streptomyces sp. Tu6071]
Length = 343
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 4 SKKSDSYQGNSPLGCLYTP--------KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAV 55
+KK+ + + +P + + I + + +P EL + + F L+VA
Sbjct: 72 TKKATAKKSPAPKPPGFAKRESRAAMVERAHAINEVLAETYPYAHPELDFEDPFQLLVAT 131
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+LSAQ+TD+ VN+ T LF TP+ M A ++L+ IR G +R K+ +++ LS L
Sbjct: 132 VLSAQTTDLRVNQTTPALFAKYPTPEDMAAAVPEELEELIRPTGFFRAKARSLLGLSAAL 191
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
++FD ++P T++ L +LPG+GRK A V+L AFG+P I VDTH R++ R + P
Sbjct: 192 RDDFDGEVPATVDALVKLPGVGRKTAFVVLGNAFGVPGITVDTHFGRLARRWKWTTSEDP 251
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
KVE + I P + ++ HGR +C +R+P C +C ++ LC +
Sbjct: 252 VKVESDVAAIFEPSEWTMLSHRVIFHGRRICHSRRPACGACPVAPLCPSYGE 303
>gi|145629217|ref|ZP_01785016.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
22.1-21]
gi|145639154|ref|ZP_01794761.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
PittII]
gi|145641057|ref|ZP_01796638.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
R3021]
gi|144978720|gb|EDJ88443.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
22.1-21]
gi|145271716|gb|EDK11626.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
PittII]
gi|145274218|gb|EDK14083.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
22.4-21]
gi|309750735|gb|ADO80719.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae R2866]
Length = 211
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYSSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + +IP+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPNEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|210623502|ref|ZP_03293847.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
gi|210153560|gb|EEA84566.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
Length = 213
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 134/206 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +E++EI L +++P + EL+Y F L+VA +LSAQ TDV VNK T +F++ +T
Sbjct: 3 KSSEEIKEILDLLEIQYPDAECELHYTTPFELLVATILSAQCTDVRVNKVTDEMFKVCNT 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++ + E+++ I+T G+Y+ K++ I S IL N++++++P +LE L +LPG+GRK
Sbjct: 63 PKQFADLSEEEIGEMIKTCGLYKSKAKKIKMTSEILYNDYNSEVPDSLEELIKLPGVGRK 122
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+LS AFG P I VDTH+FRI NRIG+ TP K E L++++P + AH+ +
Sbjct: 123 TAGVVLSNAFGHPAIPVDTHVFRIVNRIGIVETSTPEKTEFELMKVLPKERWSKAHHLFI 182
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
GR +CKARKP+C C I C
Sbjct: 183 FLGRRMCKARKPECTDCPIKKHCNYF 208
>gi|27366367|ref|NP_761895.1| endonuclease III [Vibrio vulnificus CMCP6]
gi|27362568|gb|AAO11422.1| endonuclease III [Vibrio vulnificus CMCP6]
Length = 213
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRIQILERLRENNPNPQTELNWNSPFELLIAVLLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + L+ YI+TIG++ K+EN I IL+ + + ++P+ + L LPG+GRK
Sbjct: 61 PQAMLDLGVEGLKEYIKTIGLFNSKAENTIKTCRILLEKHNGEVPEDRDALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR APGK ++VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAPGKNVDEVEQKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|16273576|ref|NP_439831.1| endonuclease III [Haemophilus influenzae Rd KW20]
gi|145631604|ref|ZP_01787370.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
R3021]
gi|260581030|ref|ZP_05848852.1| endonuclease III [Haemophilus influenzae RdAW]
gi|1169526|sp|P44319|END3_HAEIN RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|1574542|gb|AAC23335.1| endonuclease III (nth) [Haemophilus influenzae Rd KW20]
gi|144982804|gb|EDJ90330.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
R3021]
gi|260092270|gb|EEW76211.1| endonuclease III [Haemophilus influenzae RdAW]
Length = 211
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + ++P+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPNEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|30250155|ref|NP_842225.1| HhH-GPD:Iron-sulfur cluster loop (FCL) [Nitrosomonas europaea ATCC
19718]
gi|30139262|emb|CAD86135.1| HhH-GPD:Iron-sulfur cluster loop (FCL) [Nitrosomonas europaea ATCC
19718]
Length = 223
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 153/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K EIF F P P EL Y F L++AV+LSAQ+TD +VN AT+ LF +AD
Sbjct: 1 MNTTKR-REIFTRFRAANPRPTTELEYQTPFQLLIAVILSAQATDKSVNLATRKLFLVAD 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+K+L +GE L +I+ IG++R K+ NI++ +LI +++ ++P+T L +LPG+GR
Sbjct: 60 TPEKILQLGETGLSPFIQRIGLFRTKTRNILATCQLLIEQYNGEVPRTRTELEKLPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+VIL+ AFG PTI VDTHIFR++NRIG+APGK +VE+ LL+++P + +++AH+WL
Sbjct: 120 KTASVILNTAFGEPTIAVDTHIFRVANRIGIAPGKNVLEVERKLLKVVPDEFRHDAHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+CKARKP C C+I +LC+ ++
Sbjct: 180 ILHGRYICKARKPLCHQCLIVDLCEFKEK 208
>gi|255654585|ref|ZP_05399994.1| endonuclease III [Clostridium difficile QCD-23m63]
gi|296449359|ref|ZP_06891141.1| endonuclease III [Clostridium difficile NAP08]
gi|296880707|ref|ZP_06904659.1| endonuclease III [Clostridium difficile NAP07]
gi|296261829|gb|EFH08642.1| endonuclease III [Clostridium difficile NAP08]
gi|296428280|gb|EFH14175.1| endonuclease III [Clostridium difficile NAP07]
Length = 285
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 123/207 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K++ +I +P K EL Y F L++A +LSAQ TDV VNK T LF+ +T
Sbjct: 74 NEKDVNKILDELEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTA 133
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++ I++ G+Y+ KS+ I S L +D ++P +LE L +LPG+GRK
Sbjct: 134 KDFANLSIEEISKEIKSCGLYKSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKT 193
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+LS AF P I VDTH+FR+SNRIG+ P K E +L+ IP + ++H+ L+
Sbjct: 194 AGVVLSNAFNHPAIAVDTHVFRVSNRIGIVDEPNPQKTEFALMEAIPKERWSHSHHVLIF 253
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +CKAR P+C SC I C K+
Sbjct: 254 HGRRMCKARNPECASCPIKEDCNYYKE 280
>gi|229847310|ref|ZP_04467412.1| endonuclease III [Haemophilus influenzae 7P49H1]
gi|229809735|gb|EEP45459.1| endonuclease III [Haemophilus influenzae 7P49H1]
Length = 211
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + +IP+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAPGKDVVKVEEKLLKVVPNEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|163757723|ref|ZP_02164812.1| probable endonuclease iii protein [Hoeflea phototrophica DFL-43]
gi|162285225|gb|EDQ35507.1| probable endonuclease iii protein [Hoeflea phototrophica DFL-43]
Length = 277
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 119/222 (53%), Positives = 169/222 (76%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
K + + Y+ E+ EIF FS++ P PKGEL +VN FTL+VAV LSAQ+TD
Sbjct: 40 KPKTKRAARRRKNPYSEAEIREIFRRFSVQRPEPKGELEHVNPFTLVVAVALSAQATDAG 99
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VNKAT+ LF +ADTP+KMLA+GE K+++ I+TIG+YR K++N+I+LS L+++F ++P+
Sbjct: 100 VNKATRGLFALADTPEKMLALGEDKVRDLIKTIGLYRNKAKNVIALSQKLVDDFGGEVPR 159
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
T L LPG+GRK ANV+ SMAFGIPT+ VDTH+ RI NR+ +APGKTP++VE + L I
Sbjct: 160 TEAELVTLPGVGRKTANVVRSMAFGIPTLAVDTHVLRIGNRLNIAPGKTPDEVEAAFLAI 219
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
IP + ++AH+WL+LHGRY CKARKP+C+ C+I+++CK ++
Sbjct: 220 IPEDYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEK 261
>gi|113461208|ref|YP_719277.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Haemophilus somnus 129PT]
gi|170717806|ref|YP_001784869.1| endonuclease III [Haemophilus somnus 2336]
gi|112823251|gb|ABI25340.1| DNA-(apurinic or apyrimidinic site) lyase [Haemophilus somnus
129PT]
gi|168825935|gb|ACA31306.1| endonuclease III [Haemophilus somnus 2336]
Length = 211
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL++ F L++AV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MNKQKRI-EILTRLRDQNPHPTTELHFNTPFELLIAVILSAQATDKGVNKATDKLFPLAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G +L+ YI+TIG+Y K+ENII LI + + ++P+ E L L G+GR
Sbjct: 60 TPQAILDLGLDELKKYIKTIGLYNSKAENIIKTCRDLIEKHNGQVPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVIKVEEKLLKVVPSEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|269102193|ref|ZP_06154890.1| endonuclease III [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162091|gb|EEZ40587.1| endonuclease III [Photobacterium damselae subsp. damselae CIP
102761]
Length = 215
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I + P P+ EL + F L++AVLLSAQ+TDV+VNKA L+ IA+
Sbjct: 1 MNNQKRVQ-ILERLRAENPHPQTELNWSTPFELLIAVLLSAQATDVSVNKAIDKLYPIAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G L+ YI+TIG++ K+EN+I IL+++ + ++P+ + L LPG+GR
Sbjct: 60 TPQAIFDLGVDGLKTYIKTIGLFNTKAENVIKTCRILLDQHNGEVPEDRQALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK ++VEQ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAEGKNVDQVEQKLLKVVPAEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|145633623|ref|ZP_01789350.1| endonuclease III [Haemophilus influenzae 3655]
gi|145635454|ref|ZP_01791155.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
PittAA]
gi|145637628|ref|ZP_01793283.1| endonuclease III [Haemophilus influenzae PittHH]
gi|148825767|ref|YP_001290520.1| endonuclease III [Haemophilus influenzae PittEE]
gi|148827112|ref|YP_001291865.1| endonuclease III [Haemophilus influenzae PittGG]
gi|260582787|ref|ZP_05850573.1| endonuclease III [Haemophilus influenzae NT127]
gi|329123228|ref|ZP_08251796.1| endonuclease III [Haemophilus aegyptius ATCC 11116]
gi|144985500|gb|EDJ92316.1| endonuclease III [Haemophilus influenzae 3655]
gi|145267328|gb|EDK07331.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
PittAA]
gi|145269151|gb|EDK09099.1| endonuclease III [Haemophilus influenzae PittHH]
gi|148715927|gb|ABQ98137.1| molybdate transporter ATP-binding subunit [Haemophilus influenzae
PittEE]
gi|148718354|gb|ABQ99481.1| endonuclease III [Haemophilus influenzae PittGG]
gi|260094113|gb|EEW78015.1| endonuclease III [Haemophilus influenzae NT127]
gi|327471437|gb|EGF16885.1| endonuclease III [Haemophilus aegyptius ATCC 11116]
Length = 211
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + +IP+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEIPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPNEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|117618163|ref|YP_857149.1| endonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559570|gb|ABK36518.1| endonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 213
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNNQKRRQILERLRDDNPHPTTELNFKTPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G ++ YI+TIG++ K+EN+I IL+ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLELGVDGVKEYIKTIGLFNTKAENVIKTCAILLELHGGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAVGKNVDQVEEKLLKVVPAEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEYKEK 208
>gi|302879571|ref|YP_003848135.1| endonuclease III [Gallionella capsiferriformans ES-2]
gi|302582360|gb|ADL56371.1| endonuclease III [Gallionella capsiferriformans ES-2]
Length = 211
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +IF P PK EL Y F L++AV+LSAQ+TD++VN AT+HL+ +A+T
Sbjct: 1 MNADKRRKIFERLQKANPHPKTELEYTTPFELLIAVMLSAQATDISVNAATRHLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE+KL YI+ IG+Y+ K+ ++I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PEALLDLGEEKLTEYIQRIGLYKTKARHVIQTCRMLVELHNSQVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG + VDTHIFRISNRIGLAPGK +VE L+++IP + +AH+WL+
Sbjct: 121 TANVILNTAFGQAAMAVDTHIFRISNRIGLAPGKNVLEVEHKLMKVIPKEFILDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C+AR P+C C+I +LC+ ++
Sbjct: 181 LHGRYICRARTPKCAECLIYDLCEYPQK 208
>gi|288942209|ref|YP_003444449.1| endonuclease III [Allochromatium vinosum DSM 180]
gi|288897581|gb|ADC63417.1| endonuclease III [Allochromatium vinosum DSM 180]
Length = 212
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +IF P+P+ EL Y F L++AV+LSAQ+TD +VN+AT LF ADT
Sbjct: 1 MNADKRHQIFARLRNANPTPRTELVYRTPFELLIAVMLSAQATDRSVNQATAGLFAHADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+GE L+ +IR IG++ K+ +I+ +LI +P+ L LPG+GRK
Sbjct: 61 PEAILALGEDGLKAHIRAIGLFNTKARHILQTCALLIERHGGAVPRDRAALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PT+ VDTHIFR++NR GLAPGKTP VEQ LL +P + ++AH+WL+
Sbjct: 121 TANVILNTAFGEPTMAVDTHIFRVANRTGLAPGKTPLAVEQGLLDQVPGEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP+C C+I++LC
Sbjct: 181 LHGRYVCTARKPRCPQCLIADLCDY 205
>gi|319943294|ref|ZP_08017577.1| endonuclease III [Lautropia mirabilis ATCC 51599]
gi|319743836|gb|EFV96240.1| endonuclease III [Lautropia mirabilis ATCC 51599]
Length = 226
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 146/205 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+P +E+F + P P+ EL Y + + L+ AVLLSAQ+TD +VN T+ LF +A T
Sbjct: 1 MSPANRQEMFRRLAAANPDPQSELEYGSPYQLLAAVLLSAQATDKSVNIVTRRLFPLAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ M+ +G + + IRTIG++R K++N++++S ILI++ ++P L LPG+GRK
Sbjct: 61 PQAMVELGLENITEAIRTIGLFRNKAKNLLAMSQILIDQHGGEVPDDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTHIFR+SNR GLAPGK +VEQ LL+++P ++ NAH+WL+
Sbjct: 121 TANVVLNVAFGHPTIAVDTHIFRVSNRTGLAPGKNVEEVEQKLLKVVPRDYRQNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+CKAR P+C C I++LC
Sbjct: 181 LHGRYICKARTPECWRCPITDLCPY 205
>gi|90420663|ref|ZP_01228569.1| endonuclease III [Aurantimonas manganoxydans SI85-9A1]
gi|90334954|gb|EAS48715.1| endonuclease III [Aurantimonas manganoxydans SI85-9A1]
Length = 224
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 111/209 (53%), Positives = 153/209 (73%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ Y+ +E+ EIF FS++ P P EL Y N FTL+VAV+LSAQ+TD VNKAT+ LF
Sbjct: 1 MKIPYSQEEITEIFRRFSVQRPEPVSELAYTNPFTLLVAVVLSAQATDAGVNKATRELFR 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+AD M A+GE ++ +IRTIG+YR K++N+ +L+ L+ + ++P L LPG
Sbjct: 61 VADNAAAMAALGEDAIREHIRTIGLYRNKAKNVAALAETLVAQHGGEVPGDRAALEALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK A+V+L++AFG T+ VDTHIFRI NR+ LAPG TP VEQ LLRIIP ++ +AH
Sbjct: 121 VGRKTASVVLNVAFGEETLAVDTHIFRIGNRLKLAPGATPEAVEQGLLRIIPQPYRRHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRYVCKARKP C++C+I++LCK
Sbjct: 181 HWLILHGRYVCKARKPDCEACVIADLCKA 209
>gi|53802973|ref|YP_115292.1| endonuclease III [Methylococcus capsulatus str. Bath]
gi|53756734|gb|AAU91025.1| endonuclease III [Methylococcus capsulatus str. Bath]
Length = 213
Score = 155 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF + P P EL Y F L++AV+LSAQ+TD +VNKAT LF +A+T
Sbjct: 1 MNANKRRRIFERLAAAIPEPTTELRYGTPFELLIAVVLSAQATDKSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+ E+ L+ YI+TIG++ K++NII L +LI ++P+ + L LPG+GRK
Sbjct: 61 PEAILALREEGLREYIKTIGLFNSKAKNIIRLCELLIERHRGEVPRDRDALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG P I VDTHIFR++NR GLAPGKT VE++L + P + + +AH+ L+
Sbjct: 121 TANVILNTAFGQPAIAVDTHIFRVANRTGLAPGKTVLAVEKALEKHTPREFRQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C C I++LC+
Sbjct: 181 LHGRYTCIARKPKCSQCPIADLCEY 205
>gi|332297003|ref|YP_004438925.1| endonuclease III [Treponema brennaborense DSM 12168]
gi|332180106|gb|AEE15794.1| endonuclease III [Treponema brennaborense DSM 12168]
Length = 235
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 108/220 (49%), Positives = 153/220 (69%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ K + + + L P+ +EE+F F P PK EL N +TL+V+V+LSAQ+T
Sbjct: 7 ADKSAHARTHSEKPFRLLPPERIEELFERFKAANPEPKTELAAPNPYTLLVSVVLSAQAT 66
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D +VNKAT L+ ADTPQKML +GE+ L +YI++IG+YR K+++I+ LS IL E+
Sbjct: 67 DKSVNKATAALYAAADTPQKMLDLGEETLISYIKSIGLYRSKAKHIMELSRILAAEYGGG 126
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
IP+T E L +LPG+GRK ANVIL++ +G PT+ VDTH+ RIS R+GL+ G TP VE+ L
Sbjct: 127 IPRTREELQKLPGVGRKTANVILNVVYGEPTMPVDTHLLRISPRLGLSDGTTPEAVEKDL 186
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ IP ++ +AH+WL+LHGRYVC AR PQC C + ++C
Sbjct: 187 VARIPARYMQHAHHWLILHGRYVCTARNPQCAECPVGDIC 226
>gi|300310949|ref|YP_003775041.1| endonuclease III protein [Herbaspirillum seropedicae SmR1]
gi|300073734|gb|ADJ63133.1| endonuclease III protein [Herbaspirillum seropedicae SmR1]
Length = 216
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + EIF P+P EL Y F L++AVLLSAQ+TDV+VNKAT+ L+ +A+T
Sbjct: 1 MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +G +L YI+TIG+YR K++N+I ILI E ++P++ E L LPG+GRK
Sbjct: 61 PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEHGGQVPESREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR GLAPGK ++VE+ L++ + P+ + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKPQC +CII++LC+ ++
Sbjct: 181 LHGRYTCIARKPQCWNCIIADLCEFKQK 208
>gi|85713238|ref|ZP_01044264.1| Endonuclease III [Idiomarina baltica OS145]
gi|85692933|gb|EAQ30905.1| Endonuclease III [Idiomarina baltica OS145]
Length = 211
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF A T
Sbjct: 1 MNKDKRYQILSRLRDNNPNPTTELEYESPFQLLIAVLLSAQATDVGVNKATRKLFPAAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ MLA+G ++ YI+TIG++ K+EN IL+ ++D ++P++ E L LPG+GRK
Sbjct: 61 AETMLALGVDGIKEYIKTIGLFNSKAENAYKTCKILVEQYDGEVPESREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR LAPGK N+VEQ L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKLAPGKNVNEVEQKLIKVVPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCVIEDLCEFKEK 208
>gi|157962180|ref|YP_001502214.1| endonuclease III [Shewanella pealeana ATCC 700345]
gi|157847180|gb|ABV87679.1| endonuclease III [Shewanella pealeana ATCC 700345]
Length = 213
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNTEKRRQILERLRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+G + L+ YI+TIG+Y K+ N++ IL+ ++D ++P+ E L LPG+GRK
Sbjct: 61 AQAIAALGVEGLKQYIKTIGLYNNKAINVVKACEILVEKYDGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+SNR A GK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVSNRTKFAIGKNVVEVEKKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKDK 208
>gi|77360042|ref|YP_339617.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas haloplanktis TAC125]
gi|76874953|emb|CAI86174.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas haloplanktis TAC125]
Length = 216
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL Y + F L+VAV LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 6 MNKEKRHQILTRLRDDNPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L++YI+TIG++ K+ N+ + IL++E ++ +P+ E L LPG+GRK
Sbjct: 66 PQAILDLGHDTLRDYIKTIGLFNSKAANVYKMCQILVDEHNSIVPENREALEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P I VDTHIFR+SNR LA GK VEQ L +++P + + + H+WL+
Sbjct: 126 TANVVLNTAFGWPVIAVDTHIFRVSNRTKLAMGKDVVAVEQKLEKVVPKEFKVDVHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 186 LHGRYTCVARKPKCGSCIIEDLCEFKEK 213
>gi|182419857|ref|ZP_02951097.1| endonuclease III [Clostridium butyricum 5521]
gi|237666643|ref|ZP_04526628.1| endonuclease III [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376405|gb|EDT73987.1| endonuclease III [Clostridium butyricum 5521]
gi|237657842|gb|EEP55397.1| endonuclease III [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 206
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 126/205 (61%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++I + +P K EL Y L+VA +LSAQ+TD VN+ TK LF+
Sbjct: 2 KARTKKIVEILKETYPDAKCELNYETPLQLLVATVLSAQTTDKKVNEVTKELFKDYPDLD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L I +L+ I+ IG+YR KS+N+I + + +F+ ++P T+EG+T L G GRK A
Sbjct: 62 AFLEITNDELEERIKQIGLYRNKSKNLILMFRQIKEKFNGEVPTTMEGITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AFG+P+I VDTH+FR+SNR+GLA +VE+ L + +P K H+ L+ H
Sbjct: 122 NVVLSNAFGVPSIAVDTHVFRVSNRLGLAESDKVLEVEKQLQKELPKKEWTLMHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C AR P+C+ C +S++CK K
Sbjct: 182 GRRCCTARNPKCEECPLSHICKYDK 206
>gi|313201531|ref|YP_004040189.1| endonuclease III [Methylovorus sp. MP688]
gi|312440847|gb|ADQ84953.1| endonuclease III [Methylovorus sp. MP688]
Length = 210
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF S P PK EL + + F L++AV+LSAQ+TD VN AT LF +A+T
Sbjct: 1 MNAEKRHEIFRRLSEAIPEPKTELTHTSTFELLIAVILSAQATDKGVNIATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ++ +G + L++YI+TIG+YR K++N+++ +L+ ++++++P+T L LPG+GRK
Sbjct: 61 PQAIVDLGLEGLESYIKTIGLYRSKAKNVLATCRMLVEQYNSEVPRTRAALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG TI VDTHIFR+ NRIGLAPGKTP VE+ L++ +P ++ +AH+ L+
Sbjct: 121 TANVILNTAFGEATIAVDTHIFRLGNRIGLAPGKTPLDVEKKLMKTVPREYMQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C +C+I + C+ ++
Sbjct: 181 LHGRYVCVARKPKCAACVIYDQCEYKEK 208
>gi|268317002|ref|YP_003290721.1| endonuclease III [Rhodothermus marinus DSM 4252]
gi|262334536|gb|ACY48333.1| endonuclease III [Rhodothermus marinus DSM 4252]
Length = 217
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 126/205 (61%), Gaps = 1/205 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + I +P+ EL + N F L++ +LSAQ+TD VN+ + LF T +
Sbjct: 7 RRRIGAILERLREAYPNATTELRWSNPFELLIVTVLSAQTTDKKVNEVSPELFRRYPTAE 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++L+ +R +G YR+K+ I++L+ L+ ++P+++E LT LPG+GRK A
Sbjct: 67 ALAQANPEELEPLLRPLGYYRQKARTIVNLARQLVERHGGEVPRSMEALTALPGVGRKTA 126
Query: 142 NVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
++L AFG I VDTH+ R++ R+GL KTP+K+EQ L+ ++P + + LVL
Sbjct: 127 AIVLGTAFGIREGIAVDTHVSRVAQRLGLTSHKTPDKIEQDLMALVPREDWTWFGHALVL 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGRYVC AR+P+C C++++LC RI
Sbjct: 187 HGRYVCLARRPRCSQCVLADLCPRI 211
>gi|169824416|ref|YP_001692027.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302380577|ref|ZP_07269042.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|167831221|dbj|BAG08137.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302311520|gb|EFK93536.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
Length = 208
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 134/206 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ +I +P K L + F L++A +LSAQ TDV VNK T LF+ +T
Sbjct: 1 MSYDKINKILDDLDSLYPDAKAGLDFTTPFELLIATILSAQCTDVRVNKVTAVLFKEHNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G L YI++ G+Y+ KS+NII+ ++L +++D+K+P +E L +LPG+GRK
Sbjct: 61 PKSILDLGIDGLTKYIKSCGLYKTKSKNIINTCNVLYHDYDSKVPDNIEELMKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++S AF P I VDTH+FR++NRIG+ K E++L+R+IP + +H+ +
Sbjct: 121 TANVVVSNAFDTPAIAVDTHVFRVTNRIGIVNEKDVLSTEKALMRVIPKERWSKSHHLFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKAR P+C+ CI+++ CK
Sbjct: 181 WHGRNICKARNPKCEECILNDRCKFY 206
>gi|56478210|ref|YP_159799.1| endonuclease III [Aromatoleum aromaticum EbN1]
gi|56314253|emb|CAI08898.1| Endonuclease III [Aromatoleum aromaticum EbN1]
Length = 210
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E F + PSP EL Y + F L+VAV+LSAQ+TD +VN AT+ LF +A T
Sbjct: 1 MKRDAIREFFRRLAEANPSPTTELEYGSPFQLLVAVVLSAQATDKSVNLATRELFAVAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ ML++GE+ + +R+IG+YR K++N+++LS +L+ +P++ E L LPG+GRK
Sbjct: 61 PEAMLSLGEENVTERLRSIGLYRNKAKNVVALSRLLLERHGGDVPRSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V+L++ FG + VDTHIFR++NR GLAPGK VEQ+L+R +P ++ +NAH+WL+
Sbjct: 121 TASVVLNIVFGEAVMAVDTHIFRVANRTGLAPGKDVLAVEQALMRRVPKEYLHNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C+ C++ +LC+ +
Sbjct: 181 LHGRYVCTARKPRCKDCLVRDLCEFRDK 208
>gi|148977606|ref|ZP_01814182.1| endonuclease III [Vibrionales bacterium SWAT-3]
gi|145963121|gb|EDK28389.1| endonuclease III [Vibrionales bacterium SWAT-3]
Length = 211
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ IA+
Sbjct: 1 MNNVKRVQ-ILERLRENNPKPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLYPIAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G L+ YI+TIG++ K++N I +L++ + ++P+ L LPG+GR
Sbjct: 60 TPQAIFDLGVDGLKEYIKTIGLFNSKADNTIKTCRMLLDLHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEAKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|84495136|ref|ZP_00994255.1| putative endonuclease III [Janibacter sp. HTCC2649]
gi|84384629|gb|EAQ00509.1| putative endonuclease III [Janibacter sp. HTCC2649]
Length = 263
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 3/227 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M + SY SP+ + +I+ ++P EL + L++A +LSAQ
Sbjct: 1 MGVPATTLSYAAESPVA---RTRRARKIYRALVDRYPYAHAELDFETPLQLLLATVLSAQ 57
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VNK T LF T + + A ++++ ++ G +R K+ ++I+L L++ F
Sbjct: 58 TTDVTVNKVTPELFRRWPTAEALAAADREEMEAVLKPTGFFRAKTNSVITLGQALVDRFG 117
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P L+ L LPG+GRK ANV+L AF +P I VDTH R+ R G P KVE
Sbjct: 118 GEVPPRLKDLVTLPGVGRKTANVVLGNAFEVPGITVDTHFGRLVRRFGWTEETDPVKVEH 177
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ + P K + L+ HGR C AR+P C +C +S C +
Sbjct: 178 AIGALFPRKDWVMLSHVLIFHGRRTCHARRPACGACPVSQWCPSYGE 224
>gi|307545320|ref|YP_003897799.1| endonuclease III [Halomonas elongata DSM 2581]
gi|307217344|emb|CBV42614.1| endonuclease III [Halomonas elongata DSM 2581]
Length = 211
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF P P EL + F L+ AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNAQKRHEIFVRLREHNPEPTTELNWDTPFELLTAVLLSAQATDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +L +G L+ +I+TIG+Y K+EN++ IL ++ ++P++ L LPG+GRK
Sbjct: 61 PADILELGLDGLKEHIKTIGLYNTKAENLMKTCRILEDKHGGEVPRSRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR+SNR GLA GK N+VEQ LLR +P + +AH+WL+
Sbjct: 121 TANVILNTAFGEPTIAVDTHIFRVSNRTGLAKGKNVNEVEQKLLRYVPKDFRKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C SC+I +LC+
Sbjct: 181 LHGRYTCVARKPRCGSCVIEDLCEY 205
>gi|145299430|ref|YP_001142271.1| endonuclease III [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852202|gb|ABO90523.1| endonuclease III [Aeromonas salmonicida subsp. salmonicida A449]
Length = 213
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNNQKRRQILERLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G L+ YI+TIG++ K+EN+I IL+ ++P+ E L LPG+GRK
Sbjct: 61 PAAMLALGVDGLKQYIKTIGLFNTKAENVIKTCAILLERHGGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAVGKNVDQVEEKLLKVVPAEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEYKEK 208
>gi|116253944|ref|YP_769782.1| endonuclease III [Rhizobium leguminosarum bv. viciae 3841]
gi|115258592|emb|CAK09696.1| putative endonuclease III [Rhizobium leguminosarum bv. viciae 3841]
Length = 268
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 127/232 (54%), Positives = 179/232 (77%), Gaps = 7/232 (3%)
Query: 3 SSKKSDS----YQGNSPLGCLYTP---KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAV 55
S+ K+ P + T E EEIF FS++ P P+GEL + N FTL+VAV
Sbjct: 16 SATKTPQDANVIARRKPAAAVRTAYSLAEREEIFRRFSVQRPEPRGELEHTNPFTLVVAV 75
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
LSAQ+TDV VNKAT+ LF++ADTP+KML +GE++L+++IRTIG+YR K++N+I+LS +L
Sbjct: 76 ALSAQATDVGVNKATRALFKVADTPEKMLDLGEERLRDHIRTIGLYRNKAKNVIALSQML 135
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+++F K+P+T + L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPGKTP
Sbjct: 136 VDQFGGKVPETRDELVRLPGVGRKTANVVLSMAFGRATMAVDTHIFRIANRIRLAPGKTP 195
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++VE L+++IP + Y+AH+WL+LHGRY+CKAR+P+C+ CII++LCK ++
Sbjct: 196 DEVEVRLMKVIPNHYLYHAHHWLILHGRYICKARRPECERCIIADLCKSPEK 247
>gi|220935796|ref|YP_002514695.1| endonuclease III [Thioalkalivibrio sp. HL-EbGR7]
gi|219997106|gb|ACL73708.1| endonuclease III [Thioalkalivibrio sp. HL-EbGR7]
Length = 225
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +IF P P EL Y F L+VAV LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNAHKRRQIFERLRAANPHPTTELNYRTPFELLVAVTLSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L++YI+TIG++ K+ENII IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGVDGLKHYIKTIGLFNSKAENIIKACAILVEQHGGEVPRDRASLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR +APGKT VE+ LL++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTMAVDTHIFRVANRTRIAPGKTVLAVEKKLLKVIPAEFLKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR P+C C+I++LC+ +
Sbjct: 181 LHGRYTCTARSPKCPECLIADLCEYKDK 208
>gi|260769058|ref|ZP_05877992.1| A/G-specific adenine glycosylase [Vibrio furnissii CIP 102972]
gi|260617088|gb|EEX42273.1| A/G-specific adenine glycosylase [Vibrio furnissii CIP 102972]
gi|315180799|gb|ADT87713.1| endonuclease III [Vibrio furnissii NCTC 11218]
Length = 213
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNSKRV-EILQRLRENNPHPQTELNWNTPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M +G ++ YI+TIG++ K+EN+I IL+++ ++P+ E L LPG+GR
Sbjct: 60 TPQAMWDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDQHQGEVPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEAKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|222149822|ref|YP_002550779.1| endonuclease III [Agrobacterium vitis S4]
gi|221736804|gb|ACM37767.1| endonuclease III [Agrobacterium vitis S4]
Length = 254
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 127/225 (56%), Positives = 177/225 (78%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S + + Y+ ELEEIF FS++ P PKGEL +VN FTL+VAV LSAQ+T
Sbjct: 14 SPSQPKPAGRKVAVRSAYSKAELEEIFRRFSVQRPEPKGELEHVNPFTLVVAVALSAQAT 73
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VNKAT+ LF +ADTP+KMLA+GE+K+++YI+TIG++R K++N+I+LS LI++F ++
Sbjct: 74 DAGVNKATRALFAVADTPEKMLALGEEKVRDYIKTIGLFRNKAKNVIALSQKLIDDFGSE 133
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+T E L LPG+GRK ANV++SMAFGIPT+ VDTHI RI NRI LAPGKTP+++E+ L
Sbjct: 134 VPKTREELVTLPGVGRKTANVVMSMAFGIPTMAVDTHILRIGNRIRLAPGKTPDEIEEIL 193
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+RIIP + ++AH+WL+LHGRY CKARKP+C+ C+I++LCK ++
Sbjct: 194 MRIIPKHYLFHAHHWLILHGRYCCKARKPECERCVIADLCKSPEK 238
>gi|253999506|ref|YP_003051569.1| endonuclease III [Methylovorus sp. SIP3-4]
gi|253986185|gb|ACT51042.1| endonuclease III [Methylovorus sp. SIP3-4]
Length = 210
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF S P PK EL + + F L++AV+LSAQ+TD VN AT LF +A+T
Sbjct: 1 MNAEKRHEIFRRLSEAIPEPKTELTHTSTFELLIAVILSAQATDKGVNIATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ++ +G + L+ YI+TIG+YR K++N+++ +L+ ++++++P+T E L LPG+GRK
Sbjct: 61 PQAIVDLGLEGLEGYIKTIGLYRSKAKNVLATCRMLVEQYNSEVPRTREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG TI VDTHIFR+ NRIGLAPGKTP VE+ L++ +P ++ +AH+ L+
Sbjct: 121 TANVILNTAFGEATIAVDTHIFRLGNRIGLAPGKTPLDVEKKLIKTVPREYMQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C +C+I + C+ ++
Sbjct: 181 LHGRYVCVARKPKCAACVIYDQCEYKEK 208
>gi|301156221|emb|CBW15692.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus parainfluenzae T3T1]
Length = 211
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y + F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLREQNPHPTTELEYNSPFELLIAVILSAQATDKGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG+Y K+ENII L+ + + ++P++ E L L G+GRK
Sbjct: 61 PQAILDLGLEGLKEYIKTIGLYNSKAENIIKTCRDLVEKHNGEVPESREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVCNRTNFAPGKDVVKVEEKLLKVVPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGACLIEDLCEYKEK 208
>gi|68250293|ref|YP_249405.1| endonuclease III [Haemophilus influenzae 86-028NP]
gi|68058492|gb|AAX88745.1| endonuclease III [Haemophilus influenzae 86-028NP]
gi|309972915|gb|ADO96116.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Haemophilus influenzae R2846]
Length = 211
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI + P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+
Sbjct: 1 MNKTKRI-EILTRLREQTPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L++YI+TIG++ K+ENII LI + + ++P+ E L L G+GR
Sbjct: 60 TPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK KVE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|163802828|ref|ZP_02196717.1| ribonuclease T [Vibrio sp. AND4]
gi|159173368|gb|EDP58191.1| ribonuclease T [Vibrio sp. AND4]
Length = 213
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKVKRI-EILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN I +L+ + + ++P+ L LPG+GR
Sbjct: 60 TPQDILNLGVDGLKKYIKTIGLFNSKAENTIKTCKLLLEKHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEEKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|37679370|ref|NP_933979.1| EndoIII-related endonuclease [Vibrio vulnificus YJ016]
gi|37198113|dbj|BAC93950.1| EndoIII-related endonuclease [Vibrio vulnificus YJ016]
Length = 213
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I PSP+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRIQILERLRENNPSPQTELNWNSPFELLIAVLLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + L+ YI+TIG++ K+EN I IL+ + + ++P+ + L LPG+GRK
Sbjct: 61 PQAMLDLGVEGLKEYIKTIGLFNSKAENTIKTCRILLEKHNGEVPEDRDALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR APGK ++VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAPGKNVDEVEQKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|290958569|ref|YP_003489751.1| endonuclease/N-glycosylase [Streptomyces scabiei 87.22]
gi|260648095|emb|CBG71203.1| putative endonuclease/N-glycosylase [Streptomyces scabiei 87.22]
Length = 369
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 111/205 (54%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + +P EL + N F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 120 RRARRINRELAEVYPYAHPELDFENSFQLVVATVLSAQTTDLRVNQTTPALFAKYPTPED 179
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ +R G +R K+++++ LS L+ +P LE L +LPG+GRK A
Sbjct: 180 LAAAVPEEVEEILRPCGFFRAKTKSVMGLSKALVENHGGDVPGRLEDLVKLPGVGRKTAF 239
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG P I VDTH R+ R P+K+E ++ + P + ++ HG
Sbjct: 240 VVLGNAFGRPGITVDTHFQRLVRRWRWTEATDPDKIEAAIGGLFPKSEWTMLSHHVIFHG 299
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ARKP C +C I+ LC +
Sbjct: 300 RRICHARKPACGACPIAPLCPAFGE 324
>gi|237653896|ref|YP_002890210.1| endonuclease III [Thauera sp. MZ1T]
gi|237625143|gb|ACR01833.1| endonuclease III [Thauera sp. MZ1T]
Length = 213
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 93/203 (45%), Positives = 139/203 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + E F P P+ EL Y + + L+VAV+LSAQ+TD +VN AT+ LF +A T
Sbjct: 4 MKREAIREFFRRLHEAEPHPQTELEYASPYQLLVAVVLSAQATDRSVNLATRKLFALAPT 63
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ M+++GE+ + I++IG++R K++N ++LS +L+ ++P E L LPG+GRK
Sbjct: 64 PEAMVSLGEEGIAECIKSIGLFRNKAKNTLALSRLLLERHGGEVPAVREALEALPGVGRK 123
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ F P + VDTHIFR++NR GLAPGK +VE++LLR +P + +AH+WL+
Sbjct: 124 TANVVLNTVFRQPAMAVDTHIFRLANRTGLAPGKDVLEVEKALLRRVPKDYLLDAHHWLI 183
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVC ARKP+C C + +LC
Sbjct: 184 LHGRYVCTARKPKCGECGVRDLC 206
>gi|212696106|ref|ZP_03304234.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325846564|ref|ZP_08169479.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676735|gb|EEB36342.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325481322|gb|EGC84363.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 221
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 134/211 (63%), Gaps = 1/211 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPS-PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K++ E+ +P+ K L + F L+VA +LSAQ TDV VNK T H+F+
Sbjct: 9 VILNKKQINEVIERLDNLYPNLEKSFLDFTTPFELLVATILSAQCTDVRVNKVTNHMFKY 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A+ P+ + K++++YI+T G+Y+ K++NI + S +LI EFD ++P ++ L +LPG+
Sbjct: 69 ANKPEDFSKMDIKEIEDYIKTCGLYKNKAKNIKNASIMLIREFDGEVPSNMKDLIKLPGV 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV++S AFGI I VDTH+ R+SNRIGLA K E+ L + +P + H+
Sbjct: 129 GRKTANVVMSNAFGIDAIAVDTHVQRVSNRIGLAHSKDVLNTEKDLRKNLPKEKWSKLHH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ HGR +CKAR P C+ C + +LC+ K+
Sbjct: 189 QIIAHGRKICKARNPLCEECDLRDLCEDYKE 219
>gi|15890527|ref|NP_356199.1| endonuclease III [Agrobacterium tumefaciens str. C58]
gi|15158768|gb|AAK88984.1| endonuclease III [Agrobacterium tumefaciens str. C58]
Length = 260
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 126/225 (56%), Positives = 178/225 (79%), Gaps = 2/225 (0%)
Query: 5 KKSDSYQGNSPLGC--LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
KKS Q P+ Y+ EL EIF FS++ P PKGEL + N FTL+VAV LSAQ+T
Sbjct: 14 KKSIPAQRRKPVRVKTAYSKDELTEIFRRFSIQRPEPKGELEHTNPFTLLVAVALSAQAT 73
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VN+AT+ LF++ADTP+KMLA+GE++L +I+TIG+YR K++N+I+LS +LI+ F +
Sbjct: 74 DVGVNRATRALFKVADTPEKMLALGEEQLIGHIKTIGLYRNKAKNVIALSQMLIDNFGGE 133
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+T E L LPG+GRK ANV++SMAFG+PT+ VDTH+FRI+NR+ LAPGKT ++VE L
Sbjct: 134 VPKTREELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCLAPGKTTDEVEDRL 193
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+RIIP ++ ++AH+WL+LHGRY CKARKP+C+ C+I+++CK ++
Sbjct: 194 VRIIPEQYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEK 238
>gi|116671918|ref|YP_832851.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Arthrobacter sp. FB24]
gi|116612027|gb|ABK04751.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24]
Length = 277
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 117/223 (52%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ K S L + I + +P EL + + F L+VA +LSAQ+T
Sbjct: 7 TPKPGSVIPRTSGESLLGLKRRARRINRALAELYPYAHAELDFRSPFELLVATVLSAQTT 66
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VN+ T LF + M +L+ ++ G +R K+ N+++L + L++E+D +
Sbjct: 67 DVVVNQVTPLLFARYPDARSMAEADPAELEVILKPTGFFRAKARNVMALCNRLVDEYDGE 126
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P L+ L LPG+GRK ANV+L AFGIP I VDTH R++ R+G P +VE +
Sbjct: 127 VPPRLQDLVTLPGVGRKTANVVLGNAFGIPGITVDTHFGRLARRLGWTESDDPVRVEADV 186
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P+ + +V HGR VC ARKP C +C ++ C
Sbjct: 187 AELFEPRDWTMLSHRVVFHGRRVCHARKPACGACAVATWCPSY 229
>gi|241761272|ref|ZP_04759360.1| endonuclease III [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374179|gb|EER63676.1| endonuclease III [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 215
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 157/208 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP +EE + + P+P+ EL + N +TL+V+V+LSAQ+TDV+VNKAT+ LF+I DT
Sbjct: 1 MTPDSVEEFYRRLAKDNPNPRSELVFKNPYTLLVSVVLSAQATDVSVNKATEPLFKIVDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE +L++YIR+IG+Y K++NII+LSHIL+ ++ ++P + L LPG+GRK
Sbjct: 61 PQQMVNLGEDRLKDYIRSIGLYNNKAKNIIALSHILVEKYQGQVPADQKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+L++AF PTI VDTHIFR++NR GLAPGK VE++L + P K++ +AH+WL+
Sbjct: 121 TALVVLNVAFNRPTIAVDTHIFRVANRTGLAPGKDVRAVEKALEDVTPEKYRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+CKARKP+C C S+LC +K+
Sbjct: 181 LFGRYICKARKPECLRCFESDLCAAVKE 208
>gi|150398564|ref|YP_001329031.1| endonuclease III [Sinorhizobium medicae WSM419]
gi|150030079|gb|ABR62196.1| endonuclease III [Sinorhizobium medicae WSM419]
Length = 236
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 125/215 (58%), Positives = 174/215 (80%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
++ Y+ +E+EEIF FS++ P PKGEL +VN FTL+VAV LSAQ+TD VNKAT+
Sbjct: 2 SARQRSAYSTEEVEEIFRRFSVQRPEPKGELEHVNPFTLVVAVALSAQATDAGVNKATRA 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF +ADTP+KMLA+GE+++++YI+TIG+YR K++N+I+LS LI +F ++P+T E L
Sbjct: 62 LFAVADTPEKMLALGEERVRDYIKTIGLYRNKAKNVIALSRKLITDFGGEVPRTREELVT 121
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+LSMAFG TI VDTHIFRI++RI +APGKTP++VE LLR+IP Y
Sbjct: 122 LPGVGRKTANVVLSMAFGEATIAVDTHIFRIAHRIRIAPGKTPDEVEAHLLRVIPEHRLY 181
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRYVCKAR+P+C+ C+I+++CK ++
Sbjct: 182 HAHHWLILHGRYVCKARRPECERCVIADICKSPEK 216
>gi|110635893|ref|YP_676101.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Mesorhizobium sp. BNC1]
gi|110286877|gb|ABG64936.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Chelativorans sp. BNC1]
Length = 268
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 133/241 (55%), Positives = 176/241 (73%), Gaps = 14/241 (5%)
Query: 1 MVSSKKSDSYQG---NSPLGCLYTP-----------KELEEIFYLFSLKWPSPKGELYYV 46
M K + G SP + E+EEIF FS++ P PKGEL V
Sbjct: 1 MQKPKSPRAIAGTPVRSPAKPVRNKVSGKALTAYDAGEVEEIFRRFSVQRPEPKGELESV 60
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
N FTL+VAV+LSAQ+TDV VNKAT+ LF+IADTP+KMLA+GE+KL YIRTIG++R K++
Sbjct: 61 NAFTLLVAVVLSAQATDVGVNKATRPLFKIADTPEKMLALGEEKLGEYIRTIGLWRNKAK 120
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+I+L LI + ++P+ E LT+LPG+GRK ANV+L++AFG PT+ VDTHIFRISNR
Sbjct: 121 NVIALCEALIRDHGGQVPEDREALTKLPGVGRKTANVVLNVAFGHPTMAVDTHIFRISNR 180
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
I LAPGKTP +VEQ+LL++IP + +AH+WL+LHGRYVCKARKP C +C+I++LCK +
Sbjct: 181 ILLAPGKTPEEVEQALLKVIPQHYLLHAHHWLILHGRYVCKARKPDCPACVIADLCKAPE 240
Query: 227 Q 227
+
Sbjct: 241 K 241
>gi|148361192|ref|YP_001252399.1| endonuclease III [Legionella pneumophila str. Corby]
gi|148282965|gb|ABQ57053.1| endonuclease III [Legionella pneumophila str. Corby]
Length = 211
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 150/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +EIF F + P EL Y F L++AV+LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKQKSQEIFKRFQEQNPHRATELQYSTPFELLIAVMLSAQATDVSVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L++YI++IG+Y K++NI+ ILI++ + ++P E L LPG+GRK
Sbjct: 61 PQALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCAILIDQHEGQVPGQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NRIG+A G TP VE+ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNTPLAVERELLKKVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP C++CII +LC+ +
Sbjct: 181 LHGRYVCTARKPHCKTCIIEDLCEYKDK 208
>gi|319786564|ref|YP_004146039.1| endonuclease III [Pseudoxanthomonas suwonensis 11-1]
gi|317465076|gb|ADV26808.1| endonuclease III [Pseudoxanthomonas suwonensis 11-1]
Length = 263
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/223 (48%), Positives = 145/223 (65%), Gaps = 6/223 (2%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ + + G E+ E+F P P EL Y F L+VAV LSAQ+
Sbjct: 37 VAKPRIRARAGR------LAKPEVHELFSRLRELNPRPTTELEYSTPFELLVAVALSAQA 90
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VNKAT+ LF +A+TP +LA+GE L+ YI TIG++ K+ N+I+ IL+ +
Sbjct: 91 TDVGVNKATRRLFPVANTPAAILALGEDGLKQYINTIGLFNAKAANVIATCRILLEKHGG 150
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+ E L LPG+GRK ANV+L+ AFG PTI VDTHIFR+SNR GLAPGK VE
Sbjct: 151 EVPREREALEALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVSNRTGLAPGKDVRAVEDE 210
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
LLR +P + +AH+WL+LHGRYVCKARKP+C C+I +LC+
Sbjct: 211 LLRTVPAEFMQDAHHWLILHGRYVCKARKPECPRCVIRDLCRF 253
>gi|56551602|ref|YP_162441.1| endonuclease III [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543176|gb|AAV89330.1| endonuclease III [Zymomonas mobilis subsp. mobilis ZM4]
Length = 215
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 157/208 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP +EE + + P+P+ EL + N +TL+V+V+LSAQ+TDV+VNKAT+ LF+I DT
Sbjct: 1 MTPDSVEEFYRRLAKDNPNPRSELVFKNPYTLLVSVVLSAQATDVSVNKATEPLFKIVDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE +L++YIR+IG+Y K++NII+LSHIL+ ++ ++P + L LPG+GRK
Sbjct: 61 PQQMVDLGEDRLKDYIRSIGLYNNKAKNIIALSHILVEKYQGQVPADQKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+L++AF PTI VDTHIFR++NR GLAPGK VE++L + P K++ +AH+WL+
Sbjct: 121 TALVVLNVAFNRPTIAVDTHIFRVANRTGLAPGKDVRAVEKALEDVTPEKYRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+CKARKP+C C S+LC +K+
Sbjct: 181 LFGRYICKARKPECLRCFESDLCAAVKE 208
>gi|295697115|ref|YP_003590353.1| endonuclease III [Bacillus tusciae DSM 2912]
gi|295412717|gb|ADG07209.1| endonuclease III [Bacillus tusciae DSM 2912]
Length = 233
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 127/203 (62%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++ I + +P K L + N F L+VA +LSAQ TD VN T LF T +
Sbjct: 5 VKRILEVLEQTYPGAKCALDHRNPFELLVATILSAQCTDERVNLVTGPLFAKFPTAEDFA 64
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++L+ +I++ G+Y+ KS+NI+S IL+ E+ ++P++ E L LPG+GRK A+V+
Sbjct: 65 RLSPEELEPHIQSCGLYKTKSKNIVSACRILVEEYGGQVPKSREALQALPGVGRKTASVV 124
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
LS AFG+P I VDTH+FR++NR+GLA TP + E+ L++ IP AH+WL+ HGR
Sbjct: 125 LSNAFGVPAIAVDTHVFRVANRLGLADATTPEETERQLMKRIPKAKWSAAHHWLIHHGRQ 184
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C AR P C C +S C+ ++
Sbjct: 185 ICSARSPGCDRCPLSRYCRFARE 207
>gi|56460900|ref|YP_156181.1| endonuclease III [Idiomarina loihiensis L2TR]
gi|56179910|gb|AAV82632.1| Endonuclease III [Idiomarina loihiensis L2TR]
Length = 211
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF A T
Sbjct: 1 MNKTKRYEILSRLRDNNPNPTTELEYDSPFQLLIAVLLSAQATDVGVNKATRKLFPAAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ MLA+G ++ YI+TIG++ K+EN IL+ E+ ++P+ L LPG+GRK
Sbjct: 61 AETMLALGVDGIKEYIKTIGLFNSKAENAYKTCKILVQEYGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR LAPGK +VE+ L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKLAPGKNVKEVEEKLIKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCVIEDLCEFKEK 208
>gi|254500247|ref|ZP_05112398.1| endonuclease III [Labrenzia alexandrii DFL-11]
gi|222436318|gb|EEE42997.1| endonuclease III [Labrenzia alexandrii DFL-11]
Length = 273
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 118/227 (51%), Positives = 167/227 (73%), Gaps = 2/227 (0%)
Query: 3 SSKKSDS--YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
+ KK+ S G YT E EIF F P P+GEL Y+N +TL+VAVLLSAQ
Sbjct: 22 ARKKAPSVDNPGKVLKRSRYTKAETYEIFRRFHADNPEPEGELDYINAYTLLVAVLLSAQ 81
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD+ VN+ATKHLF+IADTP+KM+ +GE K++ IRTIG+++ K++N+I +S LI +
Sbjct: 82 ATDIGVNRATKHLFQIADTPEKMVTLGEDKVREKIRTIGLFKTKAKNVILMSEQLIRDHG 141
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ E L +LPG+GRK ANV+L++ FG PTI VDTH+FR+ NRIG+APGKTP VE+
Sbjct: 142 GEVPEDREALEKLPGVGRKTANVVLNIFFGHPTIAVDTHLFRLGNRIGIAPGKTPLDVEK 201
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
S+ + +P + +AH+WL+LHGRY+CKARKP+C+ C+I +LCK ++
Sbjct: 202 SMEKAVPKEFSLHAHHWLILHGRYICKARKPECKRCVIYDLCKSPEK 248
>gi|209966040|ref|YP_002298955.1| endonuclease III, putative [Rhodospirillum centenum SW]
gi|209959506|gb|ACJ00143.1| endonuclease III, putative [Rhodospirillum centenum SW]
Length = 228
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 110/203 (54%), Positives = 148/203 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+EE+F S + P P+ EL Y N FTL+VAV+LSAQ+TD VN+AT+ LF +ADT
Sbjct: 1 MKKAWVEELFRRLSERDPEPRTELDYTNPFTLLVAVVLSAQATDAGVNRATRTLFAVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M+A+GE ++ +IRTIG+YR K+ N+ LS IL+ ++P+ E L LPG+GRK
Sbjct: 61 PAAMVALGEDGIREHIRTIGLYRTKAANVFRLSQILLETHGGEVPRRREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTHIFR++NR GLAPGKTP VEQ LL+++P + +AH+WL+
Sbjct: 121 TANVVLNVAFGEPTIAVDTHIFRVANRTGLAPGKTPEAVEQGLLKVVPGAWRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVCKAR+P C C + +LC
Sbjct: 181 LHGRYVCKARRPDCPLCPVRDLC 203
>gi|308049952|ref|YP_003913518.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Ferrimonas balearica DSM 9799]
gi|307632142|gb|ADN76444.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Ferrimonas balearica DSM 9799]
Length = 213
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P+ EL + N + L+VAV LSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNKDKRRLILERLRANNPKPETELEFSNPYELLVAVALSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + +++YI+TIG+Y K+EN+I + IL+ + ++P+ L +LPG+GRK
Sbjct: 61 PQAMLDLGAEGVKSYIKTIGLYNTKAENVIKAARILVEQHGGEVPEDRAALEKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK ++VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAPGKNVDEVEQKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCLARKPRCGSCLIEDLCEFKDK 208
>gi|255066663|ref|ZP_05318518.1| endonuclease III [Neisseria sicca ATCC 29256]
gi|255048991|gb|EET44455.1| endonuclease III [Neisseria sicca ATCC 29256]
Length = 210
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL++ + F L++AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQIRQEIFERFRAANPHPTTELHFNSPFELLIAVLLSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFVPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKA+KPQC CII++LC+ +
Sbjct: 181 LHGRYTCKAQKPQCGKCIINDLCEYGAK 208
>gi|220913907|ref|YP_002489216.1| endonuclease III [Arthrobacter chlorophenolicus A6]
gi|219860785|gb|ACL41127.1| endonuclease III [Arthrobacter chlorophenolicus A6]
Length = 291
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 112/212 (52%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
S L + I + K+P EL + N F L+VA +LSAQ+TDV VN T L
Sbjct: 32 SSESALALKRRARRINRALAEKYPYAHAELDFTNPFELLVATVLSAQTTDVTVNLVTPVL 91
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + M L+ ++ G +R KS N+++L+ L++E+D +P +E L L
Sbjct: 92 FGRYPDARAMAEADPAVLEEILKPTGFFRAKSRNLLALATRLVDEYDGVVPGRIEDLVTL 151
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK ANV+L AFGIP I VDTH R++ R P +VE + + P+
Sbjct: 152 PGVGRKTANVVLGNAFGIPGITVDTHFGRLARRFNWTQSDDPVQVEADVAELFEPRDWTM 211
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +V HGR VC +RKP C +C ++N C
Sbjct: 212 LSHRVVFHGRRVCHSRKPACGACPVANWCPSY 243
>gi|269965967|ref|ZP_06180059.1| Predicted EndoIII-related endonuclease [Vibrio alginolyticus 40B]
gi|269829363|gb|EEZ83605.1| Predicted EndoIII-related endonuclease [Vibrio alginolyticus 40B]
Length = 242
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K + EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +
Sbjct: 28 SAMNKIKRI-EILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPV 86
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A+TPQ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+
Sbjct: 87 ANTPQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGV 146
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VEQ LL+++P + + + H+
Sbjct: 147 GRKTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHH 206
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 207 WLILHGRYTCVARKPRCGSCIIEDLCEYKEK 237
>gi|163751791|ref|ZP_02159008.1| Putative endonuclease III [Shewanella benthica KT99]
gi|161328355|gb|EDP99515.1| Putative endonuclease III [Shewanella benthica KT99]
Length = 213
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + I + P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRQRILEILRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG+Y K+ N+I IL+ ++ ++P+ E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLKTYIKTIGLYNNKAVNVIKACGILVEKYQGQVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI +DTHIFR++NR A GK ++VEQ +L+++P + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAIDTHIFRVANRTKFAMGKNVDQVEQKMLKVVPSEFMVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|212635171|ref|YP_002311696.1| endonuclease III/Nth [Shewanella piezotolerans WP3]
gi|212556655|gb|ACJ29109.1| Endonuclease III/Nth [Shewanella piezotolerans WP3]
Length = 213
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P+P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A++
Sbjct: 1 MNADKRRLILERLRENNPTPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+G + L++YI+TIG+Y K+ N+I IL+ ++D ++P+ E L LPG+GRK
Sbjct: 61 AQSIAALGVEGLKSYIKTIGLYNNKAINVIKACEILVEKYDGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+SNR A GK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVSNRTKFAMGKNVVEVEKKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKDK 208
>gi|260752805|ref|YP_003225698.1| endonuclease III [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552168|gb|ACV75114.1| endonuclease III [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 215
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 157/208 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP +EE + + P+P+ EL + N +TL+V+V+LSAQ+TDV+VNKAT+ LF+I DT
Sbjct: 1 MTPDSVEEFYRRLAKDNPNPRSELVFKNPYTLLVSVVLSAQATDVSVNKATEPLFKIVDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE +L++YIR+IG+Y K++NII+LSHIL+ ++ K+P + L LPG+GRK
Sbjct: 61 PQQMVDLGEDRLKDYIRSIGLYNNKAKNIIALSHILVEKYQGKVPADQKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+L++AF PTI VDTHIFR++NR GLAPGK VE++L + P K++ +AH+WL+
Sbjct: 121 TALVVLNVAFNRPTIAVDTHIFRVANRTGLAPGKDVRAVEKALEDVTPEKYRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+CKARKP+C C S+LC +K+
Sbjct: 181 LFGRYICKARKPECLRCFESDLCAAVKE 208
>gi|294787990|ref|ZP_06753234.1| endonuclease III [Simonsiella muelleri ATCC 29453]
gi|294484283|gb|EFG31966.1| endonuclease III [Simonsiella muelleri ATCC 29453]
Length = 213
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 139/209 (66%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +E+F P P EL Y + F L++AVLLSAQ+TDV VNKAT LF
Sbjct: 1 MVIIMNKATRQEMFERLRTANPHPTTELNYSSPFELLIAVLLSAQATDVGVNKATAKLFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+A+TPQ ML +G + + Y R+IG+YR KS++II LI + ++PQ E L L G
Sbjct: 61 VANTPQTMLDLGLEGVMQYTRSIGLYRTKSKHIIETCQALITKHHGEVPQNREDLEALAG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+ AF P + VDTHIFR+SNR GLA GK +VE L++ IP + +AH
Sbjct: 121 VGRKTANVVLNTAFRQPVMAVDTHIFRVSNRTGLAKGKNVREVEDKLMQNIPKEFLMDAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRY CKA+KPQC++CII++LC
Sbjct: 181 HWLILHGRYTCKAQKPQCETCIINDLCDY 209
>gi|326798003|ref|YP_004315822.1| endonuclease III [Sphingobacterium sp. 21]
gi|326548767|gb|ADZ77152.1| endonuclease III [Sphingobacterium sp. 21]
Length = 221
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E FS P + EL+Y N F L+VAV+LSAQ TD +N+ T LFE
Sbjct: 1 MLKKDRFREFVAYFSSHNPDAQTELHYSNAFELLVAVILSAQCTDKRINQITPKLFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A +++ YIR++ K+++++ ++ +L+ +F+ IP + L +LPG+GR
Sbjct: 61 DAETLAAASVEEVFTYIRSVSYPNNKAKHLVGMAKMLLEKFEGTIPSDINDLQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P I VDTH+FR+SNRIGL KTP VE+ L+ +P AH+W
Sbjct: 121 KTANVIASVVYDAPAIAVDTHVFRVSNRIGLTNNAKTPLAVEKQLVHYLPKNTLAVAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+C AR+P+C C I+ LCK ++
Sbjct: 181 LILHGRYICVARRPKCDECPITYLCKYYEK 210
>gi|299144525|ref|ZP_07037604.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517613|gb|EFI41353.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 214
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 131/212 (61%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L T KE E++ + + +P EL + + F L+V+ +LSAQ TDV VN T+ +++
Sbjct: 1 MRKLLTKKEAEQVLDVLEICYPDAHCELEHNSPFELLVSTILSAQCTDVRVNSVTRDMYK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+TP + +G ++ I+ G YR K++NI+ S ++ EFD ++P+T+E L LPG
Sbjct: 61 KYNTPLDFIELGIFGIEEIIKPCGFYRNKAKNILMTSKKIVEEFDGQVPKTIEELMSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+ S FG+P I VDTH+FR++NRIG K + E++L + I AH
Sbjct: 121 VGKKTANVVASTCFGVPAIAVDTHVFRLANRIGFVDEKDVLETEKALQKKIEKNRWTRAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ HGR +CKAR P C+ C IS+ CK K+
Sbjct: 181 HLLIFHGRRICKARNPICEECKISSYCKYFKR 212
>gi|86147965|ref|ZP_01066269.1| endonuclease III [Vibrio sp. MED222]
gi|85834290|gb|EAQ52444.1| endonuclease III [Vibrio sp. MED222]
Length = 211
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNVKRV-EILERLRENNPNPETELNWNSSFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G L+ YI+TIG++ K+EN I +L++ + ++P+ L LPG+GR
Sbjct: 60 TPQAIFDLGVDGLKEYIKTIGLFNSKAENTIKTCRMLLDLHNGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VE LL++IP + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEAKLLKVIPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|27375800|ref|NP_767329.1| endonuclease III [Bradyrhizobium japonicum USDA 110]
gi|27348938|dbj|BAC45954.1| endonuclease III [Bradyrhizobium japonicum USDA 110]
Length = 260
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 116/213 (54%), Positives = 161/213 (75%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+TP E+ E+F F P PKGEL +VN FTL+VAV+LSAQ+TD VNKAT+ LF
Sbjct: 46 KAMKPWTPAEIREVFSRFRKANPEPKGELEHVNPFTLLVAVVLSAQATDAGVNKATRALF 105
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E+ADTPQKML +GE+ L+ YI+TIG+YR K++N+I+LS +++EF ++P+T + LP
Sbjct: 106 EVADTPQKMLDLGEESLREYIKTIGLYRTKAKNVIALSAKVLSEFGGEVPRTRAEIESLP 165
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G GRK ANV+L+MAFG T+ VDTH+FR+ NR GLAPGKTP +VE L ++IP + +A
Sbjct: 166 GAGRKTANVVLNMAFGEHTMAVDTHVFRVGNRTGLAPGKTPLEVELGLEKVIPAEFMLHA 225
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+WL+LHGRY C ARKP+C+ C+I++LC+ ++
Sbjct: 226 HHWLILHGRYTCLARKPRCEVCLINDLCRWPEK 258
>gi|34498748|ref|NP_902963.1| endonuclease III [Chromobacterium violaceum ATCC 12472]
gi|34104599|gb|AAQ60957.1| endonuclease III [Chromobacterium violaceum ATCC 12472]
Length = 210
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P P EL Y F L+++VLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLRDDNPHPTTELEYNTPFELLISVLLSAQATDVGVNKATRRLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+GE+ L YI+TIG+Y+ K+ N+I+ +L+ + ++PQT E L LPG+GRK
Sbjct: 61 PAAMLALGEEGLAEYIKTIGLYKTKARNVIATCRLLLEKHGGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR +APGK +VE L R +P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVSNRTRIAPGKDVREVEDKLERFVPAEFKLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVCKARKP+C C I++LC+
Sbjct: 181 LLGRYVCKARKPECHRCAIADLCEY 205
>gi|308178282|ref|YP_003917688.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
arilaitensis Re117]
gi|307745745|emb|CBT76717.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
arilaitensis Re117]
Length = 264
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + + LG + +I + +P EL + N F L+VA +LSAQ+TDV V
Sbjct: 2 AKKLKNETELGL---KRRARKINRELAQAYPYAVPELDFGNPFELLVATVLSAQTTDVRV 58
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T LF M +L+ IR G +R K+E+++ LS L++ FD ++P
Sbjct: 59 NAITPALFARFPDALAMSQAERSELEELIRPTGFFRAKTESLLGLSAALVDRFDGQVPNK 118
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
LE L +LPG+GRK ANV+L AFG+P I VDTH R++NR G P KVE ++ +
Sbjct: 119 LEELVKLPGVGRKTANVVLGNAFGVPGITVDTHFGRLANRFGWTDETDPVKVEHAVGELF 178
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +V HGR VC +RKP C +C I+ LC
Sbjct: 179 EKHDWTMLSHRVVFHGRRVCHSRKPACGACEIAKLCPSY 217
>gi|15805320|ref|NP_294012.1| endonuclease III [Deinococcus radiodurans R1]
gi|6457961|gb|AAF09870.1|AE001890_2 endonuclease III [Deinococcus radiodurans R1]
Length = 225
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 122/217 (56%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ SP ++ +P + EL + F L+VA +LSAQ+TDV+VN
Sbjct: 2 TRNSASPRLPAGARARAPQVLSALGRLYPDARTELVFNTPFELLVATVLSAQATDVSVNA 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF + ++ YIR+IG+YR K++N+ +L+ +L+ ++P +
Sbjct: 62 ATPALFAAYPDAHALSQATADDIEPYIRSIGLYRGKAKNLAALARLLVERHGGEVPNDFD 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
+ LPG GRK ANV+LS A+ P I VDTH+ R++ R+GL+ P+KVE L ++ P
Sbjct: 122 AVVALPGAGRKTANVVLSNAYDYPAIAVDTHVGRLARRLGLSVQTNPDKVEADLQKLFPR 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H+ L+LHGR VC ARKPQC SC +++ C ++
Sbjct: 182 DRWVFLHHALILHGRRVCHARKPQCPSCELASFCPKV 218
>gi|297539550|ref|YP_003675319.1| endonuclease III [Methylotenera sp. 301]
gi|297258897|gb|ADI30742.1| endonuclease III [Methylotenera sp. 301]
Length = 219
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF S+ P+P EL + + F L++AV+LSAQ+TD VN AT LF +A+T
Sbjct: 1 MNEQKRFEIFKRLSIAIPNPSTELKHNSTFELLIAVILSAQATDKGVNLATDKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G + L+ YI+TIG+Y K++N+++ +LI + D+++P T + L LPG+GRK
Sbjct: 61 PESILALGIEGLERYIKTIGLYHAKAKNVLATCQMLITQHDSQVPNTRKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTH+FR+ NRI LA GKT +VE L+ IP + +AH+ L+
Sbjct: 121 TANVILNTAFGEPTIAVDTHLFRLGNRIKLATGKTVLEVEMKYLKTIPKEFMQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C C I +LC+ +
Sbjct: 181 LHGRYVCTARKPKCGECCIQDLCEYGAK 208
>gi|294141112|ref|YP_003557090.1| endonuclease III [Shewanella violacea DSS12]
gi|293327581|dbj|BAJ02312.1| endonuclease III [Shewanella violacea DSS12]
Length = 213
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 93/208 (44%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + I + P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRQRILEILRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ +I+TIG+Y K+ N+I IL+ ++ ++P+ E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLKTFIKTIGLYNNKAINVIKACGILVEKYQGQVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI +DTHIFR++NR A GK ++VEQ +L+++P + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAIDTHIFRVANRTKFAMGKNVDQVEQKMLKVVPAEFMVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|312881856|ref|ZP_07741627.1| endonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370502|gb|EFP97983.1| endonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
Length = 213
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ A+T
Sbjct: 1 MNKDKRRQILERLRENNPKPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLYPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G + ++ YI+TIG++ K+EN+I IL+++ + ++P+ E L LPG+GRK
Sbjct: 61 PRSILDLGVEGVKEYIKTIGLFNSKAENVIKTCKILLDKHNGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR A GK + VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAIGKNVDLVEEKLLKVVPSEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|323948071|gb|EGB44063.1| endonuclease III [Escherichia coli H120]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIQTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|258627113|ref|ZP_05721909.1| Predicted EndoIII-related endonuclease [Vibrio mimicus VM603]
gi|261211951|ref|ZP_05926237.1| A/G-specific adenine glycosylase [Vibrio sp. RC341]
gi|262165243|ref|ZP_06032980.1| predicted EndoIII-related endonuclease [Vibrio mimicus VM223]
gi|262402650|ref|ZP_06079211.1| A/G-specific adenine glycosylase [Vibrio sp. RC586]
gi|258580631|gb|EEW05584.1| Predicted EndoIII-related endonuclease [Vibrio mimicus VM603]
gi|260838559|gb|EEX65210.1| A/G-specific adenine glycosylase [Vibrio sp. RC341]
gi|262024959|gb|EEY43627.1| predicted EndoIII-related endonuclease [Vibrio mimicus VM223]
gi|262351432|gb|EEZ00565.1| A/G-specific adenine glycosylase [Vibrio sp. RC586]
Length = 213
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPSEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|260881026|ref|ZP_05893288.1| endonuclease III [Mitsuokella multacida DSM 20544]
gi|260850209|gb|EEX70216.1| endonuclease III [Mitsuokella multacida DSM 20544]
Length = 239
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 132/207 (63%), Gaps = 1/207 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K++ E + + K EL + N F L++AV+LSAQ TD VN TK LF
Sbjct: 18 MRVTKKIRDEQLAILEETYRGAKPELIFRNPFELLIAVILSAQCTDKRVNVTTKRLFAKV 77
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+P+ ++A+G L+N IR G++R K++NI++ +L EF ++P E L RLPG+G
Sbjct: 78 KSPEDIVAMGLPTLENEIRDCGLFRNKAKNILAACQMLCTEFGGEVPDDFEALQRLPGVG 137
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+AF P I VDTH+FRI+NR+ LA G TP VEQ L++ IP + +AH+W
Sbjct: 138 RKTANVVMSVAFHHPAIAVDTHVFRIANRLQLATGSTPLAVEQGLMKNIPKEKWSDAHHW 197
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR +CKARKP C C ++ +C
Sbjct: 198 LIWHGRKICKARKPACDICPLAPVCPS 224
>gi|331673202|ref|ZP_08373970.1| endonuclease III [Escherichia coli TA280]
gi|331069400|gb|EGI40787.1| endonuclease III [Escherichia coli TA280]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRTALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|301026789|ref|ZP_07190193.1| endonuclease III [Escherichia coli MS 69-1]
gi|300395327|gb|EFJ78865.1| endonuclease III [Escherichia coli MS 69-1]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PTAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|330446489|ref|ZP_08310141.1| endonuclease III [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490680|dbj|GAA04638.1| endonuclease III [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I + P P+ EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNQKRVQ-ILERLRAENPHPETELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G ++ YI+TIG++ K+EN+I IL+++ + +IP+ E L LPG+GR
Sbjct: 60 TPQAIYDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDKHNGEIPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK ++VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAMGKNVDQVEEKLLKVVPKEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|294649834|ref|ZP_06727236.1| DNA-(apurinic or apyrimidinic site) lyase [Acinetobacter
haemolyticus ATCC 19194]
gi|292824317|gb|EFF83118.1| DNA-(apurinic or apyrimidinic site) lyase [Acinetobacter
haemolyticus ATCC 19194]
Length = 235
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 150/213 (70%), Gaps = 1/213 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ P+ + T K+++ F + P+P+ EL Y + F L++AV+LSAQ+TDV+VNKA
Sbjct: 4 KESKMPVKNM-TKKQIQIFFERLREQRPNPQTELNYSSPFELLIAVMLSAQATDVSVNKA 62
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T L+ IA+T Q +L +G L+ YI+TIG+Y K+EN+I IL+N++ ++P+T +
Sbjct: 63 TDKLYPIANTAQAILNLGVDGLKEYIKTIGLYNAKAENVIKTCQILVNQYQGQVPETRKE 122
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP +
Sbjct: 123 LEALPGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEDRLIKVIPKE 182
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+AH+WL+LHGRY C ARKP+C CI+S++C
Sbjct: 183 FIIDAHHWLILHGRYCCIARKPKCGECIVSDVC 215
>gi|271962042|ref|YP_003336238.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum
DSM 43021]
gi|270505217|gb|ACZ83495.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum
DSM 43021]
Length = 241
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
G SPL + + ++ I + +P EL + N L+VA +LSAQ TD VN
Sbjct: 9 RAGESPLALVRRARRMDRI---LAETYPDAHCELDFRNPLELLVATILSAQCTDKRVNMV 65
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF T + ++++ IR+ G +R K+ +I+ ++ L + + ++P L+
Sbjct: 66 TPTLFAKYRTAEDYAGADRAEVEDIIRSTGFFRAKTNSIVGMAQALCDRYGGEVPGKLKD 125
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+GRK ANV+L AFG+P I VDTH R+ +R P K+E + +IP +
Sbjct: 126 LVTLPGVGRKTANVVLGNAFGVPGITVDTHFQRLVHRFHWTEETDPVKIEHIVAGLIPKR 185
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR +C AR P C C ++ LC
Sbjct: 186 DWTMMSHRLIWHGRRMCHARTPACGVCPLAALCPSY 221
>gi|117929200|ref|YP_873751.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Acidothermus cellulolyticus 11B]
gi|117649663|gb|ABK53765.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus
cellulolyticus 11B]
Length = 263
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 106/203 (52%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ I + +P EL + N L+VA +LSAQ TD VN T LF +
Sbjct: 38 RQARAIAKALAELYPDAHCELNFSNPLELLVATILSAQCTDQRVNMVTPALFAKYRSAAD 97
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
A +L+ I + G YR K+ II ++ L F ++P L+ L LPG+GRK AN
Sbjct: 98 YAAADRAELEKLIASTGFYRNKTAAIIGMAQALCERFGGEVPDRLDDLVTLPGVGRKTAN 157
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFGIP I VDTH+ R++ R G P VEQ + +IP + + ++ HG
Sbjct: 158 VVLGTAFGIPGITVDTHVLRLAKRFGWTTSNDPVVVEQEIAALIPREEWTALSHRMIWHG 217
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R VC ARKP C +C ++ LC
Sbjct: 218 RRVCHARKPACGACGLARLCPSY 240
>gi|33594447|ref|NP_882091.1| endonuclease III [Bordetella pertussis Tohama I]
gi|33597857|ref|NP_885500.1| endonuclease III [Bordetella parapertussis 12822]
gi|33602760|ref|NP_890320.1| endonuclease III [Bordetella bronchiseptica RB50]
gi|33564522|emb|CAE43837.1| endonuclease III [Bordetella pertussis Tohama I]
gi|33574286|emb|CAE38619.1| endonuclease III [Bordetella parapertussis]
gi|33577202|emb|CAE35759.1| endonuclease III [Bordetella bronchiseptica RB50]
gi|332383858|gb|AEE68705.1| endonuclease III [Bordetella pertussis CS]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 138/201 (68%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ EIF P P EL Y F L++AVLLSAQ+TD +VN AT+ F TPQ M
Sbjct: 5 KRREIFARLQAANPKPTTELEYETPFQLLIAVLLSAQATDKSVNLATRKFFPRHGTPQAM 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L +GE+ L YI+TIG+YR K++N I+ +L+ ++PQ+ E L LPG+GRK ANV
Sbjct: 65 LELGEEGLAEYIKTIGLYRTKAKNAIATCRLLLERHGGEVPQSREALEALPGVGRKTANV 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AFG TI VDTHIFR+SNR G+APGK +VE+ L +++P ++ +AH+WL+LHGR
Sbjct: 125 VLNTAFGEATIAVDTHIFRVSNRTGIAPGKNVLEVERKLEKVVPREYLLDAHHWLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
YVC ARKP+C C IS+LC+
Sbjct: 185 YVCVARKPKCPQCGISDLCEY 205
>gi|258622024|ref|ZP_05717053.1| Predicted EndoIII-related endonuclease [Vibrio mimicus VM573]
gi|262171984|ref|ZP_06039662.1| predicted EndoIII-related endonuclease [Vibrio mimicus MB-451]
gi|258585777|gb|EEW10497.1| Predicted EndoIII-related endonuclease [Vibrio mimicus VM573]
gi|261893060|gb|EEY39046.1| predicted EndoIII-related endonuclease [Vibrio mimicus MB-451]
Length = 213
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPSEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|226952540|ref|ZP_03823004.1| endonuclease III [Acinetobacter sp. ATCC 27244]
gi|226836722|gb|EEH69105.1| endonuclease III [Acinetobacter sp. ATCC 27244]
Length = 235
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 150/213 (70%), Gaps = 1/213 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ P+ + T K+++ F + P+P+ EL Y + F L++AV+LSAQ+TDV+VNKA
Sbjct: 4 KESKMPVKNM-TKKQIQIFFERLREQRPNPQTELNYSSPFELLIAVMLSAQATDVSVNKA 62
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T L+ IA+T Q +L +G L+ YI+TIG+Y K+EN+I IL+N++ ++P+T +
Sbjct: 63 TDKLYPIANTAQAILNLGVDGLKEYIKTIGLYNAKAENVIKTCQILVNQYQGQVPETRKE 122
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP +
Sbjct: 123 LEALPGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEARLIKVIPKE 182
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+AH+WL+LHGRY C ARKP+C CI+S++C
Sbjct: 183 FIIDAHHWLILHGRYCCIARKPKCGECIVSDVC 215
>gi|188587888|ref|YP_001922201.1| endonuclease III [Clostridium botulinum E3 str. Alaska E43]
gi|188498169|gb|ACD51305.1| endonuclease III [Clostridium botulinum E3 str. Alaska E43]
Length = 208
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 125/201 (62%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++I + +P K EL Y F L+VA +LSAQ+TD VN+ T+ LFE
Sbjct: 4 RTQKILDILKETYPDAKCELNYKTSFQLLVATILSAQTTDKKVNEVTQTLFEDYPDLDSF 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L I ++L+ I+ IG+YR KS+N+I + L F+ ++P T+EG+T L G GRK ANV
Sbjct: 64 LKITNEELEQRIKQIGLYRNKSKNLILMFRQLKENFNGEVPGTMEGITSLAGAGRKTANV 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AFG+P+I VDTH+FR+SNR+GLA + +VE L + +P H+ L+ HGR
Sbjct: 124 VLSNAFGVPSIAVDTHVFRVSNRLGLANSENVLEVEMQLQKELPKSEWSLTHHLLIFHGR 183
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C +R P+C+ C ++N+CK
Sbjct: 184 RCCTSRNPKCKECPLNNICKY 204
>gi|254230600|ref|ZP_04923960.1| endonuclease III [Vibrio sp. Ex25]
gi|151936873|gb|EDN55771.1| endonuclease III [Vibrio sp. Ex25]
Length = 242
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K + EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +
Sbjct: 28 SAMNKIKRI-EILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPV 86
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A+TP+ +L +G L+ YI+TIG++ K+EN I IL+ + + ++P+ L LPG+
Sbjct: 87 ANTPKSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGV 146
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VEQ LL+++P + + + H+
Sbjct: 147 GRKTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHH 206
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 207 WLILHGRYTCLARKPRCGSCIIEDLCEYKEK 237
>gi|91210846|ref|YP_540832.1| endonuclease III [Escherichia coli UTI89]
gi|91072420|gb|ABE07301.1| endonuclease III; specific for apurinic and/or apyrimidinic sites
[Escherichia coli UTI89]
gi|307626881|gb|ADN71185.1| endonuclease III [Escherichia coli UM146]
Length = 211
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVRTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|15641026|ref|NP_230657.1| endonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|153823434|ref|ZP_01976101.1| endonuclease III [Vibrio cholerae B33]
gi|227081185|ref|YP_002809736.1| endonuclease III [Vibrio cholerae M66-2]
gi|229505390|ref|ZP_04394900.1| endonuclease III [Vibrio cholerae BX 330286]
gi|229510940|ref|ZP_04400419.1| endonuclease III [Vibrio cholerae B33]
gi|229518061|ref|ZP_04407505.1| endonuclease III [Vibrio cholerae RC9]
gi|229608409|ref|YP_002879057.1| endonuclease III [Vibrio cholerae MJ-1236]
gi|254848141|ref|ZP_05237491.1| endonuclease III [Vibrio cholerae MO10]
gi|298498876|ref|ZP_07008683.1| endonuclease III [Vibrio cholerae MAK 757]
gi|9655475|gb|AAF94172.1| endonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|126519043|gb|EAZ76266.1| endonuclease III [Vibrio cholerae B33]
gi|227009073|gb|ACP05285.1| endonuclease III [Vibrio cholerae M66-2]
gi|229344776|gb|EEO09750.1| endonuclease III [Vibrio cholerae RC9]
gi|229350905|gb|EEO15846.1| endonuclease III [Vibrio cholerae B33]
gi|229357613|gb|EEO22530.1| endonuclease III [Vibrio cholerae BX 330286]
gi|229371064|gb|ACQ61487.1| endonuclease III [Vibrio cholerae MJ-1236]
gi|254843846|gb|EET22260.1| endonuclease III [Vibrio cholerae MO10]
gi|297543209|gb|EFH79259.1| endonuclease III [Vibrio cholerae MAK 757]
Length = 213
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRAHNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQTMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|153956018|ref|YP_001396783.1| hypothetical protein CKL_3410 [Clostridium kluyveri DSM 555]
gi|219856358|ref|YP_002473480.1| hypothetical protein CKR_3015 [Clostridium kluyveri NBRC 12016]
gi|146348876|gb|EDK35412.1| Hypothetical protein CKL_3410 [Clostridium kluyveri DSM 555]
gi|219570082|dbj|BAH08066.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 219
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 140/206 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ I S +P K L + + + L+V+ +LSAQ TDV VNK T+ L++ +T
Sbjct: 1 MNRENIDNILKTLSETYPQAKCALNFGSPYELLVSTILSAQCTDVRVNKVTRELYKEYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML++ E++L I++ G +R KS++I+ S +++ ++P+T+E LT+L G+GRK
Sbjct: 61 PEKMLSLTEEELGEKIKSCGFFRSKSKHILEASRVILESHKGEVPKTMEELTKLSGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFGIP I VDTH+FR+SNR+G+A G TP+KVE+ L++ IP + H++L+
Sbjct: 121 TANVVLSNAFGIPAIAVDTHVFRVSNRLGIAIGNTPDKVEKELMKNIPESMWSDTHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CK+RKP C++C + C+
Sbjct: 181 WHGRLICKSRKPDCENCPLVPWCQYF 206
>gi|145589680|ref|YP_001156277.1| endonuclease III [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048086|gb|ABP34713.1| endonuclease III [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 219
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 145/209 (69%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ F P+P+ EL Y + F L++AVLLSAQ+TDV+VNK T+ LF+IA+
Sbjct: 1 MMNLEKRRAFFEQLKANNPNPETELEYSSPFELLIAVLLSAQATDVSVNKGTRKLFKIAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +GE+ ++ YI+ IG++ K ++I +L+ + ++P+T E L LPG+GR
Sbjct: 61 TPQALLDLGEEGVRPYIQHIGLFNSKGKHIQETCRLLLEKHAGQVPETREELEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVIL+ AFG PT+ VDTHIFR+SNR GLAPGK KVE+ LL+ +P ++ +AH+WL
Sbjct: 121 KTANVILNTAFGQPTMAVDTHIFRVSNRTGLAPGKDVLKVEEQLLKRVPKEYLQDAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY CKAR P+C CI+ LC ++
Sbjct: 181 ILHGRYTCKARSPECAQCIVEPLCGFKQK 209
>gi|92114244|ref|YP_574172.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Chromohalobacter salexigens DSM 3043]
gi|91797334|gb|ABE59473.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Chromohalobacter salexigens DSM 3043]
Length = 212
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF P+P EL++ F L+ AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNAQKRHEIFSRLRDHNPTPTTELHWQTPFELLTAVLLSAQATDVGVNKATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++ I+TIG+Y K++N++ H+L+ ++P T E L LPG+GRK
Sbjct: 61 PQGILDLGLEGLKDKIKTIGLYNSKADNLMKTCHLLLERHGGEVPNTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PT+ VDTHIFR++NR +APGK +VEQ L+R +P + ++AH+WL+
Sbjct: 121 TANVILNTAFGQPTMAVDTHIFRVANRTRIAPGKNVLEVEQKLMRHVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGSCVIEDLCEYKDK 208
>gi|52424971|ref|YP_088108.1| Nth protein [Mannheimia succiniciproducens MBEL55E]
gi|52307023|gb|AAU37523.1| Nth protein [Mannheimia succiniciproducens MBEL55E]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF IA+T
Sbjct: 1 MNKQTRIEILTRLRDNNPQPTTELTYNSPFELLIAVILSAQATDKGVNKATERLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G + L+ YI+TIG+Y K+ENII LI + +++P+ L L G+GRK
Sbjct: 61 PEAILALGVEGLKEYIKTIGLYNAKAENIIKTCRDLIEKHQSQVPEDRAALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ L +++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLNKVVPNEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY C ARKP+C SCII +LC+ +
Sbjct: 181 LLGRYTCIARKPRCGSCIIEDLCEYKDK 208
>gi|153217627|ref|ZP_01951308.1| endonuclease III [Vibrio cholerae 1587]
gi|153829540|ref|ZP_01982207.1| endonuclease III [Vibrio cholerae 623-39]
gi|229523198|ref|ZP_04412605.1| endonuclease III [Vibrio cholerae TM 11079-80]
gi|229529895|ref|ZP_04419285.1| endonuclease III [Vibrio cholerae 12129(1)]
gi|254291766|ref|ZP_04962552.1| endonuclease III [Vibrio cholerae AM-19226]
gi|124113428|gb|EAY32248.1| endonuclease III [Vibrio cholerae 1587]
gi|148875000|gb|EDL73135.1| endonuclease III [Vibrio cholerae 623-39]
gi|150422359|gb|EDN14320.1| endonuclease III [Vibrio cholerae AM-19226]
gi|229333669|gb|EEN99155.1| endonuclease III [Vibrio cholerae 12129(1)]
gi|229339561|gb|EEO04576.1| endonuclease III [Vibrio cholerae TM 11079-80]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQTMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|300857069|ref|YP_003782053.1| endonuclease III [Clostridium ljungdahlii DSM 13528]
gi|300437184|gb|ADK16951.1| endonuclease III [Clostridium ljungdahlii DSM 13528]
Length = 214
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 140/206 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ I + +P K L + + + L+V+ +LSAQ TDV VNK T L++ +T
Sbjct: 1 MDKQNIDNILKVLKETYPEAKCALNFGSPYELLVSTMLSAQCTDVRVNKVTSELYKQYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM+++ E++L I++ G +R KS+NI++ S L+ ++D ++P T+E L LPG+GRK
Sbjct: 61 PEKMISLTEEELGEKIKSCGFFRNKSKNILATSRELVEKYDGEVPHTMEQLIELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V+LS AFG+P I VDTH+FR+SNR+G+A G TP+KVE L++ IP ++H++L+
Sbjct: 121 TADVVLSNAFGVPAIAVDTHVFRVSNRLGIAKGTTPHKVEMELMKNIPKSMWSDSHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CK+RKP C+ C ++ C+
Sbjct: 181 WHGRRICKSRKPDCEHCPLAPYCEYF 206
>gi|297578617|ref|ZP_06940545.1| endonuclease III [Vibrio cholerae RC385]
gi|297536211|gb|EFH75044.1| endonuclease III [Vibrio cholerae RC385]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL++IP + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVIPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|82777107|ref|YP_403456.1| endonuclease III [Shigella dysenteriae Sd197]
gi|309788400|ref|ZP_07683004.1| endonuclease III [Shigella dysenteriae 1617]
gi|81241255|gb|ABB61965.1| endonuclease III [Shigella dysenteriae Sd197]
gi|308923782|gb|EFP69285.1| endonuclease III [Shigella dysenteriae 1617]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L L G+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALSGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|152979399|ref|YP_001345028.1| endonuclease III [Actinobacillus succinogenes 130Z]
gi|150841122|gb|ABR75093.1| endonuclease III [Actinobacillus succinogenes 130Z]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI + P P EL Y + F L++AV+LSAQ+TD +VNKATK LF +A+T
Sbjct: 1 MNQQKRIEILTRLREEMPEPTTELVYNSPFELLIAVILSAQATDKSVNKATKKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +LA+G L+ YI+TIG+Y K+ENII LI +F+ KIP+ L L G+GRK
Sbjct: 61 PQAILALGVDSLKEYIKTIGLYNSKAENIIKTCRDLIEKFNGKIPENRTALESLAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR G APGK KVE+ L +++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGYPTIAVDTHIFRVANRTGFAPGKDVVKVEEKLNKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKGK 208
>gi|331683141|ref|ZP_08383742.1| endonuclease III [Escherichia coli H299]
gi|331079356|gb|EGI50553.1| endonuclease III [Escherichia coli H299]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PPAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|306813403|ref|ZP_07447593.1| endonuclease III [Escherichia coli NC101]
gi|305853148|gb|EFM53588.1| endonuclease III [Escherichia coli NC101]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|227538653|ref|ZP_03968702.1| DNA-(apurinic or apyrimidinic site) lyase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241572|gb|EEI91587.1| DNA-(apurinic or apyrimidinic site) lyase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ FS P + EL Y N + L++AV+LSAQ TD +N+ T LFE
Sbjct: 1 MLKKDRYRAFVEYFSTHNPDAQTELNYSNPYELLIAVILSAQCTDKRINQITPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++ +YIR++ K+++++ ++++LI +F+ ++P+ +E L +LPG+GR
Sbjct: 61 VVEALAVASVDEVFSYIRSVSYPNNKAKHLVGMANMLIEKFNGEVPEQIEDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR+SNR+GL TP VE+ L++ +P + AH+W
Sbjct: 121 KTANVISSVVYNKPAMAVDTHVFRVSNRLGLTSRATTPLAVEKQLVKFLPEETIAVAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGRY+C ARKP+C+ C I+ +CK +
Sbjct: 181 LILHGRYICLARKPKCEICPITYMCKYYE 209
>gi|289706178|ref|ZP_06502542.1| endonuclease III [Micrococcus luteus SK58]
gi|289557090|gb|EFD50417.1| endonuclease III [Micrococcus luteus SK58]
Length = 268
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 109/198 (55%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I + + +P EL + F L+VA +LSAQ+TDV VN AT LF M A
Sbjct: 24 INRILAETYPYAVAELDFETPFELLVATVLSAQTTDVRVNAATPALFARFPDAHAMAAAT 83
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E +LQ +R+ G YR K+ I+ LS L+ D ++P LE L LPG+GRK A V+L
Sbjct: 84 EPELQELVRSTGFYRNKASAILRLSQELVARHDGEVPARLEDLVALPGVGRKTAFVVLGN 143
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG P I VDTH+ R++ R+G P KVE ++ + P + + L+ HGR VC
Sbjct: 144 AFGQPGITVDTHVGRLARRLGFTDETDPVKVEHAVGALFPRRDWTMLSHRLIFHGRRVCH 203
Query: 208 ARKPQCQSCIISNLCKRI 225
AR+P C +C I+ C
Sbjct: 204 ARRPACGACPIARWCPSY 221
>gi|16129591|ref|NP_416150.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli str. K-12 substr. MG1655]
gi|26247880|ref|NP_753920.1| endonuclease III [Escherichia coli CFT073]
gi|74312040|ref|YP_310459.1| endonuclease III [Shigella sonnei Ss046]
gi|82543999|ref|YP_407946.1| endonuclease III [Shigella boydii Sb227]
gi|89108475|ref|AP_002255.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli str.
K-12 substr. W3110]
gi|110641756|ref|YP_669486.1| endonuclease III [Escherichia coli 536]
gi|117623819|ref|YP_852732.1| endonuclease III [Escherichia coli APEC O1]
gi|157157628|ref|YP_001462923.1| endonuclease III [Escherichia coli E24377A]
gi|157161095|ref|YP_001458413.1| endonuclease III [Escherichia coli HS]
gi|170020015|ref|YP_001724969.1| endonuclease III [Escherichia coli ATCC 8739]
gi|170081297|ref|YP_001730617.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli str. K-12 substr. DH10B]
gi|170681381|ref|YP_001743621.1| endonuclease III [Escherichia coli SMS-3-5]
gi|187732454|ref|YP_001880388.1| endonuclease III [Shigella boydii CDC 3083-94]
gi|188493188|ref|ZP_03000458.1| endonuclease III [Escherichia coli 53638]
gi|191165919|ref|ZP_03027756.1| endonuclease III [Escherichia coli B7A]
gi|191173408|ref|ZP_03034936.1| endonuclease III [Escherichia coli F11]
gi|193064975|ref|ZP_03046051.1| endonuclease III [Escherichia coli E22]
gi|194425889|ref|ZP_03058445.1| endonuclease III [Escherichia coli B171]
gi|194436505|ref|ZP_03068606.1| endonuclease III [Escherichia coli 101-1]
gi|209918946|ref|YP_002293030.1| endonuclease III [Escherichia coli SE11]
gi|215486810|ref|YP_002329241.1| endonuclease III [Escherichia coli O127:H6 str. E2348/69]
gi|218554201|ref|YP_002387114.1| endonuclease III [Escherichia coli IAI1]
gi|218558504|ref|YP_002391417.1| endonuclease III [Escherichia coli S88]
gi|218689580|ref|YP_002397792.1| endonuclease III [Escherichia coli ED1a]
gi|218695196|ref|YP_002402863.1| endonuclease III [Escherichia coli 55989]
gi|218699799|ref|YP_002407428.1| endonuclease III [Escherichia coli IAI39]
gi|227885951|ref|ZP_04003756.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972]
gi|237705576|ref|ZP_04536057.1| endonuclease III [Escherichia sp. 3_2_53FAA]
gi|238900849|ref|YP_002926645.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli BW2952]
gi|253773409|ref|YP_003036240.1| endonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254161695|ref|YP_003044803.1| endonuclease III [Escherichia coli B str. REL606]
gi|256018173|ref|ZP_05432038.1| endonuclease III [Shigella sp. D9]
gi|256022705|ref|ZP_05436570.1| endonuclease III [Escherichia sp. 4_1_40B]
gi|260843939|ref|YP_003221717.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O103:H2 str. 12009]
gi|291282765|ref|YP_003499583.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Escherichia coli O55:H7 str. CB9615]
gi|293409945|ref|ZP_06653521.1| endonuclease III [Escherichia coli B354]
gi|293446009|ref|ZP_06662431.1| endonuclease III [Escherichia coli B088]
gi|300819306|ref|ZP_07099505.1| endonuclease III [Escherichia coli MS 107-1]
gi|300821495|ref|ZP_07101642.1| endonuclease III [Escherichia coli MS 119-7]
gi|300917996|ref|ZP_07134621.1| endonuclease III [Escherichia coli MS 115-1]
gi|300924661|ref|ZP_07140611.1| endonuclease III [Escherichia coli MS 182-1]
gi|300930905|ref|ZP_07146271.1| endonuclease III [Escherichia coli MS 187-1]
gi|300939052|ref|ZP_07153746.1| endonuclease III [Escherichia coli MS 21-1]
gi|300951213|ref|ZP_07165069.1| endonuclease III [Escherichia coli MS 116-1]
gi|300958503|ref|ZP_07170639.1| endonuclease III [Escherichia coli MS 175-1]
gi|300987979|ref|ZP_07178477.1| endonuclease III [Escherichia coli MS 200-1]
gi|300995446|ref|ZP_07181098.1| endonuclease III [Escherichia coli MS 45-1]
gi|301027696|ref|ZP_07191010.1| endonuclease III [Escherichia coli MS 196-1]
gi|301051042|ref|ZP_07197884.1| endonuclease III [Escherichia coli MS 185-1]
gi|301326612|ref|ZP_07219947.1| endonuclease III [Escherichia coli MS 78-1]
gi|301647808|ref|ZP_07247595.1| endonuclease III [Escherichia coli MS 146-1]
gi|307138288|ref|ZP_07497644.1| endonuclease III [Escherichia coli H736]
gi|307310795|ref|ZP_07590441.1| endonuclease III [Escherichia coli W]
gi|309793398|ref|ZP_07687825.1| endonuclease III [Escherichia coli MS 145-7]
gi|312966603|ref|ZP_07780823.1| endonuclease III [Escherichia coli 2362-75]
gi|312969654|ref|ZP_07783837.1| endonuclease III [Escherichia coli 1827-70]
gi|331642226|ref|ZP_08343361.1| endonuclease III [Escherichia coli H736]
gi|331647122|ref|ZP_08348216.1| endonuclease III [Escherichia coli M605]
gi|331653029|ref|ZP_08354034.1| endonuclease III [Escherichia coli M718]
gi|331657604|ref|ZP_08358566.1| endonuclease III [Escherichia coli TA206]
gi|331668311|ref|ZP_08369159.1| endonuclease III [Escherichia coli TA271]
gi|331677499|ref|ZP_08378174.1| endonuclease III [Escherichia coli H591]
gi|332279221|ref|ZP_08391634.1| endonuclease III [Shigella sp. D9]
gi|81175286|sp|P0AB84|END3_ECOL6 RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|81175287|sp|P0AB83|END3_ECOLI RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|157834527|pdb|2ABK|A Chain A, Refinement Of The Native Structure Of Endonuclease Iii To
A Resolution Of 1.85 Angstrom
gi|26108283|gb|AAN80485.1|AE016761_60 Endonuclease III [Escherichia coli CFT073]
gi|146972|gb|AAA24227.1| endonuclease III [Escherichia coli]
gi|1742691|dbj|BAA15387.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli str.
K12 substr. W3110]
gi|1787920|gb|AAC74705.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli str. K-12 substr. MG1655]
gi|73855517|gb|AAZ88224.1| endonuclease III [Shigella sonnei Ss046]
gi|81245410|gb|ABB66118.1| endonuclease III [Shigella boydii Sb227]
gi|110343348|gb|ABG69585.1| endonuclease III [Escherichia coli 536]
gi|115512943|gb|ABJ01018.1| endonuclease III; specific for apurinic and/or apyrimidinic sites
[Escherichia coli APEC O1]
gi|157066775|gb|ABV06030.1| endonuclease III [Escherichia coli HS]
gi|157079658|gb|ABV19366.1| endonuclease III [Escherichia coli E24377A]
gi|169754943|gb|ACA77642.1| endonuclease III [Escherichia coli ATCC 8739]
gi|169889132|gb|ACB02839.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli str. K-12 substr. DH10B]
gi|170519099|gb|ACB17277.1| endonuclease III [Escherichia coli SMS-3-5]
gi|187429446|gb|ACD08720.1| endonuclease III [Shigella boydii CDC 3083-94]
gi|188488387|gb|EDU63490.1| endonuclease III [Escherichia coli 53638]
gi|190904050|gb|EDV63762.1| endonuclease III [Escherichia coli B7A]
gi|190906250|gb|EDV65861.1| endonuclease III [Escherichia coli F11]
gi|192927462|gb|EDV82080.1| endonuclease III [Escherichia coli E22]
gi|194415944|gb|EDX32210.1| endonuclease III [Escherichia coli B171]
gi|194424537|gb|EDX40523.1| endonuclease III [Escherichia coli 101-1]
gi|209769618|gb|ACI83121.1| endonuclease III [Escherichia coli]
gi|209769624|gb|ACI83124.1| endonuclease III [Escherichia coli]
gi|209912205|dbj|BAG77279.1| endonuclease III [Escherichia coli SE11]
gi|215264882|emb|CAS09268.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli O127:H6 str. E2348/69]
gi|218351928|emb|CAU97654.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli 55989]
gi|218360969|emb|CAQ98542.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli IAI1]
gi|218365273|emb|CAR02994.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli S88]
gi|218369785|emb|CAR17556.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli IAI39]
gi|218427144|emb|CAR08027.2| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli ED1a]
gi|222033392|emb|CAP76133.1| endonuclease III [Escherichia coli LF82]
gi|226900333|gb|EEH86592.1| endonuclease III [Escherichia sp. 3_2_53FAA]
gi|227837130|gb|EEJ47596.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972]
gi|238860816|gb|ACR62814.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli BW2952]
gi|242377364|emb|CAQ32110.1| endonuclease III; specific for apurinic and/or apyrimidinic sites
[Escherichia coli BL21(DE3)]
gi|253324453|gb|ACT29055.1| endonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973596|gb|ACT39267.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli B str. REL606]
gi|253977791|gb|ACT43461.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli BL21(DE3)]
gi|257759086|dbj|BAI30583.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O103:H2 str. 12009]
gi|260449243|gb|ACX39665.1| endonuclease III [Escherichia coli DH1]
gi|284921557|emb|CBG34629.1| endonuclease III [Escherichia coli 042]
gi|290762638|gb|ADD56599.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Escherichia coli O55:H7 str. CB9615]
gi|291322839|gb|EFE62267.1| endonuclease III [Escherichia coli B088]
gi|291470413|gb|EFF12897.1| endonuclease III [Escherichia coli B354]
gi|294489897|gb|ADE88653.1| endonuclease III [Escherichia coli IHE3034]
gi|299879189|gb|EFI87400.1| endonuclease III [Escherichia coli MS 196-1]
gi|300297294|gb|EFJ53679.1| endonuclease III [Escherichia coli MS 185-1]
gi|300305988|gb|EFJ60508.1| endonuclease III [Escherichia coli MS 200-1]
gi|300314834|gb|EFJ64618.1| endonuclease III [Escherichia coli MS 175-1]
gi|300406135|gb|EFJ89673.1| endonuclease III [Escherichia coli MS 45-1]
gi|300414807|gb|EFJ98117.1| endonuclease III [Escherichia coli MS 115-1]
gi|300419150|gb|EFK02461.1| endonuclease III [Escherichia coli MS 182-1]
gi|300449518|gb|EFK13138.1| endonuclease III [Escherichia coli MS 116-1]
gi|300456041|gb|EFK19534.1| endonuclease III [Escherichia coli MS 21-1]
gi|300461250|gb|EFK24743.1| endonuclease III [Escherichia coli MS 187-1]
gi|300525998|gb|EFK47067.1| endonuclease III [Escherichia coli MS 119-7]
gi|300528077|gb|EFK49139.1| endonuclease III [Escherichia coli MS 107-1]
gi|300846713|gb|EFK74473.1| endonuclease III [Escherichia coli MS 78-1]
gi|301074068|gb|EFK88874.1| endonuclease III [Escherichia coli MS 146-1]
gi|306908973|gb|EFN39469.1| endonuclease III [Escherichia coli W]
gi|307553656|gb|ADN46431.1| endonuclease III [Escherichia coli ABU 83972]
gi|308122985|gb|EFO60247.1| endonuclease III [Escherichia coli MS 145-7]
gi|309701859|emb|CBJ01171.1| endonuclease III [Escherichia coli ETEC H10407]
gi|310337939|gb|EFQ03028.1| endonuclease III [Escherichia coli 1827-70]
gi|312288713|gb|EFR16613.1| endonuclease III [Escherichia coli 2362-75]
gi|312946233|gb|ADR27060.1| endonuclease III [Escherichia coli O83:H1 str. NRG 857C]
gi|315060940|gb|ADT75267.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli W]
gi|315136274|dbj|BAJ43433.1| endonuclease III [Escherichia coli DH1]
gi|315286318|gb|EFU45754.1| endonuclease III [Escherichia coli MS 110-3]
gi|315290591|gb|EFU49965.1| endonuclease III [Escherichia coli MS 153-1]
gi|315299660|gb|EFU58902.1| endonuclease III [Escherichia coli MS 16-3]
gi|315618819|gb|EFU99402.1| endonuclease III [Escherichia coli 3431]
gi|320174161|gb|EFW49326.1| Endonuclease III [Shigella dysenteriae CDC 74-1112]
gi|320186305|gb|EFW61041.1| Endonuclease III [Shigella flexneri CDC 796-83]
gi|320195469|gb|EFW70094.1| Endonuclease III [Escherichia coli WV_060327]
gi|320197816|gb|EFW72424.1| Endonuclease III [Escherichia coli EC4100B]
gi|320641987|gb|EFX11351.1| endonuclease III [Escherichia coli O157:H7 str. G5101]
gi|320647304|gb|EFX16112.1| endonuclease III [Escherichia coli O157:H- str. 493-89]
gi|320652598|gb|EFX20867.1| endonuclease III [Escherichia coli O157:H- str. H 2687]
gi|320652984|gb|EFX21180.1| endonuclease III [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320658667|gb|EFX26344.1| endonuclease III [Escherichia coli O55:H7 str. USDA 5905]
gi|320668657|gb|EFX35462.1| endonuclease III [Escherichia coli O157:H7 str. LSU-61]
gi|323163518|gb|EFZ49344.1| endonuclease III [Escherichia coli E128010]
gi|323169191|gb|EFZ54867.1| endonuclease III [Shigella sonnei 53G]
gi|323169940|gb|EFZ55596.1| endonuclease III [Escherichia coli LT-68]
gi|323187058|gb|EFZ72374.1| endonuclease III [Escherichia coli RN587/1]
gi|323378489|gb|ADX50757.1| endonuclease III [Escherichia coli KO11]
gi|323937239|gb|EGB33518.1| endonuclease III [Escherichia coli E1520]
gi|323940698|gb|EGB36889.1| endonuclease III [Escherichia coli E482]
gi|323952144|gb|EGB48017.1| endonuclease III [Escherichia coli H252]
gi|323956644|gb|EGB52381.1| endonuclease III [Escherichia coli H263]
gi|323962126|gb|EGB57721.1| endonuclease III [Escherichia coli H489]
gi|323968401|gb|EGB63807.1| endonuclease III [Escherichia coli M863]
gi|323973987|gb|EGB69159.1| endonuclease III [Escherichia coli TA007]
gi|323978227|gb|EGB73313.1| endonuclease III [Escherichia coli TW10509]
gi|324006980|gb|EGB76199.1| endonuclease III [Escherichia coli MS 57-2]
gi|324011393|gb|EGB80612.1| endonuclease III [Escherichia coli MS 60-1]
gi|324016568|gb|EGB85787.1| endonuclease III [Escherichia coli MS 117-3]
gi|324119120|gb|EGC13008.1| endonuclease III [Escherichia coli E1167]
gi|327252749|gb|EGE64403.1| endonuclease III [Escherichia coli STEC_7v]
gi|330911440|gb|EGH39950.1| endonuclease 3 [Escherichia coli AA86]
gi|331039024|gb|EGI11244.1| endonuclease III [Escherichia coli H736]
gi|331043905|gb|EGI16041.1| endonuclease III [Escherichia coli M605]
gi|331049127|gb|EGI21199.1| endonuclease III [Escherichia coli M718]
gi|331055852|gb|EGI27861.1| endonuclease III [Escherichia coli TA206]
gi|331063505|gb|EGI35416.1| endonuclease III [Escherichia coli TA271]
gi|331073959|gb|EGI45279.1| endonuclease III [Escherichia coli H591]
gi|332096043|gb|EGJ01048.1| endonuclease III [Shigella boydii 3594-74]
gi|332101573|gb|EGJ04919.1| endonuclease III [Shigella sp. D9]
gi|332343351|gb|AEE56685.1| endonuclease III [Escherichia coli UMNK88]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|153824901|ref|ZP_01977568.1| endonuclease III [Vibrio cholerae MZO-2]
gi|262189587|ref|ZP_06047988.1| A/G-specific adenine glycosylase [Vibrio cholerae CT 5369-93]
gi|149741413|gb|EDM55443.1| endonuclease III [Vibrio cholerae MZO-2]
gi|262034529|gb|EEY52868.1| A/G-specific adenine glycosylase [Vibrio cholerae CT 5369-93]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRAHNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|149190369|ref|ZP_01868641.1| endonuclease III [Vibrio shilonii AK1]
gi|148835748|gb|EDL52713.1| endonuclease III [Vibrio shilonii AK1]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNNIKRREILERLRENNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ ML +G ++ YI+TIG++ K+EN+I IL+++ ++++P+ E L LPG+GRK
Sbjct: 61 PEAMLELGVDGVKEYIKTIGLFNSKAENVIKTCQILVDQHNSEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR A GKT + VE LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEHKLLKVVPKEFKLDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCIIEDLCEFKEK 208
>gi|313902106|ref|ZP_07835517.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Thermaerobacter subterraneus DSM 13965]
gi|313467624|gb|EFR63127.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Thermaerobacter subterraneus DSM 13965]
Length = 258
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 125/203 (61%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ I + +P L + F L+VA +LSAQ+TD VN+ T LF TP+ M
Sbjct: 22 RIARIRATLARMYPQATTALNWSTPFELLVATILSAQTTDAAVNQVTPALFARCPTPEAM 81
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L + E +L IRTIG++R K+ N+++ IL+ ++P+T E L +LPG+GRK ANV
Sbjct: 82 LELSEDELGAMIRTIGLWRNKARNLLAACRILVERHGGQVPRTREELMQLPGVGRKTANV 141
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AFGIP I VDTH+FR++ R+GLA G TP +VEQ L+ P AH+WL+ HGR
Sbjct: 142 VLSNAFGIPAIAVDTHVFRVARRLGLATGTTPERVEQELMEKFPEAEWSRAHHWLIWHGR 201
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C AR P+CQ+C + C +
Sbjct: 202 RICHARNPRCQACALRPDCPEGR 224
>gi|163867394|ref|YP_001608588.1| endonuclease III [Bartonella tribocorum CIP 105476]
gi|161017035|emb|CAK00593.1| endonuclease III [Bartonella tribocorum CIP 105476]
Length = 253
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 118/208 (56%), Positives = 168/208 (80%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
Y E+ EIF FS++ P+PK +L Y+N FTL+VAV+LSAQ+TD++VNKATK LF +AD
Sbjct: 26 YNKDEIAEIFRRFSVQRPTPKSDLNYINTFTLLVAVVLSAQATDISVNKATKELFRLADQ 85
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM+A+GE+++ ++IR+IG++R K+ N+ +LS+ LI+++ ++P T E L LPG+GRK
Sbjct: 86 PEKMVALGEEEIAHHIRSIGLWRAKARNVYALSNCLIDQYGGQVPDTCEALMSLPGVGRK 145
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR+GLAPGKTP VE+ LL+IIP + +AH+WL+
Sbjct: 146 TANVVLNVAFGQPTLAVDTHIFRLSNRLGLAPGKTPEIVEKKLLKIIPVHYLRHAHHWLI 205
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C+ARKPQC CII++LCK +
Sbjct: 206 LHGRYICQARKPQCTQCIIADLCKAASK 233
>gi|256420205|ref|YP_003120858.1| endonuclease III [Chitinophaga pinensis DSM 2588]
gi|256035113|gb|ACU58657.1| endonuclease III [Chitinophaga pinensis DSM 2588]
Length = 215
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 123/208 (59%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F + P+ + EL Y N + L+VAV+LSAQ TD VN T +F+
Sbjct: 1 MTKKERFAFVLKYFEEQAPNAETELIYDNPYQLLVAVILSAQCTDKRVNMTTPAIFQAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ L IR+I K++++I ++ +++ +F+ +IP T++ L +LPG+GR
Sbjct: 61 DVAALSHATFDDLFPLIRSISYPNNKTKHLIGMAQMVVEDFNGEIPATVDQLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ P + VDTH+FR+S RIGL TP + E+ LL+ IP + + AH+W
Sbjct: 121 KTANVITSVVHQQPNMAVDTHVFRVSARIGLTTNATTPLQTEKQLLKYIPTEKVHIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRY+C AR P+C+ C + +CK
Sbjct: 181 LILHGRYICVARSPKCEECGLRPVCKYY 208
>gi|313888481|ref|ZP_07822148.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845510|gb|EFR32904.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 131/212 (61%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + +E ++ + +P K EL + + F L+VA +LSAQ TDV VNK T+ +F+
Sbjct: 1 MKGILSHEEADKCLDVLEETYPDAKCELEHKSPFELLVATILSAQCTDVRVNKVTEEMFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ P+ + K L+ ++ G+YR K++NI + S++++ EF+ K+P+T++ L +LPG
Sbjct: 61 KYNKPEDFANMDIKTLEGLVKECGLYRNKAKNIKASSNVILEEFNGKVPETIKDLMKLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+ S FG+P I VDTH+FR+SNRIG K E++L I K AH
Sbjct: 121 VGKKTANVVASTCFGVPAIAVDTHVFRVSNRIGFVSENNVEKTEKALENKIDRKRWTKAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + HGR C AR P+CQ+C I + C+ ++
Sbjct: 181 HLFIFHGRRCCTARSPKCQACPIKDFCRYYEE 212
>gi|320529090|ref|ZP_08030182.1| endonuclease III [Selenomonas artemidis F0399]
gi|320138720|gb|EFW30610.1| endonuclease III [Selenomonas artemidis F0399]
Length = 209
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 134/207 (64%), Gaps = 1/207 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E + +P+ + L++ F L+VAV+LSAQ TD VN T LF A
Sbjct: 1 MRVTKAIKAEQLRILRETYPNAQPALHFATPFELLVAVILSAQCTDARVNIVTSRLFPRA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+TP+ + +G+ +L+ I G +R K+++II IL+ E+ ++P E L RLPG+G
Sbjct: 61 NTPEAIAGLGQSQLEEAIHDCGFFRMKAKHIIETCDILLREYGGEVPADFEALQRLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+AF IP I VDTH+FR+SNR+ LA GKTP +VE+ L ++IP +AH+W
Sbjct: 121 RKTANVVMSVAFHIPAIAVDTHVFRVSNRLHLAVGKTPLEVEKGLQKVIPRADWSDAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGR +CKARKP C C I+ +C
Sbjct: 181 LILHGRRLCKARKPLCGQCPIAPVCPS 207
>gi|300904477|ref|ZP_07122320.1| endonuclease III [Escherichia coli MS 84-1]
gi|301303145|ref|ZP_07209271.1| endonuclease III [Escherichia coli MS 124-1]
gi|300403587|gb|EFJ87125.1| endonuclease III [Escherichia coli MS 84-1]
gi|300841554|gb|EFK69314.1| endonuclease III [Escherichia coli MS 124-1]
gi|315257567|gb|EFU37535.1| endonuclease III [Escherichia coli MS 85-1]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M +G + ++ YI+TIG+Y K+ENII IL+ + ++P+ L LPG+GRK
Sbjct: 61 PAAMHELGVEGVKTYIKTIGLYNSKAENIIKTCRILLERHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|300770189|ref|ZP_07080068.1| DNA-(apurinic or apyrimidinic site) lyase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762665|gb|EFK59482.1| DNA-(apurinic or apyrimidinic site) lyase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 131/209 (62%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ FS P + EL Y N + L++AV+LSAQ TD +N+ T LFE
Sbjct: 1 MLKKDRYRAFVEYFSTHNPDAQTELNYSNPYELLIAVILSAQCTDKRINQITPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A ++ +YIR++ K+++++ ++++LI +F+ ++P+ +E L +LPG+GR
Sbjct: 61 VVEALAAASVDEVFSYIRSVSYPNNKAKHLVGMANMLIEKFNGEVPEQIEDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR+SNR+GL TP VE+ L++ +P + AH+W
Sbjct: 121 KTANVISSVVYNKPAMAVDTHVFRVSNRLGLTSRATTPLAVEKQLVKFLPEETIAVAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGRY+C ARKP+C+ C I+ +CK +
Sbjct: 181 LILHGRYICLARKPKCEICPITYMCKYYE 209
>gi|269129033|ref|YP_003302403.1| endonuclease III [Thermomonospora curvata DSM 43183]
gi|268313991|gb|ACZ00366.1| endonuclease III [Thermomonospora curvata DSM 43183]
Length = 246
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 1 MVSSKKS-DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
M++SK + P L + + + + +P EL + N L+VA +LSA
Sbjct: 1 MMTSKTGVKPRRVREPETRLALVRRARRMNRILAETYPDAHCELDFANPLELLVATILSA 60
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q TD VN T LF T A ++L+ IR G +R K++NII L L
Sbjct: 61 QCTDKRVNAVTPTLFARYRTAADYAAADREELEKIIRPTGFFRAKADNIIKLGQQLCERH 120
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P +E L L G+GRK ANV+L AF +P I VDTH R++ R G P KVE
Sbjct: 121 GGQVPDRMEDLVELAGVGRKTANVVLGNAFEVPGITVDTHFGRLARRFGWTSQTDPVKVE 180
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +IP K + ++ HGR +C AR+P C C ++ LC +
Sbjct: 181 REVAELIPRKEWTILSHRMIWHGRRICHARRPACGVCPLARLCPSFGE 228
>gi|218705134|ref|YP_002412653.1| endonuclease III [Escherichia coli UMN026]
gi|293405133|ref|ZP_06649125.1| endonuclease III [Escherichia coli FVEC1412]
gi|298380780|ref|ZP_06990379.1| endonuclease III [Escherichia coli FVEC1302]
gi|300901560|ref|ZP_07119629.1| endonuclease III [Escherichia coli MS 198-1]
gi|331663105|ref|ZP_08364015.1| endonuclease III [Escherichia coli TA143]
gi|218432231|emb|CAR13121.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli UMN026]
gi|291427341|gb|EFF00368.1| endonuclease III [Escherichia coli FVEC1412]
gi|298278222|gb|EFI19736.1| endonuclease III [Escherichia coli FVEC1302]
gi|300355027|gb|EFJ70897.1| endonuclease III [Escherichia coli MS 198-1]
gi|331058904|gb|EGI30881.1| endonuclease III [Escherichia coli TA143]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PTAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|239918301|ref|YP_002957859.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
gi|281415503|ref|ZP_06247245.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
gi|239839508|gb|ACS31305.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
Length = 268
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ ++ + + G + L + + ++ I + +P EL + F L+VA +LSAQ+
Sbjct: 1 METESTGTPTGETRLALVRRARRIDRI---LAETYPYAVAELDFETPFELLVATVLSAQT 57
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN AT LF M A E +LQ +R+ G YR K+ I+ LS L+ D
Sbjct: 58 TDVRVNAATPALFARFPDAHAMAAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDG 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L LPG+GRK A V+L AFG P I VDTH R++ R+G P KVE +
Sbjct: 118 EVPARLEDLVALPGVGRKTAFVVLGNAFGQPGITVDTHFGRLARRLGFTDETDPVKVEHA 177
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P + + L+ HGR VC AR+P C +C I+ C
Sbjct: 178 VGALFPRRDWTMLSHRLIFHGRRVCHARRPACGACPIARWCPSY 221
>gi|150015469|ref|YP_001307723.1| endonuclease III [Clostridium beijerinckii NCIMB 8052]
gi|149901934|gb|ABR32767.1| endonuclease III [Clostridium beijerinckii NCIMB 8052]
Length = 210
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 125/206 (60%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++I + +P K EL Y L++A +LSAQ+TD VN+ TK LF+
Sbjct: 2 KARTKKIVDILKETYPDAKCELNYGTPLQLLIATILSAQTTDKKVNEVTKDLFKDYPDLD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+L + ++L+ I+ IG+YR KS+N+I + + L +F+ ++P+T+E +T L G GRK A
Sbjct: 62 SLLTLTNEELEKRIKQIGLYRNKSKNLILMFNQLKEKFNGEVPKTMEEITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AF +P+I VDTH+FR+SNR+ LA + +VE+ L + +P K H+ L+ H
Sbjct: 122 NVVLSNAFNVPSIAVDTHVFRVSNRLKLADSENVLEVEKQLQKELPKKEWTLMHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GR C AR P+C C I +LC +
Sbjct: 182 GRRCCSARNPKCGECPIKDLCSYDNK 207
>gi|121729989|ref|ZP_01682406.1| endonuclease III [Vibrio cholerae V52]
gi|147674958|ref|YP_001216483.1| endonuclease III [Vibrio cholerae O395]
gi|229515397|ref|ZP_04404856.1| A/G-specific adenine glycosylase [Vibrio cholerae TMA 21]
gi|229525624|ref|ZP_04415029.1| endonuclease III [Vibrio cholerae bv. albensis VL426]
gi|121628275|gb|EAX60788.1| endonuclease III [Vibrio cholerae V52]
gi|146316841|gb|ABQ21380.1| endonuclease III [Vibrio cholerae O395]
gi|227012828|gb|ACP09038.1| endonuclease III [Vibrio cholerae O395]
gi|229339205|gb|EEO04222.1| endonuclease III [Vibrio cholerae bv. albensis VL426]
gi|229347166|gb|EEO12126.1| A/G-specific adenine glycosylase [Vibrio cholerae TMA 21]
gi|327483728|gb|AEA78135.1| Endonuclease III [Vibrio cholerae LMA3894-4]
Length = 213
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +G ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|193070281|ref|ZP_03051225.1| endonuclease III [Escherichia coli E110019]
gi|192956462|gb|EDV86921.1| endonuclease III [Escherichia coli E110019]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ +++ ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQYNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|260855458|ref|YP_003229349.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O26:H11 str. 11368]
gi|260868125|ref|YP_003234527.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O111:H- str. 11128]
gi|257754107|dbj|BAI25609.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O26:H11 str. 11368]
gi|257764481|dbj|BAI35976.1| DNA glycosylase and apyrimidinic (AP) lyase [Escherichia coli
O111:H- str. 11128]
gi|323152863|gb|EFZ39133.1| endonuclease III [Escherichia coli EPECa14]
gi|323180947|gb|EFZ66485.1| endonuclease III [Escherichia coli 1180]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + +P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGLVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|152979830|ref|YP_001352406.1| DNA-(apurinic or apyrimidinic site) lyase [Janthinobacterium sp.
Marseille]
gi|151279907|gb|ABR88317.1| DNA-(apurinic or apyrimidinic site) lyase [Janthinobacterium sp.
Marseille]
Length = 216
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF P P EL Y F L++AVLLSAQ+TDV+VNKAT+ L+ A T
Sbjct: 1 MNAEKRREIFNRLRAANPHPTTELEYQTPFQLLIAVLLSAQATDVSVNKATRKLYPHAGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K+ A+G L YI+TIG+YR K++N+I ILI E ++P+T E L LPG+GRK
Sbjct: 61 PKKIYALGVDGLIPYIQTIGLYRTKAKNVIETCRILIAEHGGEVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG TI VDTHIFR+SNR GLAPGK + VEQ L++ + P+ Q +AH+WL+
Sbjct: 121 TANVVMNTAFGEATIAVDTHIFRVSNRTGLAPGKNVDIVEQKLMKFVAPEFQQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR P+C +C+I++LC+ +
Sbjct: 181 LHGRYTCIARTPKCWNCVIADLCEYKSK 208
>gi|293414950|ref|ZP_06657593.1| endonuclease III [Escherichia coli B185]
gi|291432598|gb|EFF05577.1| endonuclease III [Escherichia coli B185]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR A GK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFALGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|281178705|dbj|BAI55035.1| endonuclease III [Escherichia coli SE15]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ A+G PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAYGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|241206427|ref|YP_002977523.1| endonuclease III [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860317|gb|ACS57984.1| endonuclease III [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 260
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 126/220 (57%), Positives = 173/220 (78%), Gaps = 3/220 (1%)
Query: 11 QGNSPLGCLYTP---KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
P + T E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TDV VN
Sbjct: 20 ARRKPAAAVRTAYSLTEREEIFRRFSVQRPQPRGELEHTNPFTLVVAVALSAQATDVGVN 79
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
KAT+ LF++ADTP+KML +GE++L++YIRTIG+YR K++N+I+LS +LI++F K+P+T
Sbjct: 80 KATRALFKVADTPEKMLDLGEERLRDYIRTIGLYRNKAKNVIALSQMLIDQFGGKVPETR 139
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
+ L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NR LAPGKTP++VE L+++IP
Sbjct: 140 DELVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRTRLAPGKTPDEVEARLMKVIP 199
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ Y+AH+WL+LHGRY CKAR+P+C+ CII++LCK ++
Sbjct: 200 SHYLYHAHHWLILHGRYTCKARRPECERCIIADLCKSPEK 239
>gi|255533437|ref|YP_003093809.1| endonuclease III [Pedobacter heparinus DSM 2366]
gi|255346421|gb|ACU05747.1| endonuclease III [Pedobacter heparinus DSM 2366]
Length = 225
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 134/208 (64%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + FS + P+ + EL+Y N F L+VAV+LSAQ TD +N+ T LF+
Sbjct: 1 MLKKERYRLFVAHFSARQPNAETELHYNNPFQLLVAVILSAQCTDKRINQVTPALFQRFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + +YIR++ K+++++ ++++L++EF+N++P ++ L ++PG+GR
Sbjct: 61 NAKALAETTPDIVFDYIRSVSYPNNKAKHLVGMANMLLHEFNNEVPSDVDQLQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI S+ + P + VDTH+FR++NRIGL GKTP VE+ L++ +P + AH+WL
Sbjct: 121 KTANVIASVIYNAPAMAVDTHVFRVANRIGLTNGKTPLAVEKDLVKNLPEHTIHVAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+LHGRYVC AR P+C C I++ CK +
Sbjct: 181 ILHGRYVCVARSPKCSICEIAHFCKYYQ 208
>gi|24113023|ref|NP_707533.1| endonuclease III [Shigella flexneri 2a str. 301]
gi|30063148|ref|NP_837319.1| endonuclease III [Shigella flexneri 2a str. 2457T]
gi|110805606|ref|YP_689126.1| endonuclease III [Shigella flexneri 5 str. 8401]
gi|24051987|gb|AAN43240.1| endonuclease III [Shigella flexneri 2a str. 301]
gi|30041397|gb|AAP17126.1| endonuclease III [Shigella flexneri 2a str. 2457T]
gi|110615154|gb|ABF03821.1| endonuclease III [Shigella flexneri 5 str. 8401]
gi|281601067|gb|ADA74051.1| Endonuclease III [Shigella flexneri 2002017]
gi|313648908|gb|EFS13345.1| endonuclease III [Shigella flexneri 2a str. 2457T]
gi|332757140|gb|EGJ87480.1| endonuclease III [Shigella flexneri 4343-70]
gi|332758102|gb|EGJ88427.1| endonuclease III [Shigella flexneri 2747-71]
gi|332758464|gb|EGJ88785.1| endonuclease III [Shigella flexneri K-671]
gi|332767034|gb|EGJ97233.1| endonuclease III [Shigella flexneri 2930-71]
gi|333003904|gb|EGK23439.1| endonuclease III [Shigella flexneri K-218]
gi|333005289|gb|EGK24809.1| endonuclease III [Shigella flexneri VA-6]
gi|333005866|gb|EGK25382.1| endonuclease III [Shigella flexneri K-272]
gi|333018042|gb|EGK37347.1| endonuclease III [Shigella flexneri K-304]
gi|333018891|gb|EGK38184.1| endonuclease III [Shigella flexneri K-227]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TD++VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDISVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|293396267|ref|ZP_06640545.1| endonuclease III [Serratia odorifera DSM 4582]
gi|291421056|gb|EFE94307.1| endonuclease III [Serratia odorifera DSM 4582]
Length = 213
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKQKRLEILTRLRDNNPHPTTELVFTTPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G ++ YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APG T +VE LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGNTVEQVEDKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|153800958|ref|ZP_01955544.1| endonuclease III [Vibrio cholerae MZO-3]
gi|124123549|gb|EAY42292.1| endonuclease III [Vibrio cholerae MZO-3]
Length = 213
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNAKRI-EILERLRANNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATDKLYAVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML + ++ YI+TIG++ K+EN+I IL+ + ++P+ E L LPG+GR
Sbjct: 60 TPQAMLDLDVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCVARKPRCGSCIIEDLCEFKDK 208
>gi|89092699|ref|ZP_01165652.1| Endonuclease III [Oceanospirillum sp. MED92]
gi|89083211|gb|EAR62430.1| Endonuclease III [Oceanospirillum sp. MED92]
Length = 211
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF + P P EL Y + F L++AV+LSAQ+TDV VNKAT+ L+ A+T
Sbjct: 1 MNKQKRHEIFSRWRADNPHPTTELEYDSPFELLIAVILSAQATDVGVNKATRKLYPKANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+EN+I +LI+E D+++P + E L LPG+GRK
Sbjct: 61 PEAIYALGVDGLKEYIKTIGLFNAKAENVIKTCKMLIDEHDSQVPDSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK N+VEQ LLR +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPAMAVDTHIFRVSNRTKIAPGKNVNEVEQKLLRFVPKEFLIDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPKCGSCMIEDLCEFKEK 208
>gi|194431988|ref|ZP_03064278.1| endonuclease III [Shigella dysenteriae 1012]
gi|194419896|gb|EDX35975.1| endonuclease III [Shigella dysenteriae 1012]
gi|320181348|gb|EFW56267.1| Endonuclease III [Shigella boydii ATCC 9905]
gi|332098249|gb|EGJ03222.1| endonuclease III [Shigella dysenteriae 155-74]
Length = 211
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPSEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|134094044|ref|YP_001099119.1| DNA glycosylase/apyrimidinic (AP) lyase [Herminiimonas
arsenicoxydans]
gi|133737947|emb|CAL60992.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Herminiimonas arsenicoxydans]
Length = 216
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF P P EL Y F L++AVLLSAQ+TDV+VNKAT+ L+ A T
Sbjct: 1 MNAEKRREIFNRLRAANPHPTTELEYQTPFQLLIAVLLSAQATDVSVNKATRKLYPHAGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K+ A+G + L YI+TIG+YR K++N+I ILI E ++P+T L LPG+GRK
Sbjct: 61 PRKIYALGVEGLMPYIQTIGLYRTKAKNVIETCRILIAEHGGEVPRTRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PTI VDTHIFR++NR G+APGK + VEQ L++ + P+ +++AH+WL+
Sbjct: 121 TANVVMNTAFGEPTIAVDTHIFRVANRTGIAPGKNVDIVEQKLMKFVAPEFRHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR P+C +CII++LC+ ++
Sbjct: 181 LHGRYTCIARTPKCWNCIIADLCEYKQK 208
>gi|15831596|ref|NP_310369.1| endonuclease III [Escherichia coli O157:H7 str. Sakai]
gi|168750553|ref|ZP_02775575.1| endonuclease III [Escherichia coli O157:H7 str. EC4113]
gi|168757451|ref|ZP_02782458.1| endonuclease III [Escherichia coli O157:H7 str. EC4401]
gi|168763663|ref|ZP_02788670.1| endonuclease III [Escherichia coli O157:H7 str. EC4501]
gi|168771175|ref|ZP_02796182.1| endonuclease III [Escherichia coli O157:H7 str. EC4486]
gi|168775863|ref|ZP_02800870.1| endonuclease III [Escherichia coli O157:H7 str. EC4196]
gi|168783456|ref|ZP_02808463.1| endonuclease III [Escherichia coli O157:H7 str. EC4076]
gi|168789470|ref|ZP_02814477.1| endonuclease III [Escherichia coli O157:H7 str. EC869]
gi|168800893|ref|ZP_02825900.1| endonuclease III [Escherichia coli O157:H7 str. EC508]
gi|195939022|ref|ZP_03084404.1| endonuclease III [Escherichia coli O157:H7 str. EC4024]
gi|208810702|ref|ZP_03252578.1| endonuclease III [Escherichia coli O157:H7 str. EC4206]
gi|208816785|ref|ZP_03257905.1| endonuclease III [Escherichia coli O157:H7 str. EC4045]
gi|208820506|ref|ZP_03260826.1| endonuclease III [Escherichia coli O157:H7 str. EC4042]
gi|209396011|ref|YP_002270703.1| endonuclease III [Escherichia coli O157:H7 str. EC4115]
gi|217328950|ref|ZP_03445031.1| endonuclease III [Escherichia coli O157:H7 str. TW14588]
gi|254793250|ref|YP_003078087.1| endonuclease III [Escherichia coli O157:H7 str. TW14359]
gi|261227922|ref|ZP_05942203.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli O157:H7 str. FRIK2000]
gi|261258344|ref|ZP_05950877.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli O157:H7 str. FRIK966]
gi|13361809|dbj|BAB35765.1| endonuclease III [Escherichia coli O157:H7 str. Sakai]
gi|187768694|gb|EDU32538.1| endonuclease III [Escherichia coli O157:H7 str. EC4196]
gi|188015244|gb|EDU53366.1| endonuclease III [Escherichia coli O157:H7 str. EC4113]
gi|188999218|gb|EDU68204.1| endonuclease III [Escherichia coli O157:H7 str. EC4076]
gi|189355540|gb|EDU73959.1| endonuclease III [Escherichia coli O157:H7 str. EC4401]
gi|189359993|gb|EDU78412.1| endonuclease III [Escherichia coli O157:H7 str. EC4486]
gi|189366197|gb|EDU84613.1| endonuclease III [Escherichia coli O157:H7 str. EC4501]
gi|189370952|gb|EDU89368.1| endonuclease III [Escherichia coli O157:H7 str. EC869]
gi|189376924|gb|EDU95340.1| endonuclease III [Escherichia coli O157:H7 str. EC508]
gi|208725218|gb|EDZ74925.1| endonuclease III [Escherichia coli O157:H7 str. EC4206]
gi|208731128|gb|EDZ79817.1| endonuclease III [Escherichia coli O157:H7 str. EC4045]
gi|208740629|gb|EDZ88311.1| endonuclease III [Escherichia coli O157:H7 str. EC4042]
gi|209157411|gb|ACI34844.1| endonuclease III [Escherichia coli O157:H7 str. EC4115]
gi|209769620|gb|ACI83122.1| endonuclease III [Escherichia coli]
gi|209769622|gb|ACI83123.1| endonuclease III [Escherichia coli]
gi|209769626|gb|ACI83125.1| endonuclease III [Escherichia coli]
gi|217318297|gb|EEC26724.1| endonuclease III [Escherichia coli O157:H7 str. TW14588]
gi|254592650|gb|ACT72011.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia coli O157:H7 str. TW14359]
gi|320188319|gb|EFW62981.1| Endonuclease III [Escherichia coli O157:H7 str. EC1212]
gi|326341999|gb|EGD65780.1| Endonuclease III [Escherichia coli O157:H7 str. 1044]
gi|326343550|gb|EGD67312.1| Endonuclease III [Escherichia coli O157:H7 str. 1125]
Length = 211
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + ++++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNSEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|309810814|ref|ZP_07704615.1| endonuclease III [Dermacoccus sp. Ellin185]
gi|308435120|gb|EFP58951.1| endonuclease III [Dermacoccus sp. Ellin185]
Length = 277
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 71/220 (32%), Positives = 111/220 (50%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
P ++ I+ ++P + EL + + L+VA ++SAQ+TDV VN
Sbjct: 2 PRRAAARPETHTALVRQARRIYRTLIAQYPYARAELDFESPLELLVATVISAQTTDVGVN 61
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
K T LF + +++ +R G YR K+ +I LS ++ FD ++P L
Sbjct: 62 KVTPVLFARYPDAAALAGADPAEMEEILRPTGFYRAKTRAVIKLSQDIVERFDGEVPGRL 121
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
+ L LPG+GRK ANV+L AFG+P I VDTH R++ R G + P KVE + + P
Sbjct: 122 DDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLARRFGWTTSEDPVKVEAEVGALFP 181
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
K + ++ HGR +C AR+P C C ++ C +
Sbjct: 182 KKDWTMLSHVVIFHGRRICHARRPACGVCPVAQWCPSFGE 221
>gi|260555959|ref|ZP_05828179.1| endonuclease III [Acinetobacter baumannii ATCC 19606]
gi|260410870|gb|EEX04168.1| endonuclease III [Acinetobacter baumannii ATCC 19606]
Length = 230
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELNYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSDRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 186 LHGRYCCIARKPKCSECVVADVC 208
>gi|28210111|ref|NP_781055.1| endonuclease III [Clostridium tetani E88]
gi|28202547|gb|AAO34992.1| endonuclease III [Clostridium tetani E88]
Length = 212
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 135/206 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K ++++ S +P K EL + + + L+VA +LSAQ TD VNK T LF+ +T
Sbjct: 1 MNKKIIKKVIETLSRTYPEAKCELDFKSPYELLVATILSAQCTDKRVNKVTSELFKGYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K++ + +++L I++ G Y KS+NI+ + ++ +F K+P+T+E L LPG+GRK
Sbjct: 61 PEKIIELSQEELGEKIKSCGFYNNKSKNILGATQKILEKFKGKVPKTMEELMSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFG+P I VDTH+FR+SNR G+A GK P++VE L++ I H++L+
Sbjct: 121 TANVVLSNAFGVPAIAVDTHVFRVSNRTGIAKGKNPDEVEMELMKNIDKDMWSITHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGRY CK+RKPQC+ C I+ C+
Sbjct: 181 WHGRYTCKSRKPQCEECPIAPYCEYF 206
>gi|323186095|gb|EFZ71451.1| endonuclease III [Escherichia coli 1357]
Length = 211
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML + + ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELAVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|332091207|gb|EGI96296.1| endonuclease III [Shigella boydii 5216-82]
Length = 211
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + + +IP+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEIPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPSEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|114330659|ref|YP_746881.1| endonuclease III [Nitrosomonas eutropha C91]
gi|114307673|gb|ABI58916.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Nitrosomonas eutropha C91]
Length = 219
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 109/209 (52%), Positives = 149/209 (71%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K EIF F P P EL Y F L+VAV+LSAQ+TD +VN AT+ LF +AD
Sbjct: 1 MNTTKR-REIFTRFRQANPHPTTELEYSTPFQLLVAVILSAQATDKSVNLATRKLFPMAD 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+K+L +GE L +I+ IG+YR K+ NI++ +LI + +++P T L +LPG+GR
Sbjct: 60 TPEKILRLGEIGLSPFIQRIGLYRTKTRNILATCQLLIEQHHSEVPHTRTELEKLPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVIL+ AFG PTI VDTHIFR++NR G+APGK +VEQ LL++IP + + +AH+WL
Sbjct: 120 KTANVILNTAFGEPTIAVDTHIFRLANRTGIAPGKNVLEVEQKLLKVIPEEFRQDAHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY CKARKP CQ C+I +LC+ ++
Sbjct: 180 ILHGRYTCKARKPLCQQCLIVDLCEFKEK 208
>gi|317401954|gb|EFV82557.1| endonuclease III [Achromobacter xylosoxidans C54]
Length = 204
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 140/201 (69%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P EL Y F L++AVLLSAQ+TD +VN AT+ F TPQ +LA+
Sbjct: 1 EIFARLQAANPQPTTELEYDTPFQLLIAVLLSAQATDKSVNIATRKFFPQYGTPQALLAL 60
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE+ L +YI+TIG+YR K++N I+ ILI + ++PQT E L LPG+GRK ANV+L+
Sbjct: 61 GEEGLSDYIKTIGLYRTKAKNAIATCRILIEQHGGEVPQTREALEALPGVGRKTANVVLN 120
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
AFG PT+ VDTHIFR+SNR GLAPGK +VE L + +P ++ +AH+WL+LHGRYVC
Sbjct: 121 TAFGQPTMAVDTHIFRVSNRTGLAPGKNVLEVELKLEKFVPREYLQDAHHWLILHGRYVC 180
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
ARKP+C C IS+LC+ +
Sbjct: 181 VARKPKCPQCGISDLCEFKAK 201
>gi|299133274|ref|ZP_07026469.1| endonuclease III [Afipia sp. 1NLS2]
gi|298593411|gb|EFI53611.1| endonuclease III [Afipia sp. 1NLS2]
Length = 274
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 117/222 (52%), Positives = 164/222 (73%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
K+ S + ++P ++ E+ F F P PKGEL ++NHFTL+VAV+LSAQ+TD
Sbjct: 43 KTSSAKTSAPKLKRWSEAEVHTAFARFRAANPDPKGELEHLNHFTLLVAVVLSAQATDAG 102
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VNKAT++LF IADTP+KML +GE L+ +I+TIG+YR K++N+I+LS LI + K+P+
Sbjct: 103 VNKATRNLFPIADTPEKMLELGEAGLREHIKTIGLYRAKAKNVIALSEQLIAQHGGKVPR 162
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
T E L LPG+GRK ANV+L++AFG TI VDTH+FR+ NR LAPG TP +VE LLR+
Sbjct: 163 TREELETLPGVGRKTANVVLNIAFGEKTIAVDTHLFRVGNRTYLAPGATPLEVELELLRV 222
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + +AH+WL+LHGRY C ARKP+C+ CII++LC+ ++
Sbjct: 223 VPDEFMRHAHHWLILHGRYTCIARKPRCEVCIINDLCRWPEK 264
>gi|238926207|ref|ZP_04657967.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
gi|238885887|gb|EEQ49525.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
Length = 210
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 87/198 (43%), Positives = 133/198 (67%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
E + +P+ + L + + F L++AV+LSAQ TD VN T LF A+TP + +
Sbjct: 10 EQLRILRSLYPNARPALTFQSPFELLIAVILSAQCTDARVNVVTGRLFPKANTPAAIAVL 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
G+ +L+ I G +R K+++II HIL++E+D ++P E L +LPG+GRK ANV++S
Sbjct: 70 GQAELEKEIHDCGFFRMKAKHIIETCHILLDEYDGEVPADFEALQKLPGVGRKTANVVMS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AF +P I VDTH+FR++NR+ LA G TP +VE+ L ++IP + +AH+WL+LHGR VC
Sbjct: 130 VAFHMPAIAVDTHVFRVANRLRLAVGTTPLEVEKGLQKVIPREDWSDAHHWLILHGRQVC 189
Query: 207 KARKPQCQSCIISNLCKR 224
KARKP C +C ++ +C
Sbjct: 190 KARKPLCDTCALAQVCPS 207
>gi|256545229|ref|ZP_05472594.1| endonuclease III [Anaerococcus vaginalis ATCC 51170]
gi|256399056|gb|EEU12668.1| endonuclease III [Anaerococcus vaginalis ATCC 51170]
Length = 215
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + E+ E+ +P+ K L + F L++A +LSAQ TDV VNK T ++F
Sbjct: 1 MIIILNKSEINEVVDRLDQMYPNLDKSFLDFTTPFELLIATILSAQCTDVRVNKVTSNMF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ A+TP+ + K++++YI+T G+Y+ K++NI + S +LI EFD +P ++ LT+LP
Sbjct: 61 KFANTPEDFSNMDIKEIESYIKTCGLYKNKAKNIKNASIMLIREFDGIVPDNMKDLTKLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV++S AFGI I VDTH+ R+SNRIGLA K E+ L + +P +
Sbjct: 121 GVGRKTANVVMSNAFGIDAIAVDTHVQRVSNRIGLAASKDVLNTEKDLRKNLPKEKWSKL 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ ++ HGR +CKAR P C+ C + +LC+ K+
Sbjct: 181 HHQIIAHGRKICKARNPLCEECDLKDLCEDYKE 213
>gi|163856035|ref|YP_001630333.1| endonuclease III [Bordetella petrii DSM 12804]
gi|163259763|emb|CAP42064.1| endonuclease III [Bordetella petrii]
Length = 211
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + IF P P EL Y F L++AVLLSAQ+TD +VN AT+ LF T
Sbjct: 1 MNAAKRQAIFARLQAANPHPTTELEYDTPFQLLIAVLLSAQATDKSVNLATRKLFPRHGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+GE L YI+TIG+YR K++N ++ +L+ ++PQT E L LPG+GRK
Sbjct: 61 PEAMLALGEDGLAEYIKTIGLYRTKAKNAVATCRLLLERHGGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR G+APGK +VE L + +P ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVANRTGIAPGKNVLEVEHKLEKFVPAEYMQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C C I++LC+ ++
Sbjct: 181 LHGRYVCVARKPKCPQCGIADLCEFKQK 208
>gi|307943421|ref|ZP_07658765.1| endonuclease III [Roseibium sp. TrichSKD4]
gi|307773051|gb|EFO32268.1| endonuclease III [Roseibium sp. TrichSKD4]
Length = 272
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 119/223 (53%), Positives = 166/223 (74%), Gaps = 2/223 (0%)
Query: 4 SKKSDS--YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
KK+ S G Y+ E EIF F P P+GEL YVN +TL+VAV+LSAQ+
Sbjct: 25 RKKAPSVDNPGKVLKRSRYSKAETAEIFQRFHADNPEPEGELDYVNAYTLLVAVVLSAQA 84
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN+ATK+LF+IADTP KM+A+GE +++ IRTIG+++ K++N+I LS LI +
Sbjct: 85 TDVGVNRATKNLFQIADTPAKMVALGEDRVREEIRTIGLFKTKAKNVILLSEQLIRDHGG 144
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+ E L +LPG+GRK ANV+L++ FG PTI VDTH+FR+SNRIG+APGKTP VE++
Sbjct: 145 EVPEDREALEKLPGVGRKTANVVLNIFFGYPTIAVDTHLFRLSNRIGMAPGKTPLDVEKA 204
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L ++IP + +AH+WL+LHGRY+CKARKP+C+ C+I +LC+
Sbjct: 205 LEKVIPQEFSQHAHHWLILHGRYICKARKPECRRCVIYDLCRS 247
>gi|325290084|ref|YP_004266265.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Syntrophobotulus glycolicus DSM 8271]
gi|324965485|gb|ADY56264.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Syntrophobotulus glycolicus DSM 8271]
Length = 209
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 125/204 (61%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
EI + + +P EL + N + L++A +LSAQ TD+ VN TK LF + Q+
Sbjct: 6 ARTAEIITILAQTYPKAGCELNFSNPYQLLIATILSAQCTDIKVNAVTKSLFADYPSAQE 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
++ + + +L+N IR +G++ K+ NI+S S IL++ + ++P + L LPG+GRK AN
Sbjct: 66 IIKLSQTELENIIRPLGLFHNKARNILSTSQILLDRYQGEVPSDMASLVSLPGVGRKTAN 125
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
VILS AF P + VDTH+FR+S R+ L GKTP++VE L IP H+ L+ HG
Sbjct: 126 VILSNAFNFPALAVDTHVFRVSRRLDLTRGKTPHQVELDLTAQIPRDLWSKTHHLLIWHG 185
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
R +CKA+KP C SC + +LC +
Sbjct: 186 RRICKAQKPACPSCPLLDLCPSAQ 209
>gi|311279504|ref|YP_003941735.1| endonuclease III [Enterobacter cloacae SCF1]
gi|308748699|gb|ADO48451.1| endonuclease III [Enterobacter cloacae SCF1]
Length = 211
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G ++ YI+TIG++ K+EN+I IL+ + +P+ L LPG+GRK
Sbjct: 61 PQAMLGLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGNVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|251779690|ref|ZP_04822610.1| endonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084005|gb|EES49895.1| endonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 208
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/201 (41%), Positives = 126/201 (62%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++I + +P K EL Y F L+VA +LSAQ+TD VN+ T+ LFE
Sbjct: 4 RTQKILDILKETYPDAKCELNYKTSFQLLVATILSAQTTDKKVNEVTQTLFEDYPDLDSF 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L I ++L+ I+ IG+YR KS+N+I + L F+ ++P+T+EG+T L G GRK ANV
Sbjct: 64 LKITNEELEQRIKQIGLYRNKSKNLILMFRQLKENFNGEVPETMEGITSLAGAGRKTANV 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AFG+P+I VDTH+FR+SNR+G+A + +VE L + +P H+ L+ HGR
Sbjct: 124 VLSNAFGVPSIAVDTHVFRVSNRLGIANSENVLEVEMQLQKELPKSEWSLTHHLLIFHGR 183
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C +R P+C+ C ++N+CK
Sbjct: 184 RCCTSRNPKCKECPLNNICKY 204
>gi|303233806|ref|ZP_07320460.1| endonuclease III [Finegoldia magna BVS033A4]
gi|302495240|gb|EFL54992.1| endonuclease III [Finegoldia magna BVS033A4]
Length = 208
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/201 (41%), Positives = 132/201 (65%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +I +P K L + F L++A +LSAQ TDV VNK T LF+ +TP+ +L
Sbjct: 6 INKILDDLDSLYPDAKAGLDFTTPFELLIATILSAQCTDVRVNKVTAVLFKEHNTPKSIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G L YI++ G+Y+ KS+NII+ ++L +++D+K+P +E L +LPG+GRK ANV+
Sbjct: 66 DLGIDGLTKYIKSCGLYKTKSKNIINTCNVLYHDYDSKVPDNIEELMKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
+S AF P I VDTH+FR++NRIG+ K E++L+R+IP + +H+ + HGR
Sbjct: 126 VSNAFDTPAIAVDTHVFRVTNRIGIVNEKDVLSTEKALMRVIPKERWSKSHHLFIWHGRN 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKAR P+C+ CI+++ CK
Sbjct: 186 ICKARNPKCEECILNDRCKFY 206
>gi|15802047|ref|NP_288069.1| endonuclease III [Escherichia coli O157:H7 EDL933]
gi|12515622|gb|AAG56622.1|AE005386_13 endonuclease III; specific for apurinic and/or apyrimidinic sites
[Escherichia coli O157:H7 str. EDL933]
Length = 211
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + ++ YI+TIG+Y K+ENII IL+ + ++++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKTYIKTIGLYNSKAENIIKXCRILLEQHNSEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|91793224|ref|YP_562875.1| endonuclease III [Shewanella denitrificans OS217]
gi|91715226|gb|ABE55152.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella denitrificans OS217]
Length = 210
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G L++YI+TIG+Y K+ N+I ILIN++ ++P+ E L LPG+GRK
Sbjct: 61 PQAIFELGVDGLKSYIKTIGLYNNKAINVIKACEILINQYQGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+SNR A GK +VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVSNRTKFAMGKNVVEVEQKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKDK 208
>gi|323698036|ref|ZP_08109948.1| endonuclease III [Desulfovibrio sp. ND132]
gi|323457968|gb|EGB13833.1| endonuclease III [Desulfovibrio desulfuricans ND132]
Length = 211
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EIF S ++P+PK L Y N + L+VA LSAQ TD VN T FE
Sbjct: 1 MNRKERAAEIFARLSRRYPAPKPALAYTNAWELLVATALSAQCTDERVNMVTPVFFERWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++ +R+ G +R K++NI + + ++ ++ ++P+T+ L L G+ R
Sbjct: 61 SIEDAAEADVAEIEEVVRSTGFFRNKAKNIKAAATRIMEVYNGEVPRTMAELITLGGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+++L+ AFG+ I VDTH+ R++ R+GL P ++E+ L+ + P + + ++
Sbjct: 121 KTASIVLANAFGVNEGIAVDTHVKRLAFRMGLTTKTEPVQIEKDLMPLFPRETWGDVNHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LV GR VC ARKP C C ++++C +
Sbjct: 181 LVFFGREVCPARKPHCDVCELNDICPK 207
>gi|302520843|ref|ZP_07273185.1| endonuclease III [Streptomyces sp. SPB78]
gi|302429738|gb|EFL01554.1| endonuclease III [Streptomyces sp. SPB78]
Length = 294
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + K I + + +P EL + + F L+VA +LSAQ+TD+ VN+
Sbjct: 39 FAKRESRAAMV--KRAHAINEVLAETYPYAHPELDFEDPFQLLVATVLSAQTTDLRVNQT 96
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF TP+ M A ++L+ IR G +R K+ +++ LS L ++FD ++P T++
Sbjct: 97 TPALFAKYPTPEDMAAAVPEELEELIRPTGFFRAKARSLLGLSAALRDDFDGEVPATVDA 156
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L +LPG+GRK A V+L AFG+P I VDTH R++ R + P KVE + I P
Sbjct: 157 LVKLPGVGRKTAFVVLGNAFGVPGITVDTHFGRLARRWKWTTSEDPVKVESDVAAIFEPS 216
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ HGR +C +R+P C +C ++ LC +
Sbjct: 217 EWTMLSHRVIFHGRRICHSRRPACGACPVAPLCPSYGE 254
>gi|310658405|ref|YP_003936126.1| DNA glycosylase and apyrimidinic (ap) lyase [Clostridium
sticklandii DSM 519]
gi|308825183|emb|CBH21221.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Clostridium sticklandii]
Length = 209
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 138/204 (67%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ I +P K EL Y + L+VA +LSAQSTDV VN TK LF+ +TP+K+
Sbjct: 3 KYNIIVKTLLDTYPDAKCELEYKTPYELLVATVLSAQSTDVRVNIVTKELFKNYNTPEKI 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L +GE+KL YI++IG Y KS+NII+LSH+LI +D+++P ++ L +LPG+GRK ANV
Sbjct: 63 LKLGEEKLMEYIKSIGFYNVKSKNIIALSHLLIQNYDSQVPDEMDELLKLPGVGRKTANV 122
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS FG+P I VDTH+FR+S R+G + K P +VEQ L++ I K+ +AH+ + HGR
Sbjct: 123 VLSNCFGVPAIAVDTHVFRVSTRLGFSDKKDPLQVEQDLMKKISKKYWTDAHHAFIFHGR 182
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+CKAR P C+ C + + CK K+
Sbjct: 183 RICKARNPICELCSVQSYCKFYKK 206
>gi|332993973|gb|AEF04028.1| endonuclease III [Alteromonas sp. SN2]
Length = 213
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + F L+VAV LSAQSTDV +NKAT LF +A+T
Sbjct: 1 MNNTKRREILTRLRDDNPHPTTELNFSTPFELLVAVTLSAQSTDVGINKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+GE L+ YI+TIG++ K++N+ LS IL+ ++D ++P++ E L LPG+GRK
Sbjct: 61 AHAIAALGEDGLKEYIKTIGLFNSKAKNVHRLSEILVEKYDGEVPESREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR LA GKT KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVEKVEEKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +CII +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGACIIEDLCEFKDK 208
>gi|89073348|ref|ZP_01159872.1| Putative endonuclease III [Photobacterium sp. SKA34]
gi|89050835|gb|EAR56309.1| Putative endonuclease III [Photobacterium sp. SKA34]
Length = 211
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I + P P+ EL++ F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNQKRVQ-ILERLRAENPHPETELHWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G ++ YI+TIG++ K+EN+I IL+++ + +IP+ E L LPG+GR
Sbjct: 60 TPQAIYDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDKHNGEIPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR A GK ++VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAMGKNVDQVEEKLLKVVPKEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC +
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCDYKDK 208
>gi|318060850|ref|ZP_07979573.1| putative endonuclease III [Streptomyces sp. SA3_actG]
gi|318080069|ref|ZP_07987401.1| putative endonuclease III [Streptomyces sp. SA3_actF]
Length = 247
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 117/205 (57%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K I + + +P EL + + F L+VA +LSAQ+TD+ VN+ T LF TP+
Sbjct: 3 KRAHAINEVLAETYPYAHPELDFEDPFQLLVATVLSAQTTDLRVNQTTPALFAKYPTPED 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M A ++L+ IR G +R K+ +++ LS L ++FD ++P T++ L +LPG+GRK A
Sbjct: 63 MAAAVPEELEELIRPTGFFRAKARSLLGLSAALRDDFDGEVPATVDALVKLPGVGRKTAF 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P I VDTH R++ R + P KVE + I P + ++ HG
Sbjct: 123 VVLGNAFGVPGITVDTHFGRLARRWKWTTSEDPVKVESDVAAIFEPSEWTMLSHRVIFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C +R+P C +C ++ LC +
Sbjct: 183 RRICHSRRPACGACPVAPLCPSYGE 207
>gi|313896540|ref|ZP_07830089.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974725|gb|EFR40191.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
Length = 209
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 134/207 (64%), Gaps = 1/207 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E + +P+ + L++ F L+VAV+LSAQ TD VN T LF A
Sbjct: 1 MRVTKAIKAEQLRILREMYPNAQPALHFATPFELLVAVILSAQCTDARVNIVTSRLFPRA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+TP+ + +G+ +L+ I G +R K+++II IL+ E+ ++P E L RLPG+G
Sbjct: 61 NTPEAIAGLGQSQLEEAIHDCGFFRMKAKHIIETCDILLREYGGEVPADFEALQRLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+AF IP I VDTH+FR+SNR+ LA GKTP +VE+ L ++IP +AH+W
Sbjct: 121 RKTANVVMSVAFHIPAIAVDTHVFRVSNRLHLAVGKTPLEVEKGLQKVIPRADWSDAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGR +CKARKP C C I+ +C
Sbjct: 181 LILHGRRLCKARKPLCGQCPIAPVCPS 207
>gi|209551017|ref|YP_002282934.1| endonuclease III [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536773|gb|ACI56708.1| endonuclease III [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 260
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 122/219 (55%), Positives = 176/219 (80%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + + Y+ E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TDV VNK
Sbjct: 21 RSKPATAVKTAYSLAEREEIFRRFSVQRPEPRGELEHSNPFTLVVAVALSAQATDVGVNK 80
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF++ADTP+KML +GE++L++YIRTIG+YR K++N+I+LS +L+++F K+P+T +
Sbjct: 81 ATRALFKVADTPEKMLDLGEERLRDYIRTIGLYRNKAKNVIALSQMLVDDFAGKVPETRD 140
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L +LPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPGKTP++VE L+++IP
Sbjct: 141 ELVKLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIKLAPGKTPDEVEARLMKVIPQ 200
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ Y+AH+WL+LHGR+ CKAR+P+C+ C+I++LCK ++
Sbjct: 201 HYLYHAHHWLILHGRHTCKARRPECERCVIADLCKSPEK 239
>gi|218295273|ref|ZP_03496109.1| endonuclease III [Thermus aquaticus Y51MC23]
gi|218244476|gb|EED11001.1| endonuclease III [Thermus aquaticus Y51MC23]
Length = 217
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 125/206 (60%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
EI +P + EL + N F L+VA +LSAQ+TD +VN+AT LF
Sbjct: 11 KKARASEILKALKALYPGARTELKHENPFQLLVATVLSAQATDKSVNEATPALFARFPDA 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + A ++++ YIR IG+YR K+ N+++L+ L+ ++ ++P+ E L RLPG+G K
Sbjct: 71 KALAAATPEEVEPYIRKIGLYRTKARNLVALARRLLEDYGGEVPRDKEALMRLPGVGWKT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L AFG+P I VDTH+ R++ R+ L+ +TP K+ + L + P H H+ LVL
Sbjct: 131 ATVVLGAAFGVPGIAVDTHVARLARRLCLSEARTPEKIAEDLEALFPKDHWVFVHHALVL 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGRYVC AR+P+C +C ++ C +
Sbjct: 191 HGRYVCTARRPRCGACPLAPHCPSRQ 216
>gi|258510450|ref|YP_003183884.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477176|gb|ACV57495.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 220
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 121/197 (61%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +P + +L++ F L+VA +LSAQ TD VN T LF P+
Sbjct: 11 RVVERLLEAYPDARCQLHFTTPFELLVATILSAQCTDERVNMVTPRLFAKYRGPEGFAKA 70
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ IR +G++R KS++I+ + IL++E+ ++P++ + L LPG+GRK ANV++S
Sbjct: 71 SPDEVAEDIREVGLFRSKSKHIVETARILVDEYGGEVPKSRDRLMELPGVGRKTANVVVS 130
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
A+G+P VDTH+ R++NRIGLA P K EQ + +PP+ AH+ L+LHGR VC
Sbjct: 131 NAYGVPAFAVDTHVQRVTNRIGLAKSNDPLKTEQQVCAKLPPELWTKAHHALILHGRRVC 190
Query: 207 KARKPQCQSCIISNLCK 223
ARKP+C C +++LC+
Sbjct: 191 TARKPKCHICPVADLCQ 207
>gi|311112137|ref|YP_003983359.1| endonuclease III [Rothia dentocariosa ATCC 17931]
gi|310943631|gb|ADP39925.1| endonuclease III [Rothia dentocariosa ATCC 17931]
Length = 308
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 78/210 (37%), Positives = 124/210 (59%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
P L T + +I + +P EL + N F L++A +LSAQ+TDV VN+ T LF
Sbjct: 51 PESHLATVRRARKINRILGETYPYAVAELDFTNAFELLIATVLSAQTTDVRVNQVTPALF 110
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ A E++++ YI+++G YR K+++I+ L+ L +++D ++P TL+ L +L
Sbjct: 111 ARYPDAPALAAATEEEVEPYIQSLGFYRAKAKSIVKLARQLTDDYDGEVPGTLDKLVKLA 170
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L AFG+P + VDTH R++ R+G P KVE + +I P+ +
Sbjct: 171 GVGRKTANVVLGNAFGVPGLTVDTHFGRLARRMGFTTEDDPVKVEHDVAELIEPREWTDF 230
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ +V HGR +C ARKP C I++LC
Sbjct: 231 SHRMVYHGRRICHARKPASGVCPIADLCPS 260
>gi|187477590|ref|YP_785614.1| endonuclease III [Bordetella avium 197N]
gi|115422176|emb|CAJ48700.1| endonuclease III [Bordetella avium 197N]
Length = 211
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P EL Y F L++AVLLSAQ+TD +VN AT+ F T
Sbjct: 1 MNAAKRREIFERLRAANPHPTTELEYETPFQLLIAVLLSAQATDKSVNIATRKFFAQHGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M+A+GE +L YI+TIG++R K++N I+ S I++ + ++P++ E L LPG+GRK
Sbjct: 61 PAGMVALGEARLAEYIKTIGLFRTKAKNAIATSRIILEQHGAEVPRSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG+PT+ VDTHIFR+SNR GLAPGK +VE L +++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGMPTMAVDTHIFRVSNRTGLAPGKNVLEVELKLEKVVPSEFKLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C AR P+C C I++LC+ +
Sbjct: 181 LHGRYICVARTPKCPQCGIADLCEFKSK 208
>gi|157828983|ref|YP_001495225.1| endonuclease III [Rickettsia rickettsii str. 'Sheila Smith']
gi|157801464|gb|ABV76717.1| endonuclease III [Rickettsia rickettsii str. 'Sheila Smith']
Length = 210
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 150/201 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LF+ DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFKTYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE++L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ALGEEELKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKALIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++NRIGLA G TP VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVANRIGLAKGGTPEIVEKELLQIIDKKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|262372075|ref|ZP_06065354.1| endonuclease III [Acinetobacter junii SH205]
gi|262312100|gb|EEY93185.1| endonuclease III [Acinetobacter junii SH205]
Length = 228
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 101/203 (49%), Positives = 147/203 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + P+P+ EL Y + F L++AV+LSAQ+TDV+VNKAT LF IA+T
Sbjct: 6 MTKKQVQTFFERLREQRPTPQTELNYSSPFELLIAVMLSAQATDVSVNKATDKLFPIANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q +L +G + L++YI+TIG+Y K+EN+I IL++++ IP+T + L LPG+GRK
Sbjct: 66 AQSILNLGVEGLKSYIKTIGLYNSKAENVIKTCQILVDQYQGNIPETRKELEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGHPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLIKVIPKEFIVDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C CI++++C
Sbjct: 186 LHGRYCCIARKPKCGECIVADVC 208
>gi|253997326|ref|YP_003049390.1| endonuclease III [Methylotenera mobilis JLW8]
gi|253984005|gb|ACT48863.1| endonuclease III [Methylotenera mobilis JLW8]
Length = 221
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF L P+P EL Y N F L++AV+LSAQ+TD +VN AT LF +A+T
Sbjct: 1 MNAEKRLEIFKRLKLAIPNPATELNYSNTFELLIAVMLSAQATDKSVNLATGKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G +L++YI+TIG+YR K++N+++ ILI + +++P + L LPG+GRK
Sbjct: 61 PESMLALGLDRLEHYIKTIGLYRSKAKNVLATCQILIQQHQSQVPNSRSALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTH+FR+ NRI LA GKT VE+ ++ IP + +AH+ L+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHLFRLGNRIKLATGKTVLDVEKKYVKTIPAEFMQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC ARKP+C C I +LC+ +
Sbjct: 181 LHGRYVCTARKPKCAECCIEDLCEYQAK 208
>gi|238898675|ref|YP_002924356.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229466434|gb|ACQ68208.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 215
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 93/208 (44%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ EI + P P+ EL Y F L+++VLLSAQ+TD++VNKAT L+ +A+T
Sbjct: 1 MNQKKRREILARLRDQNPQPRTELVYSTPFELLISVLLSAQATDLSVNKATSKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L++G L+ YI++IG++ K+ENII +L+ ++ +P+ L LPG+GRK
Sbjct: 61 PKALLSLGVNGLKEYIKSIGLFNTKAENIIKTCSLLLEKYQGAVPEDRAALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PTI VDTHIFR+ NR A G+ VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFDWPTIAVDTHIFRVCNRTKFASGQNVVLVEKKLLKVVPEEFKKDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYHCIARKPRCGSCIIRDLCEFKEK 208
>gi|328541684|ref|YP_004301793.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:endonuclease III, HhH:endonuclease III/Nth
[polymorphum gilvum SL003B-26A1]
gi|326411436|gb|ADZ68499.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:Endonuclease III, HhH:Endonuclease III/Nth
[Polymorphum gilvum SL003B-26A1]
Length = 284
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 116/226 (51%), Positives = 165/226 (73%), Gaps = 1/226 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ + + P YT +E +F F P PKGEL +VN FTL+VAV+LSAQ+
Sbjct: 27 MAEDGARPAKRR-PSRPRYTRQEAYALFERFHADNPEPKGELDHVNAFTLLVAVVLSAQA 85
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN+AT+ LF IADTP+KM+A+GE +++ IRTIG+Y+ K++N+I LS LI +
Sbjct: 86 TDVGVNRATRTLFRIADTPEKMVALGEDRVREEIRTIGLYKTKAKNVILLSQQLIRDHGG 145
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+ E L LPG+GRK ANV+L++AFG PTI VDTH+FR+ NRIG+APG+TP +VE +
Sbjct: 146 RVPENREALETLPGVGRKTANVVLNIAFGHPTIAVDTHLFRLGNRIGIAPGRTPLEVELA 205
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L +I+P + +AH+WL+LHGRY+CKARKP+C C+I +LCK ++
Sbjct: 206 LEKIVPDVFRRHAHHWLILHGRYICKARKPECARCVIYDLCKSTEK 251
>gi|227326044|ref|ZP_03830068.1| endonuclease III [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 211
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL++ F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKTKRI-EILTRLRDNNPHPTTELHFSTPFELLIAVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +L +G ++ YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GR
Sbjct: 60 TPEALLELGVDGVKGYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK +VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVEQVEEKLLKVVPAEFKVDCHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCEFGEK 208
>gi|332974422|gb|EGK11347.1| endonuclease III [Desmospora sp. 8437]
Length = 226
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 2/210 (0%)
Query: 19 LYTPKEL--EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ PK + +I + +P EL++ N F L++A +LSAQSTD VN T+ LF
Sbjct: 2 IKKPKRVQTRKILDTLAGMYPDAHCELHFRNPFELLIATILSAQSTDRQVNIVTEKLFAK 61
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+P+ L + E++L IR +G++R KS NI+ IL++ K+P+ + L LPG+
Sbjct: 62 YPSPEAFLPLTEEELAEEIRGLGLFRNKSRNILLTCRILVDTHGGKVPERRKDLEALPGV 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV+LS AFG+P + VDTH+ R+SNR+ LA P + E+ L R +P K + H+
Sbjct: 122 GRKTANVVLSNAFGVPALAVDTHVLRVSNRLALADSNQPLETEKQLTRKVPRKEWTDTHH 181
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ HGR VC AR P+C C + C K
Sbjct: 182 RLIWHGRRVCTARNPKCGECDLLPFCWYGK 211
>gi|308449144|ref|XP_003087869.1| hypothetical protein CRE_07182 [Caenorhabditis remanei]
gi|308252128|gb|EFO96080.1| hypothetical protein CRE_07182 [Caenorhabditis remanei]
Length = 225
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 102/203 (50%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + P+PK EL Y N F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPNPKTELNYSNPFELLVAVTLSAQATDVSVNKATDKLFPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+++ A+G L+ YI+TIG+Y K+EN+I ILI + ++++P L LPG+GRK
Sbjct: 66 PEQIYALGVDGLKQYIKTIGLYNAKAENVIKACKILIEKHNSQVPDNRADLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + ++H+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRLGNRTGLAVGKNVLEVEHRLIKVIPKEFIIDSHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C CI+S++C
Sbjct: 186 LHGRYCCIARKPKCNECIVSDVC 208
>gi|85709437|ref|ZP_01040502.1| endonuclease III [Erythrobacter sp. NAP1]
gi|85688147|gb|EAQ28151.1| endonuclease III [Erythrobacter sp. NAP1]
Length = 216
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ E F + P P+ EL Y N + L+VAV LSAQ+TDV VNKAT+ LF +T
Sbjct: 1 MTKDQIFEFFRRLAEDNPEPETELEYGNAYQLVVAVALSAQATDVGVNKATRALFARVET 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+ML +G L +I+TIG++ K++N+I+LS +LI+E+ ++P T E L RLPG+GRK
Sbjct: 61 PQQMLDLGLDGLIEHIKTIGLFNSKAKNVIALSQLLIDEYGGEVPDTREDLVRLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ F T VDTHI R+ NR GLA GKTP +VE L + +P + +AH+WL+
Sbjct: 121 TANVVLNCWFKQETFAVDTHILRVGNRTGLAKGKTPEQVEAKLEKRVPQPFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P+C C + +LC K+
Sbjct: 181 LHGRYVCKARTPECWRCPVVDLCSFRKK 208
>gi|283785152|ref|YP_003365017.1| endonuclease III [Citrobacter rodentium ICC168]
gi|282948606|emb|CBG88197.1| endonuclease III [Citrobacter rodentium ICC168]
Length = 211
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRASNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEKHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|227111418|ref|ZP_03825074.1| endonuclease III [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 211
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRIEILTRLRDNNPHPTTELQFSTPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G +++YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GRK
Sbjct: 61 PEALLELGVDGVKDYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFGEK 208
>gi|301157986|emb|CBW17481.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|323129723|gb|ADX17153.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
Length = 211
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I HIL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCHILLDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|261364229|ref|ZP_05977112.1| endonuclease III [Neisseria mucosa ATCC 25996]
gi|288567844|gb|EFC89404.1| endonuclease III [Neisseria mucosa ATCC 25996]
Length = 210
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL++ + F L++AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQIRKEIFERFRAANPHPTTELHFNSPFELLIAVLLSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFVPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKA+KPQC C+I++LC+ +
Sbjct: 181 LHGRYTCKAQKPQCGKCMINDLCEYGAK 208
>gi|165933707|ref|YP_001650496.1| endonuclease III [Rickettsia rickettsii str. Iowa]
gi|238650623|ref|YP_002916475.1| endonuclease III [Rickettsia peacockii str. Rustic]
gi|165908794|gb|ABY73090.1| endonuclease III [Rickettsia rickettsii str. Iowa]
gi|238624721|gb|ACR47427.1| endonuclease III [Rickettsia peacockii str. Rustic]
Length = 210
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 149/201 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LF+ DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFKTYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ALGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKALIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++NRIGLA G TP VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVANRIGLAKGGTPEIVEKELLQIIDKKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|253688406|ref|YP_003017596.1| endonuclease III [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754984|gb|ACT13060.1| endonuclease III [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 211
Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRIEILTRLRANNPHPTTELQFSTPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G +++YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GRK
Sbjct: 61 PETLLALGVDGVKDYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFGEK 208
>gi|323137137|ref|ZP_08072216.1| endonuclease III [Methylocystis sp. ATCC 49242]
gi|322397495|gb|EFY00018.1| endonuclease III [Methylocystis sp. ATCC 49242]
Length = 229
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 108/203 (53%), Positives = 149/203 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E IF P PKGELYY N F L+VAV+LSAQ+TD VNKAT LF +ADT +KM+
Sbjct: 25 VEAIFARLREANPEPKGELYYTNPFILLVAVVLSAQATDAGVNKATPALFAMADTAEKMV 84
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE +++ I+TIG++R K++N+++LS +LI +P+T E LT LPG+GRK ANV+
Sbjct: 85 ALGEDRVREAIKTIGLFRSKAKNVVALSQLLIERHGGDVPRTREELTALPGVGRKTANVV 144
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++A+ P I VDTHIFR+SNR+ LA G TP VE L I+P ++ +AH+WL+LHGRY
Sbjct: 145 LNIAYHQPVIAVDTHIFRVSNRLPLAKGATPEAVEAGLESIVPEEYLLHAHHWLILHGRY 204
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VCKARKP+C C+I++LC+ +
Sbjct: 205 VCKARKPECPRCLINDLCRFKGK 227
>gi|86747565|ref|YP_484061.1| endonuclease III [Rhodopseudomonas palustris HaA2]
gi|86570593|gb|ABD05150.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodopseudomonas palustris HaA2]
Length = 254
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 114/219 (52%), Positives = 158/219 (72%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+TP E+ E F F+ P PKGEL ++N FTL+VAV+LSAQ+TD VNK
Sbjct: 34 KPAKPPKRPRRWTPDEVREAFTRFARANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNK 93
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF IADTP KMLA+GE++++ +I+TIG++R K++N+I+LS L+++F ++P T
Sbjct: 94 ATRSLFAIADTPAKMLALGEERVREHIKTIGLFRTKAKNVIALSQKLLSDFGGQVPSTRA 153
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG GRK ANV+L+MAFG PT+ VDTH+FR+ NR GLAPG TP VE L + IPP
Sbjct: 154 ELETLPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELGLEKAIPP 213
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +AH+WL+LHGRY C ARKP+C+ C+I +LC+ ++
Sbjct: 214 EFMQHAHHWLILHGRYTCLARKPRCEVCLIVDLCRWPEK 252
>gi|288905031|ref|YP_003430253.1| endonuclease III (DNA repair) [Streptococcus gallolyticus UCN34]
gi|288731757|emb|CBI13318.1| endonuclease III (DNA repair) [Streptococcus gallolyticus UCN34]
Length = 216
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 129/206 (62%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L++I + +P +GEL + F L+VAV+LSAQ+TD VNK T +L++
Sbjct: 5 RERLKKILAIIGEMYPEARGELEWETPFQLLVAVILSAQTTDKAVNKITPNLWKKYPEIA 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ +RTIG+Y+ K++NI+ + ++ +FD K+P+T + L LPG+GRK A
Sbjct: 65 DLANANLEDVEDCLRTIGLYKNKAKNIVKTARAILRDFDGKVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +GIP+I VDTH+ RI+ R+ + AP ++EQ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVTEIEQDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C C + + CK K
Sbjct: 185 FGRYHCLAKKPKCDICPVQSYCKYYK 210
>gi|88811012|ref|ZP_01126268.1| endonuclease III [Nitrococcus mobilis Nb-231]
gi|88791551|gb|EAR22662.1| endonuclease III [Nitrococcus mobilis Nb-231]
Length = 214
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ IF+ P+P+ EL + F L++AV+LSAQ+TD +VNKAT+ LF +ADT
Sbjct: 1 MNRQKRTAIFHRLKTANPAPRTELCFRTPFELLIAVILSAQATDRSVNKATERLFAVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A+GE +L+ YI+TIG++ K+ NII IL+ +P L LPG+GRK
Sbjct: 61 PGAMWALGEPRLKEYIQTIGLFNTKARNIIECCRILLERHQGLVPNNRHDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHI R++NR GLA G TP +VE L R IP ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTLAVDTHILRVANRTGLARGHTPRQVEDKLTRWIPKEYLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP+C +C+I +LC+
Sbjct: 181 LHGRYVCTARKPRCAACVIYDLCEF 205
>gi|323704692|ref|ZP_08116270.1| endonuclease III [Thermoanaerobacterium xylanolyticum LX-11]
gi|323536154|gb|EGB25927.1| endonuclease III [Thermoanaerobacterium xylanolyticum LX-11]
Length = 214
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 122/206 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E E+ + +P K L++ N F L+VA +LSAQ TD VN T+ LF+ +P
Sbjct: 4 TKDEALEVVEILKKTYPDAKPGLHFKNAFELLVATILSAQCTDKRVNMITEKLFKKYKSP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +L+ IR G+YR KS NII+ IL +++ +P +E L LPG+GRK
Sbjct: 64 FDLKDVDPLELEEEIRDCGLYRNKSRNIINTCKILCDKYGGTVPNDMEKLMELPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV++S AF I VDTH+FR+SNRIGLA K EQ L+ I+P +H+ L+
Sbjct: 124 ANVVISNAFKQDAIAVDTHVFRVSNRIGLAESDDVLKTEQQLMDILPKNLWSLSHHILIY 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C I ++CK K
Sbjct: 184 HGRNICIARKPKCDICPIKHICKFYK 209
>gi|169633883|ref|YP_001707619.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii SDF]
gi|169796779|ref|YP_001714572.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii AYE]
gi|301345599|ref|ZP_07226340.1| endonuclease III [Acinetobacter baumannii AB056]
gi|301597670|ref|ZP_07242678.1| endonuclease III [Acinetobacter baumannii AB059]
gi|169149706|emb|CAM87597.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii AYE]
gi|169152675|emb|CAP01676.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii]
Length = 225
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 61 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 181 LHGRYCCIARKPKCSECVVADVC 203
>gi|187935458|ref|YP_001887262.1| endonuclease III [Clostridium botulinum B str. Eklund 17B]
gi|187723611|gb|ACD24832.1| endonuclease III [Clostridium botulinum B str. Eklund 17B]
Length = 208
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 126/201 (62%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++I + +P K EL Y F L+VA +LSAQ+TD VN+ TK LFE
Sbjct: 4 RTQKILDILKETYPDAKCELNYETSFQLLVATILSAQTTDKKVNEITKTLFEDYPDLDAF 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L I ++L++ I+ IG+YR KS+N+I + L F+ ++P T+EG+T L G GRK ANV
Sbjct: 64 LKITNEELEDRIKQIGLYRNKSKNLILMFRQLKENFNGEVPGTMEGITSLSGAGRKTANV 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AFG+P+I VDTH+FR+SNR+ LA + +VE L + +P H+ L+ HGR
Sbjct: 124 VLSNAFGVPSIAVDTHVFRVSNRLELANSENVLEVEMQLQKELPKSEWSLTHHLLIFHGR 183
Query: 204 YVCKARKPQCQSCIISNLCKR 224
CK+R P+C+ C ++N+CK
Sbjct: 184 RCCKSRNPKCKECPLNNICKY 204
>gi|149912034|ref|ZP_01900627.1| Putative endonuclease III [Moritella sp. PE36]
gi|149804895|gb|EDM64930.1| Putative endonuclease III [Moritella sp. PE36]
Length = 213
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRRIILERLRDNNPHPETELNFSSAFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L+ YI+TIG+Y K+ N+I ILI + ++ +P+ L+ L LPG+GRK
Sbjct: 61 PQAIFDLGVEGLKTYIKTIGLYNTKASNVIKACQILIEKHNSIVPEDLDALVELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR LA GK ++VE LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKLAMGKNVDQVEAKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LLGRYTCIARKPRCGSCLIEDLCEYKDK 208
>gi|289578750|ref|YP_003477377.1| endonuclease III [Thermoanaerobacter italicus Ab9]
gi|289528463|gb|ADD02815.1| endonuclease III [Thermoanaerobacter italicus Ab9]
Length = 213
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 127/207 (61%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF TP
Sbjct: 4 TKDEALKVIEILKETYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFNKYKTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++D+K+P+TLE L LPG+GRK
Sbjct: 64 EDFLKLTPEELQEEIRECGLYRSKSKSILETCKILKEKYDSKVPETLEELMTLPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ IIP +H+ L+
Sbjct: 124 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFATEKQLMEIIPKDLWSLSHHLLIH 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C ARKP+C C +++LC K+
Sbjct: 184 HGRNLCMARKPKCDECPVNHLCLYFKE 210
>gi|119944503|ref|YP_942183.1| endonuclease III [Psychromonas ingrahamii 37]
gi|119863107|gb|ABM02584.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Psychromonas ingrahamii 37]
Length = 211
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 146/204 (71%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ EI + P+P+ EL Y + F L+++V+LSAQ+TDV+VNKAT L+ +A+TP+ +
Sbjct: 5 KRREILMRLRAENPTPQTELNYSSPFELLISVILSAQATDVSVNKATALLYPVANTPETI 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A+G + L+ YI+TIG++ K+ N+I + LI ++++P+ E L LPG+GRK ANV
Sbjct: 65 AALGVEGLKRYIKTIGLFNSKAANVIKTCNQLITYHNSEVPENREALEALPGVGRKTANV 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AFG PTI VDTHIFR+SNR LA GK+ +VE+ LL++IP + + + H+WL+LHGR
Sbjct: 125 VLNTAFGWPTIAVDTHIFRVSNRSKLAMGKSVEEVEKKLLKVIPTEFKLDVHHWLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
Y C ARKP C SC+I +LC+ ++
Sbjct: 185 YTCVARKPHCGSCLIEDLCEFKEK 208
>gi|119962011|ref|YP_949047.1| endonuclease III [Arthrobacter aurescens TC1]
gi|119948870|gb|ABM07781.1| endonuclease III [Arthrobacter aurescens TC1]
Length = 264
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 119/211 (56%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
L + +I + + K+P EL + N F L+VA +LSAQ+TDV VN+ TK LF
Sbjct: 8 SLLALKRRARKINRVLAEKYPYAHAELDFRNPFELVVATVLSAQTTDVLVNQVTKILFAR 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ M +L+ ++ G +R K+ N+++LS L++EFD +P LE L LPG+
Sbjct: 68 YPDARAMAEADPLELETILQPTGFFRAKARNVLALSTRLVDEFDGVVPGRLEDLVTLPGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV+L AFG+P I VDTH R++ R G P K+E + + P+ +
Sbjct: 128 GRKTANVVLGNAFGVPGITVDTHFGRLARRFGWTASDDPVKIEFDVADLFEPRDWTMLSH 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+V HGR VC +RKP C +C +++LC +
Sbjct: 188 RVVFHGRRVCHSRKPACGACPVASLCPSYGE 218
>gi|255037376|ref|YP_003087997.1| endonuclease III [Dyadobacter fermentans DSM 18053]
gi|254950132|gb|ACT94832.1| endonuclease III [Dyadobacter fermentans DSM 18053]
Length = 220
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F+ +P P+ EL+Y + + L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MLKKERYKHFLDYFTQNFPEPETELHYSSPYELLVAVILSAQCTDKRVNMVTPKLFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + A +++ YIR+I K+++++ ++ +L+ +F +++P T+E L ++PG+GR
Sbjct: 61 DPESLAASNTEEVFTYIRSISYPNNKAKHLVGMARMLVEQFHSEVPSTVEDLQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F +P + VDTH+FR+S R+GL P KTP VE+ L+ IP + AH+
Sbjct: 121 KTANVIASVIFSMPAMAVDTHVFRVSRRLGLVPMTAKTPLAVERELVTHIPKHLIHKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRYVC AR PQC C +S C+ ++
Sbjct: 181 WLILHGRYVCTARNPQCFQCPLSPFCRYFEK 211
>gi|157826170|ref|YP_001493890.1| endonuclease III [Rickettsia akari str. Hartford]
gi|157800128|gb|ABV75382.1| endonuclease III [Rickettsia akari str. Hartford]
Length = 228
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 147/201 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +I +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LFE DTP+K+L
Sbjct: 6 VNKILEIFSQNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFEAYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFQELVKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
+ FG+PT+ VDTH+FR++ RIGLA G +P VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 QNCLFGMPTMAVDTHVFRVAKRIGLAKGNSPEIVEKELLQIIDGKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I + C+
Sbjct: 186 ICKARKPDCDICPIKDDCEYY 206
>gi|304312860|ref|YP_003812458.1| Endonuclease III [gamma proteobacterium HdN1]
gi|301798593|emb|CBL46823.1| Endonuclease III [gamma proteobacterium HdN1]
Length = 218
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF F P P EL Y + F L++AV+LSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MNATKRREIFQRFQAANPHPTTELEYNSPFELLIAVILSAQATDVSVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG++ K+ENII IL+ + ++P + E L LPG+GRK
Sbjct: 61 PESLFALGVDGLKAYIKTIGLFNSKAENIIKTCAILLEHHNAEVPNSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR G+APGKT +VE LLR IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVANRTGIAPGKTVLEVENKLLRYIPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP C +C+I +LC+ +
Sbjct: 181 LHGRYTCIARKPHCATCLIEDLCEYKDK 208
>gi|296268198|ref|YP_003650830.1| endonuclease III [Thermobispora bispora DSM 43833]
gi|296090985|gb|ADG86937.1| endonuclease III [Thermobispora bispora DSM 43833]
Length = 239
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
++ S G S L + + ++ I + +P EL Y + L+VA +LSAQ TD
Sbjct: 1 MSRNRSAAGESRLALVRRARRIDRI---LAETYPDAHCELDYSSPLELLVATILSAQCTD 57
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T LF T A + +L+ IR G YR K+ NII+++ L ++
Sbjct: 58 KRVNTVTPVLFAKYRTAADYAAADQAELEEIIRPTGFYRAKASNIIAMAQALCERHHGEV 117
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P LE L RLPG+GRK ANV+L AFGIP I VDTH R++ R G P K+E +
Sbjct: 118 PDRLEDLVRLPGVGRKTANVVLGNAFGIPGITVDTHFQRLARRFGWTKETDPVKIEHEVG 177
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P + L+ HGR +C AR+P C +C I+ LC
Sbjct: 178 ELFPKSSWTMLSHRLIWHGRRICHARRPACGACPIATLCPSY 219
>gi|50121210|ref|YP_050377.1| endonuclease III [Pectobacterium atrosepticum SCRI1043]
gi|49611736|emb|CAG75185.1| endonuclease III [Pectobacterium atrosepticum SCRI1043]
Length = 211
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRVEILMRLRDNNPHPTTELNFSTPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G ++ YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GRK
Sbjct: 61 PEALLTLGVDGVKGYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFGEK 208
>gi|197103504|ref|YP_002128881.1| endonuclease III [Phenylobacterium zucineum HLK1]
gi|196476924|gb|ACG76452.1| endonuclease III [Phenylobacterium zucineum HLK1]
Length = 224
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 4/221 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
K+ P + E+F F P+ EL Y + +TL+VAV LSAQ+TD
Sbjct: 1 MAKARKTTPLKPAER----ARIAELFSRFESLEGDPRTELDYQDPYTLVVAVALSAQATD 56
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V+VNKAT+ LF +ADTPQKMLA+GE+ L+ +I +IG++ K++N+I ++ IL++++ ++
Sbjct: 57 VSVNKATEKLFAVADTPQKMLALGEEGLKPFISSIGLFNTKAKNVIRMAQILVDQYGGEV 116
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P E L LPG+GRK A+V+L+ P I VDTH+FR+S+R+ L+ GKTP+ VE L+
Sbjct: 117 PLEREKLQALPGVGRKTASVVLNELRIEPAIAVDTHVFRVSHRLELSGGKTPDAVEADLM 176
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
I+P + AH+WL+LHGRY C AR+P+C+ C +++LC
Sbjct: 177 AIVPEPYLTRAHHWLILHGRYTCTARRPKCEDCPVADLCPS 217
>gi|255994514|ref|ZP_05427649.1| endonuclease III [Eubacterium saphenum ATCC 49989]
gi|255993227|gb|EEU03316.1| endonuclease III [Eubacterium saphenum ATCC 49989]
Length = 211
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 128/208 (61%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ I + +P + L + N++ LIVAV LSAQ+TD +VNK T LF+ T
Sbjct: 1 MYAAKVKRILDILERMYPDAECALVHRNNYELIVAVALSAQTTDKSVNKITPELFKAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + + I TIG+Y+ KS+NII+L++ L N++ +P + E L LPG+GRK
Sbjct: 61 TEALAKADVNDVMDIIHTIGMYKVKSKNIIALANKLQNDYGGDVPSSYEELESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+ ++ F IP++ VDTH+FR RIG + G T +KVE+ L++IIP K AH+ L+
Sbjct: 121 TANVVRAVGFNIPSLAVDTHVFRTGKRIGFSNGNTVDKVERDLMKIIPKKRWIRAHHSLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C AR P+C C I C+ ++
Sbjct: 181 FHGRNLCTARNPKCNLCDIMKYCEYTEK 208
>gi|229587104|ref|YP_002845605.1| Endonuclease III [Rickettsia africae ESF-5]
gi|228022154|gb|ACP53862.1| Endonuclease III [Rickettsia africae ESF-5]
Length = 210
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 147/201 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LF DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFATYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIQSIGLFNSKAKNIIALCKILISNYQASVPNDFKALIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++NRIGLA G TP VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVANRIGLAKGGTPEIVEKELLQIIDTKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|56413578|ref|YP_150653.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197362502|ref|YP_002142139.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|213051633|ref|ZP_03344511.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213425984|ref|ZP_03358734.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|56127835|gb|AAV77341.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197093979|emb|CAR59475.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 211
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILMDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|325978000|ref|YP_004287716.1| endonuclease III [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|325177928|emb|CBZ47972.1| endonuclease III [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 216
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 130/206 (63%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L++I + +P +GEL + F L++AV+LSAQ+TD VNK T +L++
Sbjct: 5 RERLKKILAIIGEMYPEARGELEWETPFQLLIAVILSAQTTDKAVNKITPNLWKKYPEIA 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ +RTIG+Y+ K++NII + +++ +FD K+P+T + L LPG+GRK A
Sbjct: 65 DLANANLEDVEDCLRTIGLYKNKAKNIIKTARVILRDFDGKVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +GIP+I VDTH+ RI+ R+ + AP ++EQ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVTEIEQDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C C + + CK K
Sbjct: 185 FGRYHCLAKKPKCDICPVQSYCKYYK 210
>gi|296283106|ref|ZP_06861104.1| endonuclease III [Citromicrobium bathyomarinum JL354]
Length = 217
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ E F + PSP+ EL Y N + L+VAV LSAQ+TDV VNKAT+ LF T
Sbjct: 1 MTKDQIFEFFSRLAEGNPSPETELEYGNPYQLLVAVTLSAQATDVGVNKATRALFADVKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE L+ +I+TIG++ K++N+I+++ +L++E ++PQT E L LPG+GRK
Sbjct: 61 PQQMIDLGEDGLKEHIKTIGLFNSKAKNVIAMARLLVDEHGGEVPQTREELVTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG T VDTHIFR+ NR GLA GKTP VE L + +P + +AH+WL+
Sbjct: 121 TANVVLNCAFGQETFAVDTHIFRVGNRTGLAKGKTPEAVEAKLEKRVPGPFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P+C C +S+LC K+
Sbjct: 181 LHGRYVCKARTPECWRCEVSDLCSFRKK 208
>gi|301510038|ref|ZP_07235275.1| endonuclease III [Acinetobacter baumannii AB058]
Length = 225
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 61 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFIIDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 181 LHGRYCCIARKPKCSECVVADVC 203
>gi|326390592|ref|ZP_08212148.1| endonuclease III [Thermoanaerobacter ethanolicus JW 200]
gi|325993417|gb|EGD51853.1| endonuclease III [Thermoanaerobacter ethanolicus JW 200]
Length = 216
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 128/206 (62%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T +E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF+ TP
Sbjct: 7 TKEEALKVIEILKNTYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFKKYKTP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++D+K+P+TLE L LPG+GRK
Sbjct: 67 EDFLKLTPEELQEEIRECGLYRNKSKSILETCKILKEKYDSKVPETLEELLTLPGVGRKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ +IP +H+ L+
Sbjct: 127 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFTTEKQLMELIPENLWSLSHHLLIH 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C +++LC K
Sbjct: 187 HGRNLCTARKPKCDECPVNHLCLYFK 212
>gi|167623855|ref|YP_001674149.1| endonuclease III [Shewanella halifaxensis HAW-EB4]
gi|167353877|gb|ABZ76490.1| endonuclease III [Shewanella halifaxensis HAW-EB4]
Length = 213
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNAEKRRLILERLRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+G + L+ YI+TIG+Y K+ N++ IL+ +++ ++P+ E L LPG+GRK
Sbjct: 61 AQAIAALGVEGLKPYIKTIGLYNNKAINVVKACEILVEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+ NR A GK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVCNRTKFAIGKNVVEVEKKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|297544987|ref|YP_003677289.1| endonuclease III [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296842762|gb|ADH61278.1| endonuclease III [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 213
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 127/207 (61%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF TP
Sbjct: 4 TKDEALKVIEILKETYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFNKYKTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++D+K+P+TLE L LPG+GRK
Sbjct: 64 EDFLKLTPEELQEEIRECGLYRSKSKSILETCKILKEKYDSKVPETLEELMALPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ IIP +H+ L+
Sbjct: 124 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFATEKQLMEIIPKDLWSLSHHLLIH 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C ARKP+C C +++LC K+
Sbjct: 184 HGRNLCMARKPKCDECPVNHLCLYFKE 210
>gi|16764801|ref|NP_460416.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161614128|ref|YP_001588093.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167994284|ref|ZP_02575376.1| endonuclease III [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168229828|ref|ZP_02654886.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168235526|ref|ZP_02660584.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168240969|ref|ZP_02665901.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168819204|ref|ZP_02831204.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194450299|ref|YP_002045491.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194471537|ref|ZP_03077521.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194736372|ref|YP_002114466.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248131|ref|YP_002146592.1| endonuclease III [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197265437|ref|ZP_03165511.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|204927862|ref|ZP_03219063.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205352834|ref|YP_002226635.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207857043|ref|YP_002243694.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|238913146|ref|ZP_04656983.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|16419974|gb|AAL20375.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161363492|gb|ABX67260.1| hypothetical protein SPAB_01867 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408603|gb|ACF68822.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457901|gb|EDX46740.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194711874|gb|ACF91095.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197211834|gb|ACH49231.1| endonuclease III [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243692|gb|EDY26312.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197290940|gb|EDY30293.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204323204|gb|EDZ08400.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205272615|emb|CAR37524.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205327850|gb|EDZ14614.1| endonuclease III [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205335531|gb|EDZ22295.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205339674|gb|EDZ26438.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205343600|gb|EDZ30364.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206708846|emb|CAR33176.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261246657|emb|CBG24467.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993343|gb|ACY88228.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|312912436|dbj|BAJ36410.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320086071|emb|CBY95845.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321224072|gb|EFX49135.1| Endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615067|gb|EFY11990.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619130|gb|EFY16014.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322622218|gb|EFY19063.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627740|gb|EFY24530.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632915|gb|EFY29659.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636594|gb|EFY33297.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322641213|gb|EFY37855.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322644852|gb|EFY41385.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650312|gb|EFY46726.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655884|gb|EFY52186.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660212|gb|EFY56451.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665223|gb|EFY61411.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669480|gb|EFY65628.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673406|gb|EFY69508.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677334|gb|EFY73398.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680003|gb|EFY76042.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687475|gb|EFY83447.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194071|gb|EFZ79270.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198553|gb|EFZ83654.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202880|gb|EFZ87915.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323208599|gb|EFZ93537.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323210285|gb|EFZ95181.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215853|gb|EGA00592.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220752|gb|EGA05194.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226851|gb|EGA11035.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323229378|gb|EGA13501.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236877|gb|EGA20949.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240361|gb|EGA24405.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323242650|gb|EGA26671.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323252426|gb|EGA36273.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258556|gb|EGA42223.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260358|gb|EGA43975.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323267228|gb|EGA50713.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323272747|gb|EGA56152.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326627905|gb|EGE34248.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
gi|332988338|gb|AEF07321.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 211
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|306831104|ref|ZP_07464265.1| endonuclease III [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304426670|gb|EFM29781.1| endonuclease III [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 216
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 129/206 (62%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L++I + +P +GEL + F L++AV+LSAQ+TD VNK T +L++
Sbjct: 5 RERLKKILAIIGEMYPEARGELEWETPFQLLIAVILSAQTTDKAVNKITPNLWKKYPEIA 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ +RTIG+Y+ K++NI+ + ++ +FD K+P+T + L LPG+GRK A
Sbjct: 65 DLANANLEDVEDCLRTIGLYKNKAKNIVKTARAILRDFDGKVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +GIP+I VDTH+ RI+ R+ + AP ++EQ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVTEIEQDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C C + + CK K
Sbjct: 185 FGRYHCLAKKPKCDICPVQSYCKYYK 210
>gi|225023943|ref|ZP_03713135.1| hypothetical protein EIKCOROL_00810 [Eikenella corrodens ATCC
23834]
gi|224942968|gb|EEG24177.1| hypothetical protein EIKCOROL_00810 [Eikenella corrodens ATCC
23834]
Length = 210
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P++ EIF P+P EL + + F L++AVLLSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNPQKRREIFQRLHDANPNPTTELVFHSPFELLIAVLLSAQATDKGVNKATAKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L Y RTIG+Y+ KS++I+ +L+ + ++P T E L LPG+GRK
Sbjct: 61 PQAILDLGLDQLMEYTRTIGLYQTKSKHIMQTCRLLLEKHGGEVPNTREALEELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR+ LAPGK +VE L+R +P + NAH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVANRMNLAPGKNVREVEDKLMRFVPKEFLLNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKA+KPQC CI+ +LC+ +
Sbjct: 181 LHGRYTCKAQKPQCHECIVYDLCEYKGK 208
>gi|59711536|ref|YP_204312.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Vibrio fischeri ES114]
gi|59479637|gb|AAW85424.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Vibrio fischeri ES114]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 147/209 (70%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K L EI + P+P+ EL + F L++AVLLSAQ+TDV+VNKAT+ L+ +A+
Sbjct: 1 MNNVKRL-EILERLRSENPNPQTELEWSTPFELLIAVLLSAQATDVSVNKATRKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN+I +LI+ D +IP+ + L LPG+G
Sbjct: 60 TPQSILDLGVDGLKTYIKTIGLFNTKAENVIKTCRMLIDLHDGEIPEDQDALEALPGVGH 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT N VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVNDVEKKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCMIEDLCEFKEK 208
>gi|213156828|ref|YP_002318489.1| endonuclease III [Acinetobacter baumannii AB0057]
gi|193076746|gb|ABO11456.2| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii ATCC 17978]
gi|213055988|gb|ACJ40890.1| endonuclease III [Acinetobacter baumannii AB0057]
Length = 230
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 186 LHGRYCCIARKPKCSECVVADVC 208
>gi|157826446|ref|YP_001495510.1| endonuclease III [Rickettsia bellii OSU 85-389]
gi|157801750|gb|ABV78473.1| Endonuclease III [Rickettsia bellii OSU 85-389]
Length = 213
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 111/207 (53%), Positives = 155/207 (74%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +IF +FS +PK EL Y N+FTL+VAV+LSAQ+TDV+VN ATK LFEI DT
Sbjct: 1 MQAEIVNKIFEVFSKNNENPKTELVYKNNFTLLVAVILSAQATDVSVNLATKSLFEIYDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K+L +GE+ L+ YI++IG++ K++N+I+L ILI+ +D+K+P E L +LPG+GRK
Sbjct: 61 PEKILGLGEEGLKKYIKSIGLFNSKAKNVIALCQILISNYDSKVPNNFEELVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FG+PT+ VDTH+FR++ RIGLA G TP VE+ LL+II K +AH+WL+
Sbjct: 121 TANVVLNCLFGLPTMAVDTHVFRVAKRIGLAKGNTPEAVEKELLQIIDGKWLSHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGRY+CKARKP C+ C I C+ K
Sbjct: 181 LHGRYICKARKPDCEICPIKEYCEYYK 207
>gi|24374058|ref|NP_718101.1| endonuclease III [Shewanella oneidensis MR-1]
gi|24348533|gb|AAN55545.1|AE015693_7 endonuclease III [Shewanella oneidensis MR-1]
Length = 231
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/206 (47%), Positives = 141/206 (68%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNQQKRIQ-ILTRLRENNPKPQTELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A+G + L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GR
Sbjct: 60 TAHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+LHGRY C ARKP+C SCII +LC+
Sbjct: 180 ILHGRYTCLARKPRCGSCIIEDLCEY 205
>gi|16760460|ref|NP_456077.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141780|ref|NP_805122.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|213029555|ref|ZP_03344002.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
gi|213420538|ref|ZP_03353604.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
gi|213616230|ref|ZP_03372056.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213855041|ref|ZP_03383281.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|25292141|pir||AI0692 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502756|emb|CAD01914.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137408|gb|AAO68971.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ A+T
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILMDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|332853652|ref|ZP_08434882.1| endonuclease III [Acinetobacter baumannii 6013150]
gi|332870831|ref|ZP_08439476.1| endonuclease III [Acinetobacter baumannii 6013113]
gi|332728476|gb|EGJ59850.1| endonuclease III [Acinetobacter baumannii 6013150]
gi|332731932|gb|EGJ63210.1| endonuclease III [Acinetobacter baumannii 6013113]
Length = 230
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 186 LHGRYCCIARKPKCSECVVADVC 208
>gi|227505666|ref|ZP_03935715.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Corynebacterium striatum ATCC 6940]
gi|227197740|gb|EEI77788.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Corynebacterium striatum ATCC 6940]
Length = 226
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 113/200 (56%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I L + ++P + EL + N L+VA +LSAQ TD VN+ T LF
Sbjct: 9 RASRINELLAREYPDAECELDFSNPLELLVATVLSAQCTDARVNQVTPELFAKYPDAAHY 68
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A L+ +R +G R K+ ++I + L+ ++ ++PQ ++ LT LPG+GRK A V
Sbjct: 69 AAASRSDLEAILRPLGFQRAKAGHLIGIGEKLMADYGGEVPQGIKELTELPGVGRKTALV 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ AFG+P + VDTH R+ R+GL+ KTP K+E+ + ++P + + ++ HGR
Sbjct: 129 VRGNAFGLPGLTVDTHFGRLMQRMGLSQSKTPLKIEKDIAELLPEQEWTMFSHRIIFHGR 188
Query: 204 YVCKARKPQCQSCIISNLCK 223
VC +RKP+C+ C++ LC
Sbjct: 189 RVCHSRKPECEVCVVRKLCP 208
>gi|317121615|ref|YP_004101618.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Thermaerobacter marianensis DSM 12885]
gi|315591595|gb|ADU50891.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Thermaerobacter marianensis DSM 12885]
Length = 271
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 120/192 (62%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P L + F L+VA +LSAQ+TD VN+ T LF TP ML + E +L
Sbjct: 16 LARMYPDATTALNWRTPFELLVATILSAQTTDAAVNQVTPALFARCPTPAAMLELTEDEL 75
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
IRTIG++R K+ N+++ IL+ ++P+T E L +LPG+GRK ANV+LS AFGI
Sbjct: 76 GAMIRTIGLWRNKARNLLAACRILVERHGGQVPRTREELVQLPGVGRKTANVVLSNAFGI 135
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH+FR++ R+GLA G TP +VEQ L+ IP AH+WL+ HGR +C AR P
Sbjct: 136 PAIAVDTHVFRVARRLGLASGTTPERVEQELMEKIPEAEWSRAHHWLIWHGRRICHARNP 195
Query: 212 QCQSCIISNLCK 223
+C C + C
Sbjct: 196 RCDLCALRPDCP 207
>gi|164687678|ref|ZP_02211706.1| hypothetical protein CLOBAR_01320 [Clostridium bartlettii DSM
16795]
gi|164603452|gb|EDQ96917.1| hypothetical protein CLOBAR_01320 [Clostridium bartlettii DSM
16795]
Length = 209
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 127/203 (62%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K + +I +P + EL Y F L++A +LSAQ TDV VNK T+ LF+ +TP++
Sbjct: 2 KNVNKILDKLEEIYPDAQCELNYETPFELLIATILSAQCTDVRVNKVTEVLFKKYNTPEQ 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
A+ E+++ IR+ G+Y+ KS+ I S ++ F ++PQTL+ LT LPG+GRK A+
Sbjct: 62 FAALTEEEIGEEIRSCGLYKSKSKKIKESSRMICENFGGEVPQTLKELTTLPGVGRKTAD 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+LS AF I VDTH+FR++NRIG+ K K E +L+ +IP ++H+ + HG
Sbjct: 122 VVLSNAFNHDAIAVDTHVFRVTNRIGIVNEKNVEKTEFALMDVIPKNRWSHSHHLFIFHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R +CKARKP+C +C I + C
Sbjct: 182 RRMCKARKPECDTCPIKDDCDYY 204
>gi|170726908|ref|YP_001760934.1| endonuclease III [Shewanella woodyi ATCC 51908]
gi|169812255|gb|ACA86839.1| endonuclease III [Shewanella woodyi ATCC 51908]
Length = 212
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + I + P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF IA+T
Sbjct: 1 MNKEKRQAILSILRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AQSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI +DTHIFR++NR A GK ++VE+ +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAIDTHIFRVANRTKFAMGKNVDQVEEKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEELCEFKEK 208
>gi|198242866|ref|YP_002215682.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197937382|gb|ACH74715.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326623428|gb|EGE29773.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN++ IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVVKTCRILLDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|20808188|ref|NP_623359.1| EndoIII-related endonuclease [Thermoanaerobacter tengcongensis MB4]
gi|20516781|gb|AAM24963.1| predicted EndoIII-related endonuclease [Thermoanaerobacter
tengcongensis MB4]
Length = 213
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 123/206 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +E ++ + +P+ K L + N F L++A +LSAQ TD VN T+ LF+ TP
Sbjct: 4 SKEEALKVIEILKKIYPNAKSGLKFNNPFELLIATILSAQCTDKRVNIITERLFKKYKTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL + + K+P TLE L LPG+GRK
Sbjct: 64 EDFLKLTPEELQEEIRECGLYRNKSKSILETCRILKEKHNGKVPDTLEELMALPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ IIP +H+ L+
Sbjct: 124 ANVVLSNAFSKDAIAVDTHVFRVSNRIGLADSKDVLTTEKQLMEIIPKNLWSISHHLLIY 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C + C K
Sbjct: 184 HGRNLCTARKPKCDKCPVKEFCLYFK 209
>gi|167551576|ref|ZP_02345330.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168264624|ref|ZP_02686597.1| endonuclease III [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168463135|ref|ZP_02697066.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194445755|ref|YP_002040702.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|200390941|ref|ZP_03217552.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224584038|ref|YP_002637836.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|194404418|gb|ACF64640.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195634314|gb|EDX52666.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|199603386|gb|EDZ01932.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205323585|gb|EDZ11424.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205346941|gb|EDZ33572.1| endonuclease III [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|224468565|gb|ACN46395.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|15893977|ref|NP_347326.1| endonuclease, gene nth [Clostridium acetobutylicum ATCC 824]
gi|15023567|gb|AAK78666.1|AE007584_2 Predicted endonuclease, gene nth [Clostridium acetobutylicum ATCC
824]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 131/208 (62%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ +I + +P K L + + L++A +LSAQ TD VN T+ LF+ +T
Sbjct: 1 MEKEKVNKIVDILYEMYPQAKCALDFKTPYELLIATVLSAQCTDKRVNLVTQELFKEYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KM + E++LQ IRT G+Y+ KS+NI+ S LI+ F+ ++P +E LT LPG+GRK
Sbjct: 61 PYKMCELTEEELQEKIRTCGLYKNKSKNILEASRGLIDRFNGEVPSNMEELTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++S AFGIP I VDTH+FR+SNRIGLA K + E+ L+ I K H+ L+
Sbjct: 121 TANVVMSNAFGIPAIAVDTHVFRVSNRIGLAKSKNVYETEKQLMENIDKKDWSTMHHALI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +CKAR+P C+ C + +C K+
Sbjct: 181 WHGRQICKARRPDCEKCGLKEVCNYFKE 208
>gi|261821590|ref|YP_003259696.1| endonuclease III [Pectobacterium wasabiae WPP163]
gi|261605603|gb|ACX88089.1| endonuclease III [Pectobacterium wasabiae WPP163]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKVKRV-EILTRLRDNNPHPTTELNFSTPFELLIAVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +L +G +++YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GR
Sbjct: 60 TPEALLELGVDGVKSYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+SNR G APGK +VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVEQVEEKLLKVVPAEFKVDCHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCEFGEK 208
>gi|34581251|ref|ZP_00142731.1| endonuclease III [Rickettsia sibirica 246]
gi|28262636|gb|EAA26140.1| endonuclease III [Rickettsia sibirica 246]
Length = 210
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 147/201 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LF DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFATYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKALIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++NRIGLA G TP VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVANRIGLAKGGTPEIVEKELLQIIDTKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|119774971|ref|YP_927711.1| endonuclease III [Shewanella amazonensis SB2B]
gi|119767471|gb|ABM00042.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Shewanella amazonensis SB2B]
Length = 213
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNNQKRV-EILTRLRANNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ++ +G + L+ YI+TIG++ K+ N++ LS IL+++ ++P+ E L LPG+GR
Sbjct: 60 TPQAIVDLGVEGLKEYIKTIGLFNNKAINVVKLSQILLDKHGGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRMANRTRFAPGKNVVEVEERMLKVVPAEFKVDVHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCLARKPRCGSCIIEDLCEFKDK 208
>gi|283833250|ref|ZP_06352991.1| endonuclease III [Citrobacter youngae ATCC 29220]
gi|291070886|gb|EFE08995.1| endonuclease III [Citrobacter youngae ATCC 29220]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPSEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|294011940|ref|YP_003545400.1| putative endonuclease III [Sphingobium japonicum UT26S]
gi|292675270|dbj|BAI96788.1| putative endonuclease III [Sphingobium japonicum UT26S]
Length = 216
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/205 (50%), Positives = 147/205 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + F + P+P+ EL Y N + L+VAV+LSAQ+TDV VNKAT+ LF T
Sbjct: 1 MNKDRIFDFFSRLAEANPAPRTELEYDNDYQLLVAVVLSAQATDVGVNKATRALFREVRT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE+ L+ +I+TIG++ K++N+I+LS IL+ +F ++PQ + LT LPG+GRK
Sbjct: 61 PQQMVDLGEEGLKAHIKTIGLFNAKAKNVIALSEILVRDFGGEVPQDRDILTTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG T VDTHIFR+ NR GLAPGKTP VE L + +P + +AH+WL+
Sbjct: 121 TANVVMNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVELKLEKRVPGPFRRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C CI+++LC+
Sbjct: 181 LHGRYVCKARKPECWRCIVADLCRF 205
>gi|225872370|ref|YP_002753825.1| endonuclease III [Acidobacterium capsulatum ATCC 51196]
gi|225793386|gb|ACO33476.1| endonuclease III [Acidobacterium capsulatum ATCC 51196]
Length = 230
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 1/222 (0%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
S +P+ + EI +P + L + + + L+VA +LSAQ TD V
Sbjct: 2 PRKSAKASSKKRDRSPERVAEILRRLRAAYPDAECALLHRSPWELLVATILSAQCTDARV 61
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T LF TPQ M + ++ Y+++ G YR K+++I + L+ + K+P++
Sbjct: 62 NMVTPKLFRDFPTPQAMAQATPEAIEEYVKSTGFYRNKAKSIHGAAKRLVEVYGGKLPES 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
++ L LPG RK ANV+L +AFG + VDTH+ R+SNR+GL P KVEQ L++I
Sbjct: 122 MDELLTLPGAARKTANVVLGVAFGKAEGVVVDTHVLRLSNRLGLVNSNDPKKVEQELMQI 181
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + + ++ HGR VC ARKP+C+ C + LC +
Sbjct: 182 LPRERWIQFSHEMIYHGRQVCDARKPKCEVCTLETLCHSGDK 223
>gi|161503455|ref|YP_001570567.1| endonuclease III [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160864802|gb|ABX21425.1| hypothetical protein SARI_01529 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 211
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PSAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPSEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKEK 208
>gi|326383486|ref|ZP_08205173.1| endonuclease III [Gordonia neofelifaecis NRRL B-59395]
gi|326197892|gb|EGD55079.1| endonuclease III [Gordonia neofelifaecis NRRL B-59395]
Length = 250
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + LG + + +P EL + L VA +LSAQ TDV VN+
Sbjct: 4 RKEETRLGLVR---RARRMNRSLEAAFPHVYCELDFTTPLELSVATILSAQCTDVRVNQV 60
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF + +L+ IR+ G YR K+ +II L L++ + ++P L+
Sbjct: 61 TPALFARYPDARSYAEADRTELEEMIRSTGFYRNKANSIIGLGQALVSRYGGEVPNRLKD 120
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG GRK ANV+L AFG+P I VDTH R+ R P KVE+ + + +
Sbjct: 121 LVTLPGFGRKTANVVLGNAFGVPGITVDTHFGRLVRRWNWTQETDPVKVEREIGELFEKR 180
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ HGR VC ARKP C C+++ C +
Sbjct: 181 DWTDLSHRIIFHGRRVCHARKPACGVCVLAKDCPSYGE 218
>gi|309389076|gb|ADO76956.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Halanaerobium praevalens DSM 2228]
Length = 218
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 137/206 (66%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K++E + LFS +P P L Y F L++A +LSAQ+TD+ VNK TK LF+ +TP
Sbjct: 7 KRKKVETLVKLFSKHYPEPGTALNYRTPFELLIATILSAQTTDIQVNKVTKKLFKNYNTP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K+L + +K+L+ I +IG+YR K++ I+ + ILI EF++++P+T + L +L G+GRK
Sbjct: 67 KKILNLSQKELEKKINSIGLYRNKAKYILKTAKILIEEFNSQVPKTRKELLKLSGVGRKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF VDTH+FR+S R+GL+ GK + E+ L +IP K+ + H+WL+
Sbjct: 127 ANVVLSSAFAKAAFPVDTHVFRVSARLGLSSGKNVSTTEKELTDLIPRKYWIDFHHWLID 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +CKA+ P C++C +C +
Sbjct: 187 HGRALCKAQNPDCKNCFAKKICNYYQ 212
>gi|197336267|ref|YP_002155692.1| endonuclease III [Vibrio fischeri MJ11]
gi|197317757|gb|ACH67204.1| endonuclease III [Vibrio fischeri MJ11]
Length = 211
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K L EI + P+P+ EL + F L++AVLLSAQ+TDV+VNKAT+ L+ +A+
Sbjct: 1 MNNVKRL-EILERLRSENPNPQTELEWSTPFELLIAVLLSAQATDVSVNKATRKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN+I +LI+ +IP+ E L LPG+G
Sbjct: 60 TPQSILDLGVDGLKTYIKTIGLFNTKAENVIKTCRMLIDLHGGEIPEDQEALEALPGVGH 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR A GKT N VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVNDVEKKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCMIEDLCEFKEK 208
>gi|326329529|ref|ZP_08195852.1| endonuclease III [Nocardioidaceae bacterium Broad-1]
gi|325952696|gb|EGD44713.1| endonuclease III [Nocardioidaceae bacterium Broad-1]
Length = 238
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 3/222 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
+ + + LG + + ++ I +P K EL + N F +V +LSAQ+TD
Sbjct: 2 PAQKFATETRLGLVRRARRIDRI---LGETYPDAKAELDFTNPFECLVVTVLSAQTTDKR 58
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN A+ LF T ++M A + L+ + +G +R K++ ++ LS +L+ E+D ++P
Sbjct: 59 VNLASPALFAAYPTAKEMAAAPREHLEQLVGPLGFFRAKTDALLKLSAVLVEEYDGEVPS 118
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
LE L +LPG+GRK ANV+L AFG P I VDTH R+S R G K P KVE + +
Sbjct: 119 RLEQLVKLPGVGRKTANVVLGNAFGKPGITVDTHFGRLSRRFGWTTEKDPVKVEHEVGAL 178
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ HGR +C A+KP C +C +S LC +
Sbjct: 179 FEKRDWTMLSHHVIWHGRRICHAQKPACGACPVSQLCPAYGE 220
>gi|260886401|ref|ZP_05897664.1| endonuclease III [Selenomonas sputigena ATCC 35185]
gi|330838833|ref|YP_004413413.1| endonuclease III [Selenomonas sputigena ATCC 35185]
gi|260863922|gb|EEX78422.1| endonuclease III [Selenomonas sputigena ATCC 35185]
gi|329746597|gb|AEB99953.1| endonuclease III [Selenomonas sputigena ATCC 35185]
Length = 209
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 133/207 (64%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEI-FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K++ E + + K EL++ N F L++AV+LSAQ TD VN T LF+ A
Sbjct: 1 MRVTKKIREKQLEILEETYRGAKPELHFSNPFELLIAVILSAQCTDKRVNITTARLFKKA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP ++A+G L+ I+ G++R K++NI++ L+ EF ++P + L +LPG+G
Sbjct: 61 ATPAAIVALGISGLEEEIKDCGLFRNKAKNIMATCRTLVEEFGGEVPSDYDTLLKLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+ S+AFG P I VDTH+FRI+NR+ LA G+TP VE+ L+++IP + AH+W
Sbjct: 121 RKTANVVTSVAFGRPAIAVDTHVFRIANRLKLAVGETPLAVEKGLMKVIPREKWSAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR VCKA +P C C ++++C
Sbjct: 181 LIYHGRRVCKANRPLCGECPLADVCPS 207
>gi|261339608|ref|ZP_05967466.1| endonuclease III [Enterobacter cancerogenus ATCC 35316]
gi|288318430|gb|EFC57368.1| endonuclease III [Enterobacter cancerogenus ATCC 35316]
Length = 211
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I + P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRIAILTRLRNENPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATALLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G + +++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PEAMLALGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|300857624|ref|YP_003782607.1| endonuclease III [Corynebacterium pseudotuberculosis FRC41]
gi|300685078|gb|ADK28000.1| endonuclease III [Corynebacterium pseudotuberculosis FRC41]
gi|302205362|gb|ADL09704.1| Endonuclease III [Corynebacterium pseudotuberculosis C231]
gi|302329916|gb|ADL20110.1| Endonuclease III [Corynebacterium pseudotuberculosis 1002]
gi|308275600|gb|ADO25499.1| Endonuclease III [Corynebacterium pseudotuberculosis I19]
Length = 268
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 6 KSDSYQG-NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
+ + +G +PLG + I L S+ +P EL + L VA +LSAQ TDV
Sbjct: 22 RHRATRGQETPLG---KKRRARRINRLLSIGYPEAHCELDFKTPLELTVATVLSAQCTDV 78
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VN+ T LF T E +LQ IR G Y+ K+ ++I L L+ +F +IP
Sbjct: 79 RVNQVTPRLFSRYPTAWDYANANELELQELIRPTGFYKAKAAHLIGLGQKLVTDFGGEIP 138
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
Q+++ L LPG+GRK ANV+ AFGIP + VDTH R+ R+GL+ P KVE L
Sbjct: 139 QSIQDLVSLPGVGRKTANVVRGNAFGIPGLTVDTHFGRLVRRMGLSSHTDPLKVEAELAE 198
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+I K + ++ HGR VC +RK C +C ++ C
Sbjct: 199 LIEKKEWTMFSHRIIFHGRRVCHSRKAACGACFLAAECPSF 239
>gi|307825394|ref|ZP_07655613.1| endonuclease III [Methylobacter tundripaludum SV96]
gi|307733569|gb|EFO04427.1| endonuclease III [Methylobacter tundripaludum SV96]
Length = 241
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/214 (48%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+P + K L+ IF + P P EL+Y + F L++AV+LSAQ+TD VNKAT L
Sbjct: 11 TPNITMNLKKRLD-IFDRLAAAIPEPTTELHYTSTFELLIAVVLSAQATDKGVNKATAKL 69
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A+TP +LA+GE L+ YI+TIG++ K+ +II+L L+++ ++PQT E L L
Sbjct: 70 FPVANTPGDILALGETGLKEYIKTIGLFNSKATHIITLCRQLLDKHAGEVPQTREELEAL 129
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK ANVIL+ AFG TI VDTHIFR++NR G+APGK +VE+ L + +P +H+ +
Sbjct: 130 AGVGRKTANVILNTAFGRHTIAVDTHIFRVANRTGIAPGKNVLEVERKLDKWVPKQHKKD 189
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
AH+ L+LHGRY C ARKP+C+SC+I +LC+ +
Sbjct: 190 AHHLLILHGRYTCIARKPRCESCVIEDLCEYEHK 223
>gi|295837441|ref|ZP_06824374.1| endonuclease III [Streptomyces sp. SPB74]
gi|295826526|gb|EDY42977.2| endonuclease III [Streptomyces sp. SPB74]
Length = 247
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 115/205 (56%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + + +P EL + + F L+VA +LSAQ+TD+ VN+ T LF P+
Sbjct: 3 ERAHAINEVLAETYPYAHPELDFEDPFQLLVATVLSAQTTDLRVNQTTPALFAKYPAPED 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M A ++L+ IR G +R K+ +++ LS L ++F ++P T++ L +LPG+GRK A
Sbjct: 63 MAAAVPEELEELIRPTGFFRAKARSLLGLSAALRDDFGGEVPATVDALVKLPGVGRKTAF 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P I VDTH R++ R + P KVE + I P + ++ HG
Sbjct: 123 VVLGNAFGVPGITVDTHFGRLARRWKWTASEDPVKVESDVAEIFEPGEWTMLSHRVIFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C +R+P C +C ++ LC +
Sbjct: 183 RRICHSRRPACGACPVAPLCPSYGE 207
>gi|307267279|ref|ZP_07548780.1| endonuclease III [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917707|gb|EFN47980.1| endonuclease III [Thermoanaerobacter wiegelii Rt8.B1]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 128/206 (62%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T +E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF+ TP
Sbjct: 7 TKEEALKVIEILKNTYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFKKYKTP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++D+K+P+TLE L LPG+GRK
Sbjct: 67 EDFLKLTPEELQEEIRECGLYRNKSKSILETCKILKEKYDSKVPETLEELMTLPGVGRKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ +IP +H+ L+
Sbjct: 127 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFTTEKQLMELIPENLWSLSHHLLIH 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C +++LC K
Sbjct: 187 HGRNLCTARKPKCDECPVNHLCLYFK 212
>gi|153000583|ref|YP_001366264.1| endonuclease III [Shewanella baltica OS185]
gi|151365201|gb|ABS08201.1| endonuclease III [Shewanella baltica OS185]
Length = 213
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVDGLKQYIKTIGLYNNKAVNVIKACEILIEKYNGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEDKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|254518062|ref|ZP_05130118.1| endonuclease III [Clostridium sp. 7_2_43FAA]
gi|226911811|gb|EEH97012.1| endonuclease III [Clostridium sp. 7_2_43FAA]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 127/206 (61%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + I +P K EL + + F L+VA +LSAQ+TD VN+ T+ LF
Sbjct: 2 KQRTKTILETLKEDYPDAKCELNHESAFQLLVATILSAQTTDKKVNEVTETLFRDYPDLD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
L + ++L+ I+ IG+YR K++N+I + + L +F+ ++P T+E +T L G GRK A
Sbjct: 62 SFLTLTVEELEKRIKQIGLYRSKAKNLIMMCNQLKEKFNGEVPNTMEEITSLAGAGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AFG+P+I VDTH+FR+SNR+GLA +VE+ L + +P + AH+ L+ H
Sbjct: 122 NVVLSNAFGVPSIAVDTHVFRVSNRLGLADSDNVLEVEKQLQKELPKREWSLAHHLLIFH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GR C AR P+C+ C ++ CK K+
Sbjct: 182 GRRCCIARNPKCEICNLTKQCKYYKE 207
>gi|306833211|ref|ZP_07466340.1| endonuclease III [Streptococcus bovis ATCC 700338]
gi|304424578|gb|EFM27715.1| endonuclease III [Streptococcus bovis ATCC 700338]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 128/206 (62%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L++I + +P +GEL + F L++AV+LSAQ+TD VNK T +L++
Sbjct: 5 RERLKKILAIIGEMYPEARGELEWETPFQLLIAVILSAQTTDKAVNKITPNLWKKYPEIA 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ +RTIG+Y+ K++NI+ + ++ +FD K+P+T + L LPG+GRK A
Sbjct: 65 DLANANLEDVEDCLRTIGLYKNKAKNIVKTARAILRDFDGKVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +GIP+I VDTH+ RI+ R+ + AP ++EQ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVTEIEQDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C C + CK K
Sbjct: 185 FGRYHCLAKKPKCDICPVQAYCKYYK 210
>gi|157145894|ref|YP_001453213.1| endonuclease III [Citrobacter koseri ATCC BAA-895]
gi|157083099|gb|ABV12777.1| hypothetical protein CKO_01645 [Citrobacter koseri ATCC BAA-895]
Length = 211
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNKTKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRMLLELHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|316931677|ref|YP_004106659.1| endonuclease III [Rhodopseudomonas palustris DX-1]
gi|315599391|gb|ADU41926.1| endonuclease III [Rhodopseudomonas palustris DX-1]
Length = 260
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 118/219 (53%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ G SP ++ E+ E F F+ P PKGEL ++N FTL+VAV+LSAQ+TD VNK
Sbjct: 41 ARPGKSPRR--WSAAEVHEAFSRFAKANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNK 98
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF +ADTPQKMLA+GE++++ YI+TIG++R K++N+I+LS LI +F ++P T E
Sbjct: 99 ATRPLFAVADTPQKMLALGEERVREYIKTIGLFRTKAKNVIALSQKLITDFGGEVPDTRE 158
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG GRK ANV+L+MAFG PT+ VDTH+FR+ NR GLAPG+TP VE L R+IP
Sbjct: 159 ALETLPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGETPLAVELELERVIPA 218
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +AH+WL+LHGRY C ARKP+C+ C+I++LC+ ++
Sbjct: 219 EFMQHAHHWLILHGRYTCLARKPRCEVCLIADLCRWPEK 257
>gi|171779666|ref|ZP_02920622.1| hypothetical protein STRINF_01503 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281768|gb|EDT47202.1| hypothetical protein STRINF_01503 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 216
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 77/206 (37%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L++I + +P +GEL + F L++AV+LSAQ+TD VNK T +L++ +
Sbjct: 5 RERLKKILAIIGDMYPEARGELEWETPFQLLIAVILSAQTTDKAVNKVTPNLWKHYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ +RTIG+Y+ K+ NII + +++ +FD ++P+T + L LPG+GRK A
Sbjct: 65 DLAKANLVDVEECLRTIGLYKNKARNIIKTARVILQDFDGQVPKTHKELETLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +GIP+I VDTH+ RI+ R+ + AP ++E+ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVKEIEEDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C C + CK K
Sbjct: 185 FGRYHCLAKKPKCDICPVQAYCKYYK 210
>gi|227494411|ref|ZP_03924727.1| endonuclease III [Actinomyces coleocanis DSM 15436]
gi|226832145|gb|EEH64528.1| endonuclease III [Actinomyces coleocanis DSM 15436]
Length = 226
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 114/202 (56%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ E+ + + +P+ K L Y N F L+VA +LSAQ+TDV VN T LF TP +
Sbjct: 19 ETAPEVVEVLAQTYPNAKCALDYRNPFELLVATVLSAQTTDVRVNTVTPQLFAKYPTPFE 78
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M L + R +G K++ + LS L+ E+ ++P E L +LPG+GRK A+
Sbjct: 79 MANADHADLASITRVLGFQNKRATQLQELSQALVAEYAGEVPANREALQKLPGVGRKTAH 138
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFGIP I VDTH+ R++ R+G + KTP +E+ + +++P + L+ HG
Sbjct: 139 VVLGNAFGIPAITVDTHVGRVTTRLGWSQAKTPLAIEKDIAKLLPGYDWTLLCHRLIEHG 198
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
R +C ARKP C C + LC
Sbjct: 199 RAICDARKPLCGQCPLQQLCPA 220
>gi|83859045|ref|ZP_00952566.1| probable endonuclease III protein [Oceanicaulis alexandrii
HTCC2633]
gi|83852492|gb|EAP90345.1| probable endonuclease III protein [Oceanicaulis alexandrii
HTCC2633]
Length = 230
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 113/208 (54%), Positives = 159/208 (76%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EE++ + P P+ EL Y N +TL+VAV LSAQ+TDV VNKAT LF++ADT
Sbjct: 19 LNREQAEELYARLAEDRPEPQTELNYSNPYTLVVAVALSAQATDVGVNKATDKLFKVADT 78
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KMLA+GE ++ +I+TIG++R K++N+I+LS ++++EFD ++PQT + L RLPG+GRK
Sbjct: 79 PEKMLALGEDGVREHIKTIGLFRNKAKNVIALSQMILDEFDGEVPQTRDELVRLPGVGRK 138
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG TI VDTHIFR+ NR LAPGKTP++VE L +I PP++ AH+WL+
Sbjct: 139 TANVVLNEAFGQHTIAVDTHIFRVGNRTKLAPGKTPDEVEARLEQITPPQYLKGAHHWLI 198
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C I+++CK +
Sbjct: 199 LHGRYVCKARKPECWRCAIADICKFKDK 226
>gi|319638677|ref|ZP_07993437.1| endonuclease III [Neisseria mucosa C102]
gi|317400061|gb|EFV80722.1| endonuclease III [Neisseria mucosa C102]
Length = 209
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQIRQEIFERFRAANPHPTTELNFSSPFELLIAVLLSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR++NR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVANRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQC C+I++LC+
Sbjct: 181 LHGRYTCKALKPQCSKCLINDLCEY 205
>gi|114047401|ref|YP_737951.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Shewanella sp. MR-7]
gi|113888843|gb|ABI42894.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Shewanella sp. MR-7]
Length = 213
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRENNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|261855674|ref|YP_003262957.1| endonuclease III [Halothiobacillus neapolitanus c2]
gi|261836143|gb|ACX95910.1| endonuclease III [Halothiobacillus neapolitanus c2]
Length = 235
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 93/208 (44%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+F S + P+P EL + N F L++AV+LSAQSTDV VNK T+ L+ +A+T
Sbjct: 1 MNKNTRRLLFERLSAQRPNPTTELLFDNGFELLIAVMLSAQSTDVAVNKVTRRLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE++L++Y++T+G+YR K+ N+++ IL+ ++ + +P+ L LPG+GRK
Sbjct: 61 PEALLTLGEERLESYLKTLGLYRAKTRNVLATCQILLEKYASAVPRDRAALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ F P + VDTHIFR++NR GLAPGKT VE++L++ +P ++ +AH+WL+
Sbjct: 121 TANVVLNTLFREPVMAVDTHIFRVANRTGLAPGKTVLAVEKALMKHVPKEYLIDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKARKP C +C++ +LC ++
Sbjct: 181 LHGRYTCKARKPDCGACVVCDLCDYRQK 208
>gi|226330222|ref|ZP_03805740.1| hypothetical protein PROPEN_04135 [Proteus penneri ATCC 35198]
gi|225201017|gb|EEG83371.1| hypothetical protein PROPEN_04135 [Proteus penneri ATCC 35198]
Length = 212
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQAKRIEILTRLRDNNPQPTTELKFDSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+Y K+EN+I IL+++ ++++P+ E L LPG+GRK
Sbjct: 61 PQAILNLGVDGLKEYIKTIGLYNTKAENVIKTCQILVDKHNSEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR G APGK N+VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVNEVEQKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|295096023|emb|CBK85113.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I + P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRIAILTRLRDENPHPTTELNFNSPFELLIAVLLSAQATDVSVNKATALLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + +++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEEVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|94990298|ref|YP_598398.1| endonuclease III [Streptococcus pyogenes MGAS10270]
gi|94543806|gb|ABF33854.1| Endonuclease III [Streptococcus pyogenes MGAS10270]
Length = 218
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L +I + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKILTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAEVSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|262368736|ref|ZP_06062065.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
johnsonii SH046]
gi|262316414|gb|EEY97452.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
johnsonii SH046]
Length = 236
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/203 (49%), Positives = 142/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + P+PK EL Y + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 12 MTKKQIQIFFERLRAQRPNPKTELNYSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 71
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G L+ YI+TIG+Y K+EN+I ILI + ++ +P L LPG+GRK
Sbjct: 72 PETIYALGVDGLKTYIKTIGLYNAKAENVIKACKILIEKHNSIVPNNRADLEALPGVGRK 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + ++H+WL+
Sbjct: 132 TANVVLNTAFGQPTMAVDTHIFRLGNRTGLAVGKNVLEVEHRLVKVIPKEFIVDSHHWLI 191
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C CI+S++C
Sbjct: 192 LHGRYCCIARKPKCHECIVSDVC 214
>gi|307130987|ref|YP_003883003.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Dickeya dadantii 3937]
gi|306528516|gb|ADM98446.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Dickeya dadantii 3937]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L+++VLLSAQ+TDV+VNKAT+ L+ +A+T
Sbjct: 1 MNKEKRIAILSRLRDNNPHPTTELKFSSPFELLISVLLSAQATDVSVNKATEKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G +++YI+TIG++ K+ENII IL+++ ++P+ L LPG+GRK
Sbjct: 61 PQGMLDLGVDGVKSYIKTIGLFNGKAENIIKTCRILLDQHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGKT +VE+ LL+ +P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKTVEQVEEKLLKYVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGACLIEDLCEYKEK 208
>gi|296102661|ref|YP_003612807.1| endonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295057120|gb|ADF61858.1| endonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRIAILTRLRDANPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATALLYPMANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ ML +G + +++YI+TIG++ K+EN+I IL+ ++P+ E L LPG+GRK
Sbjct: 61 PKAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLERHGGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVANRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|222479385|ref|YP_002565622.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
gi|222452287|gb|ACM56552.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
Length = 227
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++EE+ ++P L Y N L++AV+LSAQ TD VNK LFE +TP
Sbjct: 8 REEQVEEVLDRLYEEYPDSTISLNYSNRLELLIAVILSAQCTDERVNKVCADLFETYETP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +++L I +I Y K++ I S + + D ++P T+ LT L G+GRK
Sbjct: 68 EDYANAPQEELAEAINSITYYNNKAKYIRSACADIAEQHDGEVPDTMSELTELAGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ RI+ R+ + ++P K+EQ LL ++P + + ++
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRITRRLAITEEESPKKIEQDLLDVVPEEDWQQFTHLMI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C A P C C+++++C K
Sbjct: 188 DHGRATCTAINPDCGDCVLADVCPSEK 214
>gi|239502944|ref|ZP_04662254.1| EndoIII-related endonuclease [Acinetobacter baumannii AB900]
Length = 230
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 TEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C AR+P+C C+++++C
Sbjct: 186 LHGRYCCIARRPKCSECVVADVC 208
>gi|82523847|emb|CAI78590.1| Predicted EndoIII-related endonuclease [uncultured candidate
division OP8 bacterium]
Length = 216
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 110/208 (52%), Positives = 157/208 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++ F P PK EL + N +TL+VAV LSAQ+TDV VN+AT+ LF+IADT
Sbjct: 7 MPKKDVHTFFARLRADNPEPKSELNWTNPYTLVVAVALSAQATDVGVNRATEKLFKIADT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKMLA+G + L+ +I+TIG++ K++N+I+LS +LI+EF ++P+ E L RLPG+GRK
Sbjct: 67 PQKMLALGLEGLKQHIKTIGLFNTKAKNVIALSQLLIDEFGGEVPRVREALERLPGVGRK 126
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++ +G PT+ VDTHIFR+SNR G+APGKTP VE+ LL+ +P + +AH+WL+
Sbjct: 127 TANVVLNVCWGEPTMAVDTHIFRVSNRTGIAPGKTPLAVEKGLLKAVPAEFMVHAHHWLI 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C +S++C+ ++
Sbjct: 187 LHGRYVCKARKPECGICGVSDVCRYKEK 214
>gi|117920618|ref|YP_869810.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella sp. ANA-3]
gi|117612950|gb|ABK48404.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella sp. ANA-3]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/205 (46%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRENNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIKKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C SCII +LC+
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEY 205
>gi|260597793|ref|YP_003210364.1| endonuclease III [Cronobacter turicensis z3032]
gi|260216970|emb|CBA30609.1| Endonuclease III [Cronobacter turicensis z3032]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL++ + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQAKRIEILTRLRENNPHPTTELHFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G ++ YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PEAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAPGKNVEAVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYAEK 208
>gi|83313269|ref|YP_423533.1| EndoIII-related endonuclease [Magnetospirillum magneticum AMB-1]
gi|82948110|dbj|BAE52974.1| Predicted EndoIII-related endonuclease [Magnetospirillum magneticum
AMB-1]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 104/203 (51%), Positives = 143/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TPK+ + + L + + P PK +L Y + +TL+VAV+LSAQ+TD VNKAT+ LF +T
Sbjct: 1 MTPKQADRFYALLAERNPEPKSDLEYADPYTLLVAVVLSAQATDAGVNKATRPLFARVNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ M+ +GE+ L IRTIG+Y+ K++N+I LS L++ ++P L LPG+GRK
Sbjct: 61 PQAMVELGEEGLVQSIRTIGLYKTKAKNVIELSRRLLSLHGGQVPHDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTH FR++NR GLAPGKT VEQ L++ P K +AH+WL+
Sbjct: 121 TANVVLNIAFGEPTIAVDTHCFRVANRTGLAPGKTVEAVEQGLMKATPAKWLQHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY CKARKP C +C++ LC
Sbjct: 181 LHGRYTCKARKPDCAACVVRELC 203
>gi|209695333|ref|YP_002263262.1| endonuclease III [Aliivibrio salmonicida LFI1238]
gi|208009285|emb|CAQ79551.1| endonuclease III [Aliivibrio salmonicida LFI1238]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 147/209 (70%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K L EI + P P+ EL + + F L++AVLLSAQ+TDV+VNKAT+ L+ IA+
Sbjct: 1 MNNVKRL-EILTRLRAENPKPETELEWSSPFELLIAVLLSAQATDVSVNKATRKLYPIAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG++ K+EN+I +LI D+ IP+ + L LPG+G
Sbjct: 60 TPQAILDLGVDGLKTYIKTIGLFNTKAENVIKTCRMLIELHDSVIPEDQDALEALPGVGH 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHI+R+SNR LA GKT N VE+ LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVNDVEKKLLKVVPKEFKLDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCEFSEK 208
>gi|126090188|ref|YP_001041669.1| hypothetical protein Sbal_4551 [Shewanella baltica OS155]
gi|126174481|ref|YP_001050630.1| endonuclease III [Shewanella baltica OS155]
gi|125997686|gb|ABN61761.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella baltica OS155]
gi|125999844|gb|ABN63914.1| hypothetical protein Sbal_4551 [Shewanella baltica OS155]
Length = 213
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVDGLKQYIKTIGLYNNKAVNVIKACKILIEKYNGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEDKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|134300170|ref|YP_001113666.1| endonuclease III [Desulfotomaculum reducens MI-1]
gi|134052870|gb|ABO50841.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfotomaculum
reducens MI-1]
Length = 211
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 82/207 (39%), Positives = 133/207 (64%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++I + +P+ +L Y F L+VAV+LSAQSTD VNK T+ LF+ +T
Sbjct: 2 EDRIQQILTRLAETYPNATTDLKYTTPFELLVAVILSAQSTDAQVNKITEKLFQKYNTAA 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ +I+ G++R KS+ ++ S IL+ +++ ++PQ E L +LPG+GRK A
Sbjct: 62 SFAQLTPAEVAEHIKGCGLFRNKSKFLVETSRILVEKYNGQVPQAREELEKLPGVGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+L +AFG T VDTH+ R+++R+GLA GKTP +VE+ L +I+PP+ H+W++ H
Sbjct: 122 NVVLGVAFGQNTFPVDTHVHRLAHRLGLASGKTPEQVEKELCQIMPPELWQPCHHWIIQH 181
Query: 202 GRYVCKARKPQCQSCIISNLCK-RIKQ 227
GR +C AR P+C C + +LC +K+
Sbjct: 182 GRRICDARNPRCGQCCLIDLCPEALKK 208
>gi|184157306|ref|YP_001845645.1| EndoIII-related endonuclease [Acinetobacter baumannii ACICU]
gi|332873433|ref|ZP_08441386.1| endonuclease III [Acinetobacter baumannii 6014059]
gi|183208900|gb|ACC56298.1| predicted EndoIII-related endonuclease [Acinetobacter baumannii
ACICU]
gi|322507191|gb|ADX02645.1| Endonuclease III DNA glycosylase/apyrimidinic AP lyase
[Acinetobacter baumannii 1656-2]
gi|323517169|gb|ADX91550.1| EndoIII-related endonuclease [Acinetobacter baumannii TCDC-AB0715]
gi|332738379|gb|EGJ69253.1| endonuclease III [Acinetobacter baumannii 6014059]
Length = 230
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C AR+P+C C+++++C
Sbjct: 186 LHGRYCCIARRPKCSECVVADVC 208
>gi|320546504|ref|ZP_08040819.1| endonuclease III [Streptococcus equinus ATCC 9812]
gi|320448889|gb|EFW89617.1| endonuclease III [Streptococcus equinus ATCC 9812]
Length = 216
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L+++ + +P + EL + F L+VAV+LSAQ+TD VNK T +L++ +
Sbjct: 5 RERLKKVLEIIGDMYPDARCELDWQTPFQLLVAVILSAQTTDKAVNKVTPNLWKKYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ +++ +R IG+Y+ K++NII + ++ +FD K+P+T + L LPG+GRK A
Sbjct: 65 DLAMANLSDVEDCLRAIGLYKNKAKNIIKTARAILQDFDGKVPKTHKELETLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P+I VDTH+ RI+ R+ + AP ++EQ L++ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPSIAVDTHVSRIAKRLNISAPDADVKEIEQDLMKKIPKKDWILTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY C A+KP C C + CK K+
Sbjct: 185 FGRYHCLAKKPNCDICPVQTYCKFYKE 211
>gi|255319167|ref|ZP_05360385.1| endonuclease III [Acinetobacter radioresistens SK82]
gi|262379299|ref|ZP_06072455.1| endonuclease III [Acinetobacter radioresistens SH164]
gi|255303813|gb|EET83012.1| endonuclease III [Acinetobacter radioresistens SK82]
gi|262298756|gb|EEY86669.1| endonuclease III [Acinetobacter radioresistens SH164]
Length = 238
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 103/214 (48%), Positives = 148/214 (69%), Gaps = 1/214 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
S + P+ + K++ F + P P EL + + F L+VAV LSAQ+TDV+VNK
Sbjct: 2 STVTSKPVKKM-NKKQVYTFFERLRQQRPHPTTELRFSSPFELLVAVTLSAQATDVSVNK 60
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF +A+TP+ + A+G + L+ YI+TIG+Y K+EN+I ILI + + ++P+T
Sbjct: 61 ATDKLFPVANTPEAIYALGVEGLKAYIKTIGLYNAKAENVIKACKILIEQHNGQVPETRA 120
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLAPGK +VEQ LL++IP
Sbjct: 121 ELEALPGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAPGKNVLEVEQQLLKVIPK 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ +AH+WL+LHGRY C ARKP+C C+++++C
Sbjct: 181 EFIVDAHHWLILHGRYTCIARKPKCFECVVADVC 214
>gi|294678009|ref|YP_003578624.1| endonuclease III [Rhodobacter capsulatus SB 1003]
gi|294476829|gb|ADE86217.1| endonuclease III [Rhodobacter capsulatus SB 1003]
Length = 214
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 106/212 (50%), Positives = 156/212 (73%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+G ++E+F F+ P P+GEL +VN FTL+VAV LSAQ+TDV VNKAT+ L+
Sbjct: 1 MGAQLDYPTMKEVFRRFAEANPHPEGELEHVNAFTLLVAVALSAQATDVGVNKATRALWP 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ADTPQKMLA+GE+ L ++I++IG+YR K++N+I+LS +L+ FD ++P + L LPG
Sbjct: 61 VADTPQKMLALGEEGLTHHIKSIGLYRTKAKNVIALSRLLVERFDGQVPSSRAALVSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M +G P VDTHIFR+ NR G+ PGK + VE+++ +P + Q +AH
Sbjct: 121 VGRKTANVVLNMGWGHPAQAVDTHIFRVGNRSGICPGKDVDAVERAIEDNVPVEFQRHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+WL+LHGRY+C ARKP+C C+I +LC+ ++
Sbjct: 181 HWLILHGRYICTARKPRCADCLIRDLCRYEEK 212
>gi|217973450|ref|YP_002358201.1| endonuclease III [Shewanella baltica OS223]
gi|304408657|ref|ZP_07390278.1| endonuclease III [Shewanella baltica OS183]
gi|307305486|ref|ZP_07585234.1| endonuclease III [Shewanella baltica BA175]
gi|217498585|gb|ACK46778.1| endonuclease III [Shewanella baltica OS223]
gi|304352478|gb|EFM16875.1| endonuclease III [Shewanella baltica OS183]
gi|306911789|gb|EFN42214.1| endonuclease III [Shewanella baltica BA175]
Length = 213
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AQSIYALGVDGLKQYIKTIGLYNNKAINVIKACEILIEKYNGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEDKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|75674404|ref|YP_316825.1| endonuclease III/Nth [Nitrobacter winogradskyi Nb-255]
gi|74419274|gb|ABA03473.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter winogradskyi
Nb-255]
Length = 252
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 117/223 (52%), Positives = 162/223 (72%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
K + P +TP E+ E F F P PKGEL ++N FTL+VAV+LSAQ+TD
Sbjct: 24 KPARGPAELPPSLRPWTPAEVHEAFTRFRRANPEPKGELEHLNPFTLLVAVVLSAQATDA 83
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VNKAT+ LF +ADTP +MLA+GE+K+++YI+TIG+YR K+ NII+LS L+ EFD +P
Sbjct: 84 GVNKATRALFAVADTPARMLALGEEKVRDYIKTIGLYRTKARNIIALSEKLLAEFDGAVP 143
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
+ G+ LPG GRK ANV+L+MAFG T+ VDTH+FR++NR G+APGKTP +VE L R
Sbjct: 144 PSRAGIESLPGAGRKTANVVLNMAFGERTMAVDTHVFRVANRTGMAPGKTPLEVELGLER 203
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+IP + +AH+WL+LHGRY C AR P+C+ C+I++LC+ ++
Sbjct: 204 VIPNQFMLHAHHWLILHGRYTCLARSPRCKVCLINDLCRWPEK 246
>gi|304317449|ref|YP_003852594.1| endonuclease III [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778951|gb|ADL69510.1| endonuclease III [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 214
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 123/206 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E EI + +P K L++ N F L++A +LSAQ TD VN T+ LF+ +P
Sbjct: 4 TKDEALEIIEILKKTYPDAKPGLHFNNAFELLIATILSAQCTDKRVNIVTEKLFKKYKSP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + + I+ G+YR KS+NII+ IL ++ +P +E L LPG+GRK
Sbjct: 64 ADLKDVDPRDFEEEIKDCGLYRNKSKNIINTCKILCEKYGGNVPDEMEKLMELPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV++S AF I VDTH+FR+SNRIGLA K E+ L+ I+P +H+ L+
Sbjct: 124 ANVVISNAFKKDAIAVDTHVFRVSNRIGLADTNDVTKTEEQLMDILPRNLWSLSHHLLIY 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C+++++C+ K
Sbjct: 184 HGRNICTARKPKCDICLVNHICQFYK 209
>gi|90579154|ref|ZP_01234964.1| Putative endonuclease III [Vibrio angustum S14]
gi|90439987|gb|EAS65168.1| Putative endonuclease III [Vibrio angustum S14]
Length = 207
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 95/205 (46%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I + P P+ EL++ F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNNQKRVQ-ILERLRAENPHPETELHWSTPFELLIAVLLSAQATDVSVNKATDKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + +G ++ YI+TIG++ K+EN+I IL+++ + +IP+ E L LPG+GR
Sbjct: 60 TPQAIYDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDKHNGEIPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K NV+L+ AFG PTI VDTHIFR+ NR A GK ++VE+ LL+++P + + + H+WL
Sbjct: 120 KTENVVLNTAFGWPTIAVDTHIFRVCNRTKFAMGKNVDQVEEKLLKVVPKEFKVDVHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+LHGRY C ARKP+C SC+I +LC+
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEDLCE 204
>gi|322412006|gb|EFY02914.1| endonuclease III [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 218
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/206 (36%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L ++ L + +P KGEL + F L++AV+LSAQ+TD VNK T L+ +
Sbjct: 5 KERLRKVLALIAEMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPALWARYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++N +RTIG+Y+ K++NII + ++ F ++P+T + L LPG+GRK A
Sbjct: 65 DLASANVTDVENCLRTIGLYKNKAKNIIKTAQAMLTNFGGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R++ R+ + AP ++EQ L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVSRVAKRLNVSAPNADVTEIEQDLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+ P+C C + CK K
Sbjct: 185 FGRYHCLAKNPKCAICPVQTYCKYYK 210
>gi|262197117|ref|YP_003268326.1| endonuclease III [Haliangium ochraceum DSM 14365]
gi|262080464|gb|ACY16433.1| endonuclease III [Haliangium ochraceum DSM 14365]
Length = 234
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M +S + + S L PK E + + WP EL + + + L+VA +L+AQ
Sbjct: 1 MAGKARSQTSKRGSKPRLLSKPKR-EALLARLAETWPEAVVELDHESAYELLVATILAAQ 59
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
STD VN T LF + + ++L+ IR+ G YR K+++++ ++ L+ D
Sbjct: 60 STDKRVNLVTPALFARYPHARDLAEADPEELEELIRSTGFYRMKAKHLLGMARALVAHHD 119
Query: 121 NKIPQTLEGLTRLPGIGRKGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P+T+ L LPG+ RK ANV+ I VDTH+ R++ R+GL+ +K+E
Sbjct: 120 GQVPRTMRELVALPGVARKTANVVLGCFFGVASGIVVDTHVSRLARRLGLSAETQNDKIE 179
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ IP + + L+ HGR VC ARKP C+ C ++ LC
Sbjct: 180 RDLMDAIPRAQWNDVAHQLIWHGRRVCTARKPACEECALAPLCPS 224
>gi|313679175|ref|YP_004056914.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Oceanithermus profundus DSM 14977]
gi|313151890|gb|ADR35741.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Oceanithermus profundus DSM 14977]
Length = 223
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 127/217 (58%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + + I +P + EL + N F L+VA +LSAQ+TD +V
Sbjct: 2 APAKLRCPRESKTKKRERALRILKKLEAAYPQARTELRHENPFQLLVATVLSAQATDKSV 61
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N+AT LF TP+ + A +++ +IR IG++R K+ N+++L+ L+ E ++P+
Sbjct: 62 NEATPALFARFPTPEALAAATPGEVEPFIRRIGLFRTKARNLVALARKLVEEHGGEVPRD 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
E L LPG+G K A V+L AFG+P I VDTH+ R+++R+ L+ +TP K+ L +
Sbjct: 122 KEALMALPGVGWKTATVVLGAAFGVPGIAVDTHLARLAHRLCLSRARTPEKIGAELEALF 181
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
P + H+ L+LHGRYVC ARKP+C +C++++ C
Sbjct: 182 PREKWVFVHHALILHGRYVCTARKPKCDACVLADDCP 218
>gi|157964887|ref|YP_001499711.1| endonuclease III [Rickettsia massiliae MTU5]
gi|157844663|gb|ABV85164.1| Endonuclease III [Rickettsia massiliae MTU5]
Length = 210
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 145/201 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD+ VN ATK LF DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYRNDFTLLVAVILSAQATDILVNLATKSLFATYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKELIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++ RIGLA G TP VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVAKRIGLAKGGTPEIVEKELLQIIDKKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|329298915|ref|ZP_08256251.1| endonuclease III [Plautia stali symbiont]
Length = 210
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRLQILTRLRDANPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G + ++ YI+TIG++ K+EN+I + IL+ + +P+ L LPG+GRK
Sbjct: 61 PAAMLALGVEGVKEYIKTIGLFNSKAENVIKICRILLEQHGGVVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P I VDTHIFR+SNR APGK +VEQ LL+++P + + H+WL+
Sbjct: 121 TANVVLNTAFGWPIIAVDTHIFRVSNRTRFAPGKNVEEVEQKLLKVVPADFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFTEK 208
>gi|113970407|ref|YP_734200.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella sp. MR-4]
gi|113885091|gb|ABI39143.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella sp. MR-4]
Length = 213
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRENNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G + L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVEGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|148251819|ref|YP_001236404.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Bradyrhizobium sp. BTAi1]
gi|146403992|gb|ABQ32498.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Bradyrhizobium sp. BTAi1]
Length = 274
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 162/208 (77%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+TP E+ E F F+ P PKGEL ++N +TL+VAV+LSAQ+TD VNKAT+ LF +ADT
Sbjct: 65 WTPAEIREAFSRFAASNPEPKGELEHLNPYTLLVAVVLSAQATDAGVNKATRPLFAVADT 124
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKM+A+GE++L++YI+TIG+YR K++N+I+LS LI+EF ++P+T L LPG GRK
Sbjct: 125 PQKMIALGEEQLRDYIKTIGLYRTKAKNVIALSQKLISEFGGEVPRTRAELESLPGAGRK 184
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+MAFG T+ VDTH+FR+ NR GLAPGKTP +VE L ++IP + +AH+WL+
Sbjct: 185 TANVVLNMAFGEHTMAVDTHVFRVGNRTGLAPGKTPLEVELGLEKVIPAEFMLHAHHWLI 244
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C+ C+I +LC+ ++
Sbjct: 245 LHGRYTCLARKPRCELCLIKDLCRWPEK 272
>gi|297588394|ref|ZP_06947037.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
gi|297573767|gb|EFH92488.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
Length = 208
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 134/206 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +++ +I +P+ K L + F L++A +LSAQ TDV VNK T LF+ +T
Sbjct: 1 MSYEKINKILDDLDSLYPNAKAGLDFTTPFELLIATILSAQCTDVRVNKVTSVLFKEHNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G L YI++ G+Y+ KS+NII+ ++L +++D+K+P ++ L +LPG+GRK
Sbjct: 61 PKTILDLGVDGLAKYIKSCGLYKTKSKNIINTCNVLYHDYDSKVPDNIDELMKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++S AFG P I VDTH+FR++NRIG+ K E +L++ IP +H+ +
Sbjct: 121 TANVVVSNAFGTPAIAVDTHVFRVTNRIGIVNEKDVLSTEMALMQEIPRDRWSKSHHLFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKAR P+C+ CI+++ CK
Sbjct: 181 WHGRNLCKARNPRCEECILNDRCKFY 206
>gi|114329092|ref|YP_746249.1| endonuclease III [Granulibacter bethesdensis CGDNIH1]
gi|114317266|gb|ABI63326.1| endonuclease III [Granulibacter bethesdensis CGDNIH1]
Length = 233
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 145/223 (65%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+S+ S S T ++ + P PK EL Y ++FTL+VAV+LSAQ+
Sbjct: 1 MSTSSSLSAADPVSASPRMTRAQVIGFLDALAKANPDPKSELIYTSNFTLLVAVVLSAQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VNKAT+ LFE A P M+A+GE+ + +IR+IG+++ K+ N+ +LS L++ F
Sbjct: 61 TDVAVNKATRSLFEQAPDPASMVALGEEGIARHIRSIGLWQAKARNVAALSQQLLDRFGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E L LPG+GRK ANV+LS+AF PT+ VDTH+FR+ NR G+APGKT VE +
Sbjct: 121 EVPADREALESLPGVGRKTANVVLSVAFDQPTMAVDTHVFRLGNRTGIAPGKTTRMVEDA 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ IP AH+WL+LHGRYVCKAR+P+C C+ + C+
Sbjct: 181 LVARIPADRLGMAHHWLILHGRYVCKARRPECWRCVGAEWCRY 223
>gi|160872117|ref|ZP_02062249.1| endonuclease III [Rickettsiella grylli]
gi|159120916|gb|EDP46254.1| endonuclease III [Rickettsiella grylli]
Length = 213
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ + IF F P P EL Y + F L++AV+LSAQ+TD +VN AT+ LF A++
Sbjct: 1 MNQKKRDTIFQRFQTHNPHPTTELNYTSPFELLIAVILSAQATDKSVNNATQSLFSKANS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K++A+G L+ YI+TIG+Y K++NI+ IL+ + +P E L LPG+GRK
Sbjct: 61 PKKIVALGLSGLKKYIKTIGLYNTKAKNILKTCKILLANYQGHVPHHREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ F PT+ VDTHIFR+ NR LA GKTP VE+ LL+++P K+ NAH+WLV
Sbjct: 121 TANVILNTIFHQPTVAVDTHIFRVCNRTSLATGKTPLAVEKKLLQVVPQKYLKNAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+C ARKP+C CII +LC+
Sbjct: 181 LHGRYICLARKPKCPICIICDLCEY 205
>gi|241759857|ref|ZP_04757957.1| endonuclease III [Neisseria flavescens SK114]
gi|241319865|gb|EER56261.1| endonuclease III [Neisseria flavescens SK114]
Length = 209
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQIRQEIFERFRAANPHPTTELNFSSPFELLIAVLLSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQC C+I++LC+
Sbjct: 181 LHGRYTCKALKPQCSKCLINDLCEY 205
>gi|296135973|ref|YP_003643215.1| endonuclease III [Thiomonas intermedia K12]
gi|295796095|gb|ADG30885.1| endonuclease III [Thiomonas intermedia K12]
Length = 213
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 109/207 (52%), Positives = 155/207 (74%), Gaps = 1/207 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P +++ +F F+ P P+ EL Y F L+VAV LSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MKPAQIQTLFERFAAANPEPRTELEYRTPFELLVAVALSAQATDVSVNKATRPLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE +L+ IRTIG+Y+ K++NII+ ILI+++ ++P++ E L LPG+GRK
Sbjct: 61 PQALLDLGEDRLREAIRTIGLYKTKAKNIIATCRILIDQYGGEVPRSREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG TI VDTHIFR++NR+GLA GKTP VE L ++IPP+ + +AH+WL+
Sbjct: 121 TANVVLNVAFGQDTIAVDTHIFRVANRLGLAKGKTPLAVETQLEKVIPPQFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGRYVCKARKP+C C +++LC K
Sbjct: 181 LHGRYVCKARKPECWRCGVADLC-AFK 206
>gi|168185524|ref|ZP_02620159.1| endonuclease III [Clostridium botulinum C str. Eklund]
gi|169296265|gb|EDS78398.1| endonuclease III [Clostridium botulinum C str. Eklund]
Length = 208
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 139/206 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +E + + + K L + N + L++A +LSAQ TD VN TK LF+ ++
Sbjct: 1 MKKENIENVIKVLEHTYKGAKCGLNFKNPYELLIATMLSAQCTDERVNVVTKELFKEYNS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M+ + ++++ I++ G+Y+ KS+NI++ S+ ++N+F+ K+P+T+E L LPG+GRK
Sbjct: 61 AEAMVTLTQEEIGEKIKSCGLYKNKSKNILAASYDILNKFNGKVPRTMEELVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AF +P I VDTH+FR+SNRIG+A GK + VE+ L++ IP + + H++L+
Sbjct: 121 TANVVLSNAFKVPAIAVDTHVFRVSNRIGIAKGKNVDIVEKELMKSIPKEKWSDTHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKARKPQC++C I+ C+
Sbjct: 181 WHGRKICKARKPQCENCPIAPYCEYF 206
>gi|118444307|ref|YP_877476.1| endonuclease III [Clostridium novyi NT]
gi|118134763|gb|ABK61807.1| endonuclease III [Clostridium novyi NT]
Length = 207
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 137/206 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +E + + + K L + N + L++A +LSAQ TD VN T+ LF+ ++
Sbjct: 1 MKKENIENVINVLEHTYKGAKCGLNFKNPYELLIATMLSAQCTDERVNVVTEELFKKYNS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M+ + ++++ I++ G+Y+ KS+NI++ S ++N+F+ K+P T+E L LPG+GRK
Sbjct: 61 AEAMVTLTQEEIGEKIKSCGLYKNKSKNILAASQDILNKFNGKVPNTMEDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFGIP I VDTH+FR+SNRIG+A GK + VE+ L++ IP + + H++L+
Sbjct: 121 TANVVLSNAFGIPAIAVDTHVFRVSNRIGIAKGKNVDIVEKELMKNIPKEKWSDTHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKARKPQC C ++ C+ I
Sbjct: 181 WHGRKICKARKPQCDQCPVAPYCEYI 206
>gi|149280018|ref|ZP_01886143.1| endonuclease III [Pedobacter sp. BAL39]
gi|149229215|gb|EDM34609.1| endonuclease III [Pedobacter sp. BAL39]
Length = 220
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 137/209 (65%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F+ K P + EL+Y N F L+VAV+LSAQ TD +N+ T LF+
Sbjct: 1 MLKKERYQAFVAHFAAKQPDAETELHYNNPFQLLVAVILSAQCTDKRINQVTPALFQRFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + + +YIR++ K+++++ ++++L+++F+N++P ++ L ++PG+GR
Sbjct: 61 NAKALAEVTPDIVFDYIRSVSYPNNKAKHLVGMANMLLHDFNNEVPSDVKELQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI S+ + P + VDTH++R++ RIGL+ GKTP VE+ L++ +P + AH+WL
Sbjct: 121 KTANVIASVIYNAPAMAVDTHVYRVARRIGLSTGKTPLAVEKDLVKNLPQHTIHIAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRYVC AR P+C C I+N+CK +Q
Sbjct: 181 ILHGRYVCVARSPKCNVCEITNICKYFQQ 209
>gi|284048816|ref|YP_003399155.1| endonuclease III [Acidaminococcus fermentans DSM 20731]
gi|283953037|gb|ADB47840.1| endonuclease III [Acidaminococcus fermentans DSM 20731]
Length = 209
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 131/206 (63%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + L+Y F L+VAV+LSAQ TD VNK T LF D
Sbjct: 1 MRKKERVAAILTKLEETYRGQGTALHYRTPFELLVAVVLSAQCTDERVNKVTARLFPEYD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+K+ + +++++ IR G++R K+ NI+ L L+ EF +++PQ ++ L LPG+GR
Sbjct: 61 TPEKLGNLTQEQMEEKIRDCGLFRSKARNILGLCRKLVEEFHSEVPQDMKSLLSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+LS+AFG P I VDTH+FR+++R+GL+ G P VEQ L+++IP AH+W
Sbjct: 121 KTADVMLSVAFGQPAIAVDTHVFRVAHRLGLSQGADPLAVEQDLMKLIPRAQWGEAHHWF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR +CKARKP+C +C + +LC
Sbjct: 181 IWHGRKLCKARKPECTACPVVDLCPS 206
>gi|256831678|ref|YP_003160405.1| endonuclease III [Jonesia denitrificans DSM 20603]
gi|256685209|gb|ACV08102.1| endonuclease III [Jonesia denitrificans DSM 20603]
Length = 246
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
PLG + ++ P + EL + + F L++A +LSAQ+TDV VN T
Sbjct: 7 RPPLGLVR---RARKLGRALEGLHPDARCELNFRSPFELLIATVLSAQTTDVRVNSVTGA 63
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF ++++ IR G +R K+ +++ + L+ ++P LE L
Sbjct: 64 LFARFPDALAFAEADVHEVEDLIRPTGFFRAKAASLVGIGAALVERHHGEVPGDLEELVT 123
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L AFG+P + VDTH+ R+ R + P VE + + P +
Sbjct: 124 LPGVGRKTANVVLGDAFGVPGVTVDTHVGRLVRRWQWTQSQDPVVVEHQVGALFPRREWT 183
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ HGR VC AR P C C +++LC
Sbjct: 184 MLSHRIIFHGRRVCHARTPACGVCPLASLCPS 215
>gi|118593676|ref|ZP_01551051.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:Endonuclease III, HhH:Endonuclease III/Nth
[Stappia aggregata IAM 12614]
gi|118433686|gb|EAV40348.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:Endonuclease III, HhH:Endonuclease III/Nth
[Stappia aggregata IAM 12614]
Length = 271
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 120/227 (52%), Positives = 166/227 (73%), Gaps = 2/227 (0%)
Query: 3 SSKKSDS--YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
+ KK+ S G YT E IF F P PKGEL YVN FTL+VAV+LSAQ
Sbjct: 22 TRKKAPSVDNPGKVLKRPRYTKAETFAIFQRFHADNPEPKGELDYVNAFTLLVAVVLSAQ 81
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TDV VN+ATKHLF+IADTP+KMLA+GE ++ I+TIG+Y+ K++N+I LS LI +
Sbjct: 82 ATDVGVNRATKHLFQIADTPEKMLALGEDLVREEIKTIGLYKNKAKNVILLSEKLIRDHG 141
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ E L LPG+GRK ANV+L++ FG PTI VDTH+FR+ NRIG+APGKTP VE+
Sbjct: 142 GEVPEDREALEALPGVGRKTANVVLNIFFGHPTIAVDTHLFRLGNRIGIAPGKTPLDVEK 201
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++P + +AH+WL+LHGRY+CKARKP+C+ C+I +LC+ ++
Sbjct: 202 AMEKVVPVEFALHAHHWLILHGRYICKARKPECRRCVIYDLCRSPEK 248
>gi|312113452|ref|YP_004011048.1| endonuclease III [Rhodomicrobium vannielii ATCC 17100]
gi|311218581|gb|ADP69949.1| endonuclease III [Rhodomicrobium vannielii ATCC 17100]
Length = 252
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 115/223 (51%), Positives = 162/223 (72%), Gaps = 2/223 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ + G++ L + +E+ E+F F+ P P+ EL YVN FTL+VAV+LSAQ+
Sbjct: 16 LTPATKEKRTGDT--SSLLSAEEIGELFSRFAAAMPDPRTELDYVNPFTLLVAVVLSAQA 73
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNKATK LF ADTP+KMLA+GE K+++ I+TIG++ K+ N+++LS L+ +
Sbjct: 74 TDAGVNKATKALFAKADTPEKMLALGEDKVRDAIKTIGLFNTKARNVVALSKALVETWGG 133
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+P+ + L LPG+GRK ANV+L++AFG PTI VDTHIFR++NR GLAPGKTP VE
Sbjct: 134 VVPKDRDALESLPGVGRKSANVVLNVAFGEPTIAVDTHIFRVANRTGLAPGKTPLAVELG 193
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L R++P + NAH+WL+LHGRYVCKARKP+C C+I++LC+
Sbjct: 194 LERVVPARFALNAHHWLILHGRYVCKARKPECWRCLIADLCRF 236
>gi|225077411|ref|ZP_03720610.1| hypothetical protein NEIFLAOT_02472 [Neisseria flavescens
NRL30031/H210]
gi|224951229|gb|EEG32438.1| hypothetical protein NEIFLAOT_02472 [Neisseria flavescens
NRL30031/H210]
Length = 209
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF IA+T
Sbjct: 1 MNKQIRQEIFERFRAANPHPTTELNFSSPFELLIAVLLSAQATDVGVNKATAKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQC C+I++LC+
Sbjct: 181 LHGRYTCKALKPQCSKCLINDLCEY 205
>gi|300723261|ref|YP_003712561.1| endonuclease III [Xenorhabdus nematophila ATCC 19061]
gi|297629778|emb|CBJ90386.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus
nematophila ATCC 19061]
Length = 210
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQQKRVEILTRLRDNNPHPTTELVFNSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+Y K+EN+I +L+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILNLGVDGLKGYIKTIGLYNTKAENVIKTCRLLLEKHQGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTQFAPGKNVDEVEKKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFEEK 208
>gi|83816451|ref|YP_446456.1| endonuclease III [Salinibacter ruber DSM 13855]
gi|83757845|gb|ABC45958.1| endonuclease III [Salinibacter ruber DSM 13855]
Length = 324
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 5/220 (2%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
SP+G + + + P EL Y + L+VAV+LSAQ TD VNKA
Sbjct: 37 PAHPSPVG---RSDRADVVLEELRERIDRPTTELQYDTPYQLLVAVILSAQCTDERVNKA 93
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF+ + + + YI++I K+ + ++ +++ FD K+P+T++
Sbjct: 94 TPDLFDAYPAVEALAEATPDDIHPYIQSITFPNNKAGYLARMARQVVDNFDGKVPETIDD 153
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIP 187
L L G+GRK A V+ +A + VDTH+FR++NRIGL TP KVEQ L R+IP
Sbjct: 154 LETLTGVGRKTARVVAQVAHDADALPVDTHVFRVANRIGLVKEDATTPKKVEQQLKRVIP 213
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
AH+ L+LHGRY C AR P C C I CK +
Sbjct: 214 KAEWGEAHHLLILHGRYTCTARSPDCHDCPIHEECKHYDR 253
>gi|15893072|ref|NP_360786.1| endonuclease III [Rickettsia conorii str. Malish 7]
gi|59797880|sp|Q92GH4|END3_RICCN RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|15620275|gb|AAL03687.1| endonuclease III [Rickettsia conorii str. Malish 7]
Length = 210
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 146/201 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TD++VN ATK LF DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDISVNLATKSLFATYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKALIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++NRIGLA G TP VE LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVANRIGLAKGDTPEIVENELLQIIDTKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C
Sbjct: 186 ICKARKPDCDICPIKEYCDYY 206
>gi|127513000|ref|YP_001094197.1| endonuclease III [Shewanella loihica PV-4]
gi|126638295|gb|ABO23938.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Shewanella loihica PV-4]
Length = 213
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I +F P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNTEKRRKILEIFRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + +G + L++YI+TIG+Y K+ N+I IL+ + ++P+ E L LPG+GRK
Sbjct: 61 AQAIYDLGVEGLKDYIKTIGLYNNKAINVIKACEILLEKHGGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR A GK ++VEQ +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVANRTKFAMGKNVDQVEQKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I C+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEEHCEFKEK 208
>gi|332883585|gb|EGK03866.1| endonuclease III [Dysgonomonas mossii DSM 22836]
Length = 225
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E + F P EL+Y + F L++AV+LSAQ TD VN T LFE
Sbjct: 14 MTKKERYERVIDWFDKNMPVVDTELHYDSPFHLLIAVILSAQCTDKRVNMVTPALFEAFP 73
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + YI++I K++N++ ++ ++ +F+ +IP TLE L +PG+GR
Sbjct: 74 TPEVLAVSSPDDVYEYIKSISYPNNKAKNLVGMAKKVMADFNGQIPDTLEELESIPGVGR 133
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L +AF P + VDTH+FR+SNRIGL K P + E+ L++ IP ++ AH+W
Sbjct: 134 KTANVMLIVAFNKPAMPVDTHVFRVSNRIGLTDNSKKPAQTERELIKYIPSRYLSKAHHW 193
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRYVC ARKP+C+ C ++ CK
Sbjct: 194 LILHGRYVCLARKPKCEECGLTPFCKYF 221
>gi|83590725|ref|YP_430734.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Moorella thermoacetica ATCC 39073]
gi|83573639|gb|ABC20191.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Moorella thermoacetica ATCC 39073]
Length = 233
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 126/206 (61%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +E I +L +P + L + N F L+VA +LSAQ+TD VNK T LF
Sbjct: 21 KVMQRDRVEAILHLLRAAYPGARSRLNFRNPFELLVAAILSAQTTDDQVNKVTGELFRRY 80
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ + A +++ I+++G+YR K+ ++++ L+ E+ ++P LE L RL G+G
Sbjct: 81 PTPEVLAAADPEEVAACIKSLGLYRTKAAHLVAACRTLVREYGGRVPDKLEDLLRLHGVG 140
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+LS AFG I VDTH+FR++NR+GLA + E+ L+ +PP + AH+
Sbjct: 141 RKVANVVLSNAFGRDVIAVDTHVFRVANRLGLARAGDVRETERQLMAALPPGSRGEAHHL 200
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
L+ HGR VC+AR P+C+ C + + C+
Sbjct: 201 LIYHGREVCRARNPRCRDCTLRSYCR 226
>gi|126463452|ref|YP_001044566.1| endonuclease III [Rhodobacter sphaeroides ATCC 17029]
gi|126105116|gb|ABN77794.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides ATCC 17029]
Length = 214
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 144/212 (67%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + EIF P+GEL +VN +TL+VAV LSAQ+TD VNKAT+ LF
Sbjct: 1 MARQLDYRTIHEIFARLHALEAEPRGELEHVNAYTLLVAVALSAQATDAGVNKATRALFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP +ML +GE+ L +IRTIG+YR K+ N+I+LS +L++++D ++P + L LPG
Sbjct: 61 QVTTPAQMLELGEEGLTEHIRTIGLYRNKARNVIALSRLLVDQYDGEVPSSRAALQSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M F P + VDTHIFR++NR G+APG+ + VE++L +P +AH
Sbjct: 121 VGRKTANVVLNMWFHQPAMAVDTHIFRVANRTGIAPGRDVDAVERALEDHVPAPFALHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+WL+LHGRY+C ARKP+C C I +LC ++
Sbjct: 181 HWLILHGRYICVARKPRCGICPIRDLCPYEEK 212
>gi|260550716|ref|ZP_05824924.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
sp. RUH2624]
gi|260406222|gb|EEW99706.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
sp. RUH2624]
Length = 228
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPETELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAVGKNVLEVEHRLVKVIPKEFIIDAHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 186 LHGRYCCIARKPKCFECVVADVC 208
>gi|254295460|ref|YP_003061483.1| endonuclease III [Hirschia baltica ATCC 49814]
gi|254043991|gb|ACT60786.1| endonuclease III [Hirschia baltica ATCC 49814]
Length = 231
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 113/226 (50%), Positives = 162/226 (71%), Gaps = 4/226 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V++KK + S + ++ E+F + P+P+ EL Y + FTL+VAV LSAQ+
Sbjct: 8 VATKKKRVSKPRSRI----KHDDILEMFVKLADDRPNPETELEYNSPFTLVVAVALSAQA 63
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VNKAT+ LF ADTP+KML +GE+ + YI+TIG++R K++N+++LS ++I++F
Sbjct: 64 TDVGVNKATRVLFAHADTPEKMLELGEEGVAKYIKTIGLWRNKAKNVVALSKMIIDDFGG 123
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++PQT E L +LPG+GRK ANV+L+ FG PTI VDTHIFR+SNR GLAPG P++VE
Sbjct: 124 EVPQTREELVKLPGVGRKTANVVLNEVFGQPTIAVDTHIFRVSNRTGLAPGNNPDQVEDL 183
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L R++P + AH+WL+LHGRY C ARKP+C C+I +LCK ++
Sbjct: 184 LERVVPDTFKKGAHHWLILHGRYTCVARKPKCGECVIYDLCKFKEK 229
>gi|77464612|ref|YP_354116.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rhodobacter sphaeroides 2.4.1]
gi|221640524|ref|YP_002526786.1| endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides KD131]
gi|77389030|gb|ABA80215.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rhodobacter sphaeroides 2.4.1]
gi|221161305|gb|ACM02285.1| Endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides KD131]
Length = 214
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 143/212 (67%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + EIF P+GEL +VN +TL+VAV LSAQ+TD VNKAT+ LF
Sbjct: 1 MARQLDYRTIHEIFARLHALEAEPRGELEHVNAYTLLVAVALSAQATDAGVNKATRALFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP +ML +GE+ L +IRTIG+YR K+ N+I+LS +L++++D ++P + L LPG
Sbjct: 61 QVTTPAQMLELGEEGLTEHIRTIGLYRNKARNVIALSRLLVDQYDGEVPSSRAALQSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M F P + VDTHIFR++NR G+APG+ VE++L +P +AH
Sbjct: 121 VGRKTANVVLNMWFHQPAMAVDTHIFRVANRTGIAPGRDVEAVERALEDHVPAPFALHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+WL+LHGRY+C ARKP+C C I +LC ++
Sbjct: 181 HWLILHGRYICVARKPRCGICPIRDLCPYEEK 212
>gi|90415197|ref|ZP_01223133.1| Putative endonuclease III [Photobacterium profundum 3TCK]
gi|90323669|gb|EAS40322.1| Putative endonuclease III [Photobacterium profundum 3TCK]
Length = 213
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I + P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNNQKRTQILERLRAENPHPETELKWSSPFELLIAVLLSAQATDVSVNKATDKLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + ++ YI+TIG++ K+EN+I IL+++ + +IP+ E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGVKTYIKTIGLFNSKAENVIKTCKILLDKHNGEIPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDQVEEKLLKVVPTEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|114563349|ref|YP_750862.1| endonuclease III [Shewanella frigidimarina NCIMB 400]
gi|114334642|gb|ABI72024.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Shewanella frigidimarina NCIMB 400]
Length = 213
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKDKRYQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G L+ YI+TIG+Y K+ N+I+ +LI+ ++P+ E L LPG+GRK
Sbjct: 61 PQAIYDLGIDGLKQYIKTIGLYNNKAVNVINACKMLIDLHAGEVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK ++VE ++L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVDQVELNMLKVVPSEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKDK 208
>gi|306827478|ref|ZP_07460761.1| endonuclease III [Streptococcus pyogenes ATCC 10782]
gi|304430276|gb|EFM33302.1| endonuclease III [Streptococcus pyogenes ATCC 10782]
Length = 218
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKGTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|258545291|ref|ZP_05705525.1| endonuclease III [Cardiobacterium hominis ATCC 15826]
gi|258519504|gb|EEV88363.1| endonuclease III [Cardiobacterium hominis ATCC 15826]
Length = 210
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/203 (51%), Positives = 142/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP + E F F P P EL Y + F L++AV+LSAQ+TD VNKAT+ LF +A+T
Sbjct: 1 MTPAAIAECFRRFRDANPQPTTELEYTSTFELLIAVILSAQATDKGVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+GE L++YI+TIG+Y K+ NI+ IL++E +P L RLPG+GRK
Sbjct: 61 PAAILALGEDGLKDYIKTIGLYNTKAVNILKTCQILLDEHGGAVPADRAALERLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AF P + VDTHIFR++NR G+APGKT VE+ L+ +PP + +AH+WL+
Sbjct: 121 TANVILNTAFRQPVMAVDTHIFRVANRTGIAPGKTVLAVEKGLMARVPPAYLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVC ARKP+C +C+IS+LC
Sbjct: 181 LHGRYVCIARKPRCGACLISDLC 203
>gi|317051814|ref|YP_004112930.1| endonuclease III [Desulfurispirillum indicum S5]
gi|316946898|gb|ADU66374.1| endonuclease III [Desulfurispirillum indicum S5]
Length = 216
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 128/212 (60%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ C PK++ ++ L ++P EL + N F L+VAV+LSAQ TDV VN+ TK LF
Sbjct: 1 MACSLRPKDVRKLIDLLEEQYPDAAPELDFDNAFELLVAVVLSAQCTDVRVNQVTKVLFM 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + A + +L+ I++ G++R K+ N+I+ + +L+ F ++P T + L LPG
Sbjct: 61 HYPDAKALAAANQAELEGIIKSCGLFRSKARNLIAAAKMLVETFGGEVPSTRQELMSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANVI S A G I VDTH+FR+S RIGL+ G+T VEQ L+ P H
Sbjct: 121 VGRKSANVITSCAMGSDAIAVDTHVFRVSRRIGLSDGETVLAVEQDLMAYTPQPKWSQLH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ HGR CKARKPQC C +++ C ++
Sbjct: 181 HLLIFHGRRCCKARKPQCDECTVASFCLYERK 212
>gi|54022312|ref|YP_116554.1| putative endonuclease III [Nocardia farcinica IFM 10152]
gi|54013820|dbj|BAD55190.1| putative endonuclease III [Nocardia farcinica IFM 10152]
Length = 280
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+K+ S Q + LG + + + +P EL + L VA +LSAQ TD
Sbjct: 34 KRKTRSRQAETKLGLVR---RARRMNRTLARAFPDAHCELDFTTPLELAVATILSAQCTD 90
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T LF + +L+ YIR G YR K+ ++I L L+ ++D ++
Sbjct: 91 ERVNMTTPALFARYPDARAYAEANRTELEEYIRPTGFYRNKTSSLIGLGQALVEKYDGEV 150
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P TLE L +LPGIGRK ANVIL AF +P I VDTH R+ R G + P KVE ++
Sbjct: 151 PHTLEELVQLPGIGRKTANVILGNAFDVPGITVDTHFGRLVRRWGWTTEEDPVKVEHAVG 210
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+I K + ++ HGR VC +R+P C +C+++ C
Sbjct: 211 ELIERKDWTMLSHRVIFHGRRVCHSRRPACGACVLAKDCPS 251
>gi|325283562|ref|YP_004256103.1| endonuclease III [Deinococcus proteolyticus MRP]
gi|324315371|gb|ADY26486.1| endonuclease III [Deinococcus proteolyticus MRP]
Length = 235
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 122/224 (54%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+SS S S + P ++ +P + EL + F L+VA +LSAQ+
Sbjct: 7 LSSVTSPSRKKPVPRLPAGARLRAPQVLASLRALYPDARTELEFRTPFELLVATVLSAQA 66
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV+VN AT LF M + ++ YIR IG+YR K++N+ L+ L
Sbjct: 67 TDVSVNAATPALFAAYPDAAAMSLAEPEDIEPYIRRIGLYRAKAKNLAKLARQLTERHGG 126
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E + L G GRK ANV+LS A+G P I VDTH+ R+S R+GL+ P++VE
Sbjct: 127 EVPDDFEAVVALAGAGRKTANVVLSNAYGRPAIAVDTHVGRLSRRLGLSAQTDPDRVEAD 186
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+R+ H+ L+LHGR +C AR+P C CI++N C ++
Sbjct: 187 LMRLFAEGEWIFLHHALILHGRRICVARRPLCSQCIMANFCPKV 230
>gi|311741056|ref|ZP_07714881.1| endonuclease III [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303858|gb|EFQ79936.1| endonuclease III [Corynebacterium pseudogenitalium ATCC 33035]
Length = 218
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 116/203 (57%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+ + ++P + L Y + L++A +LSAQ TD VN T LF
Sbjct: 14 RAPEVNRRLAQEYPDARCALDYDSPLQLLIATVLSAQCTDERVNSVTPELFARYPEAADY 73
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A L++ +R +G R K+ +++ + L+ +F ++P+T++ LT LPG+GRK A V
Sbjct: 74 AAAQRSDLESILRPLGFQRAKAGHLLGIGEKLVADFQGEVPRTVKELTSLPGVGRKTALV 133
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L AFGIP + VDTH R+ R+GL KTP K+E+ + +++P + + ++ HGR
Sbjct: 134 VLGNAFGIPGLTVDTHFGRLMQRLGLTGEKTPVKIERDIAKLVPEEEWTMFSHRVIFHGR 193
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC AR P+C++C++ ++C +
Sbjct: 194 QVCHARTPECEACVLRDMCPAAR 216
>gi|160875219|ref|YP_001554535.1| endonuclease III [Shewanella baltica OS195]
gi|160860741|gb|ABX49275.1| endonuclease III [Shewanella baltica OS195]
gi|315267412|gb|ADT94265.1| endonuclease III [Shewanella baltica OS678]
Length = 213
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQEKRIQILTRLRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A+G L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GRK
Sbjct: 61 AHSIYALGVDGLKQYIKTIGLYNNKAVNVIKACEILIEKYNGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR APGK VE +L+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVDVEDKMLKVVPAEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|323127502|gb|ADX24799.1| endonuclease III [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 218
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L ++ L + +P KGEL + F L++AV+LSAQ+TD VNK T L+ +
Sbjct: 5 KERLRKVLALIAEMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPALWAKYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++N +RTIG+Y+ K++NII + ++ +F ++P+T + L LPG+GRK A
Sbjct: 65 DLASANVTDVENCLRTIGLYKNKAKNIIKTAQAMLTDFGGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ + +P I VDTH+ R++ R+ + AP ++EQ L+ IP K H+ L+
Sbjct: 125 NVVLAEVYAVPAIAVDTHVSRVAKRLNVSAPDADVTEIEQDLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+ P+C C + CK K
Sbjct: 185 FGRYHCLAKNPKCAICPVQTYCKYYK 210
>gi|209883580|ref|YP_002287437.1| endonuclease III [Oligotropha carboxidovorans OM5]
gi|209871776|gb|ACI91572.1| endonuclease III [Oligotropha carboxidovorans OM5]
Length = 273
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 114/219 (52%), Positives = 160/219 (73%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ ++ ++ E+ E F F P PKGEL ++N+FTL+VAV+LSAQ+TD VNK
Sbjct: 49 KKRASATRPKRWSEAEVHEAFSRFRAANPEPKGELEHLNNFTLLVAVVLSAQATDAGVNK 108
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT+ LF +ADTP+KMLA+GE L+ +I+TIG+YR K++N+I+LS LI D ++P+T E
Sbjct: 109 ATRSLFPVADTPEKMLALGEDGLREHIKTIGLYRAKAKNVIALSEQLIANHDGEVPRTRE 168
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+GRK ANV+L++AFG TI VDTH+FR+ NR LAPG TP VE LLR++P
Sbjct: 169 ELEALPGVGRKTANVVLNIAFGEKTIAVDTHLFRVGNRTYLAPGDTPLAVEMELLRVVPD 228
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +AH+WL+LHGRY C ARKP+C+ CII++LC+ ++
Sbjct: 229 EFMRHAHHWLILHGRYTCIARKPRCEVCIINDLCRWPEK 267
>gi|94984356|ref|YP_603720.1| endonuclease III [Deinococcus geothermalis DSM 11300]
gi|94554637|gb|ABF44551.1| DNA-(apurinic or apyrimidinic site) lyase [Deinococcus geothermalis
DSM 11300]
Length = 233
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 3/218 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
S P G + +P + EL + N + L+VA +LSAQ+TDV+
Sbjct: 15 TRPSSPSRLPDGA---KARAPLVLSALETLYPDARTELEFGNPYELLVATVLSAQATDVS 71
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN AT LF + + ++ YIRTIG+YR K+ N+ L+ +L+ ++P
Sbjct: 72 VNAATPALFARYPDAFALAQAAPEDIEPYIRTIGLYRNKARNLALLARLLVERHGGEVPN 131
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
E + LPG+GRK ANV+LS A+G P I VDTH+ R++ R+GL+ P++VE+ L R+
Sbjct: 132 DFEAVVALPGVGRKTANVVLSNAYGTPAIAVDTHVGRLARRLGLSTQTHPDRVERDLQRL 191
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
P + H+ L+LHGR VC ARKP+C +C++ C
Sbjct: 192 FPRERWVFLHHALILHGRRVCVARKPRCAACLMQAFCP 229
>gi|311745290|ref|ZP_07719075.1| endonuclease III [Algoriphagus sp. PR1]
gi|126577823|gb|EAZ82043.1| endonuclease III [Algoriphagus sp. PR1]
Length = 221
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E FS P + EL Y N F L+VAV+LSAQ TD +N T LF+
Sbjct: 1 MLKKERYEAFINHFSENMPVAETELQYENPFQLLVAVVLSAQCTDKRINMVTPALFKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + A +L YI+++ K+++++ L +L+ +F+ +IP+T+ L +LPG+GR
Sbjct: 61 EPEFLAASNFDELFPYIKSVSYPNNKTKHLLGLGKMLVEDFNGQIPETVSELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ + P + VDTH+FR+S R+GL KTP +VE+ L+R IP ++ + AH+
Sbjct: 121 KTANVITSVVWNQPNMAVDTHVFRVSKRLGLVTQTAKTPLEVEKQLIRHIPKEYVHVAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRYVC ARKP+C+ C +++ CK ++
Sbjct: 181 WLILHGRYVCLARKPKCEECSLTHFCKYFEK 211
>gi|158319946|ref|YP_001512453.1| endonuclease III [Alkaliphilus oremlandii OhILAs]
gi|158140145|gb|ABW18457.1| endonuclease III [Alkaliphilus oremlandii OhILAs]
Length = 210
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 88/201 (43%), Positives = 127/201 (63%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
++I L ++P K EL + N F L+VA +LSAQ+TD VN+ TK LF+ T + L
Sbjct: 6 KKIIELLMAEYPDAKCELEHENPFQLLVATILSAQTTDKKVNEVTKDLFKEYPTLDEFLL 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + +L+N I+ IG+YR K+++I ++ L EF+ ++P T++G+T L G GRK ANV+L
Sbjct: 66 LTQAELENRIKQIGLYRNKAKHIYTMCRQLKEEFNGEVPNTMDGITSLAGAGRKTANVVL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
S AFG+P+I VDTH+FR+SNRIGLA E L + I K AH+ ++ HGR
Sbjct: 126 SNAFGVPSIAVDTHVFRVSNRIGLANADNVLDTELQLQKAISKKLWSLAHHLIIFHGRRC 185
Query: 206 CKARKPQCQSCIISNLCKRIK 226
C AR P C C+I + CK K
Sbjct: 186 CYARNPNCGECVIKDYCKYYK 206
>gi|213966307|ref|ZP_03394490.1| endonuclease III [Corynebacterium amycolatum SK46]
gi|213951080|gb|EEB62479.1| endonuclease III [Corynebacterium amycolatum SK46]
Length = 260
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 113/203 (55%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I ++ +P+ EL + N + L VA +LSAQ TDV VN T LF +P
Sbjct: 3 RRARRINRTLAVAYPNAHCELDFRNPYELAVATILSAQCTDVRVNMTTPALFARYPSPAD 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +++++ +R G YR K+ NII + ++ + ++P TL+ L +LPG+GRK AN
Sbjct: 63 LAVANQEEVEELVRPTGFYRNKAANIIGFAQGVMEQHGGEVPGTLDELVKLPGVGRKTAN 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFG+P + VDTH R+ R+GL + P +VE ++ ++P + L+ HG
Sbjct: 123 VVLGNAFGVPGLTVDTHFGRLVRRMGLTEQEDPVRVEHEMMEVLPRAEWTWFSHRLIFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R VC +R+ C +C ++ C
Sbjct: 183 RRVCHSRRAACGACFLAADCPSY 205
>gi|59800597|ref|YP_207309.1| putative endonuclease III [Neisseria gonorrhoeae FA 1090]
gi|59717492|gb|AAW88897.1| putative endonuclease III [Neisseria gonorrhoeae FA 1090]
Length = 209
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 103/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADT
Sbjct: 1 MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ I++ +++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRIVLEKYNGQVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 181 LHGRYTCKALKPQCQTCIINDLCEY 205
>gi|237745586|ref|ZP_04576066.1| endonuclease III [Oxalobacter formigenes HOxBLS]
gi|229376937|gb|EEO27028.1| endonuclease III [Oxalobacter formigenes HOxBLS]
Length = 213
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 146/205 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP+++ +IF F P P+ EL + + L+VAV+LSAQ+TD++VNKAT+ L+ +A+T
Sbjct: 1 MTPEKVVQIFERFEKANPDPRSELQFCTPYELLVAVMLSAQATDISVNKATEKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ M+ +G + L Y++TI +Y KS NI+ +S IL+ + +P E L LPG+GRK
Sbjct: 61 PEAMVKLGVEGLMPYVKTINLYPTKSRNIVKMSEILLEKHGGAVPDNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTHIFR+SNR GLAPGK +VE+ L+ +IPP+ NAH+WL+
Sbjct: 121 TANVVLNNAFQQAVMAVDTHIFRVSNRTGLAPGKNVLEVEKRLVEVIPPRFMMNAHHWLL 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+PQC C+IS+LC+
Sbjct: 181 LHGRYVCKAREPQCPGCLISDLCEY 205
>gi|110678310|ref|YP_681317.1| endonuclease III [Roseobacter denitrificans OCh 114]
gi|109454426|gb|ABG30631.1| endonuclease III [Roseobacter denitrificans OCh 114]
Length = 248
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 106/220 (48%), Positives = 151/220 (68%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
++ + + + EIF F P PKGEL +VN +TL+VAV LSAQ+TD
Sbjct: 24 ARARERTHTTTMAKQLDYHTIREIFTRFQAADPEPKGELEHVNVYTLVVAVALSAQATDA 83
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VNKAT+ LF+IADTPQKML +G + + +I+TIG++R+K++N+I LS IL++++ +P
Sbjct: 84 GVNKATRALFKIADTPQKMLDLGLEGVTEHIKTIGLFRQKAKNVIKLSQILVDQYGGVVP 143
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
+ L LPG+GRK ANV+L+M + P VDTHIFR+ NR G+APGKT + VE+++
Sbjct: 144 NSRAALQSLPGVGRKTANVVLNMWWQQPAQAVDTHIFRLGNRTGIAPGKTVDIVERAIED 203
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
IP Q +AH+W++LHGRY CKARKP C +CII++LC
Sbjct: 204 NIPADFQLHAHHWMILHGRYHCKARKPLCGTCIINDLCPF 243
>gi|139473911|ref|YP_001128627.1| endonuclease III [Streptococcus pyogenes str. Manfredo]
gi|134272158|emb|CAM30403.1| putative endonuclease III [Streptococcus pyogenes str. Manfredo]
Length = 218
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 121/206 (58%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+ + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKNHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|120598973|ref|YP_963547.1| endonuclease III [Shewanella sp. W3-18-1]
gi|146292942|ref|YP_001183366.1| endonuclease III [Shewanella putrefaciens CN-32]
gi|120559066|gb|ABM24993.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Shewanella sp. W3-18-1]
gi|145564632|gb|ABP75567.1| endonuclease III [Shewanella putrefaciens CN-32]
gi|319426529|gb|ADV54603.1| endonuclease III [Shewanella putrefaciens 200]
Length = 213
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNQAKRIQ-ILTRLRDNNPKPETELNFTSPFELLVAVTLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A+G + L+ YI+TIG+Y K+ N+I ILI +++ ++P+ E L LPG+GR
Sbjct: 60 TAHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR++NR APGK +VE+ +L+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEERMLKVVPDEFKVDVHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCLARKPRCGSCIIEDLCEFKEK 208
>gi|146311471|ref|YP_001176545.1| endonuclease III [Enterobacter sp. 638]
gi|145318347|gb|ABP60494.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638]
Length = 211
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I + P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRLTILTRLRNENPHPTTELNFNSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + +++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|46200194|ref|YP_005861.1| endonuclease III [Thermus thermophilus HB27]
gi|46197822|gb|AAS82234.1| endonuclease III [Thermus thermophilus HB27]
Length = 220
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 124/210 (59%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
G E+ +P + EL + N F L+VA +LSAQ+TD +VN+AT LF
Sbjct: 8 KEGPKEKKARAREVLKALKAAYPGARTELRHENPFQLLVATVLSAQATDKSVNEATPALF 67
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + ++++ YIR IG+YR K++N+++L+ L+ E+ ++P+ E L RLP
Sbjct: 68 ARFPDAKALAEATPEEVEPYIRRIGLYRTKAKNLVALARRLVEEYGGEVPKEKEALMRLP 127
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+G K A V+L AFG+P I VDTH+ R++ R+ + K P ++ + L + P +
Sbjct: 128 GVGWKTATVVLGAAFGVPGIAVDTHVARLARRLCFSEAKAPERIGKDLEALFPKEDWVFV 187
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H+ LVLHGRYVC AR+P+C +C+++ C
Sbjct: 188 HHALVLHGRYVCTARRPRCGACVLAPYCPS 217
>gi|294508391|ref|YP_003572449.1| Endonuclease III [Salinibacter ruber M8]
gi|294344720|emb|CBH25498.1| Endonuclease III [Salinibacter ruber M8]
Length = 386
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 5/218 (2%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
SP+G + + + P EL Y + L+VAV+LSAQ TD VNKA
Sbjct: 99 PAHPSPVG---RSDRADVVLEELRERIDRPTTELQYDTPYQLLVAVILSAQCTDERVNKA 155
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF+ T + + + YI++I K+ + ++ +++ FD K+P+T++
Sbjct: 156 TPDLFDAYPTVEALAEATPDDIHPYIQSITFPNNKAGYLARMARQVVDNFDGKVPETIDD 215
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIP 187
L L G+GRK A V+ +A + VDTH+FR++NRIGL TP KVEQ L R+IP
Sbjct: 216 LETLTGVGRKTARVVAQVAHDADALPVDTHVFRVANRIGLVKEDATTPKKVEQQLKRVIP 275
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
AH+ L+LHGRY C AR P C C I CK
Sbjct: 276 KAEWGEAHHLLILHGRYTCTARSPDCHDCPIHEECKHY 313
>gi|331268741|ref|YP_004395233.1| endonuclease III [Clostridium botulinum BKT015925]
gi|329125291|gb|AEB75236.1| endonuclease III [Clostridium botulinum BKT015925]
Length = 208
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 138/206 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++E++ + + K L + + L++A +LSAQ TD VN T LF+ ++
Sbjct: 1 MKKHDIEKVIEVLEHNYKGAKCALNFKTPYELLIATMLSAQCTDERVNIVTGELFKEYNS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM+ + +++L I++ G+Y+ KS+NI+ S+ ++N+++ IP ++E L +LPGIGRK
Sbjct: 61 PEKMITLTQEELGQKIKSCGLYKNKSKNILGASYEILNKYNGNIPGSMEQLIQLPGIGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFGIP I VDTH+FR+SNRIG+A GK + VE+ L++ IP + + H++L+
Sbjct: 121 TANVVLSNAFGIPAIAVDTHVFRVSNRIGIAKGKNVDVVEKELMKNIPEEKWSDTHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKARKP C+ C ++ C+ +
Sbjct: 181 WHGRKICKARKPDCEICPVAPYCEYV 206
>gi|15674949|ref|NP_269123.1| putative endonuclease III [Streptococcus pyogenes M1 GAS]
gi|71910543|ref|YP_282093.1| endonuclease III [Streptococcus pyogenes MGAS5005]
gi|13622093|gb|AAK33844.1| putative endonuclease III (DNA repair) [Streptococcus pyogenes M1
GAS]
gi|71853325|gb|AAZ51348.1| endonuclease III [Streptococcus pyogenes MGAS5005]
Length = 218
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|255324181|ref|ZP_05365303.1| endonuclease III [Corynebacterium tuberculostearicum SK141]
gi|255298697|gb|EET77992.1| endonuclease III [Corynebacterium tuberculostearicum SK141]
Length = 218
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 116/203 (57%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+ + ++P+ + L Y + L++A +LSAQ TD VN T LF
Sbjct: 14 RAPEVNRRLAQEYPNARCALDYDSPLQLLIATVLSAQCTDERVNSVTPELFSRYPEAADY 73
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ L+ +R +G R K+ +++ + L+ +F ++P+T++ LT LPG+GRK A V
Sbjct: 74 ASAQRSDLERILRPLGFQRAKAGHLLGIGEKLVADFQGEVPRTVKELTSLPGVGRKTALV 133
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L AFGIP + VDTH R+ R+GL+ KTP K+E+ + +++P + + ++ HGR
Sbjct: 134 VLGNAFGIPGLTVDTHFSRLMQRLGLSGEKTPVKIERDIAKLVPEEEWTMFSHRVIFHGR 193
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC AR P+C +C++ ++C +
Sbjct: 194 QVCHARTPECDACVLRDMCPAAR 216
>gi|322832824|ref|YP_004212851.1| endonuclease III [Rahnella sp. Y9602]
gi|321168025|gb|ADW73724.1| endonuclease III [Rahnella sp. Y9602]
Length = 212
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRTEILSRLRDNNPHPTTELVYTTPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+G ++ YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PESVLALGVDGVKEYIKTIGLFNAKAENVIKTCRILLEKHHGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGKT + VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKTVDDVEEKLLKVVPAEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCESKEK 208
>gi|148553130|ref|YP_001260712.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Sphingomonas wittichii RW1]
gi|148498320|gb|ABQ66574.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Sphingomonas wittichii RW1]
Length = 218
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 102/207 (49%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E + + P+P+ EL YVN +TL+VAV LSAQ+TDV VNKAT LF T
Sbjct: 1 MKKADIFEFYRRLAEDDPAPETELNYVNPYTLLVAVALSAQATDVGVNKATGPLFARVTT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+ML +GE+ L+ +I+TIG++ K++N+I+ +HIL++++ ++PQ+ E L LPG+GRK
Sbjct: 61 PQQMLELGEEGLKRHIKTIGLFNTKAKNVIAAAHILVDKYGGEVPQSREALEELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG TI VDTHIFR++NR GLAPGK +VE L ++ P AH+WL+
Sbjct: 121 TANVVMNTAFGAETIAVDTHIFRVANRTGLAPGKNVLQVELKLEKVTPKPFLQGAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGRY+CKARKP+C C +++LC K
Sbjct: 181 LHGRYICKARKPECWRCPVADLC-AFK 206
>gi|251770935|gb|EES51520.1| Endonuclease III/Nth [Leptospirillum ferrodiazotrophum]
Length = 228
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 116/212 (54%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
L+ I P P+ EL + N F L+VA +LSAQ+TD+ VN+ T L
Sbjct: 2 KEESLAQKKDRLKNILARLKQAIPDPRTELAFHNPFELLVATVLSAQTTDLTVNRVTPEL 61
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F TP + +L+ +R G +R+K++++ L+ L + +P+T+E L L
Sbjct: 62 FARFPTPAALAEASLSELETILRPTGFFRRKAQHVKELAQALATRYQGVVPETMEELVTL 121
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK A+V+L F P I VDTH+ R+S R+GL P +VE+ L +IP K
Sbjct: 122 PGVGRKTASVVLFHGFSRPAIFVDTHVGRVSKRLGLTESDDPERVERDLSELIPEKDWGI 181
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
A L+LHGR VC AR+P C++C ++LC
Sbjct: 182 AASRLLLHGRRVCLARRPLCKTCPCTDLCPAF 213
>gi|146276253|ref|YP_001166412.1| endonuclease III [Rhodobacter sphaeroides ATCC 17025]
gi|145554494|gb|ABP69107.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides ATCC 17025]
Length = 214
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 142/209 (67%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + EIF P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF
Sbjct: 1 MARQLDYRTIHEIFTRLHALEPEPKGELEHVNAYTLLVAVALSAQATDAGVNKATRALFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP +ML +GE+ L +IRTIG+YR K++N+I+LS +L++ +D ++P + L LPG
Sbjct: 61 RVTTPAQMLELGEEGLTEHIRTIGLYRNKAKNVIALSRLLVDHYDGEVPASRAALQSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M F P + VDTHIFR++NR G+APG+ VE++L +P +AH
Sbjct: 121 VGRKTANVVLNMWFHQPAMAVDTHIFRVANRTGIAPGRDVEAVERALEDHVPAPFALHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRY+C ARKP+C C I +LC
Sbjct: 181 HWLILHGRYICVARKPKCGICPIRDLCLY 209
>gi|156934165|ref|YP_001438081.1| hypothetical protein ESA_01992 [Cronobacter sakazakii ATCC BAA-894]
gi|156532419|gb|ABU77245.1| hypothetical protein ESA_01992 [Cronobacter sakazakii ATCC BAA-894]
Length = 211
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL++ + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQAKRIEILTRLRANNPHPTTELHFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G ++ YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PEAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK + VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAPGKNVDAVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYAEK 208
>gi|15963921|ref|NP_384274.1| endonuclease III protein [Sinorhizobium meliloti 1021]
gi|307306333|ref|ZP_07586077.1| endonuclease III [Sinorhizobium meliloti BL225C]
gi|307319220|ref|ZP_07598649.1| endonuclease III [Sinorhizobium meliloti AK83]
gi|15073096|emb|CAC41555.1| Probable endonuclease III [Sinorhizobium meliloti 1021]
gi|306895056|gb|EFN25813.1| endonuclease III [Sinorhizobium meliloti AK83]
gi|306902175|gb|EFN32772.1| endonuclease III [Sinorhizobium meliloti BL225C]
Length = 263
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 127/208 (61%), Positives = 172/208 (82%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
Y E+EEIF FS++ P PKGEL +VN FTL+VAV LSAQ+TD VNKAT+ LF +ADT
Sbjct: 33 YRTAEVEEIFRRFSVQRPEPKGELEHVNPFTLVVAVALSAQATDAGVNKATRQLFAVADT 92
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KMLA+GE+++++YI+TIG+YR K++N+I+LS LI +F ++P+T E L LPG+GRK
Sbjct: 93 PEKMLALGEERVRDYIKTIGLYRNKAKNVIALSEKLIADFGGEVPRTREELVTLPGVGRK 152
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LSMAFG PT+ VDTHIFRI+NRI LAPGKTP++VE LLR+IP + ++AH+WL+
Sbjct: 153 TANVVLSMAFGQPTMAVDTHIFRIANRIRLAPGKTPDEVEAHLLRVIPEHYLFHAHHWLI 212
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR+P+C+ C+I++LCK ++
Sbjct: 213 LHGRYVCKARRPECERCVIADLCKSPEK 240
>gi|239998271|ref|ZP_04718195.1| putative endonuclease III [Neisseria gonorrhoeae 35/02]
gi|240013455|ref|ZP_04720368.1| putative endonuclease III [Neisseria gonorrhoeae DGI18]
gi|240015894|ref|ZP_04722434.1| putative endonuclease III [Neisseria gonorrhoeae FA6140]
gi|240080034|ref|ZP_04724577.1| putative endonuclease III [Neisseria gonorrhoeae FA19]
gi|240112243|ref|ZP_04726733.1| putative endonuclease III [Neisseria gonorrhoeae MS11]
gi|240114987|ref|ZP_04729049.1| putative endonuclease III [Neisseria gonorrhoeae PID18]
gi|240117272|ref|ZP_04731334.1| putative endonuclease III [Neisseria gonorrhoeae PID1]
gi|240120526|ref|ZP_04733488.1| putative endonuclease III [Neisseria gonorrhoeae PID24-1]
gi|240122824|ref|ZP_04735780.1| putative endonuclease III [Neisseria gonorrhoeae PID332]
gi|240125020|ref|ZP_04737906.1| putative endonuclease III [Neisseria gonorrhoeae SK-92-679]
gi|240127533|ref|ZP_04740194.1| putative endonuclease III [Neisseria gonorrhoeae SK-93-1035]
gi|254493049|ref|ZP_05106220.1| endonuclease III [Neisseria gonorrhoeae 1291]
gi|260441198|ref|ZP_05795014.1| putative endonuclease III [Neisseria gonorrhoeae DGI2]
gi|268594126|ref|ZP_06128293.1| endonuclease III [Neisseria gonorrhoeae 35/02]
gi|268596178|ref|ZP_06130345.1| endonuclease III [Neisseria gonorrhoeae FA19]
gi|268598302|ref|ZP_06132469.1| endonuclease III [Neisseria gonorrhoeae MS11]
gi|268600655|ref|ZP_06134822.1| endonuclease III [Neisseria gonorrhoeae PID18]
gi|268602967|ref|ZP_06137134.1| endonuclease III [Neisseria gonorrhoeae PID1]
gi|268681439|ref|ZP_06148301.1| endonuclease III [Neisseria gonorrhoeae PID332]
gi|268683606|ref|ZP_06150468.1| endonuclease III [Neisseria gonorrhoeae SK-92-679]
gi|268685909|ref|ZP_06152771.1| endonuclease III [Neisseria gonorrhoeae SK-93-1035]
gi|293397666|ref|ZP_06641872.1| endonuclease III [Neisseria gonorrhoeae F62]
gi|226512089|gb|EEH61434.1| endonuclease III [Neisseria gonorrhoeae 1291]
gi|268547515|gb|EEZ42933.1| endonuclease III [Neisseria gonorrhoeae 35/02]
gi|268549966|gb|EEZ44985.1| endonuclease III [Neisseria gonorrhoeae FA19]
gi|268582433|gb|EEZ47109.1| endonuclease III [Neisseria gonorrhoeae MS11]
gi|268584786|gb|EEZ49462.1| endonuclease III [Neisseria gonorrhoeae PID18]
gi|268587098|gb|EEZ51774.1| endonuclease III [Neisseria gonorrhoeae PID1]
gi|268621723|gb|EEZ54123.1| endonuclease III [Neisseria gonorrhoeae PID332]
gi|268623890|gb|EEZ56290.1| endonuclease III [Neisseria gonorrhoeae SK-92-679]
gi|268626193|gb|EEZ58593.1| endonuclease III [Neisseria gonorrhoeae SK-93-1035]
gi|291611612|gb|EFF40681.1| endonuclease III [Neisseria gonorrhoeae F62]
Length = 209
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADT
Sbjct: 1 MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 181 LHGRYTCKALKPQCQTCIINDLCEY 205
>gi|307244080|ref|ZP_07526199.1| endonuclease III [Peptostreptococcus stomatis DSM 17678]
gi|306492604|gb|EFM64638.1| endonuclease III [Peptostreptococcus stomatis DSM 17678]
Length = 212
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 133/210 (63%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T K+ EI L + + P EL + + F L+VA +LSAQ TDV VN T+ +F+
Sbjct: 1 MPRKKTKKQTIEILDLLADQHPDAHCELVHSSAFELLVATILSAQCTDVRVNIVTEEMFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ PQ + ++++ I+T G+Y+ K++ I S IL++ + ++P LE L +LPG
Sbjct: 61 KYNQPQDFKDLSIGQIEDMIKTCGLYKSKAKKIKETSSILVDLYGGQVPDNLEDLVKLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK A V+LS AFG+P I VDTH+FR+SNRIG+ TP K E +L++ IP ++H
Sbjct: 121 VGRKTAGVVLSNAFGVPAIAVDTHVFRVSNRIGIVKETTPEKTEFALMKAIPKDRWTHSH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR VCKARKP+C +C IS++C
Sbjct: 181 HLLIFHGRRVCKARKPECSNCSISHMCNYY 210
>gi|68537066|ref|YP_251771.1| endonuclease III [Corynebacterium jeikeium K411]
gi|68264665|emb|CAI38153.1| endonuclease III [Corynebacterium jeikeium K411]
Length = 271
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+PLG + +I + + +P EL + N L+VA +LSAQ TD VN T
Sbjct: 26 ETPLG---RKRRARKINRMLAEAYPDAHCELDFNNPLELLVATVLSAQCTDKRVNAVTPA 82
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF T + ++ I++ G YR K+++I+ L ++ ++P TLE L +
Sbjct: 83 LFRCYPTAADYAEANIEDVEQLIKSTGFYRSKAKSIVGLGQAIVERHGGEVPGTLEQLVK 142
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L AFG+P I VDTH+ R++ R L + P +VE+ L+ +I K
Sbjct: 143 LPGVGRKTANVVLGNAFGVPGITVDTHLGRLARRWKLTEHEDPVQVERDLMELIERKEWT 202
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + HGR +C +R+ C +C ++ C
Sbjct: 203 LYSHRAIFHGRRICHSRRAACGACFLARQCPSF 235
>gi|56808324|ref|ZP_00366085.1| COG0177: Predicted EndoIII-related endonuclease [Streptococcus
pyogenes M49 591]
gi|209559276|ref|YP_002285748.1| Endonuclease III [Streptococcus pyogenes NZ131]
gi|209540477|gb|ACI61053.1| Endonuclease III [Streptococcus pyogenes NZ131]
Length = 218
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSSDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|260579410|ref|ZP_05847292.1| endonuclease III [Corynebacterium jeikeium ATCC 43734]
gi|258602539|gb|EEW15834.1| endonuclease III [Corynebacterium jeikeium ATCC 43734]
Length = 271
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+PLG + +I + + +P EL + N L+VA +LSAQ TD VN T
Sbjct: 26 ETPLG---RKRRARKINRMLAEAYPDAHCELDFSNPLELLVATVLSAQCTDKRVNAVTPA 82
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF T + ++ I++ G YR K+++I+ L ++ ++P TLE L +
Sbjct: 83 LFRRYPTAADYAEANIEDVEQLIKSTGFYRSKAKSIVGLGQAIVERHGGEVPGTLEQLVK 142
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L AFG+P I VDTH+ R++ R L + P +VE+ L+ +I K
Sbjct: 143 LPGVGRKTANVVLGNAFGVPGITVDTHLGRLARRWKLTEHEDPVQVERDLMELIERKEWT 202
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + HGR +C +R+ C +C ++ C
Sbjct: 203 LYSHRAIFHGRRICHSRRAACGACFLARQCPSF 235
>gi|167585881|ref|ZP_02378269.1| endonuclease III [Burkholderia ubonensis Bu]
Length = 214
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P+P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIFETLQSLNPNPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ IL+ ++ ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVTEYIKTIGLYRTKAKNVVAACRILLEQYGGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPTVAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|90421863|ref|YP_530233.1| endonuclease III [Rhodopseudomonas palustris BisB18]
gi|90103877|gb|ABD85914.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodopseudomonas palustris BisB18]
Length = 256
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 111/208 (53%), Positives = 156/208 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+T E+ E F F+ P PKGEL ++N FTL+VAV+LSAQ+TD VNKAT+ LF +ADT
Sbjct: 47 WTAAEVREAFGRFAKANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRALFAVADT 106
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKML +GE +++ I+TIG+YR K++N+I+LS LI+EF ++P++ L LPG GRK
Sbjct: 107 PQKMLDLGEDAVRDSIKTIGLYRNKAKNVIALSQKLISEFGGEVPRSRAELETLPGAGRK 166
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+MAFG T+ VDTH+FR++NR GLA G TP VE L ++IP + +AH+WL+
Sbjct: 167 TANVVLNMAFGERTMAVDTHVFRVANRTGLASGDTPLAVELGLEKVIPTEFMLHAHHWLI 226
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C+ C+I++LC+ ++
Sbjct: 227 LHGRYTCLARKPRCEVCLINDLCRWPEK 254
>gi|193212151|ref|YP_001998104.1| endonuclease III [Chlorobaculum parvum NCIB 8327]
gi|193085628|gb|ACF10904.1| endonuclease III [Chlorobaculum parvum NCIB 8327]
Length = 214
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 132/210 (62%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ P+++ I + WP+PK EL Y F L+VA +++AQ+TD VN+ T LF+ A
Sbjct: 2 SMTVPEKIAFIDKALTAVWPNPKSELDYETPFQLLVATIMAAQATDKKVNQLTVELFKAA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ M + ++ IR I Y K++NI+++S L++EF +P + E L LPG+G
Sbjct: 62 PDAEAMSRMDVDDIKTIIRPINYYNNKAKNILAMSQRLVDEFGGDVPASREALESLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+LS AFG+PT+ VDTH+ R+SNRIGL P + E++LL+IIP + H++
Sbjct: 122 RKTANVVLSNAFGVPTMPVDTHVHRVSNRIGLCKTSKPEQTEEALLKIIPESRMIDFHHY 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LVLHGRY CKA+KP+C C I C ++
Sbjct: 182 LVLHGRYTCKAKKPECSKCPIIEACDWPEK 211
>gi|21910178|ref|NP_664446.1| putative endonuclease III (DNA repair) [Streptococcus pyogenes
MGAS315]
gi|28896122|ref|NP_802472.1| endonuclease III (DNA repair) [Streptococcus pyogenes SSI-1]
gi|50914102|ref|YP_060074.1| endonuclease III [Streptococcus pyogenes MGAS10394]
gi|71903375|ref|YP_280178.1| endonuclease III [Streptococcus pyogenes MGAS6180]
gi|94988419|ref|YP_596520.1| endonuclease III [Streptococcus pyogenes MGAS9429]
gi|94992299|ref|YP_600398.1| endonuclease III [Streptococcus pyogenes MGAS2096]
gi|94994220|ref|YP_602318.1| endonuclease III [Streptococcus pyogenes MGAS10750]
gi|21904371|gb|AAM79249.1| putative endonuclease III (DNA repair) [Streptococcus pyogenes
MGAS315]
gi|28811372|dbj|BAC64305.1| putative endonuclease III (DNA repair) [Streptococcus pyogenes
SSI-1]
gi|50903176|gb|AAT86891.1| Endonuclease III [Streptococcus pyogenes MGAS10394]
gi|71802470|gb|AAX71823.1| endonuclease III [Streptococcus pyogenes MGAS6180]
gi|94541927|gb|ABF31976.1| endonuclease III [Streptococcus pyogenes MGAS9429]
gi|94545807|gb|ABF35854.1| Endonuclease III [Streptococcus pyogenes MGAS2096]
gi|94547728|gb|ABF37774.1| Endonuclease III [Streptococcus pyogenes MGAS10750]
Length = 218
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|254420888|ref|ZP_05034612.1| endonuclease III [Brevundimonas sp. BAL3]
gi|196187065|gb|EDX82041.1| endonuclease III [Brevundimonas sp. BAL3]
Length = 251
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 142/203 (69%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E IF S P PK EL + N FTL+VAV LSAQ+TDV+VNKAT+ LF +ADTPQ
Sbjct: 38 EDRVEAIFKRLSGVMPEPKTELNFSNPFTLVVAVALSAQATDVSVNKATERLFRVADTPQ 97
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
KMLA+GE+ L YI +IG+YR K+ N+I+LS +++ + ++P L LPG+GRK A
Sbjct: 98 KMLALGEEGLIPYIASIGLYRGKARNVIALSRLVLEQHGGEVPLNRADLQALPGVGRKTA 157
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+V+L+ I VDTH+FR+S+R+GLA TP+KVE L +++P + AH+WL+LH
Sbjct: 158 SVVLNELGIEAAIAVDTHVFRVSHRLGLANAGTPDKVEAQLFKVVPEQWLPKAHHWLILH 217
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GRY C ARKP+C SC+I++LC
Sbjct: 218 GRYTCTARKPKCLSCVIADLCPS 240
>gi|167039943|ref|YP_001662928.1| endonuclease III [Thermoanaerobacter sp. X514]
gi|300915499|ref|ZP_07132811.1| endonuclease III [Thermoanaerobacter sp. X561]
gi|307724733|ref|YP_003904484.1| endonuclease III [Thermoanaerobacter sp. X513]
gi|166854183|gb|ABY92592.1| endonuclease III [Thermoanaerobacter sp. X514]
gi|300888451|gb|EFK83601.1| endonuclease III [Thermoanaerobacter sp. X561]
gi|307581794|gb|ADN55193.1| endonuclease III [Thermoanaerobacter sp. X513]
Length = 213
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 128/207 (61%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF+ TP
Sbjct: 4 TKDEALKVIEILKETYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFKKYKTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++++K+P+TLE L LPG+GRK
Sbjct: 64 EDFLKLTPEELQEEIRECGLYRNKSKSILETCKILKEKYNSKVPETLEELMTLPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ +IP +H+ L+
Sbjct: 124 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFTTEKQLMELIPENLWSLSHHLLIH 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C ARKP+C C +++LC K+
Sbjct: 184 HGRNLCMARKPKCDECPVNHLCLYFKE 210
>gi|22125970|ref|NP_669393.1| endonuclease III [Yersinia pestis KIM 10]
gi|45441837|ref|NP_993376.1| endonuclease III [Yersinia pestis biovar Microtus str. 91001]
gi|51596486|ref|YP_070677.1| endonuclease III [Yersinia pseudotuberculosis IP 32953]
gi|108807593|ref|YP_651509.1| endonuclease III [Yersinia pestis Antiqua]
gi|108811869|ref|YP_647636.1| endonuclease III [Yersinia pestis Nepal516]
gi|145598193|ref|YP_001162269.1| endonuclease III [Yersinia pestis Pestoides F]
gi|149365842|ref|ZP_01887877.1| endonuclease III [Yersinia pestis CA88-4125]
gi|153948366|ref|YP_001400876.1| endonuclease III [Yersinia pseudotuberculosis IP 31758]
gi|162419397|ref|YP_001606692.1| endonuclease III [Yersinia pestis Angola]
gi|165927359|ref|ZP_02223191.1| endonuclease III [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938263|ref|ZP_02226822.1| endonuclease III [Yersinia pestis biovar Orientalis str. IP275]
gi|166010761|ref|ZP_02231659.1| endonuclease III [Yersinia pestis biovar Antiqua str. E1979001]
gi|166210692|ref|ZP_02236727.1| endonuclease III [Yersinia pestis biovar Antiqua str. B42003004]
gi|167400818|ref|ZP_02306324.1| endonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420201|ref|ZP_02311954.1| endonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424998|ref|ZP_02316751.1| endonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167467741|ref|ZP_02332445.1| endonuclease III [Yersinia pestis FV-1]
gi|170024248|ref|YP_001720753.1| endonuclease III [Yersinia pseudotuberculosis YPIII]
gi|186895536|ref|YP_001872648.1| endonuclease III [Yersinia pseudotuberculosis PB1/+]
gi|218929335|ref|YP_002347210.1| endonuclease III [Yersinia pestis CO92]
gi|229894924|ref|ZP_04510102.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis Pestoides A]
gi|229897667|ref|ZP_04512823.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229898312|ref|ZP_04513459.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis biovar Orientalis str. India 195]
gi|229902171|ref|ZP_04517292.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis Nepal516]
gi|270490644|ref|ZP_06207718.1| endonuclease III [Yersinia pestis KIM D27]
gi|294503728|ref|YP_003567790.1| endonuclease III [Yersinia pestis Z176003]
gi|21958913|gb|AAM85644.1|AE013810_7 endonuclease III [Yersinia pestis KIM 10]
gi|45436699|gb|AAS62253.1| endonuclease III [Yersinia pestis biovar Microtus str. 91001]
gi|51589768|emb|CAH21398.1| endonuclease III [Yersinia pseudotuberculosis IP 32953]
gi|108775517|gb|ABG18036.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Yersinia pestis Nepal516]
gi|108779506|gb|ABG13564.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Yersinia pestis Antiqua]
gi|115347946|emb|CAL20868.1| endonuclease III [Yersinia pestis CO92]
gi|145209889|gb|ABP39296.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Yersinia pestis Pestoides F]
gi|149292255|gb|EDM42329.1| endonuclease III [Yersinia pestis CA88-4125]
gi|152959861|gb|ABS47322.1| endonuclease III [Yersinia pseudotuberculosis IP 31758]
gi|162352212|gb|ABX86160.1| endonuclease III [Yersinia pestis Angola]
gi|165913924|gb|EDR32542.1| endonuclease III [Yersinia pestis biovar Orientalis str. IP275]
gi|165920625|gb|EDR37873.1| endonuclease III [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990463|gb|EDR42764.1| endonuclease III [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207872|gb|EDR52352.1| endonuclease III [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961896|gb|EDR57917.1| endonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049671|gb|EDR61079.1| endonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056185|gb|EDR65963.1| endonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169750782|gb|ACA68300.1| endonuclease III [Yersinia pseudotuberculosis YPIII]
gi|186698562|gb|ACC89191.1| endonuclease III [Yersinia pseudotuberculosis PB1/+]
gi|229681067|gb|EEO77162.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis Nepal516]
gi|229688602|gb|EEO80671.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis biovar Orientalis str. India 195]
gi|229694004|gb|EEO84053.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229702019|gb|EEO90040.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Yersinia pestis Pestoides A]
gi|262362152|gb|ACY58873.1| endonuclease III [Yersinia pestis D106004]
gi|262365485|gb|ACY62042.1| endonuclease III [Yersinia pestis D182038]
gi|270339148|gb|EFA49925.1| endonuclease III [Yersinia pestis KIM D27]
gi|294354187|gb|ADE64528.1| endonuclease III [Yersinia pestis Z176003]
gi|320014905|gb|ADV98476.1| endonuclease III [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 213
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+Y K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APG ++VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|251782682|ref|YP_002996985.1| endonuclease III [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391312|dbj|BAH81771.1| endonuclease III [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 222
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ L ++ L + +P KGEL + F L++AV+LSAQ+TD VNK T L+ +
Sbjct: 9 KERLRKVLALIAEMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPALWAKYPEIE 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++N +RTIG+Y+ K++NII + ++ +F ++P+T + L LPG+GRK A
Sbjct: 69 DLASANVTDVENCLRTIGLYKNKAKNIIKTAQAMLTDFGGQVPKTHKELESLPGVGRKTA 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ + +P I VDTH+ R++ R+ + AP ++EQ L+ IP K H+ L+
Sbjct: 129 NVVLAEVYAVPAIAVDTHVSRVAKRLNVSAPDADVTEIEQDLMAKIPKKDWIITHHRLIF 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+ P+C C + CK K
Sbjct: 189 FGRYHCLAKNPKCAICPVQTYCKYYK 214
>gi|313668986|ref|YP_004049270.1| endonuclease III [Neisseria lactamica ST-640]
gi|313006448|emb|CBN87911.1| putative endonuclease III [Neisseria lactamica 020-06]
Length = 209
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 105/205 (51%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF IADT
Sbjct: 1 MNKSIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ ++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 181 LHGRYTCKALKPQCQTCIINDLCEY 205
>gi|294668340|ref|ZP_06733443.1| hypothetical protein NEIELOOT_00252 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309658|gb|EFE50901.1| hypothetical protein NEIELOOT_00252 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 214
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +++F + + P PK EL Y F L++AVLLSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKQTRQKMFERWRAENPHPKTELNYTTPFELLIAVLLSAQATDKGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + + Y +TIG+Y+ KS++II IL+++ ++PQT E L LPG+GRK
Sbjct: 61 PQTMLDLGLEGVMEYTKTIGLYKTKSKHIIETCRILLDKHGGEVPQTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR++NR LAPGK +VE L+++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVANRTNLAPGKNVREVEDKLIKVIPKEFILDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKA+KP C CI+++LC+ +
Sbjct: 181 LHGRYTCKAQKPLCHRCIVNDLCEYKGK 208
>gi|146337321|ref|YP_001202369.1| endonuclease III DNA-(apurinic or apyrimidinic site) lyase
[Bradyrhizobium sp. ORS278]
gi|146190127|emb|CAL74119.1| endonuclease III DNA-(apurinic or apyrimidinic site) lyase
[Bradyrhizobium sp. ORS278]
Length = 277
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 164/228 (71%), Gaps = 3/228 (1%)
Query: 3 SSKKSDSYQGNSPL---GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+ K+ S + +TP E+ E F F+ P PKGEL ++N +TL+VAV+LSA
Sbjct: 48 AKLKAGSVKPVKKAFKATKPWTPMEIREAFSRFAQANPEPKGELEHLNPYTLLVAVVLSA 107
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+TD VNKAT+ LF +ADTPQKMLA+GE +++YI+T+G++R K++N+I+LS LI EF
Sbjct: 108 QATDAGVNKATRPLFAVADTPQKMLALGEDTVRDYIKTVGLFRTKAKNVIALSQKLIAEF 167
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P+T L LPG GRK ANV+L+MAFG T+ VDTH+FR+ NR GLAPGKTP +VE
Sbjct: 168 GGEVPRTRAELESLPGAGRKTANVVLNMAFGEHTMAVDTHVFRVGNRTGLAPGKTPLEVE 227
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L ++IP + +AH+WL+LHGRY C ARKP+C+ C+I +LC+ ++
Sbjct: 228 LGLEKVIPAEFMLHAHHWLILHGRYTCLARKPRCELCLIKDLCRWPEK 275
>gi|260495310|ref|ZP_05815437.1| endonuclease III [Fusobacterium sp. 3_1_33]
gi|260197088|gb|EEW94608.1| endonuclease III [Fusobacterium sp. 3_1_33]
Length = 216
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T +F+ +
Sbjct: 1 MTKKEKVKKILEELEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTDEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ ++PQ ++ LT L G+GR
Sbjct: 61 TPEQFANMKLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEVPQDMDKLTELAGVGR 120
Query: 139 KGANVIL-SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SN IGL + P K+E L++I+P K N ++
Sbjct: 121 KTANVVRGDIWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWINFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 181 LILHGRATCIARRPRCSECEISKYCNYGIKK 211
>gi|332559505|ref|ZP_08413827.1| Endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides WS8N]
gi|332277217|gb|EGJ22532.1| Endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase
[Rhodobacter sphaeroides WS8N]
Length = 214
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 143/212 (67%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + EIF P+GEL +VN +TL+VAV LSAQ+TD VNKAT+ LF
Sbjct: 1 MARQLDYRTIHEIFTRLHALEAEPRGELEHVNAYTLLVAVALSAQATDAGVNKATRALFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP +ML +GE+ L +IRTIG+YR K++N+I+LS +L++ +D ++P + L LPG
Sbjct: 61 QVTTPAEMLELGEEGLTEHIRTIGLYRNKAKNVIALSRLLVDHYDGEVPSSRAALQSLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M F P + VDTHIFR++NR G+APG+ VE++L +P +AH
Sbjct: 121 VGRKTANVVLNMWFHQPAMAVDTHIFRVANRTGIAPGRDVEAVERALEDHVPAPFALHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+WL+LHGRY+C ARKP+C C I +LC ++
Sbjct: 181 HWLILHGRYICVARKPRCGICPIRDLCPYEEK 212
>gi|82703817|ref|YP_413383.1| endonuclease III [Nitrosospira multiformis ATCC 25196]
gi|82411882|gb|ABB75991.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosospira multiformis
ATCC 25196]
Length = 215
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 103/202 (50%), Positives = 148/202 (73%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
EIF F P P EL Y + F L+VAV LSAQ+TD +VN AT+ LF A+TP+ +LA
Sbjct: 7 REIFTRFRAANPHPTTELEYNSPFELLVAVALSAQATDKSVNLATRKLFPKANTPEAILA 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+GE+ L+ YI++IG+Y+ K+ NI++ ILI+++ K+P+T E L +LPG+GRK ANV+L
Sbjct: 67 MGEEALREYIKSIGLYKTKARNILATCRILIDQYGGKVPETREQLEKLPGVGRKTANVLL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG PTI VDTHIFR++NR G+A GK +VE LL+ +P + + +AH+WL+LHGRY+
Sbjct: 127 NTAFGQPTIAVDTHIFRVANRTGIARGKNVLEVESKLLKCVPKEFRQDAHHWLILHGRYI 186
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C ARKP+C C+I++LC+ +
Sbjct: 187 CVARKPKCAICLINDLCEYESK 208
>gi|121997521|ref|YP_001002308.1| endonuclease III [Halorhodospira halophila SL1]
gi|121588926|gb|ABM61506.1| DNA-(apurinic or apyrimidinic site) lyase [Halorhodospira halophila
SL1]
Length = 213
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 101/203 (49%), Positives = 140/203 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E++ P P+ EL Y + L+VAV LSAQSTD +VN+AT+ LF +A+T
Sbjct: 1 MDAEQRHELYRRLREALPEPETELLYETPYELLVAVSLSAQSTDESVNRATRQLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+GE L+ YI+ IG+Y K+ NII+ S LI D ++P+ L LPG+GRK
Sbjct: 61 PEAMLALGEAGLKPYIQHIGLYNNKARNIIAASQQLIEHHDGQVPRDRPALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL++AFG PTI VDTHIFR++NR GLAPGK +VE L + P + +AH+WL+
Sbjct: 121 TANVILNVAFGEPTIAVDTHIFRVANRTGLAPGKNVREVEAGLEAVTPEPFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C AR+P+C +C+I++LC
Sbjct: 181 LHGRYTCTARRPRCGACVIADLC 203
>gi|34541395|ref|NP_905874.1| endonuclease III [Porphyromonas gingivalis W83]
gi|34397712|gb|AAQ66773.1| endonuclease III [Porphyromonas gingivalis W83]
Length = 224
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F+ P + EL Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MRKEERYKAVIDWFAENMPVAETELRYRDPFQLLVAVILSAQCTDKRVNMVTPALFSAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M + L +YI +I K+++++ ++ +L ++F +P + LT+LPG+GR
Sbjct: 61 TAKDMAGSTVEDLLSYIGSISYPNSKAKHLVGMAQMLCSDFGGVVPDEVSELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ +G P + VDTH+FR+S RIGL G K+P + E+ L+R IP AH+W
Sbjct: 121 KTANVIASVVYGKPAMAVDTHVFRVSERIGLTTGSKSPLETERELVRYIPDVLIPKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRYVC ARKP+C C I+ C+ +
Sbjct: 181 LILHGRYVCLARKPKCADCGIAPFCRYYSK 210
>gi|260574862|ref|ZP_05842864.1| endonuclease III [Rhodobacter sp. SW2]
gi|259022867|gb|EEW26161.1| endonuclease III [Rhodobacter sp. SW2]
Length = 214
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 98/202 (48%), Positives = 142/202 (70%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L++IF F P P GEL++ N +TL+VAV+LSAQ+TDV VNKAT+ LF DTPQ
Sbjct: 8 QTLQQIFSRFQALEPEPVGELFHTNAYTLLVAVVLSAQATDVGVNKATRPLFATVDTPQA 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+G L I+TIG+YR+K++N++ LS IL++++ ++P + L LPG+GRK AN
Sbjct: 68 MLALGLDGLTEAIKTIGLYRQKAQNVMRLSQILVDDYGGQVPSSRAALQSLPGVGRKTAN 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L++ + IP VDTHIFR+ NR G+ PG+ VE+++ +P + Q +AH+WL+LHG
Sbjct: 128 VVLNIWWHIPAQAVDTHIFRLGNRTGICPGRDVAAVERAIEDHLPAEFQQHAHHWLILHG 187
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RY+C AR P+C C I +LC
Sbjct: 188 RYICTARNPRCGICPIRDLCPF 209
>gi|320335030|ref|YP_004171741.1| endonuclease III [Deinococcus maricopensis DSM 21211]
gi|319756319|gb|ADV68076.1| endonuclease III [Deinococcus maricopensis DSM 21211]
Length = 224
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
S S P + E+ +P + EL + N F L+VA +LSAQ+TD +
Sbjct: 2 TSRSPAPRVPPAL---RQRATEVLARLQDLYPDARTELAFRNPFELLVATVLSAQATDKS 58
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN AT LF + A + ++ +IRTIG+YR K+ N+++L+ +L+ +P
Sbjct: 59 VNAATPALFAAYPDAFALAAARVEDVEGFIRTIGLYRNKARNLVALAGLLVERHGGDVPN 118
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
+ + LPG GRK ANV+LS AFG P I VDTH+ R++ R+G P+KVE L R+
Sbjct: 119 DFDAVVALPGAGRKTANVVLSNAFGFPAIAVDTHVGRLARRLGFTAETNPDKVEVQLQRL 178
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
P + H+ L+LHGR VC AR+P C +C ++ +C
Sbjct: 179 FPREQWVFLHHALILHGRRVCLARRPVCSACALAAVCP 216
>gi|298290334|ref|YP_003692273.1| endonuclease III [Starkeya novella DSM 506]
gi|296926845|gb|ADH87654.1| endonuclease III [Starkeya novella DSM 506]
Length = 283
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 113/210 (53%), Positives = 157/210 (74%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+T KE+E F F P P+GEL Y + FTL+VAV+LSAQ+TD VNKATK LFE A
Sbjct: 71 KPWTKKEVETAFSRFEEANPHPEGELNYHDPFTLLVAVVLSAQATDAGVNKATKTLFEEA 130
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP +M+A+GE+ + +IRT+G+YR K++N++ LS +LI E D K+P L LPG+G
Sbjct: 131 PTPARMVALGEEGVARHIRTLGLYRGKAKNVVELSRLLIAEHDGKVPPDRAALEALPGVG 190
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L++AF +PTI VDTH+FR++NR GLAPGKTP +VE L R+IP + + +AH+W
Sbjct: 191 RKTANVVLNIAFHMPTIAVDTHLFRVANRTGLAPGKTPLEVELGLERVIPDRFKLHAHHW 250
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+CKA KP+C C+I++LC+ ++
Sbjct: 251 LILHGRYICKALKPECPRCLIADLCRWPEK 280
>gi|253989594|ref|YP_003040950.1| endonuclease III [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253781044|emb|CAQ84206.1| endonuclease iii (dna-(apurinic or apyrimidinic site) lyase)
[Photorhabdus asymbiotica]
Length = 212
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 141/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K + EI P P EL + F L+++VLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNTQKRI-EILTRLRDNNPKPTTELVFTTPFELLISVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG+Y K+EN I +L+ + ++P+ L LPG+GR
Sbjct: 60 TPQAILNLGVDGLKEYIKTIGLYNTKAENTIKTCRMLLEQHAGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK ++VE LLR++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVDEVENKLLRVVPSEFKVDCHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|293608864|ref|ZP_06691167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829437|gb|EFF87799.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121370|gb|ADY80893.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter calcoaceticus PHEA-2]
Length = 224
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 61 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + ++H+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAVGKNVLEVEHRLIKVIPKEFILDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 181 LHGRYCCIARKPKCAECVVADVC 203
>gi|218548771|ref|YP_002382562.1| endonuclease III [Escherichia fergusonii ATCC 35469]
gi|218356312|emb|CAQ88930.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Escherichia fergusonii ATCC 35469]
gi|324113407|gb|EGC07382.1| endonuclease III [Escherichia fergusonii B253]
Length = 211
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQTKRVEILTRLRDNNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + L++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGLKSYIKTIGLFNTKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|144898441|emb|CAM75305.1| EndoIII-related endonuclease [Magnetospirillum gryphiswaldense
MSR-1]
Length = 211
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 104/206 (50%), Positives = 147/206 (71%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP + +E + + P+PK +L YV +TL+VAV+LSAQ+TD+ VNKAT+ LF
Sbjct: 1 MMTPAQADEFYARLAADRPNPKSDLEYVTPYTLLVAVVLSAQATDIGVNKATRPLFAEVR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+A+G +KL+ IRTIG+Y+ K+ N+I+LSHIL+ + ++P+ L LPG+GR
Sbjct: 61 DPASMVALGVEKLEQAIRTIGLYKTKARNVIALSHILLAQHAGQVPEDRAALEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L++AFG PTI VDTH FR+ NR GLAPGK VE+ LL+I P + +AH++L
Sbjct: 121 KTANVVLNVAFGHPTIAVDTHCFRVGNRTGLAPGKNVQAVEEGLLKITPARWGRDAHHYL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+LHGRYVCKARKP C C +++LC+
Sbjct: 181 ILHGRYVCKARKPDCTVCCVNDLCQF 206
>gi|62180041|ref|YP_216458.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62127674|gb|AAX65377.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322714511|gb|EFZ06082.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 211
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C A+KP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIAQKPRCGSCLIEDLCEYKEK 208
>gi|237747776|ref|ZP_04578256.1| endonuclease III [Oxalobacter formigenes OXCC13]
gi|229379138|gb|EEO29229.1| endonuclease III [Oxalobacter formigenes OXCC13]
Length = 213
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 104/203 (51%), Positives = 155/203 (76%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TPK++EE+F F P P+ +L + + + L+VAV+LSAQ+TD++VNKAT+ L+ +A+T
Sbjct: 1 MTPKKIEEMFERFKKANPDPRSDLQFNSPYELLVAVMLSAQATDISVNKATEKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ ++A+G + L++Y++TI +Y KS+NII +S IL+ + D +P E L LPG+GRK
Sbjct: 61 PESIIALGVEGLKSYVKTINLYPTKSKNIIRMSEILLEKHDGDVPADREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF T+ VDTHIFR+SNR GLAPGK +VE+ L+++IPPK+ NAH+WL+
Sbjct: 121 TANVVLNTAFNQMTMAVDTHIFRVSNRTGLAPGKNVLEVEKGLVKVIPPKYMMNAHHWLL 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVCKA+ QC++C+I++LC
Sbjct: 181 LHGRYVCKAKNFQCENCLINDLC 203
>gi|261381000|ref|ZP_05985573.1| endonuclease III [Neisseria subflava NJ9703]
gi|284796031|gb|EFC51378.1| endonuclease III [Neisseria subflava NJ9703]
Length = 209
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQIRQEIFERFRAANPHPTTELSFSSPFELLIAVLLSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR++NR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVANRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQC C+I++LC+
Sbjct: 181 LHGRYTCKALKPQCSKCLINDLCEY 205
>gi|206890497|ref|YP_002248535.1| endonuclease III [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742435|gb|ACI21492.1| endonuclease III [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 210
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ EI ++P+ K L + + L+VA +LSAQ+TD+NVNK T++LF+
Sbjct: 1 MDKKEKVLEIIKRLDKRYPNVKTALNFNSALDLVVATILSAQTTDINVNKVTENLFKKYQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +L+N I++I Y+ K++ I +L+ LI EF+ ++P+T+ L LPG+GR
Sbjct: 61 TADDYANVSLTELENDIKSINFYKNKAKYIKNLAKKLIEEFNGQVPKTMNELVTLPGVGR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L FGI I VDTH+ RIS +GL P+K+EQ L+ I P K+ +
Sbjct: 121 KTANIVLWNVFGINEGIAVDTHVKRISKLLGLTENTDPDKIEQDLMEITPRKYWGKLSHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L++ GR +CKA+ P + C +S++C
Sbjct: 181 LIMLGREICKAKAPNHKICPLSDICPS 207
>gi|114571530|ref|YP_758210.1| endonuclease III [Maricaulis maris MCS10]
gi|114341992|gb|ABI67272.1| endonuclease III [Maricaulis maris MCS10]
Length = 233
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 154/225 (68%), Gaps = 2/225 (0%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S+ K + P G ++ ++ + P PK EL Y N +TL+VAV LSAQ+T
Sbjct: 4 SAAKPKKRKPRQPRG--LNREQAHDLMARLAQDHPDPKTELDYTNPYTLLVAVALSAQAT 61
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VNKAT+ LF+ ADTP+KM+A+GE +++ ++TIG++R K++N+I+LS +LI +
Sbjct: 62 DVGVNKATRLLFQEADTPEKMVALGEDHVRDRVKTIGLFRTKAKNVIALSQLLIERHGGE 121
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P L LPG+GRK ANV+++ AFG+PTI VDTHIFR+SNR LAPGK P VE L
Sbjct: 122 VPADQAALEALPGVGRKTANVVMNEAFGVPTIAVDTHIFRVSNRTRLAPGKDPLAVELRL 181
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+I+P + + AH+WL+LHGRY+CKARKP+C C + ++C+ +
Sbjct: 182 EKIMPDEFRQGAHHWLILHGRYLCKARKPECWRCPVEDICQFKDK 226
>gi|332289784|ref|YP_004420636.1| endonuclease III [Gallibacterium anatis UMN179]
gi|330432680|gb|AEC17739.1| endonuclease III [Gallibacterium anatis UMN179]
Length = 211
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL Y + F L++AV+LSAQ+TDV VNKAT LF IA+T
Sbjct: 1 MNQQKRIEILTRLRDANPHPTTELKYHSVFELLIAVILSAQATDVGVNKATAKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+NYI+TIG+Y K+ENII +LI +++ ++P++ E L LPG+GRK
Sbjct: 61 PQAILDLGVDGLKNYIKTIGLYNSKAENIIKTCRVLIEKYNGEVPESREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR G APGK VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVANRTGFAPGKDVLAVEKKLLKVVPDEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGACLIEDLCEFKDK 208
>gi|197285169|ref|YP_002151041.1| endonuclease III [Proteus mirabilis HI4320]
gi|227355600|ref|ZP_03839994.1| DNA-(apurinic or apyrimidinic site) lyase [Proteus mirabilis ATCC
29906]
gi|194682656|emb|CAR42781.1| endonuclease III [Proteus mirabilis HI4320]
gi|227164207|gb|EEI49100.1| DNA-(apurinic or apyrimidinic site) lyase [Proteus mirabilis ATCC
29906]
Length = 212
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQAKRIEILTRLRDNNPHPTTELRFNSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + +++YI+TIG++ K+EN+I IL+++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLELGVEGIKSYIKTIGLFNTKAENVIKTCQILVDKHHGQVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK N+VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKNVNEVEQKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYTEK 208
>gi|326386039|ref|ZP_08207663.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Novosphingobium nitrogenifigens DSM 19370]
gi|326209264|gb|EGD60057.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Novosphingobium nitrogenifigens DSM 19370]
Length = 230
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ E F+ + P+P+ EL Y N + L+VAV LSAQ+TDV VNKAT+ LFEI T
Sbjct: 1 MKREQIFEFFHRLAEANPAPETELEYGNVYQLLVAVTLSAQATDVGVNKATRRLFEIVKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M+A+GE+ L+ +I+TIG++ K++N+I+LS IL+ E ++P + LT LPG+GRK
Sbjct: 61 PADMIALGEEGLKEHIKTIGLFNSKAKNVIALSEILVREHGGEVPADRDALTALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG T VDTHIFR+ NR GLA GKTP VE+ L + +P + AH+WL+
Sbjct: 121 TANVVLNCAFGAETFAVDTHIFRVCNRTGLAKGKTPLAVEKGLEKKVPKPFRVGAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+CKARKP C+ C + +LC +
Sbjct: 181 LHGRYICKARKPDCERCPVIDLCGYKDK 208
>gi|237740957|ref|ZP_04571438.1| endonuclease III [Fusobacterium sp. 4_1_13]
gi|229431001|gb|EEO41213.1| endonuclease III [Fusobacterium sp. 4_1_13]
Length = 216
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILVELEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IP+ ++ LT L G+GR
Sbjct: 61 TPEQFANMDLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPKDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN IGL + P K+E L++I+P K + ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C +K+
Sbjct: 181 LILHGRATCIARRPKCSECEISKYCNYGVKK 211
>gi|226940145|ref|YP_002795218.1| Endonuclease III [Laribacter hongkongensis HLHK9]
gi|226715071|gb|ACO74209.1| Endonuclease III [Laribacter hongkongensis HLHK9]
Length = 211
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 95/205 (46%), Positives = 135/205 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + PSP+ EL Y F L++AV+LSAQ+TD +VN AT LF +A+T
Sbjct: 1 MNDHKRRQLIARLAEANPSPRTELVYSTPFELLIAVMLSAQATDKSVNAATARLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE L YI+TIG++R K+ + I +L+ ++P T E L LPG+GRK
Sbjct: 61 PEALLMLGEDGLIPYIQTIGLFRSKARHAIDTCRLLLERHAGEVPSTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AF PTI VDTHIFR+ NR LAPG TP VE L +I P +++ + H+WL+
Sbjct: 121 TANVVLNVAFNQPTIAVDTHIFRVCNRTRLAPGSTPLAVELKLEKITPKEYKLDLHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRY C ARKP CQ C+I++LC+
Sbjct: 181 LFGRYTCTARKPHCQQCVINDLCEW 205
>gi|319779235|ref|YP_004130148.1| Endonuclease III [Taylorella equigenitalis MCE9]
gi|317109259|gb|ADU92005.1| Endonuclease III [Taylorella equigenitalis MCE9]
Length = 211
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E IF F + P P+ EL Y N+F L+V+V+LSAQ+TD +VN AT L++ T
Sbjct: 1 MNKQKREIIFERFYKQNPQPQSELNYSNNFQLLVSVILSAQATDKSVNFATTKLWDHIFT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+++ G +K + I+T+G+Y+ K++N+ LI FD ++P T E L L G+GRK
Sbjct: 61 PQQLIDYGFEKFEKQIKTVGLYKTKAKNVFRTCEDLILRFDGEVPSTREELESLAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG+PT+ VDTHIFR++NR G++ GK +VE+ L++ +P K+ ++H+W++
Sbjct: 121 TANVVLNVAFGLPTMAVDTHIFRVANRTGISKGKNVLEVEKGLIKNVPKKYAKDSHHWMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
LHGRY+C+ARKP+C SCII +LC+ KQ
Sbjct: 181 LHGRYICQARKPKCASCIIEDLCEYKFKQ 209
>gi|94309959|ref|YP_583169.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Cupriavidus metallidurans CH34]
gi|93353811|gb|ABF07900.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Cupriavidus metallidurans CH34]
Length = 214
Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 151/208 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +A +
Sbjct: 1 MNSAKCRAIFETLREVNPTPTTELEYSSPFELLIAVLLSAQATDVGVNKATRLLFPVAHS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ++LA+GE L +YI+TIG+Y+ K+++++ IL+ ++D K+P E L LPG+GRK
Sbjct: 61 PQQILALGEAGLIDYIKTIGLYKTKAKHVMETCRILVEKYDGKVPPVREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTHIFR+SNR GLAPGK P+ VEQ LL+++P + ++AH+WL+
Sbjct: 121 TANVVLNVAFGQPTIAVDTHIFRVSNRTGLAPGKNPDAVEQKLLKVVPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C I LC+ ++
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEFKEK 208
>gi|256846729|ref|ZP_05552185.1| endonuclease III [Fusobacterium sp. 3_1_36A2]
gi|256717949|gb|EEU31506.1| endonuclease III [Fusobacterium sp. 3_1_36A2]
Length = 216
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILVELEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IP+ ++ LT L G+GR
Sbjct: 61 TPEQFANMDLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPKDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN +GL + P K+E L++I+P K + ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRLSNLMGLVDSEDPIKIELELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C +K+
Sbjct: 181 LILHGRATCIARRPKCSECEISKYCNYGVKK 211
>gi|317014006|gb|ADU81442.1| endonuclease III [Helicobacter pylori Gambia94/24]
Length = 214
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T + ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 1 MSLKRTKTKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ KS+++I+++ ++ +F IP T + L L G
Sbjct: 61 KYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLINMAQKVVRDFKGVIPSTQKELMSLDG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F + VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 121 VGQKTANVVLSVCFDANYMAVDTHVFRTTHRLGLSNANTPIKTEKELSELF-KDNLSKLH 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 180 HALILFGRYTCKAKNPLCGACFLKEFC 206
>gi|170768898|ref|ZP_02903351.1| endonuclease III [Escherichia albertii TW07627]
gi|170122446|gb|EDS91377.1| endonuclease III [Escherichia albertii TW07627]
Length = 211
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G ++ YI+TIG+Y K+ENII IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVDCVKTYIKTIGLYNSKAENIIKTCRILLKQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208
>gi|329117197|ref|ZP_08245914.1| endonuclease III [Streptococcus parauberis NCFD 2020]
gi|326907602|gb|EGE54516.1| endonuclease III [Streptococcus parauberis NCFD 2020]
Length = 215
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L+++ + + +P KGEL + F L+VAV+LSAQ+TD VNK T L+ +
Sbjct: 5 KARLKQVLAIIAEMFPEAKGELNWETPFQLLVAVILSAQTTDKAVNKITPLLWAKYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++N +RTIG+Y+ K+ NII + ++++FD ++P++ L LPG+GRK A
Sbjct: 65 DLASANLSDVENCLRTIGLYKNKARNIIKTAQEILDKFDGQVPKSHLELETLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L +GIP+I VDTH+ R+S R+ + A ++E+ L+ IP + H+ L+
Sbjct: 125 NVVLGEIYGIPSIAVDTHVARVSKRLNISASDADVTQIEKDLMAKIPKRDWVVTHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY C A+ P+C+ C +++ C K+
Sbjct: 185 FGRYHCLAKNPKCEICPLTSYCVYYKE 211
>gi|115522516|ref|YP_779427.1| endonuclease III [Rhodopseudomonas palustris BisA53]
gi|115516463|gb|ABJ04447.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rhodopseudomonas palustris BisA53]
Length = 264
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 115/231 (49%), Positives = 164/231 (70%), Gaps = 7/231 (3%)
Query: 4 SKKSDSYQGNSP-------LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVL 56
+K + +P ++ E+ E F F P PK EL + N FTL+VAV+
Sbjct: 31 AKSDRVKRPATPGGHFKLRPTKPWSEAEITEAFARFEKASPEPKSELEHFNPFTLLVAVV 90
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
LSAQ+TD VN+AT+ LFEIADTPQKMLA+GE+K++ +I+TIG+YR K+ N+I+LS LI
Sbjct: 91 LSAQATDAGVNRATRPLFEIADTPQKMLALGEEKVREFIKTIGLYRNKARNVIALSQKLI 150
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+F ++P + E L LPG GRK ANV+L++AFG PT+ VDTH+FR++NR GLAPG+TP
Sbjct: 151 EDFGGQVPNSREALETLPGAGRKTANVVLNVAFGQPTMAVDTHVFRVANRTGLAPGETPL 210
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VE L ++IP + +AH+WL+LHGRY C ARKP+C++C+I++LC+ ++
Sbjct: 211 AVELGLEKVIPSRFMAHAHHWLILHGRYTCLARKPRCETCLINDLCRWPEK 261
>gi|157804115|ref|YP_001492664.1| endonuclease III [Rickettsia canadensis str. McKiel]
gi|157785378|gb|ABV73879.1| Endonuclease III [Rickettsia canadensis str. McKiel]
Length = 209
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 108/201 (53%), Positives = 152/201 (75%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF + S P+PK EL Y N+FTL+VAV+LSAQ+TD++VN ATK LF+I DTP+K+L
Sbjct: 6 VNKIFEILSKNNPNPKTELIYKNNFTLLVAVILSAQATDISVNLATKSLFKIYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K +NII+L ILINE+DN +P + + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNIKGKNIIALCKILINEYDNSVPNSFKELVKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++ RIGLA G TP VE+ LL+I+ K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVAKRIGLAQGSTPEVVEKELLQILNKKWLMHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C + C+
Sbjct: 186 ICKARKPDCDICPVKKYCEYY 206
>gi|302343370|ref|YP_003807899.1| endonuclease III [Desulfarculus baarsii DSM 2075]
gi|301639983|gb|ADK85305.1| endonuclease III [Desulfarculus baarsii DSM 2075]
Length = 232
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 120/218 (55%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ +G P+ + I +P+ + L + + + L+VA +LSAQ TD VN
Sbjct: 2 AARGADKAWSRPQPQRVAAILAELDKLYPAAQCALRFADAWQLLVATILSAQCTDERVNM 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T F P + A + +++ IR+ G +R K++ II + ++ ++P ++
Sbjct: 62 VTPEFFARWPGPAQAAAADQAQVEEVIRSTGFFRNKAKAIIGAARAVLERHGGQVPAAMD 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
LT LPG+GRK ANV+L AFG+P I VDTH+ R++ +GL+ P+K+EQ L+ IIP
Sbjct: 122 DLTGLPGVGRKTANVVLGNAFGVPGITVDTHVKRLAGLLGLSDQADPDKIEQQLMEIIPE 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++LHGR VC ARKP+C C ++ C +
Sbjct: 182 ERWTLFSHQMILHGRQVCPARKPRCGQCALAPHCPHGQ 219
>gi|254804417|ref|YP_003082638.1| endonuclease III [Neisseria meningitidis alpha14]
gi|93117261|gb|ABE99548.1| endonuclease III [Neisseria meningitidis]
gi|93117267|gb|ABE99551.1| endonuclease III [Neisseria meningitidis]
gi|93117269|gb|ABE99552.1| endonuclease III [Neisseria meningitidis]
gi|254667959|emb|CBA04215.1| endonuclease III [Neisseria meningitidis alpha14]
gi|308388716|gb|ADO31036.1| endonuclease III [Neisseria meningitidis alpha710]
gi|325133657|gb|EGC56314.1| endonuclease III [Neisseria meningitidis M13399]
Length = 209
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADT
Sbjct: 1 MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ ++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 181 LHGRYTCKALKPQCQTCIINDLCEY 205
>gi|322372789|ref|ZP_08047325.1| endonuclease III [Streptococcus sp. C150]
gi|321277831|gb|EFX54900.1| endonuclease III [Streptococcus sp. C150]
Length = 219
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K + E L +P+ GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 4 SIMLGRKRVNEALALMGEMFPNAHGELEWKTPFQLLVAVILSAQTTDKAVNKITPGLWAR 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+
Sbjct: 64 YPEIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAILMNFDGQVPKTHKELESLPGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV+L+ +GIP+I VDTH+ R+S R+ + T ++E L++ IP + +H
Sbjct: 124 GRKTANVVLAEVYGIPSIAVDTHVSRVSKRLNIVAEDATVEEIEAELMKKIPKRDWIISH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ GRY C A+ P+CQSC + + CK K+
Sbjct: 184 HRMIFFGRYHCLAKNPKCQSCPLQSYCKYYKE 215
>gi|167037142|ref|YP_001664720.1| endonuclease III [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115561|ref|YP_004185720.1| endonuclease III [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855976|gb|ABY94384.1| endonuclease III [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928652|gb|ADV79337.1| endonuclease III [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 213
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 127/206 (61%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF+ TP
Sbjct: 4 TKDEALKVIEILKETYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFKKYKTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++++K+P+TLE L LPG+GRK
Sbjct: 64 EDFLKLTPEELQEEIRECGLYRNKSKSILETCKILKEKYNSKVPETLEELMTLPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ +IP +H+ L+
Sbjct: 124 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFTTEKQLMELIPENLWSLSHHLLIH 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C +++LC K
Sbjct: 184 HGRNLCMARKPKCDECPVNHLCLYFK 209
>gi|261401292|ref|ZP_05987417.1| endonuclease III [Neisseria lactamica ATCC 23970]
gi|269208669|gb|EEZ75124.1| endonuclease III [Neisseria lactamica ATCC 23970]
Length = 209
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 105/205 (51%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF IADT
Sbjct: 1 MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ ++ ++P+ E L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 181 LHGRYTCKALKPQCQTCIINDLCEY 205
>gi|325143839|gb|EGC66154.1| endonuclease III [Neisseria meningitidis M01-240013]
Length = 209
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 103/199 (51%), Positives = 142/199 (71%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ +L
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAILD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK ANV+L
Sbjct: 67 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 127 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 187 CKALKPQCQTCIINDLCEY 205
>gi|302530869|ref|ZP_07283211.1| endonuclease III [Streptomyces sp. AA4]
gi|302439764|gb|EFL11580.1| endonuclease III [Streptomyces sp. AA4]
Length = 253
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 106/194 (54%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+P K EL + N L+VAV+LSAQ+TDV VN T LF T +L
Sbjct: 31 LDEVYPDAKAELDFTNPLELLVAVVLSAQTTDVRVNLVTPALFARYRTAADYAGADRAEL 90
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ Y+RT G +R K+ +++ L L+ + ++P+ L+ L LPG+GRK ANV+L AF +
Sbjct: 91 EEYLRTTGFFRAKANSLMGLGAALVERYGGEVPKKLDDLVTLPGVGRKTANVVLGNAFDV 150
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R G + P KVE ++ +IP K + ++ HGR VC ARKP
Sbjct: 151 PGITVDTHFGRLVRRWGWTAEEDPVKVEHAVGELIPRKEWTMLSHRVIFHGRRVCHARKP 210
Query: 212 QCQSCIISNLCKRI 225
C +C + C
Sbjct: 211 ACGACPLRKDCPSF 224
>gi|117924927|ref|YP_865544.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Magnetococcus sp. MC-1]
gi|117608683|gb|ABK44138.1| DNA-(apurinic or apyrimidinic site) lyase [Magnetococcus sp. MC-1]
Length = 219
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 105/203 (51%), Positives = 141/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E+E IF P PK EL Y N F L+VAV+LSAQSTD VNKAT LF A T
Sbjct: 4 KSKHEIESIFSTLKAANPEPKSELDYRNPFELLVAVVLSAQSTDAGVNKATPGLFAAAPT 63
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ M +GE+ ++ YIRTIG++ K++N+ L+ L+ E D+++PQ+ E L LPG+GRK
Sbjct: 64 PQAMADLGEEGIKPYIRTIGLFNSKAKNLGLLAKKLVAEHDSQVPQSREALQALPGVGRK 123
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTH+FR+SNR+GL KTP E L+++IPP +AH+WL+
Sbjct: 124 TANVVLNVAFGQPTMAVDTHVFRVSNRLGLVSSKTPESTEAPLIKVIPPHFMDHAHHWLI 183
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
L GRY CKARKP C+SC ++ C
Sbjct: 184 LLGRYTCKARKPLCESCSVAQWC 206
>gi|258514113|ref|YP_003190335.1| endonuclease III [Desulfotomaculum acetoxidans DSM 771]
gi|257777818|gb|ACV61712.1| endonuclease III [Desulfotomaculum acetoxidans DSM 771]
Length = 219
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 130/209 (62%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + EI + +P L + N F L+V+V+LSAQSTD VN+ T+ LF+
Sbjct: 1 MSQLKKNRRAAEILKKLAEHYPDATTALNFSNEFELLVSVVLSAQSTDKQVNQVTRELFQ 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP+ + ++L I+ G+YR K+ ++ ++ L++++++++P + L LPG
Sbjct: 61 KYRTPEDFAVLAPEELAEEIKGCGLYRNKAVFLVQIAKQLVSDYNSRVPANRQQLEALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+LS+AFG T+ VDTH+ R++ R+GLA GK + E+ LL +IP + + H
Sbjct: 121 VGRKTANVVLSLAFGQDTLAVDTHVHRVAARLGLASGKNTLQTEKELLDVIPLLQRKDFH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ HGR +CKARKP C SC +S+LC
Sbjct: 181 HRLITHGRKLCKARKPLCSSCFLSDLCPS 209
>gi|90408378|ref|ZP_01216541.1| endonuclease III [Psychromonas sp. CNPT3]
gi|90310541|gb|EAS38663.1| endonuclease III [Psychromonas sp. CNPT3]
Length = 211
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + P P+ EL Y + F L+VAV LSAQ+TDV+VNKAT LF IA+T
Sbjct: 1 MNQLKRVTLLTRLRDQNPHPETELNYSSPFELLVAVTLSAQATDVSVNKATDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A+GE L+ YI+TIG+Y K+ N+I +LI ++ +P+ E L LPG+GRK
Sbjct: 61 AQAIYALGENGLKEYIKTIGLYNTKARNVIKACKMLIELHNSIVPENREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR LA GK ++VEQ LL++IP + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVANRTKLAMGKNVDQVEQKLLKVIPKEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C SCII +LC+
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEY 205
>gi|57234287|ref|YP_181660.1| endonuclease III [Dehalococcoides ethenogenes 195]
gi|57224735|gb|AAW39792.1| endonuclease III [Dehalococcoides ethenogenes 195]
Length = 218
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 118/204 (57%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+ EI S+ +P K L + F ++VA +LSAQSTD +NK T LF+ Q
Sbjct: 7 KKQALEIIKRLSVIYPEAKTALNFTTPFEMLVATILSAQSTDKMINKITPALFKKYPGVQ 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+L+ I++ G + K+ NII + +++ F +P+ + + LPG+GRK A
Sbjct: 67 AFADASLAELEQDIKSSGFFHNKALNIIGAARAVVSRFGGDVPRNMADMLTLPGVGRKTA 126
Query: 142 NVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L AFG + I VDTH+ R++ R+GL+ P K+EQ L+ +IP N Y+L+
Sbjct: 127 NVVLHNAFGLVEGIAVDTHVKRLAGRLGLSTNTDPVKIEQDLMALIPRSEWGNFSYYLID 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC A+KP+C C+++++C
Sbjct: 187 HGRAVCDAKKPRCPECVLNDICPS 210
>gi|261378233|ref|ZP_05982806.1| endonuclease III [Neisseria cinerea ATCC 14685]
gi|269145310|gb|EEZ71728.1| endonuclease III [Neisseria cinerea ATCC 14685]
Length = 209
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 142/199 (71%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK ANV+L
Sbjct: 67 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 127 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 187 CKALKPQCQTCIINDLCEY 205
>gi|312888364|ref|ZP_07747940.1| endonuclease III [Mucilaginibacter paludis DSM 18603]
gi|311299198|gb|EFQ76291.1| endonuclease III [Mucilaginibacter paludis DSM 18603]
Length = 253
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ P+ FS P + EL+Y N F L++AV+LSAQ TD +N+ T LFE
Sbjct: 1 MLKPERYRHFVEYFSKHQPIAETELHYSNPFELLIAVILSAQCTDKRINQVTPPLFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ YIR++ K+++++ ++ +L++ F+ ++P + L ++PG+GR
Sbjct: 61 TPESLAASSAEEVFTYIRSVSYPNNKAKHLVGMAKMLVDVFNGEVPSDINELQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P I VDTH+FR+SNR+GL TP VE+ L++ +P AH+W
Sbjct: 121 KTANVIASVVYDAPAIAVDTHVFRVSNRLGLTTNANTPLAVEKQLVKYLPQNTLAIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+C AR P+C C ++ CK ++
Sbjct: 181 LILHGRYICVARSPKCDICPLTWFCKYYER 210
>gi|319941589|ref|ZP_08015915.1| endonuclease III [Sutterella wadsworthensis 3_1_45B]
gi|319804959|gb|EFW01801.1| endonuclease III [Sutterella wadsworthensis 3_1_45B]
Length = 250
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 142/209 (67%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+++ K E + P+PK EL Y F L+VAV+LSAQ+TD VN AT LF +A+
Sbjct: 1 MFSAKNREPFMAALAALNPNPKSELNYSTPFELLVAVMLSAQATDKGVNLATAKLFPVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQK+L +G L Y++TI +YR K++++I ILI+ F ++P+T + L LPG+GR
Sbjct: 61 TPQKILDLGLDGLIPYVQTINLYRTKAQHLIEACRILIDRFHGEVPRTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV++++AFG P I VDTHIFR+ NR G APGK P +VE+ LL+++P + NAH+WL
Sbjct: 121 KTANVVMNVAFGEPAIAVDTHIFRVCNRTGFAPGKNPTEVEEKLLKVVPKDYLLNAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+L GRY+CKAR P+C C ++ C ++
Sbjct: 181 LLFGRYICKARNPECVRCPVAEYCSAPEK 209
>gi|271500640|ref|YP_003333665.1| endonuclease III [Dickeya dadantii Ech586]
gi|270344195|gb|ACZ76960.1| endonuclease III [Dickeya dadantii Ech586]
Length = 211
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNKEKRIAILSRLRDNNPHPTTELAFNSPFELLISVLLSAQATDVSVNKATAKLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + ++ YI+TIG++ K+ENII IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAMLDLGVEGVKAYIKTIGLFNSKAENIIKTCRILLEQHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK ++E+ LL+ +P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKNVEQIEEKLLKYVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGACLIEDLCEYKEK 208
>gi|256828392|ref|YP_003157120.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
gi|256577568|gb|ACU88704.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
Length = 222
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + ++P P+ EL + + L+VA +LSAQ TD VN T LF T ++
Sbjct: 8 ARARAVRERLARRYPRPRTELSWSTPWELLVATILSAQCTDARVNMVTPKLFATWRTVEQ 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M ++++ IR+ G +R K++N+ + + ++ F ++P+T+E + L G+ RK AN
Sbjct: 68 MATADPAQIESVIRSTGFFRNKAKNLHASAVRIVTHFGGQVPRTMEEMLTLAGVARKTAN 127
Query: 143 VILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+LS A+G I VDTH+ RIS R+GL P+KVEQ LL++ P + +++LVL
Sbjct: 128 VVLSNAYGVHAGIAVDTHVKRISFRLGLTRQTNPDKVEQDLLKLFPQESWGAVNHYLVLF 187
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GR VC ARKP C +C +++LC R
Sbjct: 188 GREVCAARKPLCDACELADLCPR 210
>gi|298369900|ref|ZP_06981216.1| endonuclease III [Neisseria sp. oral taxon 014 str. F0314]
gi|298281360|gb|EFI22849.1| endonuclease III [Neisseria sp. oral taxon 014 str. F0314]
Length = 210
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +A T
Sbjct: 1 MNKRIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVAAT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ ++ ++P L LPG+GRK
Sbjct: 61 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYHGEVPADRSALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFVPKEFLMDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQC++CII++LC+
Sbjct: 181 LHGRYTCKALKPQCKTCIINDLCEY 205
>gi|167835948|ref|ZP_02462831.1| endonuclease III [Burkholderia thailandensis MSMB43]
Length = 214
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIFETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YIRTIG+YR K++N+++ S IL+ +D ++P E L LPG+GRK
Sbjct: 61 PKRIVALGEEGVADYIRTIGLYRTKAKNVVAASRILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|15676439|ref|NP_273578.1| endonuclease III [Neisseria meningitidis MC58]
gi|121634328|ref|YP_974573.1| endonuclease III [Neisseria meningitidis FAM18]
gi|296315130|ref|ZP_06865071.1| endonuclease III [Neisseria polysaccharea ATCC 43768]
gi|7225758|gb|AAF40962.1| endonuclease III [Neisseria meningitidis MC58]
gi|93117257|gb|ABE99546.1| endonuclease III [Neisseria meningitidis H44/76]
gi|93117259|gb|ABE99547.1| endonuclease III [Neisseria meningitidis]
gi|120866034|emb|CAM09772.1| putative endonuclease III [Neisseria meningitidis FAM18]
gi|296838051|gb|EFH21989.1| endonuclease III [Neisseria polysaccharea ATCC 43768]
gi|316985389|gb|EFV64337.1| endonuclease III [Neisseria meningitidis H44/76]
gi|325127633|gb|EGC50549.1| endonuclease III [Neisseria meningitidis N1568]
gi|325131667|gb|EGC54372.1| endonuclease III [Neisseria meningitidis M6190]
gi|325135877|gb|EGC58489.1| endonuclease III [Neisseria meningitidis M0579]
gi|325137683|gb|EGC60260.1| endonuclease III [Neisseria meningitidis ES14902]
gi|325139732|gb|EGC62266.1| endonuclease III [Neisseria meningitidis CU385]
gi|325197745|gb|ADY93201.1| endonuclease III [Neisseria meningitidis G2136]
gi|325200779|gb|ADY96234.1| endonuclease III [Neisseria meningitidis H44/76]
gi|325202678|gb|ADY98132.1| endonuclease III [Neisseria meningitidis M01-240149]
gi|325203624|gb|ADY99077.1| endonuclease III [Neisseria meningitidis M01-240355]
gi|325206615|gb|ADZ02068.1| endonuclease III [Neisseria meningitidis M04-240196]
gi|325207576|gb|ADZ03028.1| endonuclease III [Neisseria meningitidis NZ-05/33]
Length = 209
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 142/199 (71%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK ANV+L
Sbjct: 67 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 127 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 187 CKALKPQCQTCIINDLCEY 205
>gi|304388244|ref|ZP_07370364.1| endonuclease III [Neisseria meningitidis ATCC 13091]
gi|304337771|gb|EFM03920.1| endonuclease III [Neisseria meningitidis ATCC 13091]
Length = 209
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 103/199 (51%), Positives = 141/199 (70%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L L G+GRK ANV+L
Sbjct: 67 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLLGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 127 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 187 CKALKPQCQTCIINDLCEY 205
>gi|332284975|ref|YP_004416886.1| A/G-specific adenine glycosylase [Pusillimonas sp. T7-7]
gi|330428928|gb|AEC20262.1| A/G-specific adenine glycosylase [Pusillimonas sp. T7-7]
Length = 210
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 134/205 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P P EL Y + F L++AV+LSAQ+TD +VN AT+ F T
Sbjct: 1 MNIAKRTEIFQRLQAANPKPTTELEYSSTFQLLIAVILSAQATDKSVNLATRKFFPDHGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+ E L YI+TIG+Y+ K+ N+I +L+ ++P+ E L LPG+GRK
Sbjct: 61 PAGLLALSETGLAEYIKTIGLYKTKARNVIMTCQMLLERHGGEVPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR G+APGKT +VE+ L ++IP NAH+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVANRTGIAPGKTVLEVERKLNKVIPKPFLLNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP+C C IS+LC
Sbjct: 181 LHGRYVCVARKPKCPQCGISDLCDY 205
>gi|304436727|ref|ZP_07396695.1| endonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370207|gb|EFM23864.1| endonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 210
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 88/198 (44%), Positives = 128/198 (64%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
E + +P+ K L + F L++AV+LSAQ TD VN T LF A+TP + A+
Sbjct: 10 EQLRILRSLYPNAKPALTFQTPFELLIAVILSAQCTDARVNVVTGRLFPKANTPAAIAAL 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
G+ L+ I G +R K+++II HIL+N++ ++P E L +LPG+GRK ANV++S
Sbjct: 70 GQAALEAEIHDCGFFRMKAKHIIETCHILLNDYGGEVPADFEALQKLPGVGRKTANVVMS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AF P I VDTH+FR++NR+ LA G TP +VE+ L + IP +AH+WL+LHGR VC
Sbjct: 130 VAFHTPAIAVDTHVFRVANRLRLAVGTTPLEVEKGLQKAIPRADWSDAHHWLILHGRQVC 189
Query: 207 KARKPQCQSCIISNLCKR 224
KARKP C +C ++ +C
Sbjct: 190 KARKPHCDTCALAAVCPS 207
>gi|227824875|ref|ZP_03989707.1| endonuclease III [Acidaminococcus sp. D21]
gi|226905374|gb|EEH91292.1| endonuclease III [Acidaminococcus sp. D21]
Length = 211
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 127/206 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + L+Y F L+VAV+LSAQ TD VN TK LF +
Sbjct: 2 MRKKERNKLILERLEETYKGQGTALHYTTPFELLVAVILSAQCTDERVNIVTKRLFPKYN 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+K+ A+ ++++ I G+Y K+ NI++ LI++F ++IPQ ++ L LPG+GR
Sbjct: 62 TPEKLGALTLEQMEALIHDCGLYHSKARNILATCRKLIDDFHSEIPQEMKALLSLPGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+LS+AFG P I VDTH+FR+S+R+GL+ GK P + E L + IP + AH+WL
Sbjct: 122 KTADVMLSVAFGKPAIAVDTHVFRVSHRLGLSAGKDPLETEHDLQKQIPKEKWGEAHHWL 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR VCKA P+C C + +LC
Sbjct: 182 IWHGRKVCKAPNPRCSECPVLDLCPS 207
>gi|332187405|ref|ZP_08389143.1| endonuclease III [Sphingomonas sp. S17]
gi|332012566|gb|EGI54633.1| endonuclease III [Sphingomonas sp. S17]
Length = 222
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E ++ + P P+ EL + N +TL+VAV LSAQ+TD+ VNKAT+ LF DT
Sbjct: 1 MKKADIVEFYHRLAEANPHPETELEFRNPYTLVVAVALSAQATDIGVNKATRALFAEVDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KMLA+GE L+ +I+TIG++ K++N+I+LS +L++++ ++P E L RLPG+GRK
Sbjct: 61 PEKMLALGEDGLKAHIKTIGLFNTKAKNVIALSQMLVDDYGGEVPADREALERLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG T VDTHIFR+ NR GLA GKTP VE L + P + +AH+WL+
Sbjct: 121 TANVVLNVAFGHETFAVDTHIFRVCNRTGLAKGKTPLAVELKLDKATPAPFRVHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+CKAR+P+C C + +LC
Sbjct: 181 LHGRYICKARRPECWRCPVEDLCAY 205
>gi|332968415|gb|EGK07482.1| endonuclease III [Kingella kingae ATCC 23330]
Length = 209
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 99/202 (49%), Positives = 138/202 (68%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+E+F + P P EL + N F L++AVLLSAQ+TDV VNKAT LF +A+TPQ ML
Sbjct: 7 KEMFQRWREANPKPTTELNFSNPFELLIAVLLSAQATDVGVNKATAKLFPVANTPQAMLD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+YR KS++I+ IL+ + ++PQT E L LPG+GRK ANV+L
Sbjct: 67 LGLDGIMEYTKTIGLYRTKSKHIVETCQILLAKHGGEVPQTREELEALPGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AF + VDTHIFR++NR LA GK +VE L+++IP + +AH+WL+LHGRY
Sbjct: 127 NTAFRQLAMAVDTHIFRVANRTKLATGKNVREVEDKLMKVIPKEFLLDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
CKA+KPQC C+I +LC+ +
Sbjct: 187 CKAQKPQCGKCLIYDLCEYGAK 208
>gi|53718738|ref|YP_107724.1| endonuclease III [Burkholderia pseudomallei K96243]
gi|53725522|ref|YP_103525.1| endonuclease III [Burkholderia mallei ATCC 23344]
gi|67643799|ref|ZP_00442542.1| endonuclease III [Burkholderia mallei GB8 horse 4]
gi|76811187|ref|YP_332746.1| endonuclease III [Burkholderia pseudomallei 1710b]
gi|121598356|ref|YP_992362.1| endonuclease III [Burkholderia mallei SAVP1]
gi|124386556|ref|YP_001026833.1| endonuclease III [Burkholderia mallei NCTC 10229]
gi|126440005|ref|YP_001058224.1| endonuclease III [Burkholderia pseudomallei 668]
gi|126450130|ref|YP_001079880.1| endonuclease III [Burkholderia mallei NCTC 10247]
gi|126451469|ref|YP_001065462.1| endonuclease III [Burkholderia pseudomallei 1106a]
gi|134281309|ref|ZP_01768018.1| endonuclease III [Burkholderia pseudomallei 305]
gi|166999901|ref|ZP_02265730.1| endonuclease III [Burkholderia mallei PRL-20]
gi|167718711|ref|ZP_02401947.1| endonuclease III [Burkholderia pseudomallei DM98]
gi|167737724|ref|ZP_02410498.1| endonuclease III [Burkholderia pseudomallei 14]
gi|167814881|ref|ZP_02446561.1| endonuclease III [Burkholderia pseudomallei 91]
gi|167823328|ref|ZP_02454799.1| endonuclease III [Burkholderia pseudomallei 9]
gi|167844879|ref|ZP_02470387.1| endonuclease III [Burkholderia pseudomallei B7210]
gi|167893413|ref|ZP_02480815.1| endonuclease III [Burkholderia pseudomallei 7894]
gi|167901875|ref|ZP_02489080.1| endonuclease III [Burkholderia pseudomallei NCTC 13177]
gi|167910107|ref|ZP_02497198.1| endonuclease III [Burkholderia pseudomallei 112]
gi|167918136|ref|ZP_02505227.1| endonuclease III [Burkholderia pseudomallei BCC215]
gi|217419458|ref|ZP_03450964.1| endonuclease III [Burkholderia pseudomallei 576]
gi|226194383|ref|ZP_03789981.1| endonuclease III [Burkholderia pseudomallei Pakistan 9]
gi|237811473|ref|YP_002895924.1| endonuclease III [Burkholderia pseudomallei MSHR346]
gi|242318004|ref|ZP_04817020.1| endonuclease III [Burkholderia pseudomallei 1106b]
gi|254175502|ref|ZP_04882162.1| endonuclease III [Burkholderia mallei ATCC 10399]
gi|254190653|ref|ZP_04897160.1| endonuclease III [Burkholderia pseudomallei Pasteur 52237]
gi|254207542|ref|ZP_04913892.1| endonuclease III [Burkholderia mallei JHU]
gi|254257990|ref|ZP_04949044.1| endonuclease III [Burkholderia pseudomallei 1710a]
gi|254298436|ref|ZP_04965888.1| endonuclease III [Burkholderia pseudomallei 406e]
gi|254359955|ref|ZP_04976225.1| endonuclease III [Burkholderia mallei 2002721280]
gi|52209152|emb|CAH35096.1| endonuclease III [Burkholderia pseudomallei K96243]
gi|52428945|gb|AAU49538.1| endonuclease III [Burkholderia mallei ATCC 23344]
gi|76580640|gb|ABA50115.1| endonuclease III [Burkholderia pseudomallei 1710b]
gi|121227166|gb|ABM49684.1| endonuclease III [Burkholderia mallei SAVP1]
gi|124294576|gb|ABN03845.1| endonuclease III [Burkholderia mallei NCTC 10229]
gi|126219498|gb|ABN83004.1| endonuclease III [Burkholderia pseudomallei 668]
gi|126225111|gb|ABN88651.1| endonuclease III [Burkholderia pseudomallei 1106a]
gi|126243000|gb|ABO06093.1| endonuclease III [Burkholderia mallei NCTC 10247]
gi|134247615|gb|EBA47700.1| endonuclease III [Burkholderia pseudomallei 305]
gi|147751436|gb|EDK58503.1| endonuclease III [Burkholderia mallei JHU]
gi|148029195|gb|EDK87100.1| endonuclease III [Burkholderia mallei 2002721280]
gi|157808285|gb|EDO85455.1| endonuclease III [Burkholderia pseudomallei 406e]
gi|157938328|gb|EDO93998.1| endonuclease III [Burkholderia pseudomallei Pasteur 52237]
gi|160696546|gb|EDP86516.1| endonuclease III [Burkholderia mallei ATCC 10399]
gi|217396762|gb|EEC36778.1| endonuclease III [Burkholderia pseudomallei 576]
gi|225933468|gb|EEH29457.1| endonuclease III [Burkholderia pseudomallei Pakistan 9]
gi|237502706|gb|ACQ95024.1| endonuclease III [Burkholderia pseudomallei MSHR346]
gi|238525237|gb|EEP88665.1| endonuclease III [Burkholderia mallei GB8 horse 4]
gi|242141243|gb|EES27645.1| endonuclease III [Burkholderia pseudomallei 1106b]
gi|243064026|gb|EES46212.1| endonuclease III [Burkholderia mallei PRL-20]
gi|254216679|gb|EET06063.1| endonuclease III [Burkholderia pseudomallei 1710a]
Length = 214
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIFETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K++A+GE+ + +YI+TIG+YR K++N+++ S IL+ ++ ++P E L LPG+GRK
Sbjct: 61 PKKIVALGEEGVADYIKTIGLYRTKAKNVVAASRILLEQYGGEVPAEREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L ++ P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKLTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|315924136|ref|ZP_07920362.1| endonuclease III [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622538|gb|EFV02493.1| endonuclease III [Pseudoramibacter alactolyticus ATCC 23263]
Length = 231
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 128/203 (63%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E E++ L + K L + + F L++A +LSAQ TDV VN T L++ +T
Sbjct: 1 MNRAEREKVLELLQEHYGDQKCGLDHTSPFELLIATMLSAQCTDVRVNIVTAELYKEHNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L++GE L I+T G+ K++NII H L+ FD K+P+T+ LT LPG+GRK
Sbjct: 61 PETILSLGEAGLLERIKTCGLANTKAKNIIKTCHRLLENFDGKVPKTMAELTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++S AFGIP I VDTH+FR+SNR+GL GK +VE++L + IP AH+ L+
Sbjct: 121 TANVVMSNAFGIPAIAVDTHVFRVSNRLGLGKGKNVTEVERALQKNIPKSRWSAAHHQLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
HGR +C AR P+C C +++ C
Sbjct: 181 WHGRKICSARNPKCDICPLADYC 203
>gi|124003281|ref|ZP_01688131.1| endonuclease III [Microscilla marina ATCC 23134]
gi|123991379|gb|EAY30810.1| endonuclease III [Microscilla marina ATCC 23134]
Length = 220
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F+ P P+ EL Y + L+VAV+LSAQ TD VN T LF+
Sbjct: 1 MRRAERYEQLINYFTENLPEPETELSYRTPYELLVAVILSAQCTDKRVNMVTPALFDKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +L YIR+I K+++++ ++ +L+++F+++IP T+ L +LPG+GR
Sbjct: 61 TPELLKESNFDELFPYIRSISYPNNKTKHLLGMAKMLVDDFNSEIPSTVAELQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ + PT+ VDTH+FR+S R+GL TP +VE++L++ IP + AH+
Sbjct: 121 KTANVIASVIYNKPTMAVDTHVFRVSKRLGLVNQNLKTPLEVEKTLVKYIPEELIPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRYVC AR P+C C ++NLC+ +
Sbjct: 181 WLILHGRYVCVARAPKCGECNLTNLCRYYDK 211
>gi|19745991|ref|NP_607127.1| endonuclease III (DNA repair) [Streptococcus pyogenes MGAS8232]
gi|19748153|gb|AAL97626.1| putative endonuclease III (DNA repair) [Streptococcus pyogenes
MGAS8232]
Length = 218
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++ +
Sbjct: 5 KARLAKVLIIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVNKVTPGLWQSYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + + ++F ++P+T + L LPG+GRK A
Sbjct: 65 DLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ +G+P I VDTH+ R+S R+ ++ ++E L+ IP K H+ L+
Sbjct: 125 NVVLAEVYGVPAIAVDTHVARVSKRLNISSPDADVKQIEADLMAKIPKKDWIITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GRY C A+KP+C+ C + + CK +
Sbjct: 185 FGRYHCLAKKPKCEICPVQSYCKYYQ 210
>gi|313890218|ref|ZP_07823853.1| endonuclease III [Streptococcus pseudoporcinus SPIN 20026]
gi|313121579|gb|EFR44683.1| endonuclease III [Streptococcus pseudoporcinus SPIN 20026]
Length = 216
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L+ T +
Sbjct: 5 RDKLRQVLTIIGQMFPEAKGELDWDTPFHLLIAVILSAQTTDKAVNKITPALWAKYPTIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + +++ +FD IP+T + L LPG+GRK A
Sbjct: 65 DLANADLTDVENSLRTIGLYKNKAKNIIKTAQLILADFDGHIPKTHKELEGLPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L +GIP+I VDTH+ R++ R+ ++ ++E L++ +P K H+ L+
Sbjct: 125 NVVLGEVYGIPSIAVDTHVARVAKRLNISNQDAGVAEIEADLMKKVPKKDWVITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY C A+KP+C+ C + + C K+
Sbjct: 185 FGRYHCLAKKPKCEICPLQSYCLYYKE 211
>gi|296117484|ref|ZP_06836071.1| endonuclease III [Gluconacetobacter hansenii ATCC 23769]
gi|295976005|gb|EFG82796.1| endonuclease III [Gluconacetobacter hansenii ATCC 23769]
Length = 235
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 139/219 (63%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
+ + G P T E+ + P + EL +V+ FTL+V+V+LSAQ+TD +
Sbjct: 2 TTPARPGPRPARRAMTRAEVRTFIEQLAAANPEARSELNFVDDFTLLVSVVLSAQATDAS 61
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN+AT LF A P M+A+GE+K+ +IR+IG++R K+ N+++LS L++ F +P
Sbjct: 62 VNRATAGLFTDAPDPAAMVALGEEKVGAHIRSIGLWRTKARNVVALSQQLLDRFGGMVPH 121
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
L LPG+GRK ANV++++AFG T+ VDTHIFR+ NR GLAPG TP VE+ L++
Sbjct: 122 DRTALESLPGVGRKTANVVMNIAFGDSTMAVDTHIFRLGNRTGLAPGTTPRAVEEQLVKR 181
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
IP AH+WL+L GRYVCKARKP+C C C+
Sbjct: 182 IPADMLRPAHHWLILQGRYVCKARKPECWRCPAFAPCQY 220
>gi|54309727|ref|YP_130747.1| putative endonuclease III [Photobacterium profundum SS9]
gi|46914165|emb|CAG20945.1| Putative endonuclease III [Photobacterium profundum SS9]
Length = 213
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +I + P P+ EL + + F L++AVLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNNQKRTQILERLRAENPHPETELKWSSPFELLIAVLLSAQATDVSVNKATDKLYPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + ++ YI+TIG++ K+EN+I IL+N+ + +IP+ E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGVKTYIKTIGLFNSKAENVIKTCKILLNKHNGEIPEDREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VE+ LL+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDQVEEKLLKVVPTEFKVDVHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|332799445|ref|YP_004460944.1| endonuclease III [Tepidanaerobacter sp. Re1]
gi|332697180|gb|AEE91637.1| endonuclease III [Tepidanaerobacter sp. Re1]
Length = 228
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 124/208 (59%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + I S +P L + + F L++A +LSAQ TD VNK T+ LF+
Sbjct: 12 KERERITAIISKLSKLYPEATTALNHSSPFELLIATILSAQCTDKRVNKVTERLFKKYKG 71
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +L+ I+ GI++ KS+NII S IL +++ ++P + L LPG+GRK
Sbjct: 72 PKDFAEANKSELEQDIKECGIFKNKSKNIIETSKILFEKYNGQVPSNFDELIELPGVGRK 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P VDTH++R+++R+G + K +VE+ L IP AH+WL+
Sbjct: 132 TANVVLANAFGKPAFAVDTHVYRLAHRLGFSDKKNLIEVERDLREKIPENLWIKAHHWLI 191
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C+ARKP C C++S+LC + ++
Sbjct: 192 YHGRNICRARKPLCDECLLSDLCLKFQK 219
>gi|325497179|gb|EGC95038.1| endonuclease III [Escherichia fergusonii ECD227]
Length = 205
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/201 (48%), Positives = 141/201 (70%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+TP ML +
Sbjct: 2 EILTRLRDNNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLEL 61
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
G + L++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK ANV+L+
Sbjct: 62 GVEGLKSYIKTIGLFNTKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRKTANVVLN 121
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+LHGRY C
Sbjct: 122 TAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTC 181
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
ARKP+C SCII +LC+ ++
Sbjct: 182 IARKPRCGSCIIEDLCEYKEK 202
>gi|119510131|ref|ZP_01629270.1| Endonuclease III/Nth [Nodularia spumigena CCY9414]
gi|119465192|gb|EAW46090.1| Endonuclease III/Nth [Nodularia spumigena CCY9414]
Length = 232
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI +P L Y L+VA +LSAQ TD VNK T LF
Sbjct: 18 KQRALEILARLQRLYPDATCSLNYSTPVQLLVATILSAQCTDERVNKVTPALFARFPDAA 77
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++L+N +R+ G YR K++NI +++EFD+ +P +E L +LPG+ RK
Sbjct: 78 SLANADLEELENLVRSTGFYRNKAKNIQGACQKIVSEFDSVVPNQMEQLLQLPGVARKTG 137
Query: 142 NVILSMAFGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ A+GI DTH+ R+S R+GL P ++E+ L++++P N L+
Sbjct: 138 NVVLAHAYGINAGVTVDTHVKRLSQRLGLTKFPDPIRIEKDLIKLLPQPDWENWSIRLIY 197
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR VCKAR P C++C +S+LC +
Sbjct: 198 HGRAVCKARSPLCEACELSDLCPSAGK 224
>gi|78067138|ref|YP_369907.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Burkholderia sp. 383]
gi|77967883|gb|ABB09263.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Burkholderia sp. 383]
Length = 214
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ IL++ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVTEYIKTIGLYRTKAKNVVATCRILLDRYDGEVPADREALEGLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C+I LC+
Sbjct: 181 LHGRYVCKARKPECWHCVIEPLCEF 205
>gi|251789761|ref|YP_003004482.1| endonuclease III [Dickeya zeae Ech1591]
gi|247538382|gb|ACT07003.1| endonuclease III [Dickeya zeae Ech1591]
Length = 211
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P EL + + F L+++VLLSAQ+TDV+VNKAT+ L+ +A+T
Sbjct: 1 MNKAKRIAILSRLRDNNPHPTTELKFNSPFELLISVLLSAQATDVSVNKATEKLYSVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ MLA+G +++YI+TIG++ K+ENII IL+++ ++P+ L LPG+GRK
Sbjct: 61 PQAMLALGVDGVKSYIKTIGLFNGKAENIIKTCRILLDKHQGQVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+ +P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKNVEQVEEKLLKYVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C +C+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGACLIEDLCEYKEK 208
>gi|304439856|ref|ZP_07399750.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371595|gb|EFM25207.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 210
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 128/209 (61%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + K+ E+ + + +P K EL Y F L+VA +LSAQ TDV VN TK LF+
Sbjct: 2 RILSKKKTAEVIEILNKTYPDAKCELNYSTPFELLVATILSAQCTDVRVNMVTKELFKKY 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+TPQ+ +G ++ ++T G YR K+ +I S ++I+E+ ++P T+E L +LPG+G
Sbjct: 62 NTPQQFEELGATSIEPLVKTCGFYRNKARSIYGASKMIIDEYGGEVPNTIEELVKLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
+K ANV+ S FGIP I VDTH+FR++NRIG+ KTP K E++L++ I AH+
Sbjct: 122 KKTANVVASNCFGIPAIAVDTHVFRVTNRIGIVNEKTPEKTEEALMKRIDKNMWTKAHHL 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ HGR C AR P C C + C IK
Sbjct: 182 IIFHGRRRCMARNPDCGLCEVREYCNWIK 210
>gi|163841494|ref|YP_001625899.1| endonuclease III [Renibacterium salmoninarum ATCC 33209]
gi|162954970|gb|ABY24485.1| endonuclease III [Renibacterium salmoninarum ATCC 33209]
Length = 274
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/214 (35%), Positives = 117/214 (54%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
L +I + + +P EL + N F L+VA +LSAQ+TDV VN+ +
Sbjct: 5 PKMAESQLALKPRARKINRILAESYPYAHAELDFRNPFELLVATVLSAQTTDVRVNQISP 64
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF P + +L+ IR G +R K++++I L++ +++E+D +P TL+ L
Sbjct: 65 MLFRRYPDPVSLSQAESLELEEIIRPTGFFRAKAKSLIGLANRIVDEYDGVVPGTLDELI 124
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+GRK ANV+L AFGIP I VDTH R++ R G + P VE + +I P
Sbjct: 125 TLPGVGRKTANVVLGNAFGIPGITVDTHFGRLARRFGWTDSEDPGVVESDVGELIEPVDW 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +V HGR VC +RKP C +C +++LC
Sbjct: 185 TMLSHRVVFHGRRVCHSRKPACGACTVASLCPSY 218
>gi|294784441|ref|ZP_06749732.1| endonuclease III [Fusobacterium sp. 3_1_27]
gi|294488013|gb|EFG35368.1| endonuclease III [Fusobacterium sp. 3_1_27]
Length = 216
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILIELEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IP+ ++ LT L G+GR
Sbjct: 61 TPEQFANMELEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPKDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN IGL + P K+E L++I+P K + ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 181 LILHGRATCIARRPKCSECEISKYCNYGIKK 211
>gi|297564572|ref|YP_003683544.1| endonuclease III [Meiothermus silvanus DSM 9946]
gi|296849021|gb|ADH62036.1| endonuclease III [Meiothermus silvanus DSM 9946]
Length = 237
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 116/216 (53%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
S + + I +P EL + N F L+VA +LSAQ+TD +VNK
Sbjct: 18 SATPCPKESRRAKKERAQRILAALEQHYPGAASELAHRNPFELLVATVLSAQATDASVNK 77
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF + +++ +IR+IG+YR K+ N+++L+ L+ + ++PQ +
Sbjct: 78 ATPALFARYPDAHALAQATPEEVAPFIRSIGLYRSKARNLVALAQKLVEKHGGEVPQDKQ 137
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L RLPG+G K A V+L AFG+P I VDTH+ R+S R+ + K P ++ L P
Sbjct: 138 ALMRLPGVGWKTATVVLGAAFGVPGIAVDTHLMRLSRRLCFSQAKDPEQIGAELESYFPR 197
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ H+ L+LHGRYVC ARKP C+ C I C
Sbjct: 198 EKWVFTHHALILHGRYVCTARKPACERCPIYAYCPS 233
>gi|171463231|ref|YP_001797344.1| endonuclease III [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192769|gb|ACB43730.1| endonuclease III [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 226
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 144/209 (68%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ F P P+ EL Y + F L++AVLLSAQ+TDV+VNK T+ L+++A+
Sbjct: 1 MMNLEKRRAFFEQLKANNPKPETELEYSSPFELLIAVLLSAQATDVSVNKGTRKLYKVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +GE+ ++ YI+ IG++ K ++I +L+++ ++PQT E L LPG+GR
Sbjct: 61 TPQALLDLGEEGVRPYIQHIGLFNSKGKHIQESCRLLLDKHGGEVPQTREELEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVIL+ AFG PTI VDTHIFR+SNR LAPGK KVE+ LL+ +P ++ +NAH+WL
Sbjct: 121 KTANVILNTAFGQPTIAVDTHIFRVSNRTDLAPGKDVVKVEEQLLKRVPKEYLHNAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY CKAR P C CI+ LC ++
Sbjct: 181 ILHGRYTCKARNPDCAQCIVEPLCGFKQK 209
>gi|37526284|ref|NP_929628.1| endonuclease III [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785715|emb|CAE14706.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 212
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 140/209 (66%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL + F L+++VLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKQKRI-EILTRLRDNNPKPTTELVFTTPFELLISVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ +L +G L+ YI+TIG+Y K+EN I IL+ + ++P+ L LPG+GR
Sbjct: 60 TPQAILNLGVDGLKEYIKTIGLYNTKAENTIKTCQILLEKHAGEVPEDRAALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK N+VE LL+++P + + + H+WL
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVNEVENKLLQVVPAEFKVDCHHWL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|256826307|ref|YP_003150267.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Kytococcus sedentarius DSM 20547]
gi|256689700|gb|ACV07502.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Kytococcus sedentarius DSM 20547]
Length = 244
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 108/197 (54%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
++ + + P + EL + N F L+VA ++SAQ+TDV VN T LF + A
Sbjct: 1 MYRVLVERHPDAECELDFRNPFELLVATVMSAQTTDVAVNAVTPGLFARYPDAVSLAAAV 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+++ I+ G YR K+ +II L+ L+ ++P + L +LPG+GRK ANV+L
Sbjct: 61 PAEVEVLIKRTGFYRAKTRSIIGLAQALVEHHAGEVPPRMAELVKLPGVGRKTANVVLGN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AF P + VDTH R+ R+G P KVE ++ ++P + N + L+ HGR VC
Sbjct: 121 AFDTPGLTVDTHFGRLVRRMGWTAETDPVKVEHAIAELMPRREWTNLSHTLIFHGRRVCH 180
Query: 208 ARKPQCQSCIISNLCKR 224
+R+P C +C ++ C
Sbjct: 181 SRRPACGACPVARWCPS 197
>gi|148244982|ref|YP_001219676.1| endonuclease III [Candidatus Vesicomyosocius okutanii HA]
gi|146326809|dbj|BAF61952.1| endonuclease III [Candidatus Vesicomyosocius okutanii HA]
Length = 210
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +IF K P+P EL Y F L+VAV LSAQ+TD +VNK T LF IA+T
Sbjct: 1 MNAETRTKIFGRLLKKIPNPTTELNYSTPFELLVAVTLSAQATDKSVNKVTDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +GE L+N IRTIG++ K+++II ILI ++++ +P+T + L LPG+GRK
Sbjct: 61 PETISKLGEDTLRNTIRTIGLFNSKAKHIIQACKILIEKYNSGVPKTRKELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R++NR +A GKT +VE+ L++ IP +++ AH+ ++
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLVKFIPNEYRVPAHHLMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKAR P C CI+ +LC+ ++
Sbjct: 181 LHGRYTCKARSPLCGECILLDLCEYEEK 208
>gi|220924623|ref|YP_002499925.1| endonuclease III [Methylobacterium nodulans ORS 2060]
gi|219949230|gb|ACL59622.1| endonuclease III [Methylobacterium nodulans ORS 2060]
Length = 248
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 159/224 (70%), Gaps = 3/224 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
+V+ + + +P L EIF S P+P+ +L YVN +TL+VAV+LSAQ
Sbjct: 20 LVAPLTAPAV-PKTPEPVD--AATLREIFARLSAANPAPRSDLQYVNPYTLLVAVVLSAQ 76
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD VN AT+ LF AD P MLA+GE+ ++ +IRTIG++ K++N+I+LS IL+
Sbjct: 77 ATDKGVNLATRDLFAKADHPAAMLALGEEAVRQHIRTIGLFNTKAKNVIALSQILVERHG 136
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+ E L LPG+GRK A+V+L++AFG PTI VDTHIFR+SNRI LAPG T +KV++
Sbjct: 137 GEVPRRREELEVLPGVGRKTASVVLNVAFGEPTIAVDTHIFRVSNRIPLAPGPTTDKVQE 196
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L I+P +++NAH+WL+LHGRYVCKARKP+C C+I++LC+
Sbjct: 197 GLEAIVPEPYRHNAHHWLILHGRYVCKARKPECWRCVIADLCRY 240
>gi|55821227|ref|YP_139669.1| endonuclease III, DNA repair [Streptococcus thermophilus LMG 18311]
gi|55737212|gb|AAV60854.1| endonuclease III, DNA repair [Streptococcus thermophilus LMG 18311]
Length = 219
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K + E L +P GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 4 SIMLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGLWAR 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+
Sbjct: 64 YPEIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAILMNFDGQVPKTHKELESLPGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV+L+ +GIP+I VDTH+ R+S R+ +AP + ++E L++ IP K +H
Sbjct: 124 GRKTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWIISH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ GRY C A+ P+CQ+C + + CK ++
Sbjct: 184 HRMIFFGRYHCLAKNPKCQTCPLQSYCKYYRE 215
>gi|238790384|ref|ZP_04634155.1| Endonuclease III [Yersinia frederiksenii ATCC 33641]
gi|238721491|gb|EEQ13160.1| Endonuclease III [Yersinia frederiksenii ATCC 33641]
Length = 213
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRVAILTRLRDNNPHPTTELVYHTPFELLISVLLSAQATDVSVNKATAKLYPLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGVEGLKSYIKTIGLFNTKAENVIKTCRILLEKHHGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APG ++VE L++++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGTNVDQVEAKLIKVVPAEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|110597194|ref|ZP_01385483.1| endonuclease III [Chlorobium ferrooxidans DSM 13031]
gi|110341385|gb|EAT59850.1| endonuclease III [Chlorobium ferrooxidans DSM 13031]
Length = 211
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 133/208 (63%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + + ++P+PK EL Y N F L++A +L+AQSTD VN T+ LF++A
Sbjct: 1 MTPKEKIVLLKEVLGSRYPNPKSELNYENPFQLLIATILAAQSTDRQVNVITRELFKVAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++N +R+I + K++NI+ +S IL+NE++ ++P L LPG+GR
Sbjct: 61 DANSLSRMELDEVKNLVRSINYFNNKAKNILEVSRILVNEYEGRVPDRRAALESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+LS AF P + VDTH+ R+SNRIG+ + E L++IIP + H++L
Sbjct: 121 KTANVVLSNAFRQPVMPVDTHVHRVSNRIGVVKTGKVEETETELMKIIPEAWVIDFHHYL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+LHGRY CKA+KP+CQ+C +S +C +
Sbjct: 181 LLHGRYTCKAKKPECQNCPLSFVCDYAQ 208
>gi|152964392|ref|YP_001360176.1| endonuclease III [Kineococcus radiotolerans SRS30216]
gi|151358909|gb|ABS01912.1| endonuclease III [Kineococcus radiotolerans SRS30216]
Length = 234
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 108/194 (55%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
L + ++P EL + + F L+VA +LSAQ TD VN+ T LF T + +
Sbjct: 17 LLAERYPDAHCELDFRDPFELLVATILSAQCTDARVNQVTPALFARYPTATDLAGADRDE 76
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L+ IR G +R K+++++ +S L+ E ++P L RL G+GRK ANV+L AFG
Sbjct: 77 LEALIRPTGFFRAKADSLLRMSAQLVAEHGGQVPGRQADLVRLAGVGRKTANVVLGDAFG 136
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+P + VDTH+ R+S R+G P KVE L +I K ++ ++ HGR C +R+
Sbjct: 137 VPGLTVDTHVGRLSRRLGFTTHDDPVKVESDLAGLIQRKDWTMFNHRMIFHGRRTCHSRR 196
Query: 211 PQCQSCIISNLCKR 224
P C +C ++ LC
Sbjct: 197 PACGACPVARLCPS 210
>gi|239947055|ref|ZP_04698808.1| endonuclease III [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921331|gb|EER21355.1| endonuclease III [Rickettsia endosymbiont of Ixodes scapularis]
Length = 212
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 147/201 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P+PK EL Y N FTL+VAV+LSAQ+TDV+VN ATK LFE DTP+K+L
Sbjct: 6 VNKIFEIFSKNNPNPKTELIYKNDFTLLVAVILSAQATDVSVNLATKSLFETYDTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI+ + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCKILISNYQASVPNDFKELVKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++ RIG A G +P VE+ LL+II K +AHYWL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVAKRIGFAKGNSPEIVEKELLQIIDEKWLTHAHYWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C+
Sbjct: 186 ICKARKPDCDICPIKEYCEYY 206
>gi|166157039|emb|CAO79496.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 217
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+++I K+PSP+ EL + N + L VAV+LSAQ+TD VN+ T LF+ + + +
Sbjct: 12 VDKIVKTLKKKYPSPRTELIHENEYQLAVAVMLSAQTTDKKVNQVTPQLFKKYPSWESLA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +Q+ I+ + Y+ K+E +I ++ F +P+ +E L ++PG+ RK ANVI
Sbjct: 72 SADLLDVQSLIKEVNFYKGKAERLIQAGRVVTLNFGGVLPRNMEDLMKIPGVARKSANVI 131
Query: 145 LSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ +GI I VDTH+ R+SNR+GL + P K+E+ L++IIP + N +VLHGR
Sbjct: 132 MQELWGIADGIVVDTHVKRVSNRLGLTKEQDPEKIEKDLMKIIPKRSWRNFSGAMVLHGR 191
Query: 204 YVCKARKPQCQSCIISNLCKR 224
Y+C A+ P+C+ C ++ +C
Sbjct: 192 YICTAKSPKCEECPLNEICPS 212
>gi|309379626|emb|CBX21797.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 223
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/215 (47%), Positives = 143/215 (66%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + L + +EIF F P P EL + + F L++AVLLSAQ+TDV VNKA
Sbjct: 5 AERTNRLHKKMNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKA 64
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF +ADTPQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E
Sbjct: 65 TAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREA 124
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+GRK ANV+L+ AFG P + VDTH RI NR +APGK +VE L+R IP +
Sbjct: 125 LESLPGVGRKTANVVLNTAFGHPVMAVDTHTIRIVNRTKIAPGKDVREVEDKLMRFIPKE 184
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+AH+WL+LHGRY CKA KPQCQ+CII++LC+
Sbjct: 185 FLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEY 219
>gi|256752746|ref|ZP_05493594.1| endonuclease III [Thermoanaerobacter ethanolicus CCSD1]
gi|256748384|gb|EEU61440.1| endonuclease III [Thermoanaerobacter ethanolicus CCSD1]
Length = 216
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 128/206 (62%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T +E ++ + +P+ K L + N F L++A +LSAQ TD VN T LF+ TP
Sbjct: 7 TKEEALKVIEILKNTYPNAKSGLKFTNPFELLIATILSAQCTDKRVNIITDRLFKKYKTP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ L + ++LQ IR G+YR KS++I+ IL ++D+K+P+TLE L LPG+GRK
Sbjct: 67 EDFLKLTPEELQEEIRECGLYRNKSKSILETCKILKEKYDSKVPETLEELMTLPGVGRKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+LS AF I VDTH+FR+SNRIGLA K E+ L+ +IP +H+ L+
Sbjct: 127 ANVVLSNAFSKQAIAVDTHVFRVSNRIGLADSKDVFTTEKHLMELIPENLWSLSHHLLIH 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C ARKP+C C +++LC K
Sbjct: 187 HGRNLCMARKPKCDECPVNHLCLYFK 212
>gi|257462928|ref|ZP_05627333.1| endonuclease III [Fusobacterium sp. D12]
gi|317060548|ref|ZP_07925033.1| endonuclease III [Fusobacterium sp. D12]
gi|313686224|gb|EFS23059.1| endonuclease III [Fusobacterium sp. D12]
Length = 213
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E+ K+ PK L + + F L+VAV+LSAQ TDV VN TK +F +
Sbjct: 1 MDKKQRVREVLKRLEEKFGKPKCALDFKSPFELLVAVILSAQCTDVRVNIVTKQMFPHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++ +IR+ G Y K++NI S L+ + ++PQ ++ L L G+GR
Sbjct: 61 TPEQFANMEVEEIEEWIRSTGFYHNKAKNIKKCSQQLLELYGGEVPQDMDKLVNLAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN IG + P K+E+ L++I+P K + ++
Sbjct: 121 KTANVVRGEIWGLADGITVDTHVRRLSNLIGFVQEEDPIKIERELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+L GR C AR+P+C C IS CK K
Sbjct: 181 LILQGRDTCIARRPRCNQCEISEFCKGKK 209
>gi|86139808|ref|ZP_01058374.1| endonuclease III [Roseobacter sp. MED193]
gi|85823437|gb|EAQ43646.1| endonuclease III [Roseobacter sp. MED193]
Length = 214
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTPQKML
Sbjct: 10 IREIFSRFQAAEPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + + +I+TIG++R+K++N+I LS IL++++ ++P + L LPG+GRK ANV+
Sbjct: 70 DLGIEGVTEHIKTIGLFRQKAKNVIKLSQILVDDYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWHQPAQAVDTHIFRVGNRSGIAPGKDVDAVERAVEDNIPADFQQHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +C+I +LC+
Sbjct: 190 HCKARKPLCGTCLIRDLCQY 209
>gi|319406478|emb|CBI80119.1| endonuclease III [Bartonella sp. 1-1C]
Length = 246
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 111/223 (49%), Positives = 160/223 (71%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ K S + +Y E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+
Sbjct: 1 MTEKVIKSLEIYKNTKTIYRKDEIAEIFRRFSVQRPTPKSDLNYTNVFTLLVAVVLSAQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD +VNK TK LF AD P+KM+ +GE+ + +IR+IG++R K+ N+ +L LI+++
Sbjct: 61 TDASVNKVTKKLFCFADRPEKMITLGEEGIAQHIRSIGLWRAKAHNVYALCCRLIDQYGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P + E L LPG+GRK ANV+L++AFG PT+ VDTHI R+ NR+GLA GKTP +VE+
Sbjct: 121 QVPDSREALMTLPGVGRKTANVVLNIAFGQPTMAVDTHILRLGNRLGLASGKTPEEVEEK 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L++IIP + AH+WL+LHGRY+CKARK +C CII++LCK
Sbjct: 181 LVKIIPDCYLQYAHHWLILHGRYICKARKVECVQCIIADLCKA 223
>gi|91782518|ref|YP_557724.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Burkholderia xenovorans LB400]
gi|91686472|gb|ABE29672.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Burkholderia xenovorans LB400]
Length = 214
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLRSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ++ +GE+ + YI+TIG+YR K++N+I+ IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PQQVFDLGEEGVAGYIKTIGLYRTKAKNVIATCRILLDQYGGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + + +AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFKQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|50084302|ref|YP_045812.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter sp. ADP1]
gi|49530278|emb|CAG67990.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter sp. ADP1]
Length = 221
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/203 (48%), Positives = 142/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K++ F + P P+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MTKKQIRTFFERLRAQRPYPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
++ A+G + L+ YI+TIG+Y K+EN+I IL+ + ++PQT L LPG+GRK
Sbjct: 61 AAQIYALGVEGLKQYIKTIGLYNAKAENVIKTCQILLEKHQGEVPQTRAELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLIKVIPKEFIIDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C++S++C
Sbjct: 181 LHGRYCCIARKPKCAECVVSDVC 203
>gi|161524126|ref|YP_001579138.1| endonuclease III [Burkholderia multivorans ATCC 17616]
gi|189351117|ref|YP_001946745.1| endonuclease III-related protein [Burkholderia multivorans ATCC
17616]
gi|160341555|gb|ABX14641.1| endonuclease III [Burkholderia multivorans ATCC 17616]
gi|189335139|dbj|BAG44209.1| endonuclease III-related protein [Burkholderia multivorans ATCC
17616]
Length = 214
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+++A+GE+ + YI+TIG+YR K++N+++ IL+ + ++P E L LPG+GRK
Sbjct: 61 PQQIVALGEEGVAEYIKTIGLYRTKAKNVVAACRILLERYGGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVKAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|163744902|ref|ZP_02152262.1| endonuclease III [Oceanibulbus indolifex HEL-45]
gi|161381720|gb|EDQ06129.1| endonuclease III [Oceanibulbus indolifex HEL-45]
Length = 214
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 111/200 (55%), Positives = 150/200 (75%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQSTD VNKAT+ LF+IADTPQKML
Sbjct: 10 IREIFARFQQAEPEPKGELEHVNVYTLVVAVALSAQSTDAGVNKATRELFQIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + ++I+TIG+YR+K++N+I LS IL++E+D ++P + L LPG+GRK ANV+
Sbjct: 70 DLGVDGVIDHIKTIGLYRQKAKNVIKLSQILVDEYDGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGKT + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWEQPAQAVDTHIFRVGNRTGIAPGKTVDAVERAVEDNIPADFQRHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C++CII +LC+
Sbjct: 190 HCKARKPLCRTCIIRDLCQY 209
>gi|218767655|ref|YP_002342167.1| putative endonuclease III [Neisseria meningitidis Z2491]
gi|93117263|gb|ABE99549.1| endonuclease III [Neisseria meningitidis]
gi|93117265|gb|ABE99550.1| endonuclease III [Neisseria meningitidis]
gi|93117271|gb|ABE99553.1| endonuclease III [Neisseria meningitidis]
gi|121051663|emb|CAM07966.1| putative endonuclease III [Neisseria meningitidis Z2491]
gi|261393096|emb|CAX50693.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Neisseria meningitidis 8013]
gi|319409911|emb|CBY90236.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Neisseria meningitidis WUE 2594]
Length = 209
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 141/199 (70%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ ++ ++P+ E L LPG+GRK ANV+L
Sbjct: 67 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKGEVPEDREALESLPGVGRKTANVVL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 127 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 186
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 187 CKALKPQCQTCIINDLCEY 205
>gi|218782481|ref|YP_002433799.1| endonuclease III [Desulfatibacillum alkenivorans AK-01]
gi|218763865|gb|ACL06331.1| endonuclease III [Desulfatibacillum alkenivorans AK-01]
Length = 210
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 119/203 (58%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K +++I +P+ K +L + + F L++A +LSAQ TD VN T LF A TP
Sbjct: 4 NKKNVKKILEGLQKAYPAVKTQLEHNSPFQLLIATMLSAQCTDKQVNSVTPALFARASTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++++ + K+L+ I G + K++ + + L+ + +P+ +E L LPG+GRK
Sbjct: 64 EEIMEVPLKELEELIHATGFFHTKAKRVKECAAALMEKHGGVVPRDMESLLALPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L+ AF IP I VDTH+ RIS R+G K P K+E L++++P + + L+
Sbjct: 124 ANVVLNAAFEIPGIVVDTHVQRISQRLGFTKFKDPVKIEFDLMKLLPKESWIDFSLHLIY 183
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
HGR VC ARKP+C C ++ CK
Sbjct: 184 HGRAVCTARKPKCGECTLAEWCK 206
>gi|73540749|ref|YP_295269.1| DNA-(apurinic or apyrimidinic site) lyase [Ralstonia eutropha
JMP134]
gi|72118162|gb|AAZ60425.1| DNA-(apurinic or apyrimidinic site) lyase [Ralstonia eutropha
JMP134]
Length = 214
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +F P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF IA T
Sbjct: 1 MNVAKVHALFETLREVNPAPATELEYSSPFELLIAVLLSAQATDVGVNKATRRLFPIAHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+ML +GE+ L YI+TIG+Y+ K+++++ IL+ + K+P L LPG+GRK
Sbjct: 61 PQQMLDLGEEGLSEYIKTIGLYKTKAKHVMQTCRILVEQHGGKVPPDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE LL+++P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVQIVEDKLLKVVPREFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C+I LC+ +
Sbjct: 181 LHGRYVCKARKPECWHCVIEPLCEYRDK 208
>gi|221211648|ref|ZP_03584627.1| endonuclease III [Burkholderia multivorans CGD1]
gi|221169009|gb|EEE01477.1| endonuclease III [Burkholderia multivorans CGD1]
Length = 214
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+++A+GE+ + YI+TIG+YR K++N+++ IL+ ++ ++P E L LPG+GRK
Sbjct: 61 PQQIVALGEEGVAEYIKTIGLYRTKAKNVVAACRILLERYNGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVKAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|23015472|ref|ZP_00055247.1| COG0177: Predicted EndoIII-related endonuclease [Magnetospirillum
magnetotacticum MS-1]
Length = 211
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/203 (51%), Positives = 141/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TPK+ + F + + P PK +L Y + +TL+VAV+LSAQ+TD VNKAT LF T
Sbjct: 1 MTPKQADLFFARLAERNPEPKSDLQYSDPYTLLVAVVLSAQATDAGVNKATAPLFARVAT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ M+ +GE+ L IRTIG+Y+ K++N+I LS L+ ++P L LPG+GRK
Sbjct: 61 PQAMVELGEEGLAQSIRTIGLYKTKAKNVIELSRRLLALHGGQVPHDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PTI VDTH FR++NR GLAPGKT VEQ+L++ P K +AH+WL+
Sbjct: 121 TANVVLNIAFGEPTIAVDTHCFRVANRTGLAPGKTVELVEQALMKATPAKWLQHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY CKARKP+C +C + +LC
Sbjct: 181 LHGRYTCKARKPECGACAVRDLC 203
>gi|55980081|ref|YP_143378.1| endonuclease III [Thermus thermophilus HB8]
gi|55771494|dbj|BAD69935.1| endonuclease III [Thermus thermophilus HB8]
Length = 220
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 124/204 (60%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E+ +P + EL + N F L+VA +LSAQ+TD +VN+AT LF
Sbjct: 14 KKARAREVLKALKAAYPGARTELRHENPFQLLVATVLSAQATDKSVNEATPALFARFPDA 73
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++++ YIR IG+YR K++N+++L+ L+ E+ ++P+ E L RLPG+G K
Sbjct: 74 KALAEATPEEVEPYIRRIGLYRTKAKNLVALARRLVEEYGGEVPKEKEALMRLPGVGWKT 133
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L AFG+P I VDTH+ R++ R+ + K P ++ + L + P + H+ LVL
Sbjct: 134 ATVVLGAAFGVPGIAVDTHVARLARRLCFSEAKAPERIGKDLEALFPKEDWVFVHHALVL 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGRYVC AR+P+C++C+++ C
Sbjct: 194 HGRYVCTARRPRCRACVLAPYCPS 217
>gi|294340194|emb|CAZ88566.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Thiomonas sp. 3As]
Length = 213
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 152/205 (74%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P +++ +F F+ P+ EL Y F L+VAV LSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MKPAQIQTLFERFAAANREPRTELEYRTPFELLVAVALSAQATDVSVNKATRSLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE +L+ IRTIG+Y+ K++NII+ ILI+++ ++P++ E L LPG+GRK
Sbjct: 61 PQALLDLGEDRLREAIRTIGLYKTKAKNIIATCRILIDQYGGEVPRSREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG TI VDTHIFR++NR+GLA G TP VE L ++IPP+ + +AH+WL+
Sbjct: 121 TANVVLNVAFGQDTIAVDTHIFRVANRLGLAKGNTPLAVETRLEKVIPPQFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C +++LC
Sbjct: 181 LHGRYVCKARKPECWRCGVADLCAY 205
>gi|116627954|ref|YP_820573.1| endonuclease III, DNA repair [Streptococcus thermophilus LMD-9]
gi|116101231|gb|ABJ66377.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Streptococcus thermophilus LMD-9]
gi|312278542|gb|ADQ63199.1| Endonuclease III, DNA repair [Streptococcus thermophilus ND03]
Length = 214
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 127/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + E L +P GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 1 MLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGLWARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+GR
Sbjct: 61 EIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAILMNFDGQVPKTHKELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +GIP+I VDTH+ R+S R+ +AP + ++E L++ IP K +H+
Sbjct: 121 KTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWIISHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C A+ P+CQ+C + + CK ++
Sbjct: 181 MIFFGRYHCLAKNPKCQTCPLQSYCKYYRE 210
>gi|253582535|ref|ZP_04859757.1| endonuclease III [Fusobacterium varium ATCC 27725]
gi|251835680|gb|EES64219.1| endonuclease III [Fusobacterium varium ATCC 27725]
Length = 376
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +++++I K+ PK L Y F L+VAV+LSAQ TDV VN TK +++
Sbjct: 161 EKIMTKKEKVKKILEKLHEKFGDPKCALDYKTPFELLVAVILSAQCTDVRVNIVTKEMYK 220
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+TP+ A+ +K++ I++ G +R K++NI S L+++++ +IP+ ++ L L G
Sbjct: 221 KVNTPEGFAALPVEKIEEMIKSTGFFRNKAKNIKLCSQQLLSKYNGEIPKDMDKLIELAG 280
Query: 136 IGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+ +G I VDTH+ R+SN IGL P K+EQ L++I+P K +
Sbjct: 281 VGRKTANVVRGEVWGLADGITVDTHVKRLSNLIGLVKNDDPIKIEQDLMKIVPKKDWIDF 340
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++L+L GR C AR+P+C C I C+ K
Sbjct: 341 SHYLILQGRDKCIARRPKCNECEIKEFCEHGK 372
>gi|240849768|ref|YP_002971156.1| endonuclease III [Bartonella grahamii as4aup]
gi|240266891|gb|ACS50479.1| endonuclease III [Bartonella grahamii as4aup]
Length = 246
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 166/208 (79%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
G LY E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+TDV+VNKATK LF +
Sbjct: 16 GILYNENEIAEIFRRFSVQRPAPKSDLIYTNIFTLLVAVVLSAQATDVSVNKATKELFRL 75
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
AD P+KM+A+GE+++ ++IR+IG++R K+ N+ +L + LI+ + ++P T E L LPG+
Sbjct: 76 ADQPEKMVALGEEEIAHHIRSIGLWRAKARNVYALCNCLIDCYGGQVPDTREALMSLPGV 135
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK ANV+L++AFG PT+ VDTHIFR+SNR+GLAPGKTP VE+ LL+IIP + +AH+
Sbjct: 136 GRKTANVVLNVAFGQPTLAVDTHIFRLSNRLGLAPGKTPEIVEKKLLKIIPIHYLRHAHH 195
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRYVC+ARK QC+ CII++LCK
Sbjct: 196 WLILHGRYVCQARKAQCRQCIIADLCKA 223
>gi|221199572|ref|ZP_03572616.1| endonuclease III [Burkholderia multivorans CGD2M]
gi|221205528|ref|ZP_03578543.1| endonuclease III [Burkholderia multivorans CGD2]
gi|221174366|gb|EEE06798.1| endonuclease III [Burkholderia multivorans CGD2]
gi|221180857|gb|EEE13260.1| endonuclease III [Burkholderia multivorans CGD2M]
Length = 214
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQRLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+++A+GE+ + YI+TIG+YR K++N+++ IL+ + ++P E L LPG+GRK
Sbjct: 61 PQQIVALGEEGVAEYIKTIGLYRTKAKNVVAACRILLERYGGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVKAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|258404953|ref|YP_003197695.1| endonuclease III [Desulfohalobium retbaense DSM 5692]
gi|257797180|gb|ACV68117.1| endonuclease III [Desulfohalobium retbaense DSM 5692]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + ++P P L + + + L+VA +LSAQ TD VN T F
Sbjct: 1 MQRMHRAGIVLERLAQRYPRPASALQWQSPWELLVATVLSAQCTDQRVNAVTPGFFHRWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + +++++ IR+ G +R KS+N+++ + ++ E + ++P T+ L LPG+ R
Sbjct: 61 DPESLAQAEQEEVEQAIRSTGFFRNKSKNLLATAQRIVKEHEGQVPDTMSQLLALPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++LS AFG I VDTH+ R++NR+GL K PN +EQ L+ + P +++
Sbjct: 121 KTANIVLSNAFGHNEGIAVDTHVKRLANRLGLTDAKDPNHIEQDLMPLFPQNQWGALNHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
LVL GR VCKAR P C C + ++C R
Sbjct: 181 LVLFGREVCKARSPLCSQCPLYDICPRY 208
>gi|157375175|ref|YP_001473775.1| DNA-(apurinic or apyrimidinic site) lyase [Shewanella sediminis
HAW-EB3]
gi|157317549|gb|ABV36647.1| DNA-(apurinic or apyrimidinic site) lyase [Shewanella sediminis
HAW-EB3]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ I + P P+ EL + + F L+VAV LSAQ+TDV+VNKAT LF +A+
Sbjct: 1 MNKSKRIQ-ILEILRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A+G L+ YI+TIG+Y K+ N+I ILI +F+ ++P+ E L LPG+GR
Sbjct: 60 TAHAIHALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKFNGEVPEDREALESLPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI +DTHIFR++NR A GK VE +L+++P + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAIDTHIFRVANRTKFAMGKNVVDVEDKMLKVVPSEFMVDVHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SC+I LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCLIEELCEFKDK 208
>gi|42528034|ref|NP_973132.1| endonuclease III [Treponema denticola ATCC 35405]
gi|41819079|gb|AAS13051.1| endonuclease III [Treponema denticola ATCC 35405]
Length = 210
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 108/204 (52%), Positives = 153/204 (75%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L ++EE++ F P+PKGEL+ N FTL+VAV+LSAQ+TDV VNKAT F+ AD
Sbjct: 3 LLDKDKIEEVYRRFKKNNPNPKGELHSANIFTLLVAVVLSAQATDVGVNKATGPFFKAAD 62
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM+ +GE+ ++ YI+TI +Y K++ I LS I+ NE+ +P ++E L +LPG+GR
Sbjct: 63 TPQKMIELGEEGIREYIKTINLYPTKAKRIFELSRIIQNEYSGMVPDSMEELIKLPGVGR 122
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+M FG P I VDTHI R + RIGL+ GKTP +VE+ LL++ P K+ NAH+W+
Sbjct: 123 KTANVVLNMGFGKPAIAVDTHILRTAPRIGLSLGKTPIQVEEDLLKVTPKKYLLNAHHWI 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+LHGRY+CKARKP+C++C +S++C
Sbjct: 183 LLHGRYICKARKPECETCFLSDIC 206
>gi|297623005|ref|YP_003704439.1| endonuclease III [Truepera radiovictrix DSM 17093]
gi|297164185|gb|ADI13896.1| endonuclease III [Truepera radiovictrix DSM 17093]
Length = 214
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 116/205 (56%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I +P EL + N F L++A +LSAQ+TD +VN AT LFE
Sbjct: 10 ERAPLILRALQESYPDATTELDHHNPFELLIATILSAQATDRSVNAATPALFERYPDAHA 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++++ YIR IG+YR K+ N ++ + L+ F ++P+ + LPG+GRK A
Sbjct: 70 LALAEPEEVEPYIRRIGLYRAKARNCVATARALVERFGGEVPEDFGAVLSLPGVGRKTAA 129
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L+ AFG P I VDTH+ R++ R+GL+ P++V++ L + PP H L+ HG
Sbjct: 130 VVLANAFGRPAIAVDTHVGRLARRLGLSAATNPDRVQRDLEALFPPASWIFLHNALIFHG 189
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R VC AR P C+ C ++ LC ++
Sbjct: 190 RRVCFARAPACEVCTLAPLCPSRRR 214
>gi|270261657|ref|ZP_06189930.1| hypothetical protein SOD_a08920 [Serratia odorifera 4Rx13]
gi|270045141|gb|EFA18232.1| hypothetical protein SOD_a08920 [Serratia odorifera 4Rx13]
Length = 211
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKLKRLEILTRLRDNNPQPTTELVYTTPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G +++YI+TIG++ K+EN+I +L+ ++P+ L LPG+GRK
Sbjct: 61 PAALLALGVDGVKSYIKTIGLFNSKAENVIKTCRMLLELHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK ++VE+ LL+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVDQVEEKLLKVVPGEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFADK 208
>gi|254468543|ref|ZP_05081949.1| endonuclease III [beta proteobacterium KB13]
gi|207087353|gb|EDZ64636.1| endonuclease III [beta proteobacterium KB13]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 137/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +IF PK EL Y N F L++AV+LSAQ+TDV VN+ T LF+IA
Sbjct: 1 MNYEKRWDIFNALKNHIKEPKTELVYKNTFELLIAVILSAQTTDVQVNRVTAKLFKIAPD 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+ + K+++ I +IG+Y+ K++NI S +LI +++ ++PQ+ + L LPG+GRK
Sbjct: 61 PLKLSKLSLDKIESLINSIGLYKNKAKNIQQTSSMLITKYNGEVPQSRKELENLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ F P I VDTHIFR++NRI LA GKTP +VE+ L R+ P + + H+ L+
Sbjct: 121 TANVILNTVFDEPVIAVDTHIFRLANRINLAKGKTPLEVEKKLTRLTPTEFLIDTHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKA+ P C +C I + C+ K+
Sbjct: 181 LHGRYVCKAQNPDCSNCCIYDFCEYKKK 208
>gi|194097769|ref|YP_002000810.1| putative endonuclease III [Neisseria gonorrhoeae NCCP11945]
gi|291044532|ref|ZP_06570241.1| endonuclease III [Neisseria gonorrhoeae DGI2]
gi|193933059|gb|ACF28883.1| putative endonuclease III [Neisseria gonorrhoeae NCCP11945]
gi|291011426|gb|EFE03422.1| endonuclease III [Neisseria gonorrhoeae DGI2]
gi|317163552|gb|ADV07093.1| putative endonuclease III [Neisseria gonorrhoeae TCDC-NG08107]
Length = 220
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADT
Sbjct: 12 MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADT 71
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK
Sbjct: 72 PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRK 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+
Sbjct: 132 TANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI 191
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA KPQCQ+CII++LC+
Sbjct: 192 LHGRYTCKALKPQCQTCIINDLCEY 216
>gi|67459583|ref|YP_247207.1| endonuclease III [Rickettsia felis URRWXCal2]
gi|75536019|sp|Q4UK93|END3_RICFE RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|67005116|gb|AAY62042.1| Endonuclease III [Rickettsia felis URRWXCal2]
Length = 213
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 147/201 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS PSPK EL Y N FTL+VAV+LSAQ+TD++VN ATK LFE DT +K+L
Sbjct: 6 VNKIFEIFSKNNPSPKTELIYKNDFTLLVAVMLSAQATDISVNLATKSLFETYDTTEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE L+ YI++IG++ K++NII+L ILI+ + + +P + L +LPG+GRK ANV+
Sbjct: 66 ELGEDGLKKYIKSIGLFNSKAKNIIALCKILISNYQSSVPNDFKELIKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ FG+PT+ VDTH+FR++ RIGLA G +P VE+ LL+II K +AH+WL+LHGRY
Sbjct: 126 LNCLFGMPTMAVDTHVFRVAKRIGLARGNSPEIVEKELLQIINEKWLTHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C+
Sbjct: 186 ICKARKPDCDICPIKEYCEYY 206
>gi|325980918|ref|YP_004293320.1| endonuclease III [Nitrosomonas sp. AL212]
gi|325530437|gb|ADZ25158.1| endonuclease III [Nitrosomonas sp. AL212]
Length = 210
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 147/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P+P EL Y F L++AV+LSAQ+TD +VN AT+ LF A T
Sbjct: 1 MNAAKRHEIFACLKTTNPNPTTELEYRTPFELLIAVILSAQATDKSVNLATRKLFPQAHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++MLA+GE L +I+ IG+Y+ K++NI++ +LI + +++P+T E L +LPG+GRK
Sbjct: 61 PEEMLALGEAGLTGFIQRIGLYKTKAKNILATCQLLIQQHRSEVPRTRELLEQLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+ +P + + +AH+WL+
Sbjct: 121 TANVILNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKTVPKEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP C +C I++LC+ +
Sbjct: 181 LHGRYVCKARKPICSACKINHLCEFKDK 208
>gi|253681997|ref|ZP_04862794.1| endonuclease III [Clostridium botulinum D str. 1873]
gi|253561709|gb|EES91161.1| endonuclease III [Clostridium botulinum D str. 1873]
Length = 208
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 137/206 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++E++ + + K L + + L++A +LSAQ TD VN T LF+ ++
Sbjct: 1 MKKHDIEKVIEVLEHNYRGAKCALNFKTPYELLIATMLSAQCTDERVNIVTGELFKEYNS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM+ + +++L I++ G+Y+ KS+NI++ S+ ++N+++ IP +E L +LPGIGRK
Sbjct: 61 PEKMITLTQEELGEKIKSCGLYKNKSKNILAASYEILNKYNGNIPDNMEQLIQLPGIGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFGIP I VDTH+FR+SNRIG+A GK VE L++ IP + + H++L+
Sbjct: 121 TANVVLSNAFGIPAIAVDTHVFRVSNRIGIAKGKNVEVVENELMKNIPKEKWSDTHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR +CKARKPQC+ C ++ C+ +
Sbjct: 181 WHGRKICKARKPQCEICPVAPYCEYV 206
>gi|317177582|dbj|BAJ55371.1| endonuclease III [Helicobacter pylori F16]
Length = 216
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 3 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPGVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSDANTPIKTEKELSDLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C C + C
Sbjct: 182 HALILFGRYTCKAKNPLCGECFLKEFC 208
>gi|237731403|ref|ZP_04561884.1| endonuclease III [Citrobacter sp. 30_2]
gi|226906942|gb|EEH92860.1| endonuclease III [Citrobacter sp. 30_2]
Length = 211
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G + +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPSEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPCCGSCIIEDLCEFKEK 208
>gi|226355002|ref|YP_002784742.1| endonuclease III [Deinococcus deserti VCD115]
gi|226316992|gb|ACO44988.1| putative endonuclease III [Deinococcus deserti VCD115]
Length = 222
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
P G ++ + +P + EL + F L+VA +LSAQ+TDV+
Sbjct: 2 TRKPQTARLPAGART---RAPQVLSALEVLYPDARTELEFRTPFELLVATVLSAQATDVS 58
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN AT LF M + ++ IR IG+YR K+ N+ +L+ +L+ D ++P
Sbjct: 59 VNAATPALFAAYPDAHAMSRAEPEDIEPLIRRIGLYRAKARNLAALARLLVERHDGEVPN 118
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
+ + LPG GRK ANV+LS A+G P I VDTH+ R++ RIGL+ P+KVE L R+
Sbjct: 119 DFDAVVALPGAGRKTANVVLSNAYGYPAIAVDTHVGRLARRIGLSTQTNPDKVEVDLQRL 178
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P + H+ L+LHGR VC AR+P C++C++++ C ++
Sbjct: 179 FPRERWVFLHHGLILHGRRVCIARRPLCENCLMASFCPKV 218
>gi|149186368|ref|ZP_01864681.1| endonuclease III [Erythrobacter sp. SD-21]
gi|148829957|gb|EDL48395.1| endonuclease III [Erythrobacter sp. SD-21]
Length = 216
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ E F + PSP+ EL Y N + L+VAV LSAQ+TDV VNKAT LF T
Sbjct: 1 MTKDQIFEFFRRLAEDNPSPETELKYGNCYQLVVAVALSAQATDVGVNKATAKLFREVTT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +M+ +GE+ L+ +I+TIG++ K++N+I+LS +L++E+ ++P T E L RLPG+GRK
Sbjct: 61 PAQMIELGEEGLKEHIKTIGLFNSKAKNVIALSQLLVDEYGGEVPDTREDLVRLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FG T VDTHI R+ NR GLA GKTP +VE L + +P + AH+WL+
Sbjct: 121 TANVVLNCWFGQETFAVDTHILRVGNRTGLAKGKTPEQVEAKLEKRVPQPFRLGAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P+C C + +LC K+
Sbjct: 181 LHGRYVCKARTPECWRCPVVDLCSYRKK 208
>gi|238061480|ref|ZP_04606189.1| endonuclease III [Micromonospora sp. ATCC 39149]
gi|237883291|gb|EEP72119.1| endonuclease III [Micromonospora sp. ATCC 39149]
Length = 262
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 106/205 (51%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +I + + P EL + N L VA +LSAQ TD VN+ T LF T
Sbjct: 15 RTRRARKIHRVLTQTHPDAHCELDHANPLELAVATILSAQCTDKKVNEVTPKLFGRYPTA 74
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ IR G YR K+ ++I L L+ +D ++P L+ L LPG+GRK
Sbjct: 75 ADYAGADRAEMEELIRPTGFYRNKTTSLIRLGQALVERYDGQVPGKLDALVTLPGMGRKT 134
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVIL AFG+P I VDTH R+ +R L P K+E ++ + P + + ++
Sbjct: 135 ANVILGNAFGVPGITVDTHFQRLVHRWRLTAETDPVKIEHAIGAMYPKRDWTMLSHRIIF 194
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR VC A+KP C +C ++ LC
Sbjct: 195 HGRRVCHAKKPGCGACTLAKLCPSY 219
>gi|188533918|ref|YP_001907715.1| Endonuclease III [Erwinia tasmaniensis Et1/99]
gi|188028960|emb|CAO96826.1| Endonuclease III [Erwinia tasmaniensis Et1/99]
Length = 211
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRHEILVRLRDDNPHPTTELNFTSPFELLISVLLSAQATDVSVNKATARLYPLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ +I+TIG++ K+EN+I +L+ ++PQ E L LPG+GRK
Sbjct: 61 PAAILALGVDGVKEHIKTIGLFNSKAENVIKTCRMLLELHGGEVPQNREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVEEVEERLLKVVPKAFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFKEK 208
>gi|329118307|ref|ZP_08247016.1| endonuclease III [Neisseria bacilliformis ATCC BAA-1200]
gi|327465531|gb|EGF11807.1| endonuclease III [Neisseria bacilliformis ATCC BAA-1200]
Length = 220
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+IF + P P+ EL+Y + F L++AVLLSAQ+TD VNKAT HLF A T
Sbjct: 1 MNKHTRYQIFARWRAANPHPQTELHYNSPFQLLIAVLLSAQATDKGVNKATAHLFPAAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + Y +TIG+Y+ KS++II ILI + ++PQT E L LPG+GRK
Sbjct: 61 PQAMLDLGLAGVMEYTKTIGLYKTKSKHIIETCRILIEKHGGQVPQTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG + VDTHIFR+SNR+ LAPGK +VE LLR+IP + NAH+WL+
Sbjct: 121 TANVVLNTAFGQKAMAVDTHIFRVSNRMNLAPGKNVREVEDKLLRVIPDEFILNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKA+KP C CI+++LC+ +
Sbjct: 181 LHGRYVCKAQKPLCHQCIVNDLCEYKGK 208
>gi|228476833|ref|ZP_04061478.1| endonuclease III [Streptococcus salivarius SK126]
gi|228251407|gb|EEK10552.1| endonuclease III [Streptococcus salivarius SK126]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 127/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + E L +P+ GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 1 MLGRKRVNEALALMGEMFPNAHGELEWETPFQLLVAVILSAQTTDKAVNKITPGLWARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+GR
Sbjct: 61 EIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAVLMNFDGQVPKTHKELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +GIP+I VDTH+ R+S R+ + P + ++E L++ IP + +H+
Sbjct: 121 KTANVVLAEVYGIPSIAVDTHVSRVSKRLNIVPEDASVEEIEAELMKKIPKRDWIISHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C A+ P+CQ+C + + CK K+
Sbjct: 181 MIFFGRYHCLAKNPKCQTCPLQSYCKYYKE 210
>gi|73748703|ref|YP_307942.1| endonuclease III [Dehalococcoides sp. CBDB1]
gi|289432729|ref|YP_003462602.1| endonuclease III [Dehalococcoides sp. GT]
gi|73660419|emb|CAI83026.1| endonuclease III [Dehalococcoides sp. CBDB1]
gi|288946449|gb|ADC74146.1| endonuclease III [Dehalococcoides sp. GT]
Length = 218
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+ EI S+ +P K L + F ++VA +LSAQSTD +NK T LFE P+
Sbjct: 7 EKQALEIIKRLSVVYPDAKTALNFTTPFEMLVATILSAQSTDKMINKITPALFEKYPDPK 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+L+ I++ G + K+ NII + +++ F +P + + LPG+GRK A
Sbjct: 67 AFAEASLAELEQDIKSSGFFHNKAANIIGAARGVVSRFGGVVPSGMADMLTLPGVGRKTA 126
Query: 142 NVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L AFG + I VDTH+ R++ R+GL P K+EQ L+ ++P + + Y+L+
Sbjct: 127 NVVLHNAFGLVEGIAVDTHVKRLTERLGLTSNTDPVKIEQDLMALLPRTYWGDFSYYLID 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC A+KP C C++ ++C
Sbjct: 187 HGRAVCDAKKPHCPECVLKDICPS 210
>gi|328954216|ref|YP_004371550.1| endonuclease III [Desulfobacca acetoxidans DSM 11109]
gi|328454540|gb|AEB10369.1| endonuclease III [Desulfobacca acetoxidans DSM 11109]
Length = 217
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 117/213 (54%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ P++++ I L +P L + + L+V+ +LSAQ TD VN T +F
Sbjct: 3 RETIMSPPEKMQAILPLLQRLYPKAHCTLDFADPLQLLVSTILSAQCTDERVNLVTPAVF 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T A + L+ G +R+K+++I + L+ F +IP +LE L + P
Sbjct: 63 QKYRTAADYAAAPLEDLEEAFHATGFFRQKAKSIKQICQTLVERFAGQIPPSLEELVKFP 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GIGRK ANVIL AFGIP I VDTH+ R+S R+GL K P K+E L+ ++P + +
Sbjct: 123 GIGRKTANVILGNAFGIPGIVVDTHVGRVSRRLGLTTNKDPVKIEFDLMALVPQEDWTDF 182
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ HGR VC A+KP+C +C + C ++
Sbjct: 183 SHQLIWHGRQVCMAKKPRCTACALLPYCNFGQK 215
>gi|328951624|ref|YP_004368959.1| endonuclease III [Marinithermus hydrothermalis DSM 14884]
gi|328451948|gb|AEB12849.1| endonuclease III [Marinithermus hydrothermalis DSM 14884]
Length = 221
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 124/216 (57%), Gaps = 1/216 (0%)
Query: 10 YQGNSPLGCLYTPK-ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ P L T + I +P+ + EL + F L+VA +LSAQ+TD +VN
Sbjct: 2 ARPECPKESLKTKRARAARILERLEAAYPNARTELRHETPFQLLVATVLSAQATDKSVNA 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF + ++++ YIR IG+YR K++N++ L+ +L+ ++P+ +
Sbjct: 62 ATPALFARYPDAFALAQATPEEVEPYIRRIGLYRTKAKNLVRLAQMLVERHGGEVPRDKQ 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+G K A V+L AFGIP I VDTH+ R++ R+ L+ +TP ++ L + P
Sbjct: 122 ALMELPGVGWKTATVVLGAAFGIPGIAVDTHLARLAKRLCLSQARTPERIGAELEQYFPR 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ H+ L+LHGRYVC AR+P+C++C+++ C
Sbjct: 182 ERWVFVHHALILHGRYVCTARRPRCEACVLAEACPS 217
>gi|119385598|ref|YP_916653.1| endonuclease III [Paracoccus denitrificans PD1222]
gi|119376193|gb|ABL70957.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccus denitrificans
PD1222]
Length = 222
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 144/221 (65%), Gaps = 2/221 (0%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ S P Y + IF F P P EL Y N FTL+VAV LSAQ+TDV V
Sbjct: 2 ARSTFSRLPPALPYATQVA--IFSRFREANPHPVTELEYTNAFTLLVAVALSAQATDVGV 59
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
NKATK LF+ TPQ+ML +G + L I+TIG+YR+K++N+I+LS L+ E+ ++PQ+
Sbjct: 60 NKATKSLFQRVSTPQEMLELGVEALTEQIKTIGLYRQKAKNVIALSRRLVEEYGGEVPQS 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L+ F P VDTHIFR+ NR +APG+ +VE+++ +
Sbjct: 120 RAALMTLPGVGRKTANVVLNSVFDFPAQAVDTHIFRVGNRTRIAPGRDVEEVERAIEDNV 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P Q NAH+WL+LHGRY+C+AR+P+C+ C I +LC ++
Sbjct: 180 PVPFQQNAHHWLILHGRYICQARRPRCRICPIEDLCPYEEK 220
>gi|85374945|ref|YP_459007.1| endonuclease III [Erythrobacter litoralis HTCC2594]
gi|84788028|gb|ABC64210.1| endonuclease III [Erythrobacter litoralis HTCC2594]
Length = 216
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ E F + P P+ EL Y N + L+VAV LSAQ+TDV VNKAT+ LF +T
Sbjct: 1 MTKDQIFEFFRRLAEDNPEPETELEYGNCYQLVVAVALSAQATDVGVNKATRALFAKVET 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +M+ +G L +I+TIG++ K++N+I+LS +LI+++ ++P T E L RLPG+GRK
Sbjct: 61 PAQMIELGLDGLIEHIKTIGLFNSKAKNVIALSQLLIDDYGGEVPDTREDLVRLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ F T VDTHI R+ NR GLA GKTP +VE L + +P + +AH+WL+
Sbjct: 121 TANVVLNCWFRQETFAVDTHILRVGNRTGLAKGKTPEQVEAKLEKRVPQPFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P+C C + +LC K+
Sbjct: 181 LHGRYVCKARTPECWRCKVVDLCSYRKK 208
>gi|237786550|ref|YP_002907255.1| endonuclease III [Corynebacterium kroppenstedtii DSM 44385]
gi|237759462|gb|ACR18712.1| endonuclease III [Corynebacterium kroppenstedtii DSM 44385]
Length = 272
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 115/213 (53%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ L + I +P K EL + N + ++VA +LSAQ TD VN T
Sbjct: 29 ATTETPLAKVRRARRISRALHRAYPDAKAELNFDNPYQMVVATILSAQCTDRRVNTVTPA 88
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+ P+ + ++++ YIR+ G Y K+ N++SL H L+ FD +P T+ L
Sbjct: 89 LFQRFPGPEDLDNASVEEVEEYIRSTGFYHNKARNLVSLGHELVARFDGAVPDTMADLVS 148
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK AN +L AFG P I VDTH+ R+ R GL K P KVEQ + ++I K
Sbjct: 149 LPGVGRKTANTVLGNAFGKPGITVDTHMGRLMRRFGLTDAKDPKKVEQDVAQLIEKKRWT 208
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +++HGR VC +RK C +C ++ C+
Sbjct: 209 PFSHEVIIHGRRVCHSRKAACGACFLAKDCRGF 241
>gi|83719698|ref|YP_441524.1| endonuclease III [Burkholderia thailandensis E264]
gi|167580297|ref|ZP_02373171.1| endonuclease III [Burkholderia thailandensis TXDOH]
gi|167618419|ref|ZP_02387050.1| endonuclease III [Burkholderia thailandensis Bt4]
gi|257139788|ref|ZP_05588050.1| endonuclease III [Burkholderia thailandensis E264]
gi|83653523|gb|ABC37586.1| endonuclease III [Burkholderia thailandensis E264]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIFETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K++A+GE+ + +YI+TIG++R K++N+++ S +L+ +D ++P E L LPG+GRK
Sbjct: 61 PKKIVALGEEGVADYIKTIGLFRTKAKNVVAASKLLLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEY 205
>gi|152970522|ref|YP_001335631.1| endonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238895013|ref|YP_002919747.1| endonuclease III [Klebsiella pneumoniae NTUH-K2044]
gi|330015733|ref|ZP_08308236.1| endonuclease III [Klebsiella sp. MS 92-3]
gi|150955371|gb|ABR77401.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238547329|dbj|BAH63680.1| endonuclease III [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328531088|gb|EGF57940.1| endonuclease III [Klebsiella sp. MS 92-3]
Length = 211
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P EL++ + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLAILTRLRENDPHPTTELHFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKDK 208
>gi|256027620|ref|ZP_05441454.1| endonuclease III [Fusobacterium sp. D11]
Length = 222
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 7 MTKKEKVKKILVELEKKFGEPKCALNFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ ++PQ ++ LT L G+GR
Sbjct: 67 TPEQFANMKLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEVPQDMDKLTELAGVGR 126
Query: 139 KGANVIL-SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SN IGL + P K+E L++I+P K N ++
Sbjct: 127 KTANVVRGDIWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWINFSHY 186
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 187 LILHGRATCIARRPRCSECEISKYCNYGIKK 217
>gi|254302476|ref|ZP_04969834.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148322668|gb|EDK87918.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 216
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILVELEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ ++PQ ++ LT L G+GR
Sbjct: 61 TPEQFANMKLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEVPQDMDKLTELAGVGR 120
Query: 139 KGANVIL-SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SN IGL + P K+E L++I+P K N ++
Sbjct: 121 KTANVVRGDIWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWINFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 181 LILHGRATCIARRPRCSECEISKYCNYGIKK 211
>gi|296159153|ref|ZP_06841980.1| endonuclease III [Burkholderia sp. Ch1-1]
gi|295890714|gb|EFG70505.1| endonuclease III [Burkholderia sp. Ch1-1]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLKSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+ +GE+ + YI+TIG+YR K++N+I+ IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PQKVFDLGEEGVAGYIKTIGLYRTKAKNVIATCRILLDQYGGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + + +AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFKQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|268589515|ref|ZP_06123736.1| endonuclease III [Providencia rettgeri DSM 1131]
gi|291315184|gb|EFE55637.1| endonuclease III [Providencia rettgeri DSM 1131]
Length = 213
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKSKRI-EILTRLRDNNPHPTTELEFNSPFELLIAVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ ++A+G ++ YI+TIG++ K+E++ ILI + ++++P+ E L LPG+GR
Sbjct: 60 TPEAIMALGVDGIKEYIKTIGLFNTKAESVYKTCQILIEKHNSQVPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE LL+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVVEVEDKLLKVVPAEFKVDCHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|293376428|ref|ZP_06622660.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325845046|ref|ZP_08168362.1| endonuclease III [Turicibacter sp. HGF1]
gi|292644937|gb|EFF63015.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325488922|gb|EGC91315.1| endonuclease III [Turicibacter sp. HGF1]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ EI + +P EL + N F L++AVLLSAQ+TD +VNK T+ LFE
Sbjct: 1 MVSKKKALEIIDVMETLFPDAHCELNFKNEFELVLAVLLSAQTTDKSVNKLTQTLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + + +L+ ++TIG+YR K++NI +LS IL++++D +P T E L +LPG+GR
Sbjct: 61 CPEDYIKVPLSELEQDVKTIGLYRNKAKNIQALSQILLDKYDGVVPSTFEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+ A T +VE L+++IP AH+
Sbjct: 121 KTANVVLSVGFGVPRIAVDTHVERISKRLDFAKKDDTVLEVENRLMKLIPENRWSKAHHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C A+ P+C++C + + CK K+
Sbjct: 181 MIFFGRYHCTAKNPKCETCPLFDACKEGKK 210
>gi|238919988|ref|YP_002933503.1| endonuclease III, [Edwardsiella ictaluri 93-146]
gi|238869557|gb|ACR69268.1| endonuclease III, putative [Edwardsiella ictaluri 93-146]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 140/209 (66%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI P P EL Y F L++AVLLSAQ+TDV+VNKAT LF A+
Sbjct: 1 MMNQAKRIEILRRLRDANPQPTTELIYSTPFELLIAVLLSAQATDVSVNKATATLFPAAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +LA+G ++ +I+TIG+Y K+ENII +L+ + ++P+ + L LPG+GR
Sbjct: 61 TPTALLALGVDGVKQHIKTIGLYNGKAENIIKTCRLLLEQHGGEVPENRQALEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGKT N+VE+ LL+++P + N H+WL
Sbjct: 121 KTANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKTVNEVEEKLLKVVPAEFALNCHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C AR+P+C SC+I +LC+ +
Sbjct: 181 ILHGRYTCIARRPRCGSCLIEDLCEFRDK 209
>gi|262044613|ref|ZP_06017668.1| endonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259038014|gb|EEW39230.1| endonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 211
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P EL++ + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLAILTRLRENDPHPTTELHFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFSWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYKDK 208
>gi|158425308|ref|YP_001526600.1| endonuclease III/Nth precursor [Azorhizobium caulinodans ORS 571]
gi|158332197|dbj|BAF89682.1| endonuclease III/Nth precursor [Azorhizobium caulinodans ORS 571]
Length = 359
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 150/205 (73%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ ++ E F F P PKGEL Y + FTL+VAV+LSAQ+TDV VNKAT+ LF A T
Sbjct: 150 WSDDDIFEAFSRFERLNPEPKGELEYHDPFTLLVAVVLSAQATDVGVNKATRGLFAAAPT 209
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ M A+GE+ + +IRT+G+YR K++N++ LS +L+ + D +P E L LPG+GRK
Sbjct: 210 PKAMFALGEEGVAQFIRTLGLYRGKAKNVVELSRLLLEKHDGVVPPDREALEALPGVGRK 269
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG+PTI VDTH+FR++NR GLAPG TP VE +L + IP + + +AH+WL+
Sbjct: 270 TANVVLNIAFGLPTIAVDTHLFRVANRTGLAPGATPLDVELALEKRIPDRFKLHAHHWLI 329
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+CKA +P C C I++LC+
Sbjct: 330 LHGRYICKALRPDCPICPINDLCRW 354
>gi|260072660|gb|ACX30557.1| endoIII-related endonuclease [uncultured SUP05 cluster bacterium]
gi|269468420|gb|EEZ80085.1| EndoIII-related endonuclease [uncultured SUP05 cluster bacterium]
Length = 210
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E+F P+P EL Y F L+VAV LSAQ+TD +VNKAT LF IA+T
Sbjct: 1 MNAETRSEMFGRLLKNIPNPTTELNYSTPFELLVAVTLSAQATDKSVNKATDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +GE L+N I+TIG++ K+++II ILI ++D+ +P+T + L LPG+GRK
Sbjct: 61 PETIFELGEDTLRNTIKTIGLFNSKAKHIIQACKILIEKYDSAVPETRKELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R++NR +A GKT +VE+ L++ IP + + AH+ ++
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLIKFIPDEFRVPAHHLMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKAR P C C++ +LC+ ++
Sbjct: 181 LHGRYTCKARSPLCNECVLLDLCEYEEK 208
>gi|220931920|ref|YP_002508828.1| endonuclease III [Halothermothrix orenii H 168]
gi|219993230|gb|ACL69833.1| endonuclease III [Halothermothrix orenii H 168]
Length = 212
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 92/203 (45%), Positives = 129/203 (63%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L+E+ F ++P+P EL + F L++A +LSAQSTD VNK TK LF+ P
Sbjct: 7 LQELIKYFEDRYPAPDTELNFSTPFELLIATILSAQSTDRQVNKVTKKLFKKYKNPGDFA 66
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ K L+ I +IG+YR KS+ II +S+ILI E+ K+P T + L +LPG+GRK ANV+
Sbjct: 67 SLDRKTLEREINSIGLYRNKSKYIIEVSNILIKEYGGKVPGTRKELLKLPGVGRKTANVV 126
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ AF T VDTH+FRISNR+GL K N+ E+ L+ +IP + + H+WL+ HGR
Sbjct: 127 LACAFNKKTFPVDTHVFRISNRLGLVSAKRTNEAEKQLMEVIPEEKWVDMHHWLIFHGRE 186
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VCKAR P C C + C K+
Sbjct: 187 VCKARNPACHFCELKPFCNYYKK 209
>gi|325106521|ref|YP_004276175.1| endonuclease III [Pedobacter saltans DSM 12145]
gi|324975369|gb|ADY54353.1| endonuclease III [Pedobacter saltans DSM 12145]
Length = 239
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + FS P + EL+Y N F L++AV+LSAQ TD +N+ T LFE
Sbjct: 1 MLKKDRYKAFVEYFSTHQPQAETELHYNNPFELLIAVILSAQCTDKRINQVTPKLFERYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + +++ YIR++ KS++++ ++ IL+NEF+ +P+ ++ L ++PG+GR
Sbjct: 61 TPESLASATPEEVFAYIRSVSYPNNKSKHLVGMAKILLNEFNGIVPEDVKDLQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR++NRIGL KTP VE+ L+ +P + AH+W
Sbjct: 121 KTANVISSVIYHAPAMAVDTHVFRVANRIGLTTNAKTPLAVEKQLVAHLPQDKIHIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+C AR P+C C ++ CK Q
Sbjct: 181 LILHGRYICLARSPKCDICPLTGFCKYYAQ 210
>gi|38232925|ref|NP_938692.1| endonuclease III [Corynebacterium diphtheriae NCTC 13129]
gi|38199183|emb|CAE48808.1| endonuclease III [Corynebacterium diphtheriae]
Length = 251
Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 106/206 (51%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I + +P EL + N L VA +LSAQ TDV VN+ T LF T +
Sbjct: 16 KRRARAINRELAKAYPDAHCELDFNNPLELTVATVLSAQCTDVRVNQITPALFAKYPTAE 75
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E +LQ IR G Y+ K+ ++I + L+ +F +IP+ LE L LPG+GRK A
Sbjct: 76 AYASANEAELQEMIRPTGFYKAKAAHLIGMGQKLVTDFSGEIPRDLESLVSLPGVGRKTA 135
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+V+ AF IP + VDTH R+ R+GL P KVE + +I K + ++ H
Sbjct: 136 HVVRGNAFDIPGLTVDTHFGRLVRRLGLTTQTNPVKVEHEIADLIEKKEWTMFSHRIIFH 195
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GR VC +R C +C ++ C +
Sbjct: 196 GRRVCHSRTAACGACFLAPRCPSYGE 221
>gi|295675946|ref|YP_003604470.1| endonuclease III [Burkholderia sp. CCGE1002]
gi|295435789|gb|ADG14959.1| endonuclease III [Burkholderia sp. CCGE1002]
Length = 214
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLQSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRRMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+ +GE+ + +YI+TIG+YR K++N+I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PQKVFDLGEEGVASYIKTIGLYRTKAKNVIATCRILLDQYGGEVPEDRAALEGLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG TI VDTHIFR++NR GLAPGK VE +L + P + + +AH+WL+
Sbjct: 121 TANVILNTAFGHSTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFKKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|310829098|ref|YP_003961455.1| endonuclease III [Eubacterium limosum KIST612]
gi|308740832|gb|ADO38492.1| endonuclease III [Eubacterium limosum KIST612]
Length = 213
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 134/208 (64%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +++ + K L + + F L++A +LSAQ TDV VN T LF+ +T
Sbjct: 1 MNKENRKKVLDELEKLYGGEKCGLDFTSPFELLIATMLSAQCTDVRVNIVTGELFKEYNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K+L + E +L+ I++ G+ K++NI+ H+L++E++ +P+T+E L +LPG+GRK
Sbjct: 61 PEKLLTLNEGELREKIKSCGLSNTKAKNILLTCHMLLSEYNGVVPETMEELIKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++S AF +P I VDTH+FR+S RIGLA G +VE+ L++ IP + AH+WL+
Sbjct: 121 TANVVMSNAFDVPAIAVDTHVFRVSRRIGLAKGNNVLQVEKELMKNIPRDYWSRAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +C AR P+C+SC I+ C K+
Sbjct: 181 WHGRRLCTARNPKCESCAINPYCDDYKK 208
>gi|312862650|ref|ZP_07722890.1| endonuclease III [Streptococcus vestibularis F0396]
gi|322516627|ref|ZP_08069541.1| endonuclease III [Streptococcus vestibularis ATCC 49124]
gi|311101510|gb|EFQ59713.1| endonuclease III [Streptococcus vestibularis F0396]
gi|322124897|gb|EFX96321.1| endonuclease III [Streptococcus vestibularis ATCC 49124]
Length = 214
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + E L +P GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 1 MLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGLWARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+GR
Sbjct: 61 EIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAVLMNFDGQVPKTHKELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +GIP+I VDTH+ R+S R+ +AP + ++E L++ IP K +H+
Sbjct: 121 KTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWIISHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY C A+ P+CQ+C + + CK +
Sbjct: 181 MIFFGRYHCLAKNPKCQTCPLQSYCKYYR 209
>gi|49474903|ref|YP_032944.1| endonuclease III [Bartonella henselae str. Houston-1]
gi|49237708|emb|CAF26897.1| Endonuclease III [Bartonella henselae str. Houston-1]
Length = 246
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 117/223 (52%), Positives = 164/223 (73%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ K + G LY+ E+EEIF FS++ P+PK +L Y N FTL++AV+LSAQ+
Sbjct: 1 MTHKTIKLSKEKKVAGILYSEDEIEEIFRRFSIQRPTPKSDLIYTNVFTLLIAVVLSAQA 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD +VNK TK LF +AD P+KM+A+GE+++ +IRT+G++R K+ NI +L LI+ +
Sbjct: 61 TDASVNKVTKELFRLADQPEKMVALGEEEIARHIRTVGLWRAKARNIYALCSFLIDHYGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E L LPG+GRK ANV+L++AFG PT+ VDTHI R+ NR+GLAPGKTP VE+
Sbjct: 121 QVPDNREALMALPGVGRKTANVVLNVAFGWPTLAVDTHILRLGNRLGLAPGKTPEIVEEK 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
LL+IIP ++ AH+WLVLHGRY+C+ARK QC CII++LCK
Sbjct: 181 LLKIIPFRYLRYAHHWLVLHGRYICQARKAQCTRCIIADLCKA 223
>gi|313676276|ref|YP_004054272.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Marivirga tractuosa DSM 4126]
gi|312942974|gb|ADR22164.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Marivirga tractuosa DSM 4126]
Length = 219
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E FS P + EL+Y N + L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MTRKERYEAFLEYFSKNQPQAETELHYENPYQLLVAVILSAQCTDKRVNIVTPALFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + ++ YI++I K+++++ ++ IL+ EF++ +P+++E L ++PG+GR
Sbjct: 61 TPEHLASSHFDEVLPYIKSISFMNNKTKHLLGMAKILVEEFNSVVPESIEDLQKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ + P + VDTH+FR+S R+GL TP +VE++L++ IP ++ + AH+
Sbjct: 121 KTANVIASVIYNQPAMAVDTHVFRVSKRLGLVNQNAKTPLEVEKTLIKHIPSEYVHVAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRYVC AR+P+C+ C I++LC+ ++
Sbjct: 181 WLILHGRYVCVARRPKCEECKITHLCRYFEK 211
>gi|123442259|ref|YP_001006240.1| endonuclease III [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|332161845|ref|YP_004298422.1| endonuclease III [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|122089220|emb|CAL12066.1| endonuclease III [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|318605652|emb|CBY27150.1| endonuclease III [Yersinia enterocolitica subsp. palearctica Y11]
gi|325666075|gb|ADZ42719.1| endonuclease III [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 213
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQEKRVAILTRLRDNDPHPTTELVYSTPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGVDGLKSYIKTIGLFNTKAENVIKTCRILLEKHHGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APG ++VE LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEAKLLKVVPAEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|323702821|ref|ZP_08114480.1| endonuclease III [Desulfotomaculum nigrificans DSM 574]
gi|323532209|gb|EGB22089.1| endonuclease III [Desulfotomaculum nigrificans DSM 574]
Length = 223
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 123/203 (60%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T + I + +P +L + F L+VAV+LSAQSTD VNK T LF+ TP
Sbjct: 11 TVRRANLIARRLAEAYPEATTDLKFSTPFELMVAVILSAQSTDAQVNKITAKLFKKYRTP 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++L I+ G++R KS+ I+ S IL++++ K+P+ E L +LPG+GRK
Sbjct: 71 EDFARLTPEQLAEDIKGCGLFRNKSKFIVEASKILVDKYGGKVPENRETLEKLPGVGRKT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVIL +AFG T VDTH+ R++ R+GL+ GKTP + EQ L + PP+ AH+ ++
Sbjct: 131 ANVILGVAFGHHTFPVDTHVHRVARRLGLSQGKTPEQTEQDLCALFPPELWQRAHHQIIY 190
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
HGR VC AR P+C C + LC
Sbjct: 191 HGRRVCDARNPRCWECCLKELCP 213
>gi|295691588|ref|YP_003595281.1| endonuclease III [Caulobacter segnis ATCC 21756]
gi|295433491|gb|ADG12663.1| endonuclease III [Caulobacter segnis ATCC 21756]
Length = 237
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/223 (46%), Positives = 151/223 (67%), Gaps = 1/223 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
VS+K + + + + +E +F F PK EL Y N + L+ AV LSAQ+
Sbjct: 9 VSAKSKPAKKTAKRISPAER-ERVEVLFERFEGLELRPKTELNYANPYELVTAVALSAQA 67
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV+VNKAT LF++A+TPQ ML +GE L YI +IG+YR K++N+I+ ++IL++++
Sbjct: 68 TDVSVNKATDKLFKVANTPQAMLDLGEAGLIPYIASIGLYRTKAKNVIATANILVSQYGG 127
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P L LPG+GRK A+V+L+ P I VDTH+FR+S+R+ L+ GKTP+ VEQ
Sbjct: 128 QVPLNRAALESLPGVGRKTASVVLNELDIEPAIAVDTHVFRVSHRLKLSSGKTPDAVEQD 187
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+RI+P +Q AH+WL+LHGRYVC ARKP+C+ C IS+LC
Sbjct: 188 LMRIVPVPYQTRAHHWLILHGRYVCVARKPKCEICKISDLCPS 230
>gi|304393063|ref|ZP_07374992.1| endonuclease III [Ahrensia sp. R2A130]
gi|303294828|gb|EFL89199.1| endonuclease III [Ahrensia sp. R2A130]
Length = 226
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 120/200 (60%), Positives = 159/200 (79%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
IF F L+ P PKGEL +VN FTL+VAV LSAQ+TDV VNKAT+ LF IADTP+KMLA+G
Sbjct: 4 IFERFRLQRPEPKGELEHVNPFTLVVAVALSAQATDVGVNKATRRLFPIADTPEKMLALG 63
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+ ++ IRTIG+YR K++N+I+LS L+++F + +PQT E L LPG+GRK ANV++SM
Sbjct: 64 EEGVREAIRTIGLYRNKAKNVIALSQKLVDDFGSVVPQTREELVTLPGVGRKTANVVMSM 123
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFGIPT+ VDTHI RI NR+G+APGKTP+ +E L+ +P + Y+AH+WL+LHGRY CK
Sbjct: 124 AFGIPTMAVDTHILRIGNRMGIAPGKTPDDIEAILMARVPEDYLYHAHHWLILHGRYTCK 183
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
AR P C+ CII++LCK ++
Sbjct: 184 ARTPLCEECIIADLCKAKEK 203
>gi|291617333|ref|YP_003520075.1| Nth [Pantoea ananatis LMG 20103]
gi|291152363|gb|ADD76947.1| Nth [Pantoea ananatis LMG 20103]
gi|327393778|dbj|BAK11200.1| endonuclease III Nth [Pantoea ananatis AJ13355]
Length = 210
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/205 (46%), Positives = 136/205 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQTKRTEILSRLQQANPHPTTELQFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G ++ YI+TIG++ K+EN+I IL+ + +P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGVVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVEQVEEKLLKVVPKAFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C +C+I +LC+
Sbjct: 181 LHGRYTCVARKPRCGACLIEDLCEY 205
>gi|161869460|ref|YP_001598627.1| endonuclease III [Neisseria meningitidis 053442]
gi|161595013|gb|ABX72673.1| endonuclease III [Neisseria meningitidis 053442]
Length = 223
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 142/199 (71%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 21 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 80
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G + Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK ANV+L
Sbjct: 81 LGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRKTANVVL 140
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AFG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY
Sbjct: 141 NTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYT 200
Query: 206 CKARKPQCQSCIISNLCKR 224
CKA KPQCQ+CII++LC+
Sbjct: 201 CKALKPQCQTCIINDLCEY 219
>gi|94497576|ref|ZP_01304145.1| endonuclease III [Sphingomonas sp. SKA58]
gi|94422993|gb|EAT08025.1| endonuclease III [Sphingomonas sp. SKA58]
Length = 234
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + F + P+P+ EL Y N + L+VAV+LSAQ+TDV VNKAT+ LF T
Sbjct: 1 MNKTQIFDFFSRLADANPAPQTELDYGNDYQLLVAVVLSAQATDVGVNKATRALFREIHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+M+ +GE L+ +I+TIG++ K++N+I+LS IL+ +F ++PQ + LT LPG+GRK
Sbjct: 61 PQQMIDLGEDGLKQHIKTIGLFNAKAKNVIALSAILVRDFGGQVPQDRDTLTTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG VDTHIFR+ NR GLA GKT VEQ L + +P + +AH+WL+
Sbjct: 121 TANVVVNTAFGQEAFAVDTHIFRVGNRTGLALGKTVLAVEQKLDKRVPAPFRRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C CI+++LC+
Sbjct: 181 LHGRYVCKARRPECWHCIVADLCRY 205
>gi|331006426|ref|ZP_08329729.1| Endonuclease III [gamma proteobacterium IMCC1989]
gi|330419726|gb|EGG94089.1| Endonuclease III [gamma proteobacterium IMCC1989]
Length = 217
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 113/204 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I +P P L + + +TL+VAVLLSAQ TD VNK T L+++AD
Sbjct: 1 MLKKERAAYILEKLESLYPEPPIPLDHKDPYTLLVAVLLSAQCTDERVNKITPLLWQLAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M + ++++ IR G+ +KS+ I LS +L+N++D ++P ++ L LPG+G
Sbjct: 61 NPFDMAKVPIEEIKAVIRPCGLSPQKSKAISVLSQMLVNQYDGEVPVDMDALETLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AF IP VDTHI R++ R GL GK + E+ L R+ P H +
Sbjct: 121 KTASVVMSQAFDIPAFAVDTHIHRLAQRWGLTNGKNVTQTEKDLKRLFPKDRWNKLHVQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR +C I C
Sbjct: 181 IYYGREYCTARSCYGLTCPICTTC 204
>gi|300790634|ref|YP_003770925.1| endonuclease III [Amycolatopsis mediterranei U32]
gi|299800148|gb|ADJ50523.1| endonuclease III [Amycolatopsis mediterranei U32]
Length = 227
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 106/194 (54%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+P EL + L+VAV+LSAQ+TDV VN T LF+ T +L
Sbjct: 5 LDDVYPDAHCELDFTTPLELLVAVVLSAQTTDVRVNLVTPALFKRYRTAADYAGADRAEL 64
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ Y+R+ G YR K+ +++ L L+ FD ++P LE L LPG+GRK ANV+L AF +
Sbjct: 65 EEYLRSTGFYRAKANSVMGLGAALVERFDGEVPAKLEDLVTLPGVGRKTANVVLGNAFDV 124
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R G + P KVE ++ +IP K + ++ HGR VC A+KP
Sbjct: 125 PGITVDTHFGRLVRRWGWTAEEDPVKVEHAIGELIPRKEWTMLSHRVIFHGRRVCHAKKP 184
Query: 212 QCQSCIISNLCKRI 225
C +C ++ C
Sbjct: 185 ACGACPLARDCPSY 198
>gi|317047957|ref|YP_004115605.1| endonuclease III [Pantoea sp. At-9b]
gi|316949574|gb|ADU69049.1| endonuclease III [Pantoea sp. At-9b]
Length = 210
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/205 (46%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I + P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQDKRVQILTRLRDENPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ YI+TIG++ K+EN+I IL+ + +++P+ L LPG+GRK
Sbjct: 61 PASLLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGSEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK +VE+ LL+++P + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEEVEEKLLKVVPKAFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C SC+I +LC+
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEF 205
>gi|257470784|ref|ZP_05634874.1| endonuclease III [Fusobacterium ulcerans ATCC 49185]
Length = 376
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 131/224 (58%), Gaps = 5/224 (2%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
K+ S +G + + +++++I K+ PK L Y F L+VAV+LSAQ TD
Sbjct: 153 EKRMKSSEGKT----MTKKEKVKKILEKLHEKFGDPKCALDYKTPFELLVAVILSAQCTD 208
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V VN TK +++ +TP+ A+ +K++ I++ G +R K++NI S L+++++ +I
Sbjct: 209 VRVNIVTKEMYKKVNTPEGFAALPVEKIEEMIKSTGFFRNKAKNIKLCSQQLLSKYNGEI 268
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
P+ ++ L L G+GRK ANV+ +G I VDTH+ R++N IGL P K+EQ L
Sbjct: 269 PKDMDKLIELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNLIGLVKNDDPVKIEQEL 328
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++I+P K + ++L+L GR C AR+P+C C I C K
Sbjct: 329 MKIVPKKDWIDFSHYLILQGRDKCIARRPKCSECEIREFCNHGK 372
>gi|291294869|ref|YP_003506267.1| endonuclease III [Meiothermus ruber DSM 1279]
gi|290469828|gb|ADD27247.1| endonuclease III [Meiothermus ruber DSM 1279]
Length = 235
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 125/221 (56%), Gaps = 1/221 (0%)
Query: 3 SSKKSDSYQGNSPLGCLY-TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
S K D QG+S L + + I + +P EL + N F L++A +LSAQ+
Sbjct: 9 SPKPKDKAQGSSGRESLKAKKQRAQRILAVMEQLYPQAATELQHKNPFELLIATVLSAQA 68
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD +VNKAT LF+ + ++++ YI+TIG+YR K+ NI+ L+ L+ +
Sbjct: 69 TDASVNKATPALFQRYPDAFALAQATPEEVEPYIKTIGLYRSKARNIVLLARRLVEQHGG 128
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P L LPG+G K A V+L AFG+P I VDTH+ R++ R+GL+ K P K+
Sbjct: 129 EVPVDKAKLRALPGVGWKTATVVLGAAFGVPGIAVDTHLTRLAARLGLSAQKDPEKIGGD 188
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L R+ P + H+ L+L GRY C ARKPQC C + + C
Sbjct: 189 LERLFPKEKWVFVHHALILFGRYRCTARKPQCPGCPLYDDC 229
>gi|118594438|ref|ZP_01551785.1| endonuclease III [Methylophilales bacterium HTCC2181]
gi|118440216|gb|EAV46843.1| endonuclease III [Methylophilales bacterium HTCC2181]
Length = 209
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF L P + EL Y + F L++AV+LSAQ+TD++VNKAT +LF++A T
Sbjct: 1 MNAQKRSEIFSLLKKSIPKAQTELIYNSPFQLLIAVILSAQATDISVNKATFNLFKVAST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+++ + +K+++YI+TIG+Y+ K++NI++ S ++ + D +P + L LPG+GRK
Sbjct: 61 AKELSELPLEKIESYIKTIGLYKTKAKNILATSKMIYLDHDGNVPHDRQVLESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ FG P I VDTHIFR++NRI LA GK P +VE+ L ++IP + +AH+ L+
Sbjct: 121 TANVILNTIFGDPVIAVDTHIFRLANRINLAKGKNPLEVERRLTKLIPSDYLVDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+CKA KP C CII C+ +
Sbjct: 181 LHGRYICKAIKPLCTQCIIYQQCEFRGK 208
>gi|206577080|ref|YP_002238209.1| endonuclease III [Klebsiella pneumoniae 342]
gi|288935197|ref|YP_003439256.1| endonuclease III [Klebsiella variicola At-22]
gi|290509255|ref|ZP_06548626.1| endonuclease III [Klebsiella sp. 1_1_55]
gi|206566138|gb|ACI07914.1| endonuclease III [Klebsiella pneumoniae 342]
gi|288889906|gb|ADC58224.1| endonuclease III [Klebsiella variicola At-22]
gi|289778649|gb|EFD86646.1| endonuclease III [Klebsiella sp. 1_1_55]
Length = 211
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I P P EL++ + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLAILTRLRENDPHPTTELHFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G +++YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|237743208|ref|ZP_04573689.1| endonuclease III [Fusobacterium sp. 7_1]
gi|289765578|ref|ZP_06524956.1| endonuclease III [Fusobacterium sp. D11]
gi|229433504|gb|EEO43716.1| endonuclease III [Fusobacterium sp. 7_1]
gi|289717133|gb|EFD81145.1| endonuclease III [Fusobacterium sp. D11]
Length = 216
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILVELEKKFGEPKCALNFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ ++PQ ++ LT L G+GR
Sbjct: 61 TPEQFANMKLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEVPQDMDKLTELAGVGR 120
Query: 139 KGANVIL-SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SN IGL + P K+E L++I+P K N ++
Sbjct: 121 KTANVVRGDIWGLADGITVDTHVKRLSNLIGLVDSEDPIKIELELMKIVPKKSWINFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 181 LILHGRATCIARRPRCSECEISKYCNYGIKK 211
>gi|325474750|gb|EGC77936.1| endonuclease III [Treponema denticola F0402]
Length = 210
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 109/204 (53%), Positives = 154/204 (75%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L ++EE++ F P+PKGEL+ N FTL+VAV+LSAQ+TDV VNKAT F+ AD
Sbjct: 3 LLDKDKIEEVYRRFKKNNPNPKGELHSANIFTLLVAVVLSAQATDVGVNKATGPFFKAAD 62
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM+ +GE+ ++ YI+TI +Y K++ I LS I+ NE+ ++P T+E L +LPG+GR
Sbjct: 63 TPQKMIELGEEGIREYIKTINLYPTKAKRIFELSCIIQNEYAGRVPDTMEELIKLPGVGR 122
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+M FG P I VDTHI R + RIGL+ GKTP +VE+ LL++ P K+ NAH+W+
Sbjct: 123 KTANVVLNMGFGKPAIAVDTHILRTAPRIGLSSGKTPIQVEEDLLKVTPKKYLLNAHHWI 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+LHGRY+CKARKP+C++C +S++C
Sbjct: 183 LLHGRYICKARKPECETCFLSDIC 206
>gi|325001416|ref|ZP_08122528.1| putative endonuclease III [Pseudonocardia sp. P1]
Length = 266
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
G +P+G + + I + +P EL + L VA +LSAQ TD VN+ T
Sbjct: 23 GENPIG---RARRVNRILRALAEAYPHAHCELDFSTPLDLAVATILSAQCTDERVNQVTP 79
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF T +L+ IR G YR K+ ++ L ++ + ++P TL+ L
Sbjct: 80 ALFARYPTAAGYAGADRTELEELIRPTGFYRNKANSLTGLGAAVVEKHGGELPATLDELV 139
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPGIGRK ANVIL AF +P I VDTH R+ R G + P KVE ++ ++P +
Sbjct: 140 ALPGIGRKTANVILGNAFDVPGITVDTHFGRLVRRWGWTTEEDPVKVEHAVGELVPRRDW 199
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ HGR VC +RKP C +C ++ C
Sbjct: 200 TIVSHHVIFHGRRVCHSRKPACGACTLAPDCPSY 233
>gi|90022249|ref|YP_528076.1| endonuclease III [Saccharophagus degradans 2-40]
gi|89951849|gb|ABD81864.1| endonuclease III [Saccharophagus degradans 2-40]
Length = 227
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M ++ K+ + + +E I +P L + + +TL+VAVLLSAQ
Sbjct: 1 MTNTSKAPVN--------MLKAERVEYILNELERLYPETPVPLDHKDPYTLLVAVLLSAQ 52
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
TD VN+ T L+++AD P M + ++ IR G+ +KS+ I LS IL+++++
Sbjct: 53 CTDERVNQITPALWQLADNPFDMAKQSVEDIKAIIRPCGLSPQKSKAIQGLSQILVDKYN 112
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++PQ + L LPG+G K A+V+++ +FGIP VDTHI R++ R GL GK + E+
Sbjct: 113 GEVPQDMALLEELPGVGHKTASVVVAQSFGIPAFPVDTHIHRLAQRWGLTSGKNVTQTEK 172
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L R+ P + H ++ +GR C AR Q +C I C
Sbjct: 173 DLKRLFPKEKWNKLHLQIIFYGREYCTARGCQGTTCPICTTC 214
>gi|121595475|ref|YP_987371.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Acidovorax sp. JS42]
gi|120607555|gb|ABM43295.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Acidovorax sp. JS42]
Length = 216
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P+++E F P P EL Y N F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKPQDIEPFFAALQAANPQPNTELEYTNVFELLAAVLLSAQATDVGVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+YR K++N++ IL+ + ++P+T E L LPG+GRK
Sbjct: 61 PQAVLDLGLDGLEGYIKTIGLYRTKAKNLMQTCRILVEQHGGQVPRTREALQALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+ NR GLAPGK P VE LL+ +PP++ +AH+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVGNRTGLAPGKNPLAVEMQLLQRVPPQYLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C+++ C
Sbjct: 181 LLGRYVCQARKPRCWECVVAPWCDY 205
>gi|116748504|ref|YP_845191.1| endonuclease III [Syntrophobacter fumaroxidans MPOB]
gi|116697568|gb|ABK16756.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Syntrophobacter fumaroxidans MPOB]
Length = 227
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/219 (36%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
K+ S + P +++ I + +P L + N L+VA +LSAQ TD
Sbjct: 7 KTPSKRKRPPA------EKVRAIVEILDRTYPDAACSLDFRNPLELLVATVLSAQCTDER 60
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN T LF+ T + ++L+ +++ G YR K+ NI +L E +IP
Sbjct: 61 VNLVTPALFQRYPTAKAYADAPLEQLETDVKSTGFYRNKARNIKEACRVLAEEHGGEIPP 120
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
L+ L +LPGIGRK ANVIL AFGIP I VDTH+ R+S R+GL K P K+E+ L+ I
Sbjct: 121 NLDILVKLPGIGRKTANVILGNAFGIPGIVVDTHVGRVSERLGLTSEKDPEKIERDLMEI 180
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
IP + + L+ GR +C+ARKP+ C + C
Sbjct: 181 IPREKWIKFCHQLIGLGREICQARKPKTGVCPLRPHCDH 219
>gi|222111689|ref|YP_002553953.1| endonuclease iii [Acidovorax ebreus TPSY]
gi|221731133|gb|ACM33953.1| endonuclease III [Acidovorax ebreus TPSY]
Length = 216
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P+++E F P P EL Y N F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKPQDIEPFFAALQAANPQPNTELEYTNVFELLAAVLLSAQATDVGVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+YR K++N++ IL+ + ++P+T E L LPG+GRK
Sbjct: 61 PQAVLELGLDGLEGYIKTIGLYRTKAKNLMQTCRILVEQHGGQVPRTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+ NR GLAPGK P VE LL+ +PP++ +AH+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVGNRTGLAPGKNPLAVEMQLLQRVPPQYLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C+++ C
Sbjct: 181 LLGRYVCQARKPRCWECVVAPWCDY 205
>gi|224588325|gb|ACN58949.1| endonuclease III [uncultured bacterium BLR10]
Length = 215
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 146/208 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + E+F F P P+ EL Y F L++AVLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MNPAKRYEMFVRFRAANPKPETELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE++L+ YI+TIG+Y+ K+ N++S +L+ ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGEEELKTYIQTIGLYKTKARNVMSTCRMLVELHGGEVPRDRISLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PT+ VDTHIFR+SNR GLAPGK VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVMNTAFGEPTMAVDTHIFRVSNRTGLAPGKNVEIVEQKLLKFVPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKARKP+C +C+ +LC +
Sbjct: 181 LHGRYTCKARKPECWNCMQIDLCDYRAK 208
>gi|270158205|ref|ZP_06186862.1| endonuclease III [Legionella longbeachae D-4968]
gi|289163538|ref|YP_003453676.1| Endonuclease III [Legionella longbeachae NSW150]
gi|269990230|gb|EEZ96484.1| endonuclease III [Legionella longbeachae D-4968]
gi|288856711|emb|CBJ10522.1| Endonuclease III [Legionella longbeachae NSW150]
Length = 211
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 148/205 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EIF F + P P EL Y + F L++AV+LSAQ+TDV VNKAT LF +A+T
Sbjct: 1 MNKQKRREIFLRFQAQNPHPITELVYHSSFELLIAVILSAQATDVGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ++L +G +KL+ YI++IG+Y K++NII +LI + K+P+ E L LPG+GRK
Sbjct: 61 PQEILDLGLEKLKEYIKSIGLYNSKAQNIIKTCEMLIKNYHGKVPEQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR++NR G+A GKTP +VE++L++ + +AH+WLV
Sbjct: 121 TANVVLNTAFGQPTVAVDTHIFRVANRTGIAKGKTPLEVEKNLIKNTASEFLKDAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP C+SCII +LC+
Sbjct: 181 LHGRYVCTARKPHCKSCIIEDLCEY 205
>gi|55823139|ref|YP_141580.1| endonuclease III, DNA repair [Streptococcus thermophilus CNRZ1066]
gi|55739124|gb|AAV62765.1| endonuclease III, DNA repair [Streptococcus thermophilus CNRZ1066]
Length = 219
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K + E L +P GEL + F L+VAV+LSAQ+TD VNK T L+
Sbjct: 4 SIMLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGLWAR 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + + ++ +RTIG+Y+ K++NII + ++ FD ++P+T + L LPG+
Sbjct: 64 YPEIEDLASANLNDVEMCLRTIGLYKNKAKNIIKTARAILMNFDGQVPKTHKELESLPGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV+L+ +GIP+I VDTH+ R+S R+ +AP + ++E L++ IP K +H
Sbjct: 124 GRKTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWIISH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ GRY C A+ P+CQ+C + C+ ++
Sbjct: 184 HRMIFFGRYHCLAKNPKCQTCPLQRYCEYYRE 215
>gi|304397714|ref|ZP_07379591.1| endonuclease III [Pantoea sp. aB]
gi|308186742|ref|YP_003930873.1| endonuclease III [Pantoea vagans C9-1]
gi|304354886|gb|EFM19256.1| endonuclease III [Pantoea sp. aB]
gi|308057252|gb|ADO09424.1| endonuclease III [Pantoea vagans C9-1]
Length = 210
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQTKRTEILHRLQQNNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G ++ YI+TIG++ K+EN+I IL+ + + ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR APGK +VEQ LL+++P ++ + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAPGKNVEEVEQKLLKVVPAAYKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C ARKP+C SC+I +LC+
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEY 205
>gi|242239353|ref|YP_002987534.1| endonuclease III [Dickeya dadantii Ech703]
gi|242131410|gb|ACS85712.1| endonuclease III [Dickeya dadantii Ech703]
Length = 211
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL+Y F L+++VLLSAQ+TDV+VNKAT L+ IA+T
Sbjct: 1 MNKEKRIGILTRLRDNDPHPTTELHYNTPFELLISVLLSAQATDVSVNKATATLYAIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + ++ YI+TIG++ K+ENII HIL+ ++P+ L LPG+GRK
Sbjct: 61 PQAMLELGAEGIKGYIKTIGLFNTKAENIIKTCHILLERHQGQVPEDRTALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPDEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEFKEK 208
>gi|212711761|ref|ZP_03319889.1| hypothetical protein PROVALCAL_02836 [Providencia alcalifaciens DSM
30120]
gi|212685283|gb|EEB44811.1| hypothetical protein PROVALCAL_02836 [Providencia alcalifaciens DSM
30120]
Length = 213
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKTKRI-EILTRLRDNNPHPTTELEFSSPFELLISVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M+A+G ++ YI+TIG++ K+E++ ILI + +++P+ E L LPG+GR
Sbjct: 60 TPEQMVALGVDGIKEYIKTIGLFNTKAESVYKTCQILIEKHQSQVPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKDVVEVEEKLLKVVPAEFKVDCHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|296118073|ref|ZP_06836655.1| endonuclease III [Corynebacterium ammoniagenes DSM 20306]
gi|295968959|gb|EFG82202.1| endonuclease III [Corynebacterium ammoniagenes DSM 20306]
Length = 218
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 112/206 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E I + + +P EL + N L VA +LSAQ+TDV VN+ T LF+
Sbjct: 1 MVNAHRAEYINEVLTQTYPDAHCELDFTNALELTVATVLSAQTTDVRVNQVTPDLFKAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+++ IR +G+ K++ ++ L L+ +FD ++P ++ LT LPG+GR
Sbjct: 61 RAIDYAQADVTDIEDIIRPLGLAPSKAKRLVGLGQKLVGDFDGEVPTSIADLTSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V+ AFG+P + VDTH+ R+++R+GLA G T KVE+ L +P + L
Sbjct: 121 KTALVVRGNAFGLPGLAVDTHVKRVASRLGLAQGATELKVEKELCEQLPEAEWTMFSHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR C A+KP C C + ++C
Sbjct: 181 IFHGRRCCTAKKPDCAGCPLRDVCPF 206
>gi|183599245|ref|ZP_02960738.1| hypothetical protein PROSTU_02704 [Providencia stuartii ATCC 25827]
gi|188021475|gb|EDU59515.1| hypothetical protein PROSTU_02704 [Providencia stuartii ATCC 25827]
Length = 213
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P+P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+
Sbjct: 1 MNKSKRI-EILTRLRDNNPNPTTELQFNSPFELLIAVLLSAQATDVSVNKATAKLYPVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ MLA+G ++ YI+TIG++ K+E++I ILI + ++++P+ L LPG+GR
Sbjct: 60 TPEAMLALGVDGIKEYIKTIGLFNTKAESVIKTCKILIEKHNSQVPEDRSALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVVEVEEKLLKVVPTEFKVDCHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|308184368|ref|YP_003928501.1| endonuclease III [Helicobacter pylori SJM180]
gi|308060288|gb|ADO02184.1| endonuclease III [Helicobacter pylori SJM180]
Length = 213
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 118/205 (57%), Gaps = 1/205 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L K+ ++I L +P+ EL + N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 2 SLKRAKKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFEKY 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G+G
Sbjct: 62 PSVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
+K ANV+LS+ F I VDTH+FR ++R+GL+ KTP K E+ L + + H+
Sbjct: 122 QKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNAKTPIKTEKELSELF-KDNLSKLHHA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+L GRY CKA+ P C +C + C
Sbjct: 181 LILFGRYTCKAKNPLCDACFLKEFC 205
>gi|172041546|ref|YP_001801259.1| endonuclease III [Corynebacterium urealyticum DSM 7109]
gi|171852850|emb|CAQ05826.1| endonuclease III [Corynebacterium urealyticum DSM 7109]
Length = 289
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S + +D +PL + ++ +L +P EL + L+VA +LSAQ T
Sbjct: 38 SHRAADPSHVETPLAL---KRRARKLNRTLALGYPDAHAELDFSTPLELLVATVLSAQCT 94
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VN T LF + T A ++L IR G Y+ K+ ++I L + + +
Sbjct: 95 DVRVNSVTPVLFSLYPTAADYAAADPEELAEVIRPTGFYQAKTRSLIGLGTAIAEKHGGE 154
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+TLE L LPG+GRK ANV+L AFG+P I VDTH+ R+ R L + P KVE+ L
Sbjct: 155 VPRTLEELVALPGVGRKTANVVLGNAFGVPGITVDTHLGRLVRRWKLTDQEDPVKVEREL 214
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +I PK + + HGR VC +RKP C +C ++ C
Sbjct: 215 MELIEPKEWTMFSHRAIFHGRRVCHSRKPACGACFLAWQCPSF 257
>gi|262279873|ref|ZP_06057658.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
calcoaceticus RUH2202]
gi|262260224|gb|EEY78957.1| endonuclease III DNA glycosylase/apyrimidinic lyase [Acinetobacter
calcoaceticus RUH2202]
Length = 229
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 6 MTKKQIQIFFERLREQRPSPQTELKYSSSFELLIAVMLSAQATDVSVNKATDKLYPVANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 66 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + ++H+WL+
Sbjct: 126 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAVGKNVLEVEHRLIKVIPKEFILDSHHWLI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 186 LHGRYCCIARKPKCAECVVADVC 208
>gi|258592888|emb|CBE69197.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase) [NC10
bacterium 'Dutch sediment']
Length = 224
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
TP ++I + +P L + N F L++A +L+AQ TD VN+ TK LFE TP
Sbjct: 15 TPATAKKILTILEETYPDAHVTLDFENPFQLLIATILAAQCTDERVNQVTKGLFERYPTP 74
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L+ IR+ G YR K+ +II L+ EF ++PQT+E L L G+ RK
Sbjct: 75 KAFAEADPVELEEAIRSTGFYRNKARSIIGCCKKLVEEFGGQVPQTMEELITLSGVWRKT 134
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN++L A GI I VDTH+ R++NR+GLA P+++EQ L RIIP + + LV
Sbjct: 135 ANIVLGNALGITAGIAVDTHVIRVANRLGLAQSDKPDEIEQQLCRIIPKEKWIPLTHLLV 194
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR +C ARKP C C + +LC
Sbjct: 195 FHGRRICMARKPDCPRCPVRHLCPW 219
>gi|283850763|ref|ZP_06368050.1| endonuclease III [Desulfovibrio sp. FW1012B]
gi|283574006|gb|EFC21979.1| endonuclease III [Desulfovibrio sp. FW1012B]
Length = 210
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 116/208 (55%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T EI +P P+ L + N + L+VA +L+AQ TD VN T F
Sbjct: 1 MDTAARAREIVVRLRALYPDPEPALVHSNAYELLVATVLAAQCTDARVNTVTPEFFRRWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + ++++ + + G +R+K++N+++ + ++ +P ++ LT LPG+ R
Sbjct: 61 DPASLARADVAQVEDVVHSTGFFRQKAKNLVAAAKLMAERHGGGVPDSMATLTTLPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++LS A G I VDTH+ R++ R+GL P +E+ ++ ++ + ++
Sbjct: 121 KTANIVLSNALGKNEGIAVDTHVRRLAFRLGLTVSTNPIIIEKDMMLLLSQEDWGIVNHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
LVLHGR VCKARKP+C C++ ++C R+
Sbjct: 181 LVLHGRAVCKARKPRCDFCVLGDICPRL 208
>gi|186476851|ref|YP_001858321.1| endonuclease III [Burkholderia phymatum STM815]
gi|184193310|gb|ACC71275.1| endonuclease III [Burkholderia phymatum STM815]
Length = 214
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P PK EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPKTELEYTTPFELLIAVMLSAQATDVSVNKAMRRMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+ +GE+ + +YI+TIG+YR K++N+I+ IL++++ ++P E L LPG+GRK
Sbjct: 61 PQKVFDLGEEGVADYIKTIGLYRTKAKNVIATCRILLDQYAGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEVALEKFTPAEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|49473757|ref|YP_031799.1| endonuclease III [Bartonella quintana str. Toulouse]
gi|49239260|emb|CAF25581.1| Endonuclease III [Bartonella quintana str. Toulouse]
Length = 246
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 116/223 (52%), Positives = 164/223 (73%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ K + G LY E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+
Sbjct: 1 MTHKTVKLLKAREVAGILYREAEIAEIFRRFSVQRPTPKSDLIYTNIFTLLVAVVLSAQA 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD +VNK TK LF +AD P+KM+A+GE+++ +IRT+G++R K+ N+ +L LI+++
Sbjct: 61 TDASVNKVTKELFRLADQPEKMVALGEEEIARHIRTVGLWRAKARNVYALCSFLIDQYGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E L LPG+GRK ANV+L++AFG PT+ VDTHI R+ NR+GLAPGKTP VE+
Sbjct: 121 QVPDNREALMALPGVGRKTANVVLNVAFGQPTLAVDTHILRLGNRLGLAPGKTPEIVEEK 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
LL+IIP ++ AH+WLVLHGRY+C+ARK QC+ CII++LCK
Sbjct: 181 LLKIIPVRYLRYAHHWLVLHGRYICQARKVQCRQCIIADLCKA 223
>gi|296141598|ref|YP_003648841.1| endonuclease III [Tsukamurella paurometabola DSM 20162]
gi|296029732|gb|ADG80502.1| endonuclease III [Tsukamurella paurometabola DSM 20162]
Length = 256
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 110/214 (51%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
P L + + + +P EL + N L VA +LSAQ TDV VN+ T
Sbjct: 2 PQEPESHLALVRRARRMNRTLATAFPHVYCELDFTNPLELSVATILSAQCTDVRVNQVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF+ + +L+ YIR+ G YR K+ +I+ L L++ FD ++P+ ++ L
Sbjct: 62 ALFDRYRSAADYAGAERAELEEYIRSTGFYRNKATSIMGLGQALVDRFDGEVPRRMKDLV 121
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG GRK ANV+L AF +P I VDTH R+ +R P K+E ++ +IP K
Sbjct: 122 TLPGFGRKTANVVLGNAFDVPGITVDTHFSRLVHRWEWTQENDPVKIEHAVGELIPRKEW 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ HGR VC ARKP C C+++ C
Sbjct: 182 TLLSHRVIFHGRRVCHARKPACGVCVLAKDCPAY 215
>gi|325529045|gb|EGD06052.1| endonuclease III [Burkholderia sp. TJI49]
Length = 214
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG+YR K++N+++ IL++ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLYRTKAKNVVAACRILLDRYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|332826778|gb|EGJ99595.1| endonuclease III [Dysgonomonas gadei ATCC BAA-286]
Length = 211
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F K P + EL+Y N F L++AV+LSAQ TD VN T LFE
Sbjct: 1 MTKKERYTGVISWFEKKMPVAETELHYDNPFHLLIAVILSAQCTDKRVNMITPPLFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M + +YI+++ K++N++ ++ L+++F K+P ++E L +PG+GR
Sbjct: 61 TPEVMAVSSTDAIYHYIKSVSYPNNKAKNLLGMAKKLVDDFGGKVPDSMEELETIPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L +AF P + VDTH+FR+SNRIGL K P + E+ L++ IP K+ AH+W
Sbjct: 121 KTANVMLIVAFNKPAMPVDTHVFRVSNRIGLTDNSKNPEQTERELIKYIPTKYLSKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+C ARKP+C+ C ++ CK +
Sbjct: 181 LILHGRYICVARKPKCEECGLTPYCKFFSK 210
>gi|303248048|ref|ZP_07334314.1| endonuclease III [Desulfovibrio fructosovorans JJ]
gi|302490605|gb|EFL50510.1| endonuclease III [Desulfovibrio fructosovorans JJ]
Length = 210
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T EI +P L+YV+ + L+VA +L+AQ TD VN T F+
Sbjct: 1 MDTAARAREIIRRLRPLYPDLTPALHYVSAYQLLVATVLAAQCTDARVNLVTPAFFDRWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + ++ +R+ G +R+K++N+++ + ++ + +P T+E LT LPG+ R
Sbjct: 61 DPAALARADVATVEEVVRSTGFFRQKAKNLVAAAGRMVEHYGGAVPDTMEALTSLPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++LS A G I VDTH+ R+S R+GL P +E+ ++ + K + ++
Sbjct: 121 KTANIVLSNALGKHEGIAVDTHVRRLSFRLGLTSSDNPIIIEKDMMPLFDRKDWGDVNHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LVLHGR VCKARKP C +C++ +C +
Sbjct: 181 LVLHGRAVCKARKPLCDTCVLDAICPK 207
>gi|310767583|gb|ADP12533.1| Endonuclease III [Erwinia sp. Ejp617]
Length = 211
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKEKRHNILLRLRDNNPHPTTELNFTSPFELLISVLLSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ YI+TIG++ K+EN+I +L+ K+PQ+ E L LPG+GRK
Sbjct: 61 PAAILALGVDGVKEYIKTIGLFNSKAENVIKTCRMLLELHGGKVPQSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+ +P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVEEVEERLLKFVPKEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFKDK 208
>gi|226310653|ref|YP_002770547.1| endonuclease III [Brevibacillus brevis NBRC 100599]
gi|226093601|dbj|BAH42043.1| endonuclease III [Brevibacillus brevis NBRC 100599]
Length = 227
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 130/198 (65%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +I +P EL Y F L++A +LSAQ TD VN+ T +F+ + P+ L
Sbjct: 8 VADILDNLQQLYPDAHCELNYTTPFELLIATILSAQCTDKRVNEITAPMFQQLNQPEHYL 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +++++ +I+ +G+Y+ KS+NI+ IL ++++++PQT L LPG+GRK ANV+
Sbjct: 68 HLTQEEMEEHIKGLGLYKNKSKNILETCRILYEKYNSEVPQTHAELEALPGVGRKTANVV 127
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
LS AFGIP I VDTH+FR+ NR+GLA ++VE+ L++ IP + +AH+WL+ HGR
Sbjct: 128 LSNAFGIPAIAVDTHVFRVGNRLGLANSDNVDEVERQLMKRIPKEKWTDAHHWLIWHGRR 187
Query: 205 VCKARKPQCQSCIISNLC 222
VC +R PQC SC + ++C
Sbjct: 188 VCSSRNPQCGSCTLQSMC 205
>gi|220929306|ref|YP_002506215.1| endonuclease III [Clostridium cellulolyticum H10]
gi|219999634|gb|ACL76235.1| endonuclease III [Clostridium cellulolyticum H10]
Length = 210
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 111/209 (53%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ ++ + +P + L Y N L+++ L+AQ TD VN K L++
Sbjct: 1 MNKKEKALQMIEVLDKLYPDAECSLNYENPLQLLISTQLAAQCTDARVNIVAKDLYKKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +L+ I++ G YR K++NII I++ +++ IP ++ L LPG+GR
Sbjct: 61 TVEAFANADISELEEDIKSTGFYRNKAKNIIGCCKIIVEKYNGTIPDNMKELLELPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+ L G I VDTH R+SNR GL + P K+E L ++IP + + L
Sbjct: 121 KTANLYLYEIHGKQGIVVDTHAKRLSNRTGLTKHEDPEKIEYDLQKVIPESRWADFCHKL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V HGR VC ARKP C C I++LC +
Sbjct: 181 VFHGRAVCNARKPGCDKCEINHLCSYYTK 209
>gi|257452172|ref|ZP_05617471.1| endonuclease III [Fusobacterium sp. 3_1_5R]
gi|317058715|ref|ZP_07923200.1| endonuclease III [Fusobacterium sp. 3_1_5R]
gi|313684391|gb|EFS21226.1| endonuclease III [Fusobacterium sp. 3_1_5R]
Length = 213
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E+ K+ PK L + + F L+VAV+LSAQ TDV VN TK +F +
Sbjct: 1 MDKKQRVREVLKRLEEKFGKPKCALDFKSPFELLVAVILSAQCTDVRVNIVTKQMFPHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++ +IR+ G Y K++NI S L+ + ++PQ +E L L G+GR
Sbjct: 61 TPEQFANMEVEEIEEWIRSTGFYHNKAKNIKKCSQQLLELYHGEVPQDMEQLVNLAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN IG + P ++E+ L++I+P K + ++
Sbjct: 121 KTANVVRGEIWGLADGITVDTHVRRLSNLIGFVKEEDPIRIERELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+L GR C AR+P+C C IS CK K
Sbjct: 181 LILQGRDTCIARRPRCNQCEISEFCKGKK 209
>gi|184200103|ref|YP_001854310.1| putative endonuclease III [Kocuria rhizophila DC2201]
gi|183580333|dbj|BAG28804.1| putative endonuclease III [Kocuria rhizophila DC2201]
Length = 278
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 115/197 (58%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +P EL + + + L+VA +LSAQ+TD+ VN T LF P+++ +
Sbjct: 37 ILAQTYPYAVAELDFDDAWQLLVATVLSAQTTDIRVNAVTPGLFAAYPGPRELAEAPAED 96
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+Q +R++G YR K+ +I +L+ +++E+D +P TL L LPG+GRK ANV+L AFG
Sbjct: 97 VQEMVRSLGFYRSKARSIQALAARVVDEYDGTVPGTLAQLVTLPGVGRKTANVVLGNAFG 156
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+P I VDTH R++ R+G P KVE + + PP + L+ HGR +C +R+
Sbjct: 157 VPGITVDTHFGRLARRLGWTVQDDPVKVEADVAALFPPALWTELSHELIYHGRRICHSRR 216
Query: 211 PQCQSCIISNLCKRIKQ 227
P C C +++LC +
Sbjct: 217 PACGVCPVADLCPSYGE 233
>gi|254251792|ref|ZP_04945110.1| Endonuclease III protein [Burkholderia dolosa AUO158]
gi|124894401|gb|EAY68281.1| Endonuclease III protein [Burkholderia dolosa AUO158]
Length = 214
Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ S IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVAEYIKTIGLYRTKAKNVVATSRILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|299771077|ref|YP_003733103.1| endonuclease III [Acinetobacter sp. DR1]
gi|298701165|gb|ADI91730.1| endonuclease III [Acinetobacter sp. DR1]
Length = 224
Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 96/203 (47%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+++ F + PSP+ EL Y + F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MTKKQIQIFFERLREQRPSPQTELKYSSSFELLIAVMLSAQATDVSVNKATDKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+K+ +G L+ YI+TIG+Y K+EN+I IL+ +F+ ++P + L LPG+GRK
Sbjct: 61 AEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +VE L+++IP + ++H+WL+
Sbjct: 121 TANVVLNTAFGQPTMAVDTHIFRVGNRTGLAVGKNVLEVEHRLIKVIPKEFILDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C+++++C
Sbjct: 181 LHGRYCCIARKPKCAECVVADVC 203
>gi|217033530|ref|ZP_03438959.1| hypothetical protein HP9810_905g49 [Helicobacter pylori 98-10]
gi|216944055|gb|EEC23486.1| hypothetical protein HP9810_905g49 [Helicobacter pylori 98-10]
Length = 212
Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE +
Sbjct: 3 LKRAKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFEKYPS 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G+G+K
Sbjct: 63 VKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDGVGQK 122
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H+ L+
Sbjct: 123 TANVVLSVCFDANYIAVDTHVFRTTHRLGLSDTNTPIKTEEELSDLF-KDNLSKLHHALI 181
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
L GRY CKA+ P C +C + C
Sbjct: 182 LFGRYTCKAKNPLCGACFLKEFC 204
>gi|309775704|ref|ZP_07670702.1| endonuclease III [Erysipelotrichaceae bacterium 3_1_53]
gi|308916543|gb|EFP62285.1| endonuclease III [Erysipelotrichaceae bacterium 3_1_53]
Length = 215
Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EI + +P EL + N F L+VAV+LSAQ+TD VNK T LFE TPQ M
Sbjct: 4 DEILDILEEMFPDAHCELEHKNPFELLVAVVLSAQTTDAAVNKVTPALFEAFPTPQAMAE 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +++ IR IG+YR K+ +I +LS L++ FD +P++++ LT L G+GRK ANV+
Sbjct: 64 AQLQDIEDKIRRIGLYRNKAHSIQNLSRSLLDSFDGVVPESMKDLTSLAGVGRKTANVVR 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+ F IP+I VDTH+ RIS R+GLA + VEQ L R + + AH+ + GRY
Sbjct: 124 SVCFDIPSIAVDTHVERISKRLGLAKVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRY 183
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
C AR P+C+ C CK+ K
Sbjct: 184 FCTARNPKCEECPFREFCKKDK 205
>gi|291298596|ref|YP_003509874.1| endonuclease III [Stackebrandtia nassauensis DSM 44728]
gi|290567816|gb|ADD40781.1| endonuclease III [Stackebrandtia nassauensis DSM 44728]
Length = 245
Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 77/194 (39%), Positives = 108/194 (55%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ P EL Y + F L VA +LSAQ TDV VN T LF P M A +L
Sbjct: 21 LAELHPDAHCELDYADPFQLAVATILSAQCTDVRVNLTTPALFARYPDPAAMAAADRGEL 80
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G +R K+ +++ LS L+++ ++P T+ L +LPGIGRK ANVIL AFG+
Sbjct: 81 EELIRPTGFFRNKTNSLLGLSAALLSDHGGEVPGTMAELVKLPGIGRKTANVILGNAFGV 140
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH+ R+ +R G P K+E ++ +IP + ++ HGR VC ARKP
Sbjct: 141 PGITVDTHLARLVHRFGWTTATDPVKIEHAVGELIPKNDWTMFSHRIIFHGRRVCFARKP 200
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 201 ACGACGLAKLCPSY 214
>gi|171323118|ref|ZP_02911737.1| endonuclease III [Burkholderia ambifaria MEX-5]
gi|171091487|gb|EDT37131.1| endonuclease III [Burkholderia ambifaria MEX-5]
Length = 214
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG++R K++N+I+ +IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLFRTKAKNVIAACNILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALDKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|167562062|ref|ZP_02354978.1| endonuclease III [Burkholderia oklahomensis EO147]
gi|167569318|ref|ZP_02362192.1| endonuclease III [Burkholderia oklahomensis C6786]
Length = 214
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIFETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+K++A+GE+ + +YI+TIG+YR K++N+++ IL+ +D K+P E L LPG+GRK
Sbjct: 61 PKKIVALGEEGVADYIKTIGLYRTKAKNVVAACQILLERYDGKVPAEREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEY 205
>gi|115352417|ref|YP_774256.1| endonuclease III [Burkholderia ambifaria AMMD]
gi|115282405|gb|ABI87922.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia ambifaria
AMMD]
Length = 214
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG+YR K++N+++ +IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLYRTKAKNVVAACNILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|114777732|ref|ZP_01452692.1| endonuclease III [Mariprofundus ferrooxydans PV-1]
gi|114551948|gb|EAU54482.1| endonuclease III [Mariprofundus ferrooxydans PV-1]
Length = 213
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 99/203 (48%), Positives = 140/203 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E+ F P P EL Y N F L+ AV+LSAQSTDV VNKAT L+ +A+T
Sbjct: 1 MNAAEVRRFFEQLRAADPEPVTELNYNNEFELLAAVMLSAQSTDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+GE+ L+ YI T+G+Y K++++I + +L++ + K+P+T + L LPG+GRK
Sbjct: 61 PEAILALGEEALKGYISTLGLYNSKAKHLIGAARMLVDRHNGKVPRTRKELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++ F PT+ VDTHIFR+ NR GLAPGK P +VE+ LL+ IPP+ +AH+WL+
Sbjct: 121 TANVVLNVLFDEPTMAVDTHIFRVGNRTGLAPGKNPLEVEKGLLKAIPPEFMQHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C ARKP+C C ++ C
Sbjct: 181 LHGRYTCTARKPRCHLCPVAAEC 203
>gi|103488222|ref|YP_617783.1| endonuclease III [Sphingopyxis alaskensis RB2256]
gi|98978299|gb|ABF54450.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Sphingopyxis alaskensis RB2256]
Length = 222
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E + + PSP+ EL + N + L+VAV+LSAQ+TDV VNKAT+ LFE T
Sbjct: 1 MKRSDIFEFYRRLAELNPSPETELQFGNIYQLLVAVVLSAQATDVGVNKATRKLFETVKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+ML +GE+ L+ +IRTIG++ K++N+I+LS +LI + ++P + LT+LPG+GRK
Sbjct: 61 PQQMLDLGEEGLKQHIRTIGLFNAKAKNVIALSEMLIRDHGGEVPADRDALTKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG T VDTHIFR+ NR GLAPG T VE+ L + P + AH+WL+
Sbjct: 121 TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGNTVLAVEKKLEKGTPAPFRVGAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+CKAR P+C C +++LC+
Sbjct: 181 LHGRYICKARTPECWRCPVADLCRY 205
>gi|296133862|ref|YP_003641109.1| endonuclease III [Thermincola sp. JR]
gi|296032440|gb|ADG83208.1| endonuclease III [Thermincola potens JR]
Length = 208
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 123/207 (59%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I ++ L Y N F L+VA +LSAQ TD VNK T LF T
Sbjct: 1 MAADRVQMILQALEKEYGDAGTALNYRNPFELLVATVLSAQCTDERVNKVTPALFAKFGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM K+++ I++ G+Y K+ N+++ S L+ EF ++P TL+ L LPG+GRK
Sbjct: 61 PEKMSKAPVKEVEELIKSCGLYHNKARNLVAASKKLVAEFKGQVPDTLQELISLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AF I VDTH+FR++NR+GLA TP K E L+R IP AH+WL+
Sbjct: 121 TANVVLSNAFARDAIAVDTHVFRVANRLGLADSSTPLKTEADLMRAIPRDKWSRAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VCKAR PQC +C ++ CK +
Sbjct: 181 HHGRKVCKARNPQCVNCCLAVYCKSRQ 207
>gi|29654986|ref|NP_820678.1| endonuclease III [Coxiella burnetii RSA 493]
gi|153207567|ref|ZP_01946250.1| endonuclease III [Coxiella burnetii 'MSU Goat Q177']
gi|154706045|ref|YP_001423729.1| endonuclease III [Coxiella burnetii Dugway 5J108-111]
gi|161830587|ref|YP_001597521.1| endonuclease III [Coxiella burnetii RSA 331]
gi|165918359|ref|ZP_02218445.1| endonuclease III [Coxiella burnetii RSA 334]
gi|212211970|ref|YP_002302906.1| endonuclease III [Coxiella burnetii CbuG_Q212]
gi|212217979|ref|YP_002304766.1| endonuclease III [Coxiella burnetii CbuK_Q154]
gi|29542255|gb|AAO91192.1| endonuclease III [Coxiella burnetii RSA 493]
gi|120576535|gb|EAX33159.1| endonuclease III [Coxiella burnetii 'MSU Goat Q177']
gi|154355331|gb|ABS76793.1| endonuclease III [Coxiella burnetii Dugway 5J108-111]
gi|161762454|gb|ABX78096.1| endonuclease III [Coxiella burnetii RSA 331]
gi|165918009|gb|EDR36613.1| endonuclease III [Coxiella burnetii RSA 334]
gi|212010380|gb|ACJ17761.1| endonuclease III [Coxiella burnetii CbuG_Q212]
gi|212012241|gb|ACJ19621.1| endonuclease III [Coxiella burnetii CbuK_Q154]
Length = 218
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 107/205 (52%), Positives = 149/205 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E EEIF F + P EL Y + F L+++V+LSAQ+TD++VNKATK L+ IA+T
Sbjct: 1 MDQTEREEIFRRFKARNHKPVSELIYHSEFELLISVMLSAQATDISVNKATKDLYRIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+LA+GE L+ YI++IG+Y K++NII IL+ + +K+P+T E L LPG+GRK
Sbjct: 61 PAKVLALGESGLKKYIKSIGLYNTKAKNIIKTCKILVENYHSKVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG I VDTHIFR++NR GLA GKTP VE+ L+ ++P K+ +AH+WLV
Sbjct: 121 TANVILNTAFGEHAIAVDTHIFRVANRTGLARGKTPLAVEKKLMEVVPKKYLADAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+C AR+P+C C+I++LC+
Sbjct: 181 LHGRYICIARRPKCSECLINDLCEY 205
>gi|224371678|ref|YP_002605842.1| Putative endonuclease III [Desulfobacterium autotrophicum HRM2]
gi|223694395|gb|ACN17678.1| Putative endonuclease III [Desulfobacterium autotrophicum HRM2]
Length = 212
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 117/200 (58%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ I + ++P+ K +L + F L+VA +LSAQ TDV VN+ T LF+ TP K+
Sbjct: 8 INTILRILKRQYPTVKTQLAHKTPFQLLVATILSAQCTDVQVNRVTPVLFDRFPTPDKLA 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + + G Y K++NI + + ++ +P ++ LT LPG+GRK AN++
Sbjct: 68 GASLDEIKPIVFSTGFYNNKAKNIKACAQSIMTVHGGIVPTSMTALTGLPGVGRKTANLV 127
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+AFG+ TI VDTH++R+S R+GL+ G P KVE L+ IIP K + ++ GR
Sbjct: 128 RSVAFGMDTIVVDTHVYRVSRRLGLSKGLNPAKVESDLMAIIPQKSWNDLCLQMIYLGRE 187
Query: 205 VCKARKPQCQSCIISNLCKR 224
C ARKP C+ C + +C
Sbjct: 188 FCDARKPLCRKCPLQEICPS 207
>gi|170702345|ref|ZP_02893239.1| endonuclease III [Burkholderia ambifaria IOP40-10]
gi|170132758|gb|EDT01192.1| endonuclease III [Burkholderia ambifaria IOP40-10]
Length = 214
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG+YR K++N+I+ +IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLYRTKAKNVIAACNILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|259908521|ref|YP_002648877.1| Endonuclease III [Erwinia pyrifoliae Ep1/96]
gi|224964143|emb|CAX55650.1| Endonuclease III [Erwinia pyrifoliae Ep1/96]
gi|283478481|emb|CAY74397.1| endonuclease III [Erwinia pyrifoliae DSM 12163]
Length = 211
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 137/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ A+T
Sbjct: 1 MNKEKRHNILLRLRDNNPHPTTELNFTSPFELLISVLLSAQATDVSVNKATARLYPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ YI+TIG++ K+EN+I +L+ K+PQ+ E L LPG+GRK
Sbjct: 61 PAAILALGVDGVKEYIKTIGLFNSKAENVIKTCRMLLELHGGKVPQSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+ +P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVEEVEERLLKFVPKEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ +
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFKDK 208
>gi|148261483|ref|YP_001235610.1| endonuclease III [Acidiphilium cryptum JF-5]
gi|326404967|ref|YP_004285049.1| DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase
[Acidiphilium multivorum AIU301]
gi|146403164|gb|ABQ31691.1| endonuclease III [Acidiphilium cryptum JF-5]
gi|325051829|dbj|BAJ82167.1| DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase
[Acidiphilium multivorum AIU301]
Length = 240
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 2/222 (0%)
Query: 3 SSKKSDSYQGNSPLGCL--YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
+++ + P + ++ S P P+ EL+Y + F+L+VAV+LSAQ
Sbjct: 4 ATEPPPKRRPTVPQARVRRMKTADIRPFLEAISAGNPEPRTELHYADPFSLLVAVVLSAQ 63
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD VNKAT LF A TP M A+G + + +IR+IG+++ K+ N+ +L+ +L+
Sbjct: 64 TTDAAVNKATPGLFAAAPTPAAMAALGAEGIGPHIRSIGLWQSKARNVAALAELLVERHG 123
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+P E L LPG+GRK ANV+L+ FG PT+ VDTHIFR++NR GLAPGKT +VE
Sbjct: 124 GAVPAEREALEALPGVGRKTANVVLNEIFGQPTMAVDTHIFRLANRTGLAPGKTVREVED 183
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+R IPP AH+WL+LHGRYVCKAR+P+C C + C
Sbjct: 184 GLVRRIPPDLLRRAHHWLILHGRYVCKARQPECWRCPGAQWC 225
>gi|188585131|ref|YP_001916676.1| DNA-(apurinic or apyrimidinic site) lyase, endonuclease III
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349818|gb|ACB84088.1| DNA-(apurinic or apyrimidinic site) lyase, endonuclease III
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 218
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 129/206 (62%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
KE E+I +PS + L + + F L++A +LSAQ TD+ VN+ TK LFE+A+T
Sbjct: 1 MEKKEAEQILSKLKANYPSARTALKFNSPFELLIATILSAQCTDIRVNEITKELFELANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L I+ G+Y+ KS+NI+ IL++E++ ++P E L +LPG+GRK
Sbjct: 61 PQDILKLGRPRLIQIIKGAGLYKNKSKNILETCEILVDEYEGEVPAKREELEKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF IP VDTH+ R+S R+GL + P VEQ L+ + H+ L+
Sbjct: 121 TANVVLANAFNIPAFAVDTHVLRVSKRLGLTDKEDPRGVEQDLMSVFDRDDWNVGHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR VCKARKPQC++C I CK
Sbjct: 181 YHGRAVCKARKPQCENCSIIEHCKYY 206
>gi|290475314|ref|YP_003468202.1| endonuclease III [Xenorhabdus bovienii SS-2004]
gi|289174635|emb|CBJ81429.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus
bovienii SS-2004]
Length = 210
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQQKRIAILTRLQNNNPQPTTELAFNSPFELLISVLLSAQATDVSVNKATTKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG+Y K+EN+I IL+ + ++P+ L LPG+GRK
Sbjct: 61 PQTILNLGVDNLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK ++VE++LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVDEVERTLLKVVPDEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYADK 208
>gi|91788609|ref|YP_549561.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Polaromonas sp. JS666]
gi|91697834|gb|ABE44663.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Polaromonas sp. JS666]
Length = 212
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 103/205 (50%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +E F P P EL Y + F L+ AVLLSAQ+TDV VNKAT+ LF +A T
Sbjct: 1 MKKEHIEPFFATLRAANPQPVTELKYTSVFELLAAVLLSAQATDVGVNKATRKLFAVAPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+NYI+TIG+YR K++N+++ IL+ + ++P+T E L LPG+GRK
Sbjct: 61 PQAILDLGLEGLENYIKTIGLYRTKAKNLLATCRILVEQHGGQVPRTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG T+ VDTHIFR+SNR GLAPGK P +VE+ LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNSAFGEATMAVDTHIFRVSNRTGLAPGKNPLEVEKGLLKRVPEAYLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC ARKP C C + C
Sbjct: 181 LHGRYVCTARKPLCWQCAVETFCDF 205
>gi|329910060|ref|ZP_08275219.1| Endonuclease III [Oxalobacteraceae bacterium IMCC9480]
gi|327546285|gb|EGF31314.1| Endonuclease III [Oxalobacteraceae bacterium IMCC9480]
Length = 216
Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ IF + P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +A T
Sbjct: 1 MNAEKRRLIFERWQAANPNPATELAYSTPFELLIAVLLSAQATDVAVNKATRKLFPMAST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + A+G L YI+TIG++R K++N I +++ E +IP+ GL LPG+GRK
Sbjct: 61 PAAIYALGVDGLIPYIQTIGLFRNKAKNTIETCRLILTEHGGQIPRDRAGLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR GLAPGK + VE L++ +P + +AH+W++
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVGNRTGLAPGKDVDVVEHKLMKFVPREFLQDAHHWMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR PQC +C+I++LC +
Sbjct: 181 LHGRYTCMARSPQCWNCMIADLCDYRDK 208
>gi|294636377|ref|ZP_06714765.1| endonuclease III [Edwardsiella tarda ATCC 23685]
gi|291090352|gb|EFE22913.1| endonuclease III [Edwardsiella tarda ATCC 23685]
Length = 213
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL Y + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILRRLQAANPQPTTELRYASPFELLIAVLLSAQATDVSVNKATATLFPLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + ++ +I+TIG+Y K+ENI+ +L++ ++P+ + L LPG+GRK
Sbjct: 61 PQALLDLGVEGIKQHIKTIGLYNSKAENIVKTCRLLLDLHGGEVPEDRQALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APG T N VE+ LL+++P + N H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGDTVNAVEEKLLKVVPAEFALNCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR+P+C SC+I +LC+ +
Sbjct: 181 LHGRYTCIARRPRCGSCLIEDLCEYRDK 208
>gi|187923232|ref|YP_001894874.1| endonuclease III [Burkholderia phytofirmans PsJN]
gi|187714426|gb|ACD15650.1| endonuclease III [Burkholderia phytofirmans PsJN]
Length = 214
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLQSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+ +GE+ + YI+TIG+YR K++N+I+ IL++++ +P+ E L LPG+GRK
Sbjct: 61 PQKVFDLGEEGVTGYIKTIGLYRTKAKNVIATCRILLDQYGGDVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + + +AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEVALEKFTPAEFKQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|172061289|ref|YP_001808941.1| endonuclease III [Burkholderia ambifaria MC40-6]
gi|171993806|gb|ACB64725.1| endonuclease III [Burkholderia ambifaria MC40-6]
Length = 214
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG+YR K++N+++ IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLYRTKAKNVVAACKILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|153006575|ref|YP_001380900.1| endonuclease III [Anaeromyxobacter sp. Fw109-5]
gi|152030148|gb|ABS27916.1| endonuclease III [Anaeromyxobacter sp. Fw109-5]
Length = 226
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 109/204 (53%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
EI S P + L + + L+V+V+LSAQSTD VN+AT LF T
Sbjct: 14 KRARAAEIVDRLSRAMPDVRIALEFEDDLELLVSVILSAQSTDAGVNRATPALFARYRTA 73
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
A + L +IR++G+YR K++ I++ + E ++P+T E L LPG+GRK
Sbjct: 74 ADYGAAAPEDLWPFIRSLGLYRNKAKAIVAAMRAIATEHGGRVPRTREALEALPGVGRKT 133
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L VDTH+ R+S R+GL + P+KVEQ L+ ++P + AH V
Sbjct: 134 AGVVLVHLGAAHAFPVDTHVGRVSRRLGLTRHEDPSKVEQDLMALLPEERWGEAHQLFVW 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR C AR+P C C + LC +
Sbjct: 194 HGRRTCDARRPACSRCPVEELCPK 217
>gi|194333300|ref|YP_002015160.1| endonuclease III [Prosthecochloris aestuarii DSM 271]
gi|194311118|gb|ACF45513.1| endonuclease III [Prosthecochloris aestuarii DSM 271]
Length = 211
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 124/206 (60%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I K+PSPK EL Y + + L++A +L+AQSTD VN T+ LF++
Sbjct: 1 MNVAEKIAFINEALGNKYPSPKSELQYQSPYQLLIATMLAAQSTDKKVNMITETLFKVCP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M +++++ +R+I K++NI++ S +L+ F ++P + E L LPG+GR
Sbjct: 61 DAESMSRTDPEEIRSMVRSINYNNTKAKNILAASCLLMENFGGQVPDSREELETLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+LS AFG P + VDTH+ R+SNRIGL P E L+ IIP + H++L
Sbjct: 121 KTANVVLSNAFGKPVMPVDTHVHRVSNRIGLVATDNPRDTEDGLIAIIPENRVIDFHHYL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+LHGRY CKARKP C C + C
Sbjct: 181 LLHGRYTCKARKPLCSECPLVPACDY 206
>gi|300716522|ref|YP_003741325.1| Endonuclease III [Erwinia billingiae Eb661]
gi|299062358|emb|CAX59475.1| Endonuclease III [Erwinia billingiae Eb661]
Length = 211
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++I P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKDKRQQILSRLRDNDPHPTTELVFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ MLA+G + ++ YI+TIG++ K+EN+I IL + +P+ L LPG+GRK
Sbjct: 61 PEAMLALGVEGVKAYIKTIGLFNTKAENVIKTCRILHEQHQGVVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK VE LL+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVELVEDKLLKVVPNEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFGEK 208
>gi|78043065|ref|YP_359967.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
gi|77995180|gb|ABB14079.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
Length = 210
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 124/205 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T K+ +I +P K EL + N F L+VAV+LSAQSTD VNK T+ LF
Sbjct: 1 MTGKKAHKIAAELEKLFPVAKTELNFQNIFQLLVAVVLSAQSTDRQVNKVTEKLFLFVKE 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +GE++L IR++G+YR K+ N+I ++ IL E+ ++P + L +LPG+G K
Sbjct: 61 PRDLLDMGEEELSRQIRSLGLYRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A VI+ + F P+ VDTH+FR++ R+GL+ +TP V L +I PP + H+ L+
Sbjct: 121 TAEVIVGVGFNKPSFPVDTHVFRVARRLGLSKARTPEGVSFDLKKIFPPNSWIDLHHRLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
GR +CKA+KP C C C++
Sbjct: 181 FFGRRICKAQKPSCNICPFPEFCQK 205
>gi|296393534|ref|YP_003658418.1| endonuclease III [Segniliparus rotundus DSM 44985]
gi|296180681|gb|ADG97587.1| endonuclease III [Segniliparus rotundus DSM 44985]
Length = 245
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ + + Q +PLG + + + +P EL + N L+VA +LSAQ+
Sbjct: 1 MPAASAFKNQPKAPLGLVR---RARRMSRTLAELFPDAHCELRFTNPLELLVATVLSAQT 57
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN T LF T Q + ++ IRTIG++R K+ N+I + L F
Sbjct: 58 TDVRVNMVTPALFARYRTAQDYAQANQADVEELIRTIGLFRAKAANLIGIGSALCERFGA 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+TL+ L LPG+GRK ANV+L AFG+P + VDTH R+ R P K+E +
Sbjct: 118 QVPRTLQELVTLPGVGRKTANVVLGNAFGVPGLTVDTHFARLVGRWRWTEETDPVKIEFA 177
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +I K + + ++ GR VC A++P C +C ++ C
Sbjct: 178 VAALIERKEWTDLSHRIIWFGRSVCHAQRPACGACSLAADCPSF 221
>gi|292488192|ref|YP_003531074.1| endonuclease III [Erwinia amylovora CFBP1430]
gi|292899398|ref|YP_003538767.1| endonuclease III [Erwinia amylovora ATCC 49946]
gi|291199246|emb|CBJ46363.1| endonuclease III [Erwinia amylovora ATCC 49946]
gi|291553621|emb|CBA20666.1| endonuclease III [Erwinia amylovora CFBP1430]
gi|312172329|emb|CBX80586.1| endonuclease III [Erwinia amylovora ATCC BAA-2158]
Length = 211
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNREKRYNILQRLRDNNPHPTTELNFNSPFELLIAVLLSAQATDVSVNKATARLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ YI+TIG++ K+EN+I IL+ + D ++PQ+ E L LPG+GRK
Sbjct: 61 PAAILALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHDGEVPQSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+ +P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVEEVEERLLKFVPGEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCLIEDLCEFKEK 208
>gi|294781929|ref|ZP_06747261.1| endonuclease III [Fusobacterium sp. 1_1_41FAA]
gi|294481740|gb|EFG29509.1| endonuclease III [Fusobacterium sp. 1_1_41FAA]
Length = 216
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILEELHKKFGEPKCALNFETPFELLVAVILSAQCTDKRVNIVTEEMFKEVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IPQ ++ LT L G+GR
Sbjct: 61 TPEQFANMEIEEIENYIKSTGFFRNKAKNIKKCSQQLLEKYNGEIPQDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ RI+N IGL + P K+EQ L++I+P K ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRITNLIGLVKSEDPIKIEQELMKIVPKKSWIVFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGR C AR+PQC++C IS C K
Sbjct: 181 LILHGRATCIARRPQCKNCEISEYCNYGK 209
>gi|78187535|ref|YP_375578.1| endonuclease III/Nth [Chlorobium luteolum DSM 273]
gi|78167437|gb|ABB24535.1| DNA-(apurinic or apyrimidinic site) lyase [Chlorobium luteolum DSM
273]
Length = 212
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 132/206 (64%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++E + + ++P PK EL + + F L++A +L+AQSTD VN T LF+ A +
Sbjct: 6 KQKIEFLREVLGARYPDPKSELVFHSPFQLLIATILAAQSTDRQVNIITGELFKAAPDAE 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M + + + Y+RTI + K++NI++ S IL E++ K+P+T E L RLPG+GRK A
Sbjct: 66 SMAVLDLEAVTGYVRTINYFNTKAKNILAASRILAEEYNGKVPETREALERLPGVGRKTA 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+L+ AF P + VDTH+ R+SNRIGL + + E +L++IIP + + H++L+LH
Sbjct: 126 NVVLAGAFRQPVMPVDTHVHRVSNRIGLCRTRNVEETEAALMKIIPEEWVVDFHHYLLLH 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY CKA+KP C C + +C ++
Sbjct: 186 GRYTCKAKKPACADCPVREICAYPEK 211
>gi|223986376|ref|ZP_03636383.1| hypothetical protein HOLDEFILI_03694 [Holdemania filiformis DSM
12042]
gi|223961667|gb|EEF66172.1| hypothetical protein HOLDEFILI_03694 [Holdemania filiformis DSM
12042]
Length = 226
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 1/204 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+++EI + +P EL + N F L VAV+LSAQ+TDV+VNK T LFE TP+ +
Sbjct: 2 KVDEILAALTAMFPDAHCELNHRNPFELAVAVVLSAQTTDVSVNKVTPRLFEKYPTPEAL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +++ IR IG+Y K+++I L+ ++ +F +PQT+E LT LPG+GRK ANV
Sbjct: 62 AEAPLEDIEDCIRRIGLYHNKAKSIQGLARGVVEQFGGVMPQTMEELTSLPGVGRKSANV 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
I+S+ FG+P I VDTH+ R+S R+GLA K +VE+ L+R +P +AH+ + G
Sbjct: 122 IMSVCFGMPAIAVDTHVERVSKRLGLAAPKDTVLEVEKKLMRKLPKAEWSHAHHLFIFFG 181
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
RY CKA+ PQC C ++ C+ K
Sbjct: 182 RYFCKAKNPQCPDCPFTSFCREYK 205
>gi|329848332|ref|ZP_08263360.1| endonuclease III [Asticcacaulis biprosthecum C19]
gi|328843395|gb|EGF92964.1| endonuclease III [Asticcacaulis biprosthecum C19]
Length = 233
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 147/214 (68%), Gaps = 2/214 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
SP+ P + +F F P P+ EL +VN +TL+VAV+LSAQ+TD VNKAT +
Sbjct: 18 SPVMAAPDPALISALFERFEEDKPDPRTELDFVNPYTLLVAVVLSAQTTDKAVNKATAPV 77
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F+IAD P M A+GE L + ++ ++R KS N+I LS ILI+++ +IP T + L L
Sbjct: 78 FQIADNPAAMAALGEDGLTPMLASLNLFRTKSRNVIRLSQILIDQYGGQIPLTRDELVAL 137
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQ 191
PG+G K A+V+L+ P I VDTH+FR+S+R+GL A KTP+KVEQ L+++IP K
Sbjct: 138 PGVGNKTASVVLNELDIQPAIAVDTHVFRVSHRLGLVDATAKTPDKVEQQLMQVIPRKWL 197
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
AH+WL+LHGRYVC ARKP+C+ CI+S+LC RI
Sbjct: 198 TRAHHWLILHGRYVCIARKPKCEVCIVSHLCPRI 231
>gi|68171272|ref|ZP_00544674.1| Endonuclease III/Nth [Ehrlichia chaffeensis str. Sapulpa]
gi|88658370|ref|YP_507652.1| endonuclease III [Ehrlichia chaffeensis str. Arkansas]
gi|67999319|gb|EAM85966.1| Endonuclease III/Nth [Ehrlichia chaffeensis str. Sapulpa]
gi|88599827|gb|ABD45296.1| endonuclease III [Ehrlichia chaffeensis str. Arkansas]
Length = 210
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +F F P P+ EL Y N FTL++A++LSA++TDV+VNK T LFE+ADT
Sbjct: 1 MNRRNINLLFTKFKEHNPHPRIELKYTNSFTLLIAIVLSARTTDVSVNKITDKLFEVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML +GEK L+NYI TIG+Y KS+NII+LS I+IN+ ++ +P L LPG+GRK
Sbjct: 61 PRKMLDLGEKGLKNYINTIGLYNSKSKNIIALSGIIINQHNSNVPLDFNTLVALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ +PT+ VDTH+FR+SNRIGL K E +LL +IP K AH+WLV
Sbjct: 121 SANVFLNTWLNLPTVAVDTHVFRVSNRIGLVKESNVLKTEDALLNVIPKKWLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCK+RKP C C++ +LC+ +
Sbjct: 181 LHGRYVCKSRKPLCSQCVVQDLCEYESK 208
>gi|107023265|ref|YP_621592.1| endonuclease III [Burkholderia cenocepacia AU 1054]
gi|116690348|ref|YP_835971.1| endonuclease III [Burkholderia cenocepacia HI2424]
gi|254247588|ref|ZP_04940909.1| Endonuclease III/Nth [Burkholderia cenocepacia PC184]
gi|105893454|gb|ABF76619.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia cenocepacia
AU 1054]
gi|116648437|gb|ABK09078.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia cenocepacia
HI2424]
gi|124872364|gb|EAY64080.1| Endonuclease III/Nth [Burkholderia cenocepacia PC184]
Length = 214
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVTEYIKTIGLYRTKAKNVVATCRILLERYDGEVPADREALEGLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|257466036|ref|ZP_05630347.1| endonuclease III [Fusobacterium gonidiaformans ATCC 25563]
gi|315917193|ref|ZP_07913433.1| endonuclease III [Fusobacterium gonidiaformans ATCC 25563]
gi|313691068|gb|EFS27903.1| endonuclease III [Fusobacterium gonidiaformans ATCC 25563]
Length = 213
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E+ K+ PK L + + F L+VAV+LSAQ TDV VN TK +F +
Sbjct: 1 MDKKQRVREVLKRLEEKFGKPKCALDFKSPFELLVAVILSAQCTDVRVNIVTKQMFPHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++ +IR+ G Y K++NI S L+ + ++PQ +E L L G+GR
Sbjct: 61 TPEQFAKMEVEEIEEWIRSTGFYHNKAKNIKKCSQQLLELYHGEVPQDMEQLVNLAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R+SN IG + P ++E+ L++I+P K + ++
Sbjct: 121 KTANVVRGEIWGLADGITVDTHVRRLSNLIGFVKEEDPIRIERELMKIVPKKSWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+L GR C AR+P+C C IS CK K
Sbjct: 181 LILQGRDTCIARRPRCNQCEISEFCKGKK 209
>gi|206560784|ref|YP_002231549.1| endonuclease III [Burkholderia cenocepacia J2315]
gi|198036826|emb|CAR52726.1| endonuclease III [Burkholderia cenocepacia J2315]
Length = 214
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 97/205 (47%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ IL+ +D ++P L LPG+GRK
Sbjct: 61 PRQIVALGEEGVTEYIKTIGLYRTKAKNVVATCRILLERYDGEVPADRAALEGLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|238028216|ref|YP_002912447.1| endonuclease III [Burkholderia glumae BGR1]
gi|237877410|gb|ACR29743.1| Endonuclease III [Burkholderia glumae BGR1]
Length = 214
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
PK+ + I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNPKKRQAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRRMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++LA+GE+ + YI+TIG+YR K++N+I+ IL++++ ++P E L LPG+GRK
Sbjct: 61 PAQVLALGEEGVTEYIKTIGLYRTKAKNVIATCRILLDQYGGEVPADREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + + NAH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFRQNAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|217032360|ref|ZP_03437855.1| hypothetical protein HPB128_25g8 [Helicobacter pylori B128]
gi|298736277|ref|YP_003728803.1| endonuclease III NTH [Helicobacter pylori B8]
gi|216945927|gb|EEC24543.1| hypothetical protein HPB128_25g8 [Helicobacter pylori B128]
gi|298355467|emb|CBI66339.1| endonuclease III NTH [Helicobacter pylori B8]
Length = 216
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 3 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPSVNDLALASLEEVKEIIQSVSYFNNKSKHLISMAQKVVKDFKGVIPSTQKELMSLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANCIAVDTHVFRATHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 182 HALILFGRYTCKAKNPLCGACFLKEFC 208
>gi|270308206|ref|YP_003330264.1| endonuclease III protein [Dehalococcoides sp. VS]
gi|270154098|gb|ACZ61936.1| endonuclease III protein [Dehalococcoides sp. VS]
Length = 225
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+ EI S+ +P K L + F ++VA +LSAQSTD +NK T LF+ +
Sbjct: 14 EKQASEIIKRLSIIYPDAKTALNFTTPFEMLVATILSAQSTDKMINKITPALFKKYPDAK 73
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
KL+ I++ G + K+ NI+ + +++ F +P + + LPG+GRK A
Sbjct: 74 AFAEASLDKLEQDIKSSGFFHNKALNIMGAARGVVSRFGGVVPSNMADMLTLPGVGRKTA 133
Query: 142 NVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L AFG + I VDTH+ R+S R+GL P K+EQ L+ IP N Y+L+
Sbjct: 134 NVVLHNAFGLVEGIAVDTHVKRLSERLGLTNNTDPVKIEQDLMEFIPRNEWGNFSYYLID 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC A+KP+C+ C++ ++C
Sbjct: 194 HGRAVCDAKKPRCEECVLKDICPS 217
>gi|317012400|gb|ADU83008.1| endonuclease III [Helicobacter pylori Lithuania75]
Length = 216
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 119/209 (56%), Gaps = 1/209 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T L
Sbjct: 1 MSLKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
FE + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L
Sbjct: 61 FEKYPSVNDLALASLEEVKEIIQSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G+K ANV+LS+ F + VDTH+FR ++R+GL+ K P K E+ L + +
Sbjct: 121 EGVGQKTANVVLSVCFDANYMAVDTHVFRTTHRLGLSNAKDPIKTEEELSDLF-KDNLSK 179
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H+ L+L GRY CKA+ P C +C + C
Sbjct: 180 LHHALILFGRYTCKAKNPLCGACFLKEFC 208
>gi|167758647|ref|ZP_02430774.1| hypothetical protein CLOSCI_00987 [Clostridium scindens ATCC 35704]
gi|167663843|gb|EDS07973.1| hypothetical protein CLOSCI_00987 [Clostridium scindens ATCC 35704]
Length = 208
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K +I + ++ + L Y + L++A +LSAQ TD VN T+ LF+ +
Sbjct: 2 KKRTRQILDILDEQYGTEYRCYLNYETPWQLLIATMLSAQCTDARVNIVTESLFKKYPSA 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ K+L+ I+ G Y K++NIIS +++++D ++P++LE LT L G+GRK
Sbjct: 62 SAFASADLKELEQDIKPTGFYHNKAKNIISCMKDIVDKYDGEVPKSLEELTSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + P++ VDTH+ RISNR+GL + P K+EQ L++ +P H + ++
Sbjct: 122 ANVIRGNIYHEPSVVVDTHVKRISNRLGLTKNQDPEKIEQDLMKELPKDHWILYNIQIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C AR P+C+ C + CK K
Sbjct: 182 FGRTICTARSPRCEECFLQKYCKEYK 207
>gi|317181900|dbj|BAJ59684.1| endonuclease III [Helicobacter pylori F57]
Length = 216
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L C T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 3 LKCAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPSVKDLALTSLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPVKTEEELSDLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 182 HALILFGRYTCKAKNPLCGACFLKEFC 208
>gi|226225941|ref|YP_002760047.1| putative DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27]
gi|226089132|dbj|BAH37577.1| putative DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27]
Length = 246
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI----FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ S + T + + I +P EL + N F L+ A +LSAQ
Sbjct: 18 QKPSQRAAPVARSPKTKADKQAIATVVLERLQATYPDAHCELDHRNAFELLSATILSAQC 77
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN T LF P+ + ++++ +RT G +R K+++++ ++ L+ +
Sbjct: 78 TDVRVNMVTPALFARFPNPETLANAPLEEVEEIVRTTGFFRAKAKSLVGMAKALVRDHAG 137
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+P+++ L LPG+GRK ANVIL AFGI I VDTH+ R++ R+GL P +E+
Sbjct: 138 DVPRSIAELVPLPGVGRKTANVILGNAFGINEGIVVDTHVQRLARRLGLTREPDPVGIER 197
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ + P + L+ HGR C ARKP C C+++++C
Sbjct: 198 ELMPLFPRDAWAQLSHLLIWHGRRTCFARKPACDRCVLADVCPS 241
>gi|319407947|emb|CBI81601.1| endonuclease III [Bartonella schoenbuchensis R1]
Length = 269
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 117/209 (55%), Positives = 162/209 (77%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+G LY E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+TDV VNK T+ LF
Sbjct: 5 VGTLYRKDEIAEIFRRFSIQRPTPKSDLVYTNAFTLLVAVILSAQATDVGVNKVTQELFP 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+AD P+KM+A+GE+ + +YIRTIG++R K+ NI +L +LI+++D ++P + E L LPG
Sbjct: 65 LADRPEKMVALGEEGIASYIRTIGLWRAKARNIYALCCLLIDQYDGQVPDSREALMALPG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L++AFG PT+ VDTHI R+ NR+GLAPGKTP VE+ L++IIP + + AH
Sbjct: 125 VGRKTANVVLNVAFGQPTLAVDTHILRLGNRLGLAPGKTPEVVEEKLVKIIPACYMHYAH 184
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRY+CKARK C CII++LCK
Sbjct: 185 HWLILHGRYICKARKALCTQCIIADLCKA 213
>gi|307293105|ref|ZP_07572951.1| endonuclease III [Sphingobium chlorophenolicum L-1]
gi|306881171|gb|EFN12387.1| endonuclease III [Sphingobium chlorophenolicum L-1]
Length = 236
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLY-TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
M + G L ++ + F + P+P+ EL Y N + L+VAV+LSA
Sbjct: 1 MADRPAHRPIRHEGRSGPLIVNKGQIFDFFSRLAEANPAPRTELEYDNDYQLLVAVVLSA 60
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+TDV VNKAT+ LF TPQ+M+ +GE++L+ +I+TIG++ K++N+I+LS IL+ +F
Sbjct: 61 QATDVGVNKATRALFREVLTPQQMVDLGEERLKTHIKTIGLFNAKAKNVIALSEILVRDF 120
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++PQ + LT LPG+GRK ANV+++ AFG T VDTHIFR+ NR GLAPGKTP VE
Sbjct: 121 GGEVPQDRDILTTLPGVGRKTANVVMNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVE 180
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L + +P + +AH+WL+LHGRYVCKARKP+C CI+++LC+
Sbjct: 181 LKLEKGVPGPFRRDAHHWLILHGRYVCKARKPECWRCIVADLCRF 225
>gi|207091788|ref|ZP_03239575.1| endonuclease III (nth) [Helicobacter pylori HPKX_438_AG0C1]
Length = 206
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE + +
Sbjct: 1 KAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFEKYPSVSDL 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++++ I+++ + KS+++IS++ ++ +F IP T L L G+G+K ANV
Sbjct: 61 ALASLEEVKEIIQSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQNELMSLDGVGQKTANV 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H+ L+L GR
Sbjct: 121 VLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLHHALILFGR 179
Query: 204 YVCKARKPQCQSCIISNLC 222
Y CKA+ P C +C + C
Sbjct: 180 YTCKAKNPLCGACFLKEFC 198
>gi|257457298|ref|ZP_05622469.1| endonuclease III [Treponema vincentii ATCC 35580]
gi|257445220|gb|EEV20292.1| endonuclease III [Treponema vincentii ATCC 35580]
Length = 217
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 147/208 (70%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
P L + ++ + P+P+ EL++ N +TL+VAV+LSAQ+TDV VNKAT LF
Sbjct: 3 PTIRLLPADAVYTVYERLRQENPNPRSELHWKNVYTLLVAVVLSAQATDVGVNKATTPLF 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E DTP++M+++GE+ L++YI +I +Y K++ II+LS ILI+++ +++P L LP
Sbjct: 63 EKVDTPEQMVSLGEEGLKSYINSINLYPTKAKRIIALSKILIDQYHSEVPHDRTALESLP 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L++ FG P I VDTHI R + RIGL+ G TP +VEQ LLR+ P + +A
Sbjct: 123 GVGRKTANVVLNVGFGEPAIAVDTHILRTAPRIGLSKGTTPLEVEQDLLRVTPEEFLLDA 182
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
H+W++LHGRYVCKAR P C C ++++C
Sbjct: 183 HHWILLHGRYVCKARNPDCAGCSLNDIC 210
>gi|150007785|ref|YP_001302528.1| endonuclease III [Parabacteroides distasonis ATCC 8503]
gi|256840051|ref|ZP_05545560.1| endonuclease III [Parabacteroides sp. D13]
gi|298376845|ref|ZP_06986800.1| endonuclease III [Bacteroides sp. 3_1_19]
gi|301310179|ref|ZP_07216118.1| endonuclease III [Bacteroides sp. 20_3]
gi|149936209|gb|ABR42906.1| endonuclease III [Parabacteroides distasonis ATCC 8503]
gi|256738981|gb|EEU52306.1| endonuclease III [Parabacteroides sp. D13]
gi|298266723|gb|EFI08381.1| endonuclease III [Bacteroides sp. 3_1_19]
gi|300831753|gb|EFK62384.1| endonuclease III [Bacteroides sp. 20_3]
Length = 221
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 1/216 (0%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ + + + + F P + EL+Y + + L++AV+LSAQ TD VN T
Sbjct: 2 RKTETEKAMRKEERYKGVLNWFKENVPVAETELHYDDPYQLLIAVILSAQCTDKRVNMIT 61
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
LFE TP+ M A + + YIR++ K+++++ ++ +LI +F +P ++ L
Sbjct: 62 PALFEAFPTPEVMAASTPEVVFEYIRSVSYPNNKAKHLVGMAKMLIEDFKGVVPSDIDEL 121
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPK 189
+LPG+GRK ANVI S+ + P + VDTH+FR+SNRIGL KTP + E+ L++ IP +
Sbjct: 122 QKLPGVGRKTANVIASVVYDKPAMAVDTHVFRVSNRIGLTNNSKTPLETEKELVKNIPEE 181
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
AH+WL+LHGRYVC ARKP+C+ C + CK
Sbjct: 182 LIPIAHHWLILHGRYVCLARKPKCEECGLKPWCKHF 217
>gi|167649003|ref|YP_001686666.1| endonuclease III [Caulobacter sp. K31]
gi|167351433|gb|ABZ74168.1| endonuclease III [Caulobacter sp. K31]
Length = 236
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 146/225 (64%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+ K S P +P E E I F F PK EL Y N +TL+ AV LSA
Sbjct: 5 ARKPSRPLVKKRPAAKRVSPAERERIEVLFSRFESLEDHPKTELRYSNPYTLVTAVALSA 64
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+TDV VNKAT LF++AD+ KML +GE L YI +IG++R K++N+I+ + IL++
Sbjct: 65 QATDVQVNKATGPLFQVADSAAKMLELGEAGLIPYIASIGLFRTKAKNVIAAARILVDRH 124
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P E L LPG+GRK A+V+L+ P I VDTH+FR+S+R+ L+ GKTP+ VE
Sbjct: 125 GGEVPLNREALESLPGVGRKTASVVLNELDIEPAIAVDTHVFRVSHRLKLSAGKTPDAVE 184
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+R++P +++ AH+WL+LHGRYVC ARKP+C+ C IS+LC
Sbjct: 185 ADLMRVVPDRYKTRAHHWLILHGRYVCVARKPKCELCRISDLCPS 229
>gi|222153264|ref|YP_002562441.1| endonuclease III [Streptococcus uberis 0140J]
gi|222114077|emb|CAR42485.1| putative endonuclease III [Streptococcus uberis 0140J]
Length = 218
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 122/204 (59%), Gaps = 1/204 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L++I + + +P KGEL + + L++AV+LSAQ+TD VNK T L+ + +
Sbjct: 7 RLKKIMAIIADMFPEAKGELEWEKPYQLLIAVILSAQTTDKAVNKVTPFLWAKYPNLEDL 66
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ +++IG+Y+ K+ NII + IL++ ++ ++P+T + L LPG+GRK ANV
Sbjct: 67 ASANLTDVELILKSIGLYKTKARNIIKTAQILVDNYNGQVPKTHKELETLPGVGRKTANV 126
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L + IP I VDTH+ R++ R+ ++ ++E L++ IP K +H+ L+ G
Sbjct: 127 VLGEVYAIPGIAVDTHVSRVAKRLNISSQDADVKEIEADLMQKIPKKDWVISHHRLIFFG 186
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
RY C A+ P+C+ C + + C K
Sbjct: 187 RYHCLAKNPKCEVCPLQSYCLYYK 210
>gi|193214276|ref|YP_001995475.1| endonuclease III [Chloroherpeton thalassium ATCC 35110]
gi|193087753|gb|ACF13028.1| endonuclease III [Chloroherpeton thalassium ATCC 35110]
Length = 213
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 127/207 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++LE + + K P+PK EL Y F L+VA +L+AQ TD VN T LF+
Sbjct: 1 MTRDEKLELVAKILGAKHPAPKTELNYETPFQLLVATILAAQCTDKRVNLVTAALFQRYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M + + L+ I++I K++NI+ S L+ +++ ++P TL+ LT LPG+GR
Sbjct: 61 DAKSMSELSFEALREEIKSINFLNNKAKNILDSSKALVEKYNGEVPDTLDALTALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG P + VDTH+ R++NR+GLA K E L+ I+P + H++L
Sbjct: 121 KTAHVVMSNAFGKPVLAVDTHVHRVANRLGLANSKNVRDTENQLMEILPESLVSDFHHYL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+LHGRY CKAR PQC +C ++++C
Sbjct: 181 ILHGRYTCKARSPQCMNCELTHICNYF 207
>gi|170733686|ref|YP_001765633.1| endonuclease III [Burkholderia cenocepacia MC0-3]
gi|169816928|gb|ACA91511.1| endonuclease III [Burkholderia cenocepacia MC0-3]
Length = 214
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 141/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNASKRRAIYETLQSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + YI+TIG+YR K++N+++ IL+ +D ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVTEYIKTIGLYRTKAKNVVATCRILLERYDGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|154245577|ref|YP_001416535.1| endonuclease III [Xanthobacter autotrophicus Py2]
gi|154159662|gb|ABS66878.1| endonuclease III [Xanthobacter autotrophicus Py2]
Length = 359
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/210 (49%), Positives = 150/210 (71%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+++ +E+ E F F + P PKGEL + + FTL+VAV+LSAQ+TD VNKAT LF A
Sbjct: 148 LVWSEEEIAEAFARFEAQDPEPKGELNHTDAFTLLVAVVLSAQATDTGVNKATTGLFAAA 207
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP M+ +GE+++ IRT+G+YR K++N++ LS +L+ +P+ E L LPG+G
Sbjct: 208 ATPAAMVTLGEEEVARRIRTLGLYRGKAKNVVELSRLLLERHAGMVPRDREALEALPGVG 267
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L++AFG PTI VDTH+FR++NR GLAPG TP VE L IP + + +AH+W
Sbjct: 268 RKTANVVLNIAFGAPTIAVDTHLFRVANRTGLAPGPTPLAVELGLEARIPDRFKLHAHHW 327
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+CKA +P+C CII++LC+ ++
Sbjct: 328 LILHGRYICKASRPECGRCIIADLCRWPEK 357
>gi|332523442|ref|ZP_08399694.1| endonuclease III [Streptococcus porcinus str. Jelinkova 176]
gi|332314706|gb|EGJ27691.1| endonuclease III [Streptococcus porcinus str. Jelinkova 176]
Length = 216
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+L ++ + +P KGEL + F L++AV+LSAQ+TD VNK T L+ +
Sbjct: 5 RDKLRQVLTIIGQMFPEAKGELDWDTPFHLLIAVILSAQTTDKAVNKITPALWAKYPEIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++N +RTIG+Y+ K++NII + +++ EF+ +IP+T + L LPG+GRK A
Sbjct: 65 DLANADLTDVENSLRTIGLYKNKAKNIIKTAQLILAEFNGQIPKTHKELEALPGVGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L +GIP+I VDTH+ R++ R+ ++ + ++E L++ +P K H+ L+
Sbjct: 125 NVVLGEVYGIPSIAVDTHVARVAKRLNISDQDASVAEIETDLMKKVPKKDWVITHHRLIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY C A+KP+C+ C + + C K+
Sbjct: 185 FGRYHCLAKKPKCEVCPLQSYCLYYKE 211
>gi|317180356|dbj|BAJ58142.1| endonuclease III [Helicobacter pylori F32]
Length = 216
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 3 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPSVKDLALASLEEVKGIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPPTQKELMSLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSDANTPIKTEEELSVLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 182 HALILFGRYTCKAKNPLCGACFLKEFC 208
>gi|323525305|ref|YP_004227458.1| endonuclease III [Burkholderia sp. CCGE1001]
gi|323382307|gb|ADX54398.1| endonuclease III [Burkholderia sp. CCGE1001]
Length = 214
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 146/205 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL + F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLQSLNPHPTTELEHTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+L +GE+ + NYI+TIG+YR K++N+I+ IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PQKVLELGEEGVANYIKTIGLYRNKAKNVIATCRILLDQYGGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +++AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPTEFKHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C+I LC+
Sbjct: 181 LHGRYVCKARRPECWHCVIEPLCEF 205
>gi|288556139|ref|YP_003428074.1| endonuclease III [Bacillus pseudofirmus OF4]
gi|288547299|gb|ADC51182.1| endonuclease III [Bacillus pseudofirmus OF4]
Length = 218
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L++AV+LSAQ TD VNK T LF
Sbjct: 1 MLSKKQTIEVLDIIAEMYPDAECELTHSNPFELLIAVVLSAQCTDALVNKVTPGLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ +A ++L+ IR IG++R K++NI LS L+ +++ ++P+ + L +L G+GR
Sbjct: 61 QPEDYIAAPLEELEEDIRRIGLFRSKAKNIKKLSQSLVEQYNGEVPKDRDELVKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFG+P I VDTH+ R+S R+G+ N VEQ+L++ IP + ++H+
Sbjct: 121 KTANVVTSVAFGVPAIAVDTHVERVSKRLGICRWKDNVNVVEQTLMKKIPIELWSDSHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C++C + + C+ K+
Sbjct: 181 LIFFGRYHCKAQSPKCETCPLLDRCREGKK 210
>gi|302381535|ref|YP_003817358.1| endonuclease III [Brevundimonas subvibrioides ATCC 15264]
gi|302192163|gb|ADK99734.1| endonuclease III [Brevundimonas subvibrioides ATCC 15264]
Length = 246
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/230 (45%), Positives = 140/230 (60%), Gaps = 11/230 (4%)
Query: 6 KSDSYQGNSPLGCLY-----------TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVA 54
K+ + P G + +E IF S P PK EL + + FTL+VA
Sbjct: 10 KARAAPVRKPGGIMTGAPIPIFAWPPDEDRVEAIFTRLSTVMPEPKTELTFQDPFTLVVA 69
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V LSAQ+TDV VNKAT+ LF +ADTP KMLA+GE+ L YI +IG+YR K+ N+I+LS I
Sbjct: 70 VALSAQATDVAVNKATEKLFAVADTPAKMLALGEEGLVPYIASIGLYRGKARNVIALSRI 129
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
++ + P L LPG+GRK A+V+L+ P I VDTH++R+S+R+GLA T
Sbjct: 130 ILEQHGGVTPLNRADLQALPGVGRKTASVVLNELGIEPAIAVDTHVYRVSHRLGLANAGT 189
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+KVE L ++P AH+WL+LHGRY C ARKP C C+IS+LC
Sbjct: 190 ADKVEDQLHTVVPEAFLPKAHHWLILHGRYTCTARKPNCPGCVISDLCPS 239
>gi|254779423|ref|YP_003057528.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Helicobacter pylori B38]
gi|254001334|emb|CAX29319.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Helicobacter pylori B38]
Length = 216
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 3 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPSVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ K P K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANYIAVDTHVFRATHRLGLSNAKDPIKTEEELSDLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 182 HALILFGRYTCKAKNPLCSACFLKEFC 208
>gi|227832036|ref|YP_002833743.1| endonuclease III [Corynebacterium aurimucosum ATCC 700975]
gi|227453052|gb|ACP31805.1| endonuclease III [Corynebacterium aurimucosum ATCC 700975]
Length = 232
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 123/223 (55%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ S S ++P + I + ++P EL + + L+VA +LSAQ
Sbjct: 8 VTRVTSMSPDLSAPHDDATEAARIVHIRTALAEEYPDADCELDFTSPLELLVATVLSAQC 67
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN+ T LF + A L+ +R +G R K+ +++ + L+ +FD
Sbjct: 68 TDARVNQVTPELFAAYPSAPDYAAADRADLERILRPLGFQRAKAGHLLGIGEKLVADFDG 127
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++PQ ++ LT LPG+GRK A V+ AFG+P I VDTH+ R+S R+GL KTP +E+
Sbjct: 128 QVPQGIDELTSLPGVGRKTALVVRGNAFGLPGITVDTHVTRLSQRLGLTGAKTPRAIERD 187
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + +P + Q + L+LHGR VC ARKP+C +C+++ C
Sbjct: 188 VAKRVPEEEQTVFSHRLILHGRRVCTARKPKCAACVLAPWCPS 230
>gi|209516098|ref|ZP_03264957.1| endonuclease III [Burkholderia sp. H160]
gi|209503382|gb|EEA03379.1| endonuclease III [Burkholderia sp. H160]
Length = 214
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLQSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRRMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+ +GE+ + +YI+TIG+YR K++N+I+ IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PQKVFDLGEEGVASYIKTIGLYRTKAKNVIATCRILLDQYGGEVPEDREALEGLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +++AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFRHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|108805468|ref|YP_645405.1| DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
[Rubrobacter xylanophilus DSM 9941]
gi|108766711|gb|ABG05593.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rubrobacter xylanophilus DSM 9941]
Length = 214
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + E+ ++P K L + N L+VAV+LSAQ TD VN+ T+ LF T
Sbjct: 1 MSAAPVGEVIARLKREYPDAKTALNWSNPLELLVAVILSAQCTDERVNRVTERLFRKYRT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++L+ IR G YR K+ I ++ L+ ++P+T+E L LPG+GRK
Sbjct: 61 AEDYASAPLEELEQDIRPTGFYRNKARAIQGMARALLERHGGEVPKTMEELVALPGVGRK 120
Query: 140 GANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+L AFG+ + VDTH+ R+S R+GL P K+E+ LL +P + + + L
Sbjct: 121 TANVVLGNAFGVNEGVVVDTHVRRVSRRLGLTSSDDPEKIERDLLPQVPEEERTLFAHLL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR VCKAR+P C C+++++C
Sbjct: 181 IFHGRRVCKARRPDCPGCVLNDICPS 206
>gi|300692031|ref|YP_003753026.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Ralstonia
solanacearum PSI07]
gi|299079091|emb|CBJ51753.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Ralstonia
solanacearum PSI07]
Length = 214
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 107/205 (52%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +ADT
Sbjct: 1 MNPAKRRALFETLREHNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL+++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKCKHILQTCRILLDQHGGQVPRDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|298528182|ref|ZP_07015586.1| endonuclease III [Desulfonatronospira thiodismutans ASO3-1]
gi|298511834|gb|EFI35736.1| endonuclease III [Desulfonatronospira thiodismutans ASO3-1]
Length = 213
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 4/210 (1%)
Query: 20 YTPKEL---EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ E+ +P+P L + + + L+VA +LSAQ TDV VNK T LF
Sbjct: 1 MKKTRIFLPREVVKRLRKSYPAPATALKWQSPWELLVATILSAQCTDVQVNKITPGLFSR 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
P+ + +++Q IR G +R KS NII I+ F ++P +E L LPG+
Sbjct: 61 WPDPKSLSMADPQEVQEVIRPAGFFRTKSRNIIQAGEIINRRFQGRVPADMEDLMSLPGV 120
Query: 137 GRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
K AN++L A+GI VDTH+ R + R+GL + P K+E+ L+ + +
Sbjct: 121 ASKTANIVLYGAYGINAGVAVDTHVKRTARRLGLTRSQDPGKIEKDLMSQFEQDDWGDLN 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LVL GR C+ARKP C C + +C +
Sbjct: 181 HMLVLLGRETCRARKPLCGECPLFEICPKF 210
>gi|110640061|ref|YP_680271.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Cytophaga hutchinsonii ATCC 33406]
gi|110282742|gb|ABG60928.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Cytophaga hutchinsonii ATCC 33406]
Length = 218
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ FS P P+ EL Y N + L+VAV LSAQ TD VN T LF
Sbjct: 1 MQRKERFEKFLDYFSTHSPEPETELVYSNPYELLVAVSLSAQCTDKRVNLTTPALFNRYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ +YIR+I K+++++ ++ +L+ +F+ ++P T+E L +LPG+GR
Sbjct: 61 DAASLAKATSDEVFHYIRSISYPNNKAKHLVGMAQMLMKDFNGEVPDTVEDLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ + PT+ VDTH++R+S RIGL P TP VE+ L++ IP + AH+
Sbjct: 121 KTANVIASVIWQQPTMAVDTHVYRVSRRIGLVPQTATTPLAVEKQLMKYIPTALVHKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LHGRY C AR P+C+ C ++ +C +
Sbjct: 181 WLILHGRYTCLARTPKCEVCPVTEICMWYSK 211
>gi|313202693|ref|YP_004041350.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Paludibacter propionicigenes WB4]
gi|312442009|gb|ADQ78365.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Paludibacter propionicigenes WB4]
Length = 212
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + I F+ P + EL+Y + F L+VAV+LSAQ TD VN T L
Sbjct: 1 MTTKQRYTHIIDWFTKNMPVAETELHYTDPFGLLVAVILSAQCTDKRVNMITPRLLADFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + YI++I K+++++ ++ L+++F+ +P + L LPG+GR
Sbjct: 61 TPEAMAATNHEVIFEYIKSISYPNNKAKHLVGMAQKLVSDFNGVMPDDVAMLQTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ F PT+ VDTH+FRIS R+GL K P + EQ L++ IP AH+W
Sbjct: 121 KTANVIASVVFNKPTMAVDTHVFRISERLGLTTNSKNPLQTEQELVKYIPADLIPKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGRYVC ARKP+C+ C I+ C+ K
Sbjct: 181 LILHGRYVCLARKPKCEECGITEWCRFYK 209
>gi|220906788|ref|YP_002482099.1| endonuclease III [Cyanothece sp. PCC 7425]
gi|219863399|gb|ACL43738.1| endonuclease III [Cyanothece sp. PCC 7425]
Length = 230
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI +P L Y + L+VA +LSAQ TD VN+ T LF
Sbjct: 10 KQQRALEILIRLKRLYPDATCSLTYASPVQLLVATILSAQCTDERVNQVTPELFRRFPDA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L++ IR+ G YR K+ NI L+ + ++P+ ++ L LPG+ RK
Sbjct: 70 LALAEADLTELESLIRSTGFYRAKARNIQGACQRLVQVYGGQVPKVMDDLLTLPGVARKT 129
Query: 141 ANVILSMAFGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FGI DTH+ R+S R+GL P KVE+ L+R++P N L+
Sbjct: 130 ANVVLAHGFGINMGVTVDTHVKRLSYRLGLTEHSDPVKVERDLIRLLPQPDWENWSIRLI 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR VCKARKP C C +++LC
Sbjct: 190 YHGRQVCKARKPDCDRCELADLCPS 214
>gi|198284393|ref|YP_002220714.1| endonuclease III [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665362|ref|YP_002427058.1| endonuclease III [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248914|gb|ACH84507.1| endonuclease III [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517575|gb|ACK78161.1| endonuclease III [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 220
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 91/205 (44%), Positives = 132/205 (64%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P+ + F P PK EL Y + F L+VAV+LSAQSTD VN T+ LF +A
Sbjct: 1 MDPQNIRRCFAALRAAIPEPKTELIYGSPFQLLVAVVLSAQSTDKAVNACTRTLFAVAPN 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ M+++GE ++ +I +G++ K+ ++ +L+ L+ D ++P + L LPG+GRK
Sbjct: 61 PEAMVSLGEDGIKAHIHRLGLFNAKARHVHALARQLLALHDGEVPADRKALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FG PTI VDTHIFR+ NR G+APGKTP VEQ+LL +P +++ +AH+ L+
Sbjct: 121 TANVVLNTEFGQPTIAVDTHIFRVGNRTGIAPGKTPLAVEQALLAAVPAEYRQDAHHLLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY C AR+P C C I C+
Sbjct: 181 LHGRYTCTARRPHCGHCPIFQCCEW 205
>gi|168177542|ref|ZP_02612206.1| endonuclease III [Clostridium botulinum NCTC 2916]
gi|182670644|gb|EDT82618.1| endonuclease III [Clostridium botulinum NCTC 2916]
Length = 213
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L+ I+ IG+YR KS+NI+ L L +F +++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L ++IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVGASNVLKTEEQLQQVIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|15828233|ref|NP_302496.1| endonuclease III [Mycobacterium leprae TN]
gi|221230710|ref|YP_002504126.1| putative endonuclease III [Mycobacterium leprae Br4923]
gi|13093926|emb|CAC31817.1| putative endonuclease III [Mycobacterium leprae]
gi|219933817|emb|CAR72399.1| putative endonuclease III [Mycobacterium leprae Br4923]
Length = 253
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G + LG + + + +P EL + + L VA +LSAQSTD V
Sbjct: 10 ARRWSGETRLGLVR---RARRMNRALAQAFPHVYCELDFTSPLELTVATILSAQSTDKRV 66
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T +F + + +L+N+IR G +R K+ ++I L L+ FD ++P T
Sbjct: 67 NLTTPAVFARYRSALDYMQADRAELENFIRPTGFFRNKAASLIRLGQALVERFDGEVPST 126
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L LPG+GRK ANVIL AFGIP I VDTH R+ R + P KVE ++ +I
Sbjct: 127 MVDLFTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTAEEDPVKVEHAVGELI 186
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ HGR VC ARKP C C+++ C
Sbjct: 187 ERDQWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSF 225
>gi|15213993|sp|Q9CB92|END3_MYCLE RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
Length = 245
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + G + LG + + + +P EL + + L VA +LSAQSTD V
Sbjct: 2 ARRWSGETRLGLVR---RARRMNRALAQAFPHVYCELDFTSPLELTVATILSAQSTDKRV 58
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T +F + + +L+N+IR G +R K+ ++I L L+ FD ++P T
Sbjct: 59 NLTTPAVFARYRSALDYMQADRAELENFIRPTGFFRNKAASLIRLGQALVERFDGEVPST 118
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L LPG+GRK ANVIL AFGIP I VDTH R+ R + P KVE ++ +I
Sbjct: 119 MVDLFTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTAEEDPVKVEHAVGELI 178
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ HGR VC ARKP C C+++ C
Sbjct: 179 ERDQWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSF 217
>gi|84503481|ref|ZP_01001536.1| endonuclease III [Oceanicola batsensis HTCC2597]
gi|84388159|gb|EAQ01112.1| endonuclease III [Oceanicola batsensis HTCC2597]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 108/203 (53%), Positives = 153/203 (75%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L+EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF++ADTPQKML
Sbjct: 10 LKEIFDRFQAADPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRGLFQVADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ + +I+TIG+YR K++N+I LS IL++++ ++P + L LPG+GRK ANV+
Sbjct: 70 ALGEEGVIEHIKTIGLYRNKAKNVIKLSRILVDDYGGEVPSSRAALQALPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P VDTHIFR+ NR G+APGK N VE+++ +P ++Q + H+WL+LHGRY
Sbjct: 130 LNMWWGHPAQAVDTHIFRVGNRTGIAPGKDVNVVERAIEDHVPAEYQRHVHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C ARKP+C +CII +LC+ ++
Sbjct: 190 TCVARKPRCAACIIRDLCEYEEK 212
>gi|317064989|ref|ZP_07929474.1| endonuclease III [Fusobacterium ulcerans ATCC 49185]
gi|313690665|gb|EFS27500.1| endonuclease III [Fusobacterium ulcerans ATCC 49185]
Length = 213
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L Y F L+VAV+LSAQ TDV VN TK +++ +
Sbjct: 1 MTKKEKVKKILEKLHEKFGDPKCALDYKTPFELLVAVILSAQCTDVRVNIVTKEMYKKVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ A+ +K++ I++ G +R K++NI S L+++++ +IP+ ++ L L G+GR
Sbjct: 61 TPEGFAALPVEKIEEMIKSTGFFRNKAKNIKLCSQQLLSKYNGEIPKDMDKLIELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R++N IGL P K+EQ L++I+P K + ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRLTNLIGLVKNDDPVKIEQELMKIVPKKDWIDFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+L GR C AR+P+C C I C K
Sbjct: 181 LILQGRDKCIARRPKCSECEIREFCNHGK 209
>gi|160947532|ref|ZP_02094699.1| hypothetical protein PEPMIC_01466 [Parvimonas micra ATCC 33270]
gi|158446666|gb|EDP23661.1| hypothetical protein PEPMIC_01466 [Parvimonas micra ATCC 33270]
Length = 215
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 126/207 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +++ + +P K EL + N F L++A +LSAQ TDV VNK T+ LF T
Sbjct: 7 LSKEKINIVMEKLEKLYPDAKPELNFSNSFELLIATILSAQCTDVRVNKVTEKLFRDFKT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++ L + + L YI + G Y KS+NI+ IL+ ++++ +P +E LT LPG+GRK
Sbjct: 67 PKEFLTLNIEDLSKYIHSCGFYNSKSKNILETCRILVEKYNSTVPSDMESLTTLPGVGRK 126
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+ S AFGIP++ VDTH+FR++NRIG+ E +L++ + AH+ +
Sbjct: 127 TANVVRSCAFGIPSLAVDTHVFRVTNRIGIINEGNVLDSEFALMKKLKKNTWNKAHHLFI 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VCK+RKP C+ CII++ C K
Sbjct: 187 FHGRRVCKSRKPNCEKCIINSECLYYK 213
>gi|168182181|ref|ZP_02616845.1| endonuclease III [Clostridium botulinum Bf]
gi|237793528|ref|YP_002861080.1| endonuclease III [Clostridium botulinum Ba4 str. 657]
gi|182674545|gb|EDT86506.1| endonuclease III [Clostridium botulinum Bf]
gi|229261588|gb|ACQ52621.1| endonuclease III [Clostridium botulinum Ba4 str. 657]
Length = 213
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L+ I+ IG+YR KS+NI+ L L +F +++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L ++IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQVIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|27262162|gb|AAN87362.1| Endonuclease III [Heliobacillus mobilis]
Length = 219
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 84/199 (42%), Positives = 129/199 (64%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
E I + +P K L + N F L++A +L+AQ+TD +VNK T LF TP+ ML+
Sbjct: 8 ESILTTLAEMYPDAKCALIFRNPFELLIATILAAQATDKSVNKITPGLFSRFPTPESMLS 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +++L+ I++IG+Y+ K+ NI++ +L+ ++ ++P L LPG+GRK A+V+L
Sbjct: 68 LTQEELEQEIKSIGLYKNKARNILATCRLLVEKYGGQVPSVRVDLESLPGVGRKTASVVL 127
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ AF IP I VDTH+FR+SNR+GLA GK K E+ L++ IP AH+WL++HGR V
Sbjct: 128 AEAFQIPAIAVDTHVFRVSNRLGLAQGKDVVKTEEDLMKNIPMDQWRIAHHWLIIHGRQV 187
Query: 206 CKARKPQCQSCIISNLCKR 224
C ARKP C C ++ C+
Sbjct: 188 CHARKPACGDCALTAYCRH 206
>gi|221236783|ref|YP_002519220.1| endonuclease III [Caulobacter crescentus NA1000]
gi|220965956|gb|ACL97312.1| endonuclease III [Caulobacter crescentus NA1000]
Length = 276
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 149/222 (67%), Gaps = 3/222 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
K+ + +P + E + F F PK EL Y N + L+ AV LSAQ+T
Sbjct: 48 KTPVRKAARKPVKRLSPAQRERVAVLFDRFEGLDLHPKTELNYSNAYELVTAVALSAQAT 107
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VNKAT LF++A++ + MLA+GE+ L YI +IG++R K++N+I+ +HI++N+ +
Sbjct: 108 DVQVNKATGPLFQVANSAEAMLALGEEGLTKYIASIGLFRSKAKNVIAAAHIIMNQHGGE 167
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P E L LPG+GRK A+V+L+ P I VDTH+FR+S+R+ L+ GKTP+ VEQ L
Sbjct: 168 VPLNREDLEALPGVGRKTASVVLNELDIEPAIAVDTHVFRVSHRLKLSSGKTPDAVEQDL 227
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+R++PP +Q AH+WL+LHGRYVC ARKP+C+ C IS+LC
Sbjct: 228 MRVVPPPYQTRAHHWLILHGRYVCVARKPKCEICKISDLCPS 269
>gi|16127961|ref|NP_422525.1| endonuclease III [Caulobacter crescentus CB15]
gi|13425501|gb|AAK25693.1| endonuclease III [Caulobacter crescentus CB15]
Length = 241
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 149/222 (67%), Gaps = 3/222 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
K+ + +P + E + F F PK EL Y N + L+ AV LSAQ+T
Sbjct: 13 KTPVRKAARKPVKRLSPAQRERVAVLFDRFEGLDLHPKTELNYSNAYELVTAVALSAQAT 72
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
DV VNKAT LF++A++ + MLA+GE+ L YI +IG++R K++N+I+ +HI++N+ +
Sbjct: 73 DVQVNKATGPLFQVANSAEAMLALGEEGLTKYIASIGLFRSKAKNVIAAAHIIMNQHGGE 132
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P E L LPG+GRK A+V+L+ P I VDTH+FR+S+R+ L+ GKTP+ VEQ L
Sbjct: 133 VPLNREDLEALPGVGRKTASVVLNELDIEPAIAVDTHVFRVSHRLKLSSGKTPDAVEQDL 192
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+R++PP +Q AH+WL+LHGRYVC ARKP+C+ C IS+LC
Sbjct: 193 MRVVPPPYQTRAHHWLILHGRYVCVARKPKCEICKISDLCPS 234
>gi|113867167|ref|YP_725656.1| endonuclease III protein [Ralstonia eutropha H16]
gi|113525943|emb|CAJ92288.1| Endonuclease III protein [Ralstonia eutropha H16]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +A T
Sbjct: 1 MNAAKCRAIFETLRETNPAPATELEYSSPFELLIAVLLSAQATDVGVNKATRRLFPVAHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++ML +GE L YI+TIG+Y+ K++++I IL+ K+P E L LPG+GRK
Sbjct: 61 PRQMLDLGEAGLSEYIKTIGLYKTKAKHVIETCRILVERHGGKVPPEREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGKT VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKTVQIVEQKLLKCVPHEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C+I LC+ ++
Sbjct: 181 LHGRYVCKARKPECWHCVIEPLCEFREK 208
>gi|328949198|ref|YP_004366535.1| endonuclease III [Treponema succinifaciens DSM 2489]
gi|328449522|gb|AEB15238.1| endonuclease III [Treponema succinifaciens DSM 2489]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 152/205 (74%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L TP+++ ++F F PSP+ EL N F L+V+V+LSAQ+TD VNKAT+ L+++A
Sbjct: 2 KLLTPQQISQVFLRFQKLNPSPETELVAPNAFCLLVSVVLSAQTTDKAVNKATESLYKVA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ MLA+GE+K++ +I++IG+Y+ K+++++ LS +L+ +F++++P E L LPG+G
Sbjct: 62 YTPELMLALGEEKIRGFIKSIGLYKNKAKHVVGLSKMLVEKFNSQVPDNREDLESLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANVIL++ + PT+ VDTH+ RI +IGLA G TP +VE+SLL IP + +AH+W
Sbjct: 122 RKTANVILNVVYHKPTMPVDTHLLRICPKIGLAQGSTPLEVERSLLERIPSEFMMHAHHW 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+LHGRY+C AR P+C C I++LC
Sbjct: 182 LILHGRYICTARSPKCAECPINDLC 206
>gi|17231462|ref|NP_488010.1| endonuclease III [Nostoc sp. PCC 7120]
gi|17133104|dbj|BAB75669.1| endonuclease III [Nostoc sp. PCC 7120]
Length = 223
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ L + EI +P L Y L+VA +LSAQ TD VN T
Sbjct: 2 STTTRKSLSKKQRALEILSRLKRLYPDATCSLNYTTTVQLLVATILSAQCTDERVNLVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF + +L+N +R+ G YR K++NI + ++++EF++ +P T+E L
Sbjct: 62 ALFSRFPDAPSLANADLTELENLVRSTGFYRNKAKNIQAACRMIVSEFNSAVPNTMEQLL 121
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+ RK ANV+L+ A+GI + VDTH+ R+S R+GL P +EQ L++++P
Sbjct: 122 KLPGVARKTANVVLAHAYGINAGVTVDTHVKRLSQRLGLTKYPDPVHIEQDLMKLLPQPD 181
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
N L+ HGR VCKAR P C++C +++LC +
Sbjct: 182 WENWSIRLIYHGRAVCKARSPVCEACELADLCPSATK 218
>gi|118602912|ref|YP_904127.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567851|gb|ABL02656.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 210
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++F K P+P EL Y F L+VAV LSAQ+TD +VNK T LF IA+T
Sbjct: 1 MNSETRTKMFGRLLKKIPNPTTELNYSTPFELLVAVTLSAQATDKSVNKVTDKLFPIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +GE L++ IR IG++ K+++II ILI ++ + +P+T + L LPG+GRK
Sbjct: 61 PETIFELGEDTLRDTIRAIGLFNSKAKHIIQACKILIEKYSSSVPETRKELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R++NR +A GKT +VE+ L++ IP +++ AH+ ++
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLVKFIPDEYRVPAHHLMI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY CKAR P C CI+ +LC+ ++
Sbjct: 181 LHGRYTCKARSPLCTECILLDLCEYEEK 208
>gi|241662548|ref|YP_002980908.1| endonuclease III [Ralstonia pickettii 12D]
gi|240864575|gb|ACS62236.1| endonuclease III [Ralstonia pickettii 12D]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 103/205 (50%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + IF P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNPAKRHAIFETLRENNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+LA+GE+ + YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKLLALGEEGITEYIKTIGLYRTKCKHILQTCRILLDQYGGEVPRDRAALEELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PTI VDTHIFR++NR GLAPGK +VE L++++P + +AH+WL+
Sbjct: 121 TANVVMNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLMKVVPEAFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|163732616|ref|ZP_02140061.1| endonuclease III [Roseobacter litoralis Och 149]
gi|161393976|gb|EDQ18300.1| endonuclease III [Roseobacter litoralis Och 149]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTPQKML
Sbjct: 10 IREIFTRFRAADPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + +I+TIG++R+K++N+I LS IL++++ +P + L LPG+GRK ANV+
Sbjct: 70 DLGIDGVTEHIKTIGLFRQKAKNVIKLSQILVDQYGGVVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGKT + VE+++ IP Q +AH+W++LHGRY
Sbjct: 130 LNMWWQQPAQAVDTHIFRLGNRTGIAPGKTVDVVERAIEDNIPADFQLHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C++CII++LC
Sbjct: 190 HCKARKPLCRTCIINDLCPF 209
>gi|84515982|ref|ZP_01003343.1| endonuclease III [Loktanella vestfoldensis SKA53]
gi|84510424|gb|EAQ06880.1| endonuclease III [Loktanella vestfoldensis SKA53]
Length = 246
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 148/203 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ IF F + P P+GEL +VN +TL+VAV LSAQ+TD VNKAT+ LF +ADTPQKML
Sbjct: 42 IRAIFARFQAEAPEPEGELEHVNAYTLVVAVALSAQATDKGVNKATRGLFAVADTPQKML 101
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + +++TIG++R+K++NII +S IL+++F ++P + L LPG+GRK ANV+
Sbjct: 102 DLGLDGVTEHVKTIGLFRQKAKNIIKMSQILVDDFGGEVPNSRAALQLLPGVGRKTANVV 161
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P VDTHI+R NR G+APG+ + VE+++ IP +Q +AH+W++LHGRY
Sbjct: 162 LNMWWGQPAQAVDTHIYRFGNRSGVAPGRDVDAVERAIEDHIPADYQLHAHHWMILHGRY 221
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC ARKP+C +C+I +LC ++
Sbjct: 222 VCVARKPKCGACLIRDLCLYEEK 244
>gi|221067600|ref|ZP_03543705.1| endonuclease III [Comamonas testosteroni KF-1]
gi|220712623|gb|EED67991.1| endonuclease III [Comamonas testosteroni KF-1]
Length = 218
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ F P+P+ EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKKNDIAPFFAALKAANPTPQTELEYTTVFELLTAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG+YR K+++++ +L+ ++P T E L LPG+GRK
Sbjct: 61 PQAILDLGVEGLESYIKTIGLYRSKAKHLMETCRMLVQLHGGRVPSTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+ NR GLAPGK P +VE+ LL+ +P ++ ++H+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVGNRTGLAPGKNPLEVEKQLLKRVPDEYAVDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C++S C
Sbjct: 181 LLGRYVCQARKPRCWECVVSQYCDF 205
>gi|291166112|gb|EFE28158.1| endonuclease III [Filifactor alocis ATCC 35896]
Length = 211
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 89/204 (43%), Positives = 128/204 (62%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +I + +P K EL Y + L++A +LSAQSTD VN TK LF +TP KM
Sbjct: 3 KARKIVSVLQELYPEAKCELNYRTPYELLIATMLSAQSTDKRVNIITKDLFASYNTPDKM 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+++ E +L IRTIG Y K++NI+ SHIL+ ++ ++P+T E L +LPG+GRK ANV
Sbjct: 63 VSLSEGELIELIRTIGFYNNKAKNILMTSHILLEKYGGEVPKTREELVKLPGVGRKTANV 122
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
++S AFGIP VDTH+ R++NR+GL K PN++E + +P K AH+ + HGR
Sbjct: 123 VISNAFGIPAFAVDTHVGRVTNRLGLTKSKNPNQIEIDVTSQLPKKLYTQAHHLFIFHGR 182
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
CKA +P C SC ++ C KQ
Sbjct: 183 KCCKAIRPLCDSCPLTVNCTYYKQ 206
>gi|326201977|ref|ZP_08191847.1| endonuclease III [Clostridium papyrosolvens DSM 2782]
gi|325987772|gb|EGD48598.1| endonuclease III [Clostridium papyrosolvens DSM 2782]
Length = 210
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 115/209 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ ++ + +P + L Y N L+++ L+AQ TD VN K+L++
Sbjct: 1 MTKKEKVLQMIEVLDKLYPDAECSLMYENPLQLLISTQLAAQCTDARVNIVAKNLYKKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++L+ I++ G YR K++NII I+ +++ IP +E L LPG+GR
Sbjct: 61 SVEAFANANIRELEEDIKSTGFYRNKAKNIIGCCKIITDKYSGIIPDNMEELLELPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+ L G + VDTH R+SNR GL + P K+E L +IIP + + L
Sbjct: 121 KTANLYLYEIHGKQGVVVDTHAKRLSNRTGLTKNEDPEKIEYDLQKIIPEDKWADFCHKL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V HGR VC ARKP+C+ C I++LC +
Sbjct: 181 VFHGRAVCNARKPECEKCEINHLCSYYTK 209
>gi|154493703|ref|ZP_02033023.1| hypothetical protein PARMER_03044 [Parabacteroides merdae ATCC
43184]
gi|154086913|gb|EDN85958.1| hypothetical protein PARMER_03044 [Parabacteroides merdae ATCC
43184]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 129/208 (62%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F+ P + EL+Y N + L++AV+LSAQ TD VN T LF
Sbjct: 1 MRKEERYKGVLNWFNEHVPVAETELHYDNPYQLLIAVILSAQCTDKRVNMITPALFRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + YIR++ KS++++ ++ +L+++FD +P ++ L +LPG+GR
Sbjct: 61 TPEVMAASTSEVIFEYIRSVSYPNNKSKHLVGMAKMLMSDFDGVVPSDIDELQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR++NRIGL KTP + E+ L++ IP + AH+W
Sbjct: 121 KTANVIASVVYNKPAMAVDTHVFRVANRIGLTNNSKTPLETEKELVKHIPEEQIPIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRY C ARKP+C+ C + CK
Sbjct: 181 LILHGRYTCIARKPKCEECGLKPWCKYF 208
>gi|255013506|ref|ZP_05285632.1| endonuclease III [Bacteroides sp. 2_1_7]
gi|262381706|ref|ZP_06074844.1| endonuclease III [Bacteroides sp. 2_1_33B]
gi|262296883|gb|EEY84813.1| endonuclease III [Bacteroides sp. 2_1_33B]
Length = 212
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F P + EL+Y + + L++AV+LSAQ TD VN T LFE
Sbjct: 1 MRKEERYKGVLNWFKENVPVAETELHYDDPYQLLIAVILSAQCTDKRVNMITPALFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + YIR++ K+++++ ++ +LI +F +P ++ L +LPG+GR
Sbjct: 61 TPEVMAASTPEVVFEYIRSVSYPNNKAKHLVGMAKMLIEDFKGVVPSDIDELQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR+SNRIGL KTP + E+ L++ IP + AH+W
Sbjct: 121 KTANVIASVVYDKPAMAVDTHVFRVSNRIGLTNNSKTPLETEKELVKNIPEELIPIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRYVC ARKP+C+ C + CK
Sbjct: 181 LILHGRYVCLARKPKCEECGLKPWCKHF 208
>gi|322369514|ref|ZP_08044079.1| endonuclease III [Haladaptatus paucihalophilus DX253]
gi|320551246|gb|EFW92895.1| endonuclease III [Haladaptatus paucihalophilus DX253]
Length = 228
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++L+EI ++P L + N L++AV+LSAQ TD VNK T+HLFE ++
Sbjct: 8 REEQLDEIVDRLYDEYPDATISLNFSNRLELLIAVMLSAQCTDERVNKETEHLFEKYESV 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L + +I Y K++ I S +I E D ++P T+ LT L G+GRK
Sbjct: 68 EDYANADVDELAEDLNSITYYNNKAKWIHSACGTIIEEHDGEVPDTMSELTDLTGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ R+S R+GL KTP K+E L+ +P + + +
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTEEKTPQKIESDLMTFVPEEDWQWLTHLFI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C AR P C CI+ ++C K
Sbjct: 188 SHGRATCTARNPDCGDCILEDICPSSK 214
>gi|15611599|ref|NP_223250.1| endonuclease III [Helicobacter pylori J99]
gi|4155080|gb|AAD06115.1| ENDONUCLEASE III [Helicobacter pylori J99]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++I L +P+ EL + N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 1 MSLKRAKTKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ KS+++IS+ ++ +F IP T + L L G
Sbjct: 61 KYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 121 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 180 HALILFGRYTCKAKNPLCDACFLKEFC 206
>gi|237738801|ref|ZP_04569282.1| endonuclease III [Fusobacterium sp. 2_1_31]
gi|229423904|gb|EEO38951.1| endonuclease III [Fusobacterium sp. 2_1_31]
Length = 216
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 131/209 (62%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILEELHKKFGEPKCALNFETPFELLVAVILSAQCTDKRVNIVTEEMFKEVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IPQ ++ LT L G+GR
Sbjct: 61 TPEQFANMEIEEIENYIKSTGFFRNKAKNIKKCSQQLLEKYNGEIPQDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ RI+N IGL + P K+EQ L++I+P K ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRITNLIGLVKSEDPIKIEQELMKIVPKKSWIVFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGR C AR+PQC++C IS+ C K
Sbjct: 181 LILHGRATCIARRPQCKNCEISDCCNYGK 209
>gi|309781130|ref|ZP_07675868.1| endonuclease III [Ralstonia sp. 5_7_47FAA]
gi|308920196|gb|EFP65855.1| endonuclease III [Ralstonia sp. 5_7_47FAA]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + IF P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNPAKRHAIFETLRENNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+LA+GE+ + YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKLLALGEEGITEYIKTIGLYRTKCKHILQTCRILLDQYGGEVPRDRAALEELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + +AH+WL+
Sbjct: 121 TANVVMNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEAFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|188995576|ref|YP_001929828.1| putative endonuclease III [Porphyromonas gingivalis ATCC 33277]
gi|188595256|dbj|BAG34231.1| putative endonuclease III [Porphyromonas gingivalis ATCC 33277]
Length = 224
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 5/214 (2%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F+ P + EL Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MRKEERYKAVIDWFAENMPVAETELRYRDPFQLLVAVILSAQCTDKRVNMVTPALFSAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M + L +YI +I K+++++ ++ +L ++F +P + LT+LPG+GR
Sbjct: 61 TAKDMAGSTVEDLLSYIGSISYPNSKAKHLVGMAQMLCSDFGGVVPDEVSELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ +G P + VDTH+FR+S RIGL G K+P + E+ L+R IP AH+W
Sbjct: 121 KTANVIASVVYGKPAMAVDTHVFRVSERIGLTTGSKSPLETERELVRYIPDVLIPKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR----IKQ 227
L+LHGRYVC ARKP+C C I+ C+ K+
Sbjct: 181 LILHGRYVCLARKPKCADCGIAPFCRYCSKVFKK 214
>gi|331700212|ref|YP_004336451.1| endonuclease III [Pseudonocardia dioxanivorans CB1190]
gi|326954901|gb|AEA28598.1| endonuclease III [Pseudonocardia dioxanivorans CB1190]
Length = 299
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 107/205 (52%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + I + +P EL + L VA +LSAQ+TDV VN+ T LF T
Sbjct: 55 RARRVGRILRALAAAYPDAHCELDFTTPLELAVATVLSAQTTDVRVNEVTPALFARYRTA 114
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+L+ IR G YR K+ ++I L +++ FD ++P LE L LPGIGRK
Sbjct: 115 LDYAQADRTELEELIRPTGFYRNKTSSLIGLGQAVVDRFDGELPARLEDLVTLPGIGRKT 174
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L AFG+P I VDTH R+ R G + P KVE ++ ++P + + ++
Sbjct: 175 ANVVLGNAFGVPGITVDTHFGRLVRRWGWTDEEDPVKVEHAVGALVPKRDWTIVSHQVIF 234
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR VC ARKP C C ++ C
Sbjct: 235 HGRRVCHARKPACGVCTLAVDCPAF 259
>gi|317492090|ref|ZP_07950521.1| endonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919973|gb|EFV41301.1| endonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 213
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL Y HF L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQEKRTLILQRLQENNPHPTTELAYSTHFELLIAVLLSAQATDVSVNKATALLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML +G ++ YI+TIG+Y K+ENII IL++E ++P+ L LPG+GRK
Sbjct: 61 PAAMLELGVDGIKQYIKTIGLYNSKAENIIKTCRILLDEHHGEVPENRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APGK ++VE LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGKNVDEVEAKLLKVVPKEFKLDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKEK 208
>gi|262200522|ref|YP_003271730.1| endonuclease III [Gordonia bronchialis DSM 43247]
gi|262083869|gb|ACY19837.1| endonuclease III [Gordonia bronchialis DSM 43247]
Length = 248
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 110/217 (50%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
S + + P L + + + +P EL + L VA +LSAQ TDV VN+
Sbjct: 2 SARTSKPETHLGLVRRARRMNRTLQVAFPHVYCELDFTTPLELSVATILSAQCTDVRVNQ 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF T Q +L+ IRT G YR K+ +II L LI FD ++P TL
Sbjct: 62 VTPALFARYRTAQDYAGADRTELEEMIRTTGFYRNKANSIIGLGQALIERFDGEVPHTLN 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG GRK ANV+L AFG+P I VDTH R+ R P KVE ++ +I
Sbjct: 122 ELVSLPGFGRKTANVVLGNAFGVPGITVDTHFGRLVRRWEWTTETDPVKVEHAVGELIER 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + + ++ HGR VC ARKP C CI++ C +
Sbjct: 182 KEWTDLSHRVIFHGRRVCHARKPACGVCILAKDCPSV 218
>gi|153941507|ref|YP_001389572.1| endonuclease III [Clostridium botulinum F str. Langeland]
gi|152937403|gb|ABS42901.1| endonuclease III [Clostridium botulinum F str. Langeland]
gi|295317669|gb|ADF98046.1| endonuclease III [Clostridium botulinum F str. 230613]
Length = 213
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L++ I+ IG+YR KS+NI+ L L +F +++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEDKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L + IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDANNVLKTEEQLQQAIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|170691835|ref|ZP_02882999.1| endonuclease III [Burkholderia graminis C4D1M]
gi|170143119|gb|EDT11283.1| endonuclease III [Burkholderia graminis C4D1M]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 104/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNANKRRAIYETLQSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQK+L +GE+ + NYI+TIG+YR K++N+I+ ILI ++ ++P+ E L LPG+GRK
Sbjct: 61 PQKVLELGEEGVANYIKTIGLYRNKAKNVIATCRILIEQYGGEVPEDREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + + +AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPDEFKKDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|308182741|ref|YP_003926868.1| endonuclease III [Helicobacter pylori PeCan4]
gi|308064926|gb|ADO06818.1| endonuclease III [Helicobacter pylori PeCan4]
Length = 218
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++I+++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEEVKEIIKSVSYFNNKSKHLINMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCDACFLKEFC 210
>gi|226303971|ref|YP_002763929.1| endonuclease III [Rhodococcus erythropolis PR4]
gi|229492134|ref|ZP_04385943.1| endonuclease III [Rhodococcus erythropolis SK121]
gi|226183086|dbj|BAH31190.1| endonuclease III [Rhodococcus erythropolis PR4]
gi|229320922|gb|EEN86734.1| endonuclease III [Rhodococcus erythropolis SK121]
Length = 261
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 107/222 (48%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
KK S L + + ++ +P EL + L VA +LSAQ TD
Sbjct: 12 RKKPRSGGARKEESHLGLVRRARRMNRELAVAFPHVYCELDFTTPLELAVATILSAQCTD 71
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V VN T LF + +L+ YIR+ G YR K+ ++I L L+ D ++
Sbjct: 72 VRVNMVTPALFARYPDAKAYAEADRTELEEYIRSTGFYRNKTTSLIGLGQALLERHDGQV 131
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P LE L +LPGIGRK ANV+L AF IP I VDTH R+ R + KVE ++
Sbjct: 132 PNKLEDLVKLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWKWTEEEDAVKVEHAVG 191
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+I K + ++ HGR VC ARKP C C+++ C
Sbjct: 192 ALIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 233
>gi|134096945|ref|YP_001102606.1| putative endonuclease III [Saccharopolyspora erythraea NRRL 2338]
gi|291006613|ref|ZP_06564586.1| putative endonuclease III [Saccharopolyspora erythraea NRRL 2338]
gi|133909568|emb|CAL99680.1| putative endonuclease III [Saccharopolyspora erythraea NRRL 2338]
Length = 245
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +P EL + L VA +LSAQ TD VN+ T LF+ T +
Sbjct: 1 MLRALAEAYPEAHCELDFNTPLELAVATILSAQCTDKRVNEVTPALFKRYPTAESYAGAD 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+L+ IR+ G YR K+ +++ L L+ ++P L+ L +LPGIGRK ANVIL
Sbjct: 61 RAELEEMIRSTGFYRNKASSLMGLGAQLVERHGGEVPARLDELVKLPGIGRKTANVILGN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AF +P I VDTH R+ R + P KVE ++ +IP K ++++ HGR VC
Sbjct: 121 AFDVPGITVDTHFGRLVRRWKWTAEEDPVKVEHAIGELIPRKEWTMLSHYVIFHGRRVCH 180
Query: 208 ARKPQCQSCIISNLCKRI 225
ARKP C +C+++ C
Sbjct: 181 ARKPACGACLLAADCPSY 198
>gi|219669081|ref|YP_002459516.1| endonuclease III [Desulfitobacterium hafniense DCB-2]
gi|219539341|gb|ACL21080.1| endonuclease III [Desulfitobacterium hafniense DCB-2]
Length = 208
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 127/200 (63%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ I + + +P EL + F L++A +LSAQ+TD VN+ T LF TP++ L
Sbjct: 4 VNSILSILAATYPEAHCELNFSTPFELLIATMLSAQATDKKVNQVTARLFRDYKTPEQFL 63
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +++ I+ +G+Y K++NI++ HIL+ + ++P ++E LT+LPG+GRK ANV+
Sbjct: 64 TMSLAEMEQAIKELGLYHNKAKNILATCHILVANYGGEVPGSMEALTQLPGVGRKTANVV 123
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
LS AF IP + VDTH+ R+SNR+GLA G P+ +E+ L+ IP AH+WL+ HGR
Sbjct: 124 LSNAFHIPAMAVDTHVLRVSNRLGLASGTNPDLIEKQLMSCIPCSQWIQAHHWLIWHGRR 183
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C AR P+C C +S LC
Sbjct: 184 ICAARNPKCPECPLSPLCPS 203
>gi|317010803|gb|ADU84550.1| endonuclease III [Helicobacter pylori SouthAfrica7]
Length = 216
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ C T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T L
Sbjct: 1 MSVKCAKTRQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
FE + + ++++ I+++ + KS+++I+++ ++ +F+ IP T + L L
Sbjct: 61 FEKYSSVNDLALASLEEVKEIIKSVSYFNNKSKHLINMAQKVVRDFNGVIPSTQKELMSL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G+K ANV+LS+ F + VDTH+FR ++R+GL+ KTP K E+ L +
Sbjct: 121 DGVGQKTANVVLSVCFDANYLAVDTHVFRATHRLGLSDAKTPIKTEEELSELF-KDDLSQ 179
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H+ L+L GRY+CKA+ P C +C ++ C
Sbjct: 180 LHHALILFGRYICKAKNPLCDACFLTEFC 208
>gi|332535298|ref|ZP_08411099.1| endonuclease III [Pseudoalteromonas haloplanktis ANT/505]
gi|332035283|gb|EGI71788.1| endonuclease III [Pseudoalteromonas haloplanktis ANT/505]
Length = 220
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 133/217 (61%), Gaps = 9/217 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P P EL Y + F L+VAV LSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNKDKRHQILSRLRDDNPHPVTELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L IG L++YI+TIG++ K+ N+ + IL++E ++ +P+ E L LPG+GRK
Sbjct: 61 PQAILDIGHDTLRDYIKTIGLFNSKAANVYKMCQILVDEHNSIVPENREALEALPGVGRK 120
Query: 140 GANV-------ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKH 190
ANV L G + VDTHI R++NR G A GKT + EQ++++ P +
Sbjct: 121 TANVVLNTAFGWLKDNEGRYFLAVDTHIQRLANRTGYAKGKTVEQTEQAIIKNTPNKKEF 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+N H+W +LHGRY C ARKP+C SCII +LC ++
Sbjct: 181 MFNLHHWFILHGRYTCTARKPKCGSCIIEDLCDYKEK 217
>gi|118467497|ref|YP_890407.1| endonuclease III [Mycobacterium smegmatis str. MC2 155]
gi|118168784|gb|ABK69680.1| endonuclease III [Mycobacterium smegmatis str. MC2 155]
Length = 259
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 111/231 (48%), Gaps = 7/231 (3%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPK-------ELEEIFYLFSLKWPSPKGELYYVNHFTLIVA 54
+S+ + + + + + + + +P EL + N L VA
Sbjct: 1 MSAGAARAAKPKKSDAKKWDSETHLGLVRRARRMNRTLAKAFPHVYCELDFTNPLELTVA 60
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
+LSAQSTD VN T LF+ T +L+ IR G YR K+ ++I L
Sbjct: 61 TILSAQSTDKRVNLTTPALFKKYRTALDYAQADRTELEELIRPTGFYRNKANSLIKLGQE 120
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
L+ FD ++P+TL+ L LPG+GRK ANVIL AF IP I VDTH R+ R +
Sbjct: 121 LVERFDGEVPKTLDELVTLPGVGRKTANVILGNAFDIPGITVDTHFGRLVRRWRWTDHED 180
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P KVE ++ +I + ++ HGR VC ARKP C C+++ C
Sbjct: 181 PVKVEFAVAELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 231
>gi|261839586|gb|ACX99351.1| endonuclease III [Helicobacter pylori 52]
Length = 216
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 3 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 63 KYPSVKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMNLDG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 123 VGQKTANVVLSVCFDANCIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 182 HALILFGRYTCKAKNPLCDACFLKEFC 208
>gi|210134786|ref|YP_002301225.1| endonuclease III [Helicobacter pylori P12]
gi|210132754|gb|ACJ07745.1| endonuclease III [Helicobacter pylori P12]
Length = 218
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 5 LKRAKTHQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ KTP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRATHRLGLSNAKTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCDACFLKEFC 210
>gi|207725275|ref|YP_002255671.1| endonuclease III protein [Ralstonia solanacearum MolK2]
gi|206590509|emb|CAQ37471.1| endonuclease III protein [Ralstonia solanacearum MolK2]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/203 (52%), Positives = 145/203 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +ADT
Sbjct: 1 MNPAKRHALFETLREHNPTPTTELEYTSPFELLIAVLLSAQATDVGVNKATRRLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKGKHILQTCRILLDQYGGQVPRDRTALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVCKARKP+C C I LC
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLC 203
>gi|170761508|ref|YP_001785537.1| endonuclease III [Clostridium botulinum A3 str. Loch Maree]
gi|169408497|gb|ACA56908.1| endonuclease III [Clostridium botulinum A3 str. Loch Maree]
Length = 213
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 127/208 (61%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L+ I+ IG+YR KS+NI+ L L +F++++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFESQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L ++IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQVIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|262067349|ref|ZP_06026961.1| endonuclease III [Fusobacterium periodonticum ATCC 33693]
gi|291378912|gb|EFE86430.1| endonuclease III [Fusobacterium periodonticum ATCC 33693]
Length = 216
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 131/209 (62%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILEELHKKFGEPKCALNFQTPFELLVAVILSAQCTDKRVNIVTEEMFKEVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IPQ ++ LT L G+GR
Sbjct: 61 TPEQFANMEIEEIENYIKSTGFFRNKAKNIKKCSQQLLEKYNGEIPQDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ RI+N IGL + P K+EQ L++I+P K ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRITNLIGLVKSEDPIKIEQELMKIVPKKSWIVFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGR C AR+PQC++C IS+ C K
Sbjct: 181 LILHGRATCIARRPQCKNCEISDCCNYGK 209
>gi|261343667|ref|ZP_05971312.1| endonuclease III [Providencia rustigianii DSM 4541]
gi|282568050|gb|EFB73585.1| endonuclease III [Providencia rustigianii DSM 4541]
Length = 213
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + EI P P EL + + F L+++VLLSAQ+TDV+VNKAT L+ IAD
Sbjct: 1 MNKTKRI-EILTRLRDDNPKPTTELAFNSPFELLISVLLSAQATDVSVNKATAKLYPIAD 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+KMLA+G ++ YI+TIG++ K+EN+ +LI + +++P+ E L LPG+GR
Sbjct: 60 TPEKMLALGVDGIKEYIKTIGLFNTKAENVYKTCKLLIEKHHSQVPENREALEALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL+++P + + + H+W
Sbjct: 120 KTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKDVVEVEEKLLKVVPAEFKVDCHHWF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|126736817|ref|ZP_01752552.1| endonuclease III [Roseobacter sp. SK209-2-6]
gi|126721402|gb|EBA18105.1| endonuclease III [Roseobacter sp. SK209-2-6]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/200 (53%), Positives = 148/200 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LFEIADTPQKML
Sbjct: 10 LREIFTRFQAAEPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFEIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + + ++I+TIG++R+K++N+ LS IL++++ ++P + L LPG+GRK ANV+
Sbjct: 70 DLGIEGVTDHIKTIGLFRQKAKNVAKLSQILVDDYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWKQPAQAVDTHIFRVGNRSGIAPGKDVDAVERAIEDHIPADFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKPQC +C+I +LC+
Sbjct: 190 HCKARKPQCGTCLIRDLCQF 209
>gi|297564229|ref|YP_003683202.1| endonuclease III [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296848678|gb|ADH70696.1| endonuclease III [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 248
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/200 (33%), Positives = 104/200 (52%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
++ +P EL + L+VA +LSAQ TD VN+ T LF + +
Sbjct: 31 MYRELIELYPDAHCELNFTTPLELLVATILSAQCTDKRVNQVTPALFARYPDAEGYASAR 90
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++L+ IR+ G +R K+ ++I L L ++P+ L L +LPG+GRK ANV+L
Sbjct: 91 REELEEMIRSTGFFRAKANSLIGLGQELCERHGGEVPRKLSDLVKLPGVGRKTANVLLGN 150
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AF +P I VDTH R+ R G + P KVE + + P + + ++ HGR VC
Sbjct: 151 AFDVPGITVDTHFGRLVRRFGWTDEEDPVKVEHEIGALFPRRDWTMLSHRVIWHGRRVCH 210
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
+RKP C +C ++ LC +
Sbjct: 211 SRKPACGACGLARLCPSFGE 230
>gi|319403566|emb|CBI77148.1| endonuclease III [Bartonella rochalimae ATCC BAA-1498]
Length = 246
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 108/223 (48%), Positives = 158/223 (70%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ K S + +Y E+ EIF FS++ P+P+ +L Y N FTL+VAV+LSAQ+
Sbjct: 1 MTEKVIKSLEVYKNTKTIYGEDEIAEIFRRFSVQRPTPRSDLNYTNVFTLLVAVVLSAQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD +VNK TK LF AD P+KM+ +G++ + +IR+IG++R K+ N+ +L LI+++
Sbjct: 61 TDASVNKVTKKLFCFADRPEKMITLGKEGIAQHIRSIGLWRAKAHNVYALCCRLIDQYGG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E L LPG+GRK ANV+L++AFG PT+ VDTHI R+ NR+GLA GKT +VE+
Sbjct: 121 QVPDNREALMTLPGVGRKTANVVLNIAFGQPTMAVDTHILRLGNRLGLASGKTSEEVEEK 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L++IIP + AH+WL+LHGRY+CKARK +C CII++LCK
Sbjct: 181 LVKIIPDCYLQYAHHWLILHGRYICKARKVECVQCIIADLCKA 223
>gi|317179051|dbj|BAJ56839.1| endonuclease III [Helicobacter pylori F30]
Length = 218
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEEVKEIIKSVSYSNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSDANTPIKTEEELSNLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|319898273|ref|YP_004158366.1| endonuclease III [Bartonella clarridgeiae 73]
gi|319402237|emb|CBI75770.1| endonuclease III [Bartonella clarridgeiae 73]
Length = 248
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 110/202 (54%), Positives = 156/202 (77%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+TD +VNK TK LF +AD P+K
Sbjct: 24 DEIAEIFRRFSIQRPTPKSDLSYTNVFTLLVAVVLSAQTTDASVNKVTKKLFCLADRPEK 83
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M+ +G++ + ++IR IG++R K++NI L LI+++D ++P + E L LPG+GRK AN
Sbjct: 84 MITLGKEGIAHHIRAIGLWRAKAQNIYELCCRLIDQYDGQVPDSREALMTLPGVGRKTAN 143
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L++AFG PT+ VDTHI R+ NR+GLA GKTP +VE+ L++IIP + +AH+WL+LHG
Sbjct: 144 VVLNIAFGQPTMAVDTHILRLGNRLGLASGKTPEEVEEKLVKIIPDCYLQHAHHWLILHG 203
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RY+CKARK +C CIIS+LCK
Sbjct: 204 RYICKARKVECTQCIISDLCKA 225
>gi|315446296|ref|YP_004079175.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Mycobacterium sp. Spyr1]
gi|315264599|gb|ADU01341.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Mycobacterium sp. Spyr1]
Length = 260
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ + + + + LG + + + +P EL + N L VA +LSAQST
Sbjct: 13 ARRSARKWDRETHLGLVR---RARRMNRTLAQAFPHVYCELDFTNPLELTVATILSAQST 69
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN T LF T + +L+ IR G YR K+ ++I L L FD +
Sbjct: 70 DKRVNLTTPALFAKYRTARDYATADRTELEELIRPTGFYRNKATSLIGLGQALEERFDGE 129
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+TL+ L LPGIGRK ANV+L AF IP I VDTH R+ R + P KVE +
Sbjct: 130 VPRTLDELVTLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWRWTAEEDPVKVEHIV 189
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+I + ++ HGR VC ARKP C C+++ C
Sbjct: 190 GDLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 232
>gi|262184108|ref|ZP_06043529.1| endonuclease III [Corynebacterium aurimucosum ATCC 700975]
Length = 219
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 119/212 (56%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
++P + I + ++P EL + + L+VA +LSAQ TD VN+ T
Sbjct: 6 SAPHDDATEAARIVHIRTALAEEYPDADCELDFTSPLELLVATVLSAQCTDARVNQVTPE 65
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF + A L+ +R +G R K+ +++ + L+ +FD ++PQ ++ LT
Sbjct: 66 LFAAYPSAPDYAAADRADLERILRPLGFQRAKAGHLLGIGEKLVADFDGQVPQGIDELTS 125
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK A V+ AFG+P I VDTH+ R+S R+GL KTP +E+ + + +P + Q
Sbjct: 126 LPGVGRKTALVVRGNAFGLPGITVDTHVTRLSQRLGLTGAKTPRAIERDVAKRVPEEEQT 185
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+LHGR VC ARKP+C +C+++ C
Sbjct: 186 VFSHRLILHGRRVCTARKPKCAACVLAPWCPS 217
>gi|121535154|ref|ZP_01666970.1| endonuclease III [Thermosinus carboxydivorans Nor1]
gi|121306263|gb|EAX47189.1| endonuclease III [Thermosinus carboxydivorans Nor1]
Length = 213
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/204 (45%), Positives = 131/204 (64%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T +++ + + + L Y F L++AV+LSAQ TD VN T LF +TP
Sbjct: 4 TKAVKQQMLAILAEHYRGATTALNYSTPFELLIAVILSAQCTDERVNIITARLFPQYNTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
K+L +G+ KL+ YIR G++R K+ NII+ IL ++ ++P E L +LPG+GRK
Sbjct: 64 AKILELGQNKLEEYIRDCGLFRSKARNIIATCEILCRDYGGEVPTRFEDLIKLPGVGRKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI+S FG P I VDTH+FR++NR GLA GKTP++VE L+R+IP + +AH+WL+
Sbjct: 124 ANVIVSQLFGTPAIAVDTHVFRVANRTGLAKGKTPHEVEDGLMRVIPRQDWASAHHWLIW 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VCKAR+P C C ++ LC
Sbjct: 184 HGRKVCKARQPACGVCPLNGLCPS 207
>gi|269957812|ref|YP_003327601.1| endonuclease III [Xylanimonas cellulosilytica DSM 15894]
gi|269306493|gb|ACZ32043.1| endonuclease III [Xylanimonas cellulosilytica DSM 15894]
Length = 259
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 105/198 (53%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I L + ++P K EL + L+VA +LSAQ+TDV VN T LF +
Sbjct: 42 IDRLLAERYPDAKAELDFTTPLELLVATVLSAQTTDVRVNATTPILFGRYPDAAAYASAD 101
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+L+ + +G +R K+ +I L L+ F ++P + L LPG+GRK ANV+L
Sbjct: 102 PAELEQILGPLGFFRAKARAVIGLGQALVERFGGEVPARMADLVTLPGVGRKTANVVLGN 161
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG+P I VDTH R++ R G P KVE + + P K + +V HGR +C
Sbjct: 162 AFGVPGITVDTHFGRLARRFGWTTSDDPVKVEHEVGGLFPRKDWTMLSHHVVWHGRRICH 221
Query: 208 ARKPQCQSCIISNLCKRI 225
A++P C +C +++LC
Sbjct: 222 AKRPACGACPVASLCPSY 239
>gi|333031324|ref|ZP_08459385.1| endonuclease III [Bacteroides coprosuis DSM 18011]
gi|332741921|gb|EGJ72403.1| endonuclease III [Bacteroides coprosuis DSM 18011]
Length = 218
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 131/208 (62%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F P + EL+Y N + L++AV+LSAQ TD VN T LF
Sbjct: 1 MTKKERYTNVINWFLENMPVAETELHYTNPYELLIAVILSAQCTDKRVNMVTPALFLDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + + YI++I K+++++ ++ +L+ +FD+ +P+ ++ LT+LPG+GR
Sbjct: 61 TPESLANTTPEVVFEYIKSISFPNNKAKHLVGMAKMLVEKFDSDVPEEMKDLTQLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR+SNRIGL KTP + E+ L++ IP ++ AH+W
Sbjct: 121 KTANVIRSVVYDKPAMAVDTHVFRVSNRIGLTNNSKTPLETEKELVKNIPSQYIATAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRYVC+ARKP+C+ C + CK
Sbjct: 181 LILHGRYVCQARKPKCEECGLKLYCKYF 208
>gi|218262453|ref|ZP_03476919.1| hypothetical protein PRABACTJOHN_02597 [Parabacteroides johnsonii
DSM 18315]
gi|218223383|gb|EEC96033.1| hypothetical protein PRABACTJOHN_02597 [Parabacteroides johnsonii
DSM 18315]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F+ P + EL+Y N + L++AV+LSAQ TD VN T LF
Sbjct: 1 MRKEERYKGVLNWFNENVPVAETELHYDNPYQLLIAVILSAQCTDKRVNMITPALFRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + YIR+I KS++++ ++ +L+++F +P ++ L +LPG+GR
Sbjct: 61 TPEVMAASTPEVIFEYIRSISYPNNKSKHLVGMAKMLMSDFGGVVPSDIDELQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVI S+ + P + VDTH+FR++NRIGL KTP + E+ L++ IP + AH+W
Sbjct: 121 KTANVIASVVYNKPAMAVDTHVFRVANRIGLTNNSKTPLETEKELVKHIPEEQIPIAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRY C ARKP+C+ C + CK
Sbjct: 181 LILHGRYTCIARKPKCEECGLKPWCKYF 208
>gi|170756278|ref|YP_001779840.1| endonuclease III [Clostridium botulinum B1 str. Okra]
gi|169121490|gb|ACA45326.1| endonuclease III [Clostridium botulinum B1 str. Okra]
Length = 213
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 124/208 (59%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEVTKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ L + ++L+ I+ IG+YR KS+NI+ L L +F +++P LT LPG+GRK
Sbjct: 61 SKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L + IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQAIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|307637272|gb|ADN79722.1| endonuclease III [Helicobacter pylori 908]
gi|325995863|gb|ADZ51268.1| Endonuclease III [Helicobacter pylori 2018]
gi|325997458|gb|ADZ49666.1| Endonuclease III [Helicobacter pylori 2017]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++I L +P+ EL + N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 1 MSLKRAKTKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++I+++ ++ +F IP T + L L G
Sbjct: 61 KYPSVNDLARASLEEVKEIIQSVSYFNNKSKHLINMAQKVVRDFKGVIPSTQKELMSLDG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ KTP K E+ L + + H
Sbjct: 121 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNAKTPIKTEEELSDLF-KDNLSKLH 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 180 HALILFGRYTCKAKNPLCDACFLKEFC 206
>gi|325279570|ref|YP_004252112.1| endonuclease III [Odoribacter splanchnicus DSM 20712]
gi|324311379|gb|ADY31932.1| endonuclease III [Odoribacter splanchnicus DSM 20712]
Length = 212
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + E + F+ K P + EL Y + F LIVAV+LSAQ TD VN T LFE
Sbjct: 1 MTTKERYEGVLGWFAGKMPVAESELKYNDPFELIVAVILSAQCTDKRVNMTTPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M A + + + I++I K++++ ++ L +F K+P+ +E L LPG+GR
Sbjct: 61 DAKAMAAGTVEDIYHLIKSISYPNNKAKHLHEMAQKLERDFQGKVPEDMELLQTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++++AF P + VDTH+FR+SNRIGL KTP + E+ L++ IP + AH+W
Sbjct: 121 KTANVVMAVAFHKPAMPVDTHVFRVSNRIGLVNNTKTPLETEKQLVKNIPAEILSTAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGRYVC ARKP+C+ C I C+ +
Sbjct: 181 LILHGRYVCLARKPKCEECGIRQWCRFFQ 209
>gi|86605614|ref|YP_474377.1| endonuclease III [Synechococcus sp. JA-3-3Ab]
gi|86554156|gb|ABC99114.1| endonuclease III [Synechococcus sp. JA-3-3Ab]
Length = 231
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI +P+ L+Y L+VA +LSAQ TD VN+ T LF Q
Sbjct: 8 RQRALEILIRLKRHYPNSTCALHYETPLQLLVATILSAQCTDERVNQVTPELFRRFPDAQ 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A ++++ IR G YR K+++I ++ +F ++P+T+ L LPG+ RK A
Sbjct: 68 ALAAAPREEIEALIRPTGFYRNKAKHIQEACRKIVTDFGGQVPRTMPELLTLPGVARKTA 127
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ AFGI + VDTH+ R+S R+GL + P ++E+ L++++P N L+
Sbjct: 128 NVVLAHAFGINAGVTVDTHVKRLSRRLGLTEHEDPVRIERDLMQLLPQADWENWSIRLIE 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR +C ARKP C+ C +++LC
Sbjct: 188 HGRAICTARKPLCEQCFLADLCPS 211
>gi|207743647|ref|YP_002260039.1| endonuclease III protein [Ralstonia solanacearum IPO1609]
gi|206595046|emb|CAQ61973.1| endonuclease III protein [Ralstonia solanacearum IPO1609]
Length = 214
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/203 (52%), Positives = 145/203 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +ADT
Sbjct: 1 MNPAKRHALFETLREHNPTPTTELEYTSPFELLIAVLLSAQATDVGVNKATRKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKGKHILQTCRILLDQYGGQVPRDRTALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVCKARKP+C C I LC
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLC 203
>gi|17545724|ref|NP_519126.1| endonuclease III protein [Ralstonia solanacearum GMI1000]
gi|17428018|emb|CAD14707.1| probable endonuclease III protein [Ralstonia solanacearum GMI1000]
Length = 214
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +ADT
Sbjct: 1 MNPAKRRALFETLREHNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKCKHILQTCRILLDQYGGQVPRDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC+ARKP+C C I LC+
Sbjct: 181 LHGRYVCRARKPECWHCAIEPLCEF 205
>gi|289422681|ref|ZP_06424521.1| endonuclease III [Peptostreptococcus anaerobius 653-L]
gi|289156860|gb|EFD05485.1| endonuclease III [Peptostreptococcus anaerobius 653-L]
Length = 226
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 127/210 (60%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T KE+ EI + + P EL + + F L+VA +LSAQ TDV VN T+ +F+
Sbjct: 1 MPRKKTKKEVVEILDMLTQMHPDAHCELVHTSAFELLVATILSAQCTDVRVNIVTEEMFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ P+ + K ++ I+T G+Y+ K++ I S I++++F ++P TLE L +LPG
Sbjct: 61 KYNKPEDFKDLSIKDIEAMIKTCGLYKSKAQKIKDTSTIIVDQFGGQVPDTLEDLVKLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK A V+LS AFG+P I VDTH+FR+SNRIGL E +L++ IP ++H
Sbjct: 121 VGRKTAGVVLSNAFGVPAIAVDTHVFRVSNRIGLVKENNVEATEFALMKAIPKDRWTHSH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ GR +CKARKP+C C I + C
Sbjct: 181 HLLIFQGRRICKARKPECHLCNIRDYCNYY 210
>gi|187777203|ref|ZP_02993676.1| hypothetical protein CLOSPO_00749 [Clostridium sporogenes ATCC
15579]
gi|187774131|gb|EDU37933.1| hypothetical protein CLOSPO_00749 [Clostridium sporogenes ATCC
15579]
Length = 213
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 127/208 (61%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILIDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEVTKVLFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L+ I+ IG+YR KS+NI+ L L +F++++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFESEVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L ++IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQVIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|289548031|ref|YP_003473019.1| endonuclease III [Thermocrinis albus DSM 14484]
gi|289181648|gb|ADC88892.1| endonuclease III [Thermocrinis albus DSM 14484]
Length = 205
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++EI +P+ K EL + N F L+VAV+LSAQ+TD VN+ T LFE TP+ +
Sbjct: 4 VKEIIERLEKVFPN-KLELNFSNPFQLLVAVILSAQTTDAKVNQITPKLFERFPTPKDLA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++++ YIR++ YR K++ + S IL+ ++ ++P+T++ L LPGIGRK A++I
Sbjct: 63 EAPLEEIEEYIRSVNYYRNKAKFLKEASRILVEKYGGEVPKTIDELVALPGIGRKSASMI 122
Query: 145 LSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
L A+GI I VDTH+ R+S R+GL P K+E+ L++I P + L+L GR
Sbjct: 123 LYNAYGINEGIAVDTHVARVSQRLGLTSHTDPQKIEKDLMQITPKEDWGKLSNLLILLGR 182
Query: 204 YVCKARKPQCQSCIISNLCKR 224
YVC A+ PQ C++ ++C
Sbjct: 183 YVCTAKNPQHHKCVLRDICPS 203
>gi|323142347|ref|ZP_08077179.1| endonuclease III [Phascolarctobacterium sp. YIT 12067]
gi|322413231|gb|EFY04118.1| endonuclease III [Phascolarctobacterium sp. YIT 12067]
Length = 211
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 129/208 (62%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E I + K L Y + F L+VAV+LSAQ TD VN T +F +T
Sbjct: 1 MRKAQREAILAKLEETYKGSKTALNYNSPFELLVAVILSAQCTDERVNVITARMFPRLNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM A+ +++++ IR G+Y K++N++ + H+L F++ IP ++ L LPG+G+K
Sbjct: 61 PEKMGALTQEEMEAEIRDCGLYHAKAKNLLGMCHMLTQRFNSVIPNDIKTLMELPGVGQK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVI S+ + IP + VDTH+FR+S+R+GLA GK P E+ L +IIP + +AH+W +
Sbjct: 121 TANVIASIIYNIPALAVDTHVFRVSHRLGLAQGKDPLATEKELEKIIPREKWSDAHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +CKARKP C+ C++ C ++
Sbjct: 181 WHGRKICKARKPLCRGCVVVEECPFKEK 208
>gi|332305731|ref|YP_004433582.1| endonuclease III [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173060|gb|AEE22314.1| endonuclease III [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 210
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 140/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E+ + P P EL + + F L++AVLLSAQ+TDV+VNKA +F +A+T
Sbjct: 1 MNQQKRIEMLTRWRAANPHPTTELNFTSPFELLIAVLLSAQATDVSVNKAMAKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G ++ +I+TIG++ K+ N+ +LI++ ++ +P+ L LPG+GRK
Sbjct: 61 PETVYALGVDGVKEFIKTIGLFNTKAVNVNKTCKMLIDKHNSVVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI R+SNR A GKT KVE+ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIDRVSNRTKFAMGKTVEKVEEKLLKVVPAEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|148378212|ref|YP_001252753.1| endonuclease III [Clostridium botulinum A str. ATCC 3502]
gi|153932971|ref|YP_001382613.1| endonuclease III [Clostridium botulinum A str. ATCC 19397]
gi|153937471|ref|YP_001386165.1| endonuclease III [Clostridium botulinum A str. Hall]
gi|226947430|ref|YP_002802521.1| endonuclease III [Clostridium botulinum A2 str. Kyoto]
gi|148287696|emb|CAL81761.1| endonuclease III [Clostridium botulinum A str. ATCC 3502]
gi|152929015|gb|ABS34515.1| endonuclease III [Clostridium botulinum A str. ATCC 19397]
gi|152933385|gb|ABS38884.1| endonuclease III [Clostridium botulinum A str. Hall]
gi|226844451|gb|ACO87117.1| endonuclease III [Clostridium botulinum A2 str. Kyoto]
gi|322804477|emb|CBZ02027.1| endonuclease III [Clostridium botulinum H04402 065]
Length = 213
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 125/208 (60%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + + +P EL + N F L++A +LSAQ+TD VN+ TK LF+ T
Sbjct: 1 MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ L + ++L+ I+ IG+YR KS+NI+ L L +F +++P LT LPG+GRK
Sbjct: 61 PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF +PTI VDTH+FR+SNRIGL K E+ L + IP + H+ L+
Sbjct: 121 TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQAIPKELWILMHHVLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP+C+ C I CK +
Sbjct: 181 FHGRRCCVARKPKCEECTIKKYCKYYNE 208
>gi|299066970|emb|CBJ38165.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Ralstonia
solanacearum CMR15]
Length = 214
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/205 (51%), Positives = 145/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y F L++AVLLSAQ+TDV VNKAT+ L+ +ADT
Sbjct: 1 MNPAKRRALFETLREHNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKCKHILQTCRILLDQYGGQVPRDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEEFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC+ARKP+C C I LC+
Sbjct: 181 LHGRYVCRARKPECWHCAIEPLCEF 205
>gi|296328749|ref|ZP_06871263.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154084|gb|EFG94888.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 214
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++++I K+ +PK L + F L+VAV+LSAQ TD VN T+ +F+ +
Sbjct: 1 MTKKEKVKKILVELEKKFGTPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ + ++++NYI++ G +R K++NI S L+ +++ +IPQ ++ LT L G+GR
Sbjct: 61 TPEQFANMELEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPQDMDKLTELAGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ +G I VDTH+ R++N IGL + P K+E L++I+P K ++
Sbjct: 121 KTANVVRGEVWGLADGITVDTHVKRLTNLIGLVDSEDPVKIELELMKIVPKKSWIVFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
L+LHGR C AR+P+C C IS C IK+
Sbjct: 181 LILHGRATCIARRPRCLECEISKYCNYGIKK 211
>gi|261838172|gb|ACX97938.1| endonuclease III [Helicobacter pylori 51]
gi|332673618|gb|AEE70435.1| endonuclease III [Helicobacter pylori 83]
Length = 218
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRTKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSDANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|93005679|ref|YP_580116.1| endonuclease III [Psychrobacter cryohalolentis K5]
gi|92393357|gb|ABE74632.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Psychrobacter cryohalolentis K5]
Length = 231
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 141/219 (64%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
SK ++P +++ F + P EL Y ++F L++AV+LSAQ+TD
Sbjct: 2 SKTVKHKTADTPPSRRMPNRDVRPFFEKLAATIDEPVTELNYKSNFELLIAVILSAQATD 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V+VN AT L+ +A+TP+ +LA+GE+ L++YI+ IG++ K++N+I LI +F++ +
Sbjct: 62 VSVNIATNQLYPVANTPEAILALGEEGLKSYIKNIGLFNAKAKNVIKTCRDLIEKFNSTV 121
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P + L L G+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK VE+ L+
Sbjct: 122 PDNRKDLESLAGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLATGKNVLIVEKKLV 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
IP +AH++L+LHGRY C+AR P+C +C + + C
Sbjct: 182 ERIPDDFIVDAHHYLILHGRYTCQARTPKCGACPVYDEC 220
>gi|194289252|ref|YP_002005159.1| endonuclease iii; DNA glycosylase/apyrimidinic (ap) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Cupriavidus
taiwanensis LMG 19424]
gi|193223087|emb|CAQ69092.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Cupriavidus
taiwanensis LMG 19424]
Length = 214
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +A T
Sbjct: 1 MNAAKCRAIFETLREVNPAPATELEYSSPFELLIAVLLSAQATDVGVNKATRRLFPVAHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++ML +GE L YI+TIG+Y+ K++++I IL+ K+P E L LPG+GRK
Sbjct: 61 PRQMLELGEAGLSEYIKTIGLYKTKAKHVIETCRILVERHGGKVPAQREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR GLAPGK + VEQ LL+ +P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVSNRTGLAPGKNVDIVEQKLLKCVPHEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKARKP+C C I LC+ ++
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEFREK 208
>gi|94968981|ref|YP_591029.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Candidatus Koribacter versatilis Ellin345]
gi|94551031|gb|ABF40955.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Candidatus Koribacter versatilis Ellin345]
Length = 278
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P+ ++EI +P K L++ N + L+VA +LSAQ TDV VN T LF TPQ
Sbjct: 59 PERVQEILKRLEATYPGVKCALHHHNAWELLVATILSAQCTDVRVNMVTPELFRKYPTPQ 118
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++L+ IR+ G +R K+++I+ + +++N+F ++P ++ L +PG RK A
Sbjct: 119 AFAGLKPEQLEPDIRSTGFFRNKAKSIVGAAKVIVNDFGGEVPNEMDKLLTVPGAARKTA 178
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L FGI + VDTH+ RIS R+ L P +EQ L++I+P N + ++
Sbjct: 179 NVVLGSWFGIAAGVVVDTHVHRISRRLELTKNNDPKTIEQDLMKILPRDRWINFSHEIIH 238
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
HGR +C ARKP+C C + N+C
Sbjct: 239 HGRAICIARKPKCVDCSLENIC 260
>gi|84685264|ref|ZP_01013163.1| endonuclease III [Maritimibacter alkaliphilus HTCC2654]
gi|84666996|gb|EAQ13467.1| endonuclease III [Rhodobacterales bacterium HTCC2654]
Length = 210
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 146/203 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ E+F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTP KML
Sbjct: 6 IREVFRRLHEAEPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRELFKIADTPAKML 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE L +I+TIG++R+K++N+I LS IL++ + ++P + L LPG+GRK ANV+
Sbjct: 66 ALGEAGLTEHIKTIGLFRQKAKNVIKLSQILVDHYGGEVPNSRAALQLLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK VE+++ +P +Q +AH+WL+LHGRY
Sbjct: 126 LNMWWHYPAQAVDTHIFRVGNRTGICPGKDVVAVERAIEDNVPADYQQHAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
CKARKP C +C+I +LC+ ++
Sbjct: 186 TCKARKPLCGTCLIRDLCQFEEK 208
>gi|208434504|ref|YP_002266170.1| endonuclease III [Helicobacter pylori G27]
gi|208432433|gb|ACI27304.1| endonuclease III [Helicobacter pylori G27]
Length = 218
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L C T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 5 LKCAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ KTP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRATHRLGLSNAKTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|183985132|ref|YP_001853423.1| endonuclease III Nth [Mycobacterium marinum M]
gi|183178458|gb|ACC43568.1| endonuclease III Nth [Mycobacterium marinum M]
Length = 260
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPK-------ELEEIFYLFSLKWPSPKGELYYVNHFTLIV 53
M K + L ++ + + + +P EL + + L V
Sbjct: 1 MSGGSKPTANASTPKLPKRWSEETRTALVRRARRMNRKLAQAFPHVYCELDFTSPLELAV 60
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
A +LSAQSTD VN T LF T +L+N IR G YR K+ ++I L
Sbjct: 61 ATILSAQSTDKRVNLTTPDLFVKYQTALDYAQADRAELENLIRPTGFYRNKANSLIGLGQ 120
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
L+ FD ++P T+E L LPG+GRK ANVIL AF +P I VDTH R++ R +
Sbjct: 121 ALVERFDGQVPATMEELVTLPGVGRKTANVILGNAFDVPGITVDTHFGRLARRWRWTAEE 180
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P KVE ++ +I K + ++ HGR VC ARKP C C+++ C
Sbjct: 181 DPVKVEHAVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 232
>gi|302874216|ref|YP_003842849.1| endonuclease III [Clostridium cellulovorans 743B]
gi|307689520|ref|ZP_07631966.1| endonuclease III [Clostridium cellulovorans 743B]
gi|302577073|gb|ADL51085.1| endonuclease III [Clostridium cellulovorans 743B]
Length = 217
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 145/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + + S +P+ K EL + + + L++A ++SAQSTDV VN T+ LFE T
Sbjct: 9 MDKEKSKIVIDKLSEMYPNAKCELNFHSAYELLIATMMSAQSTDVRVNIITEDLFENYYT 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++M+ + E++LQ I++ G+Y+ K++NI++ S ILI +++ ++P+++E LT LPG+G+K
Sbjct: 69 PEQMVTLSEEELQEKIKSCGLYKSKAKNILATSRILIEKYNGQVPKSIEELTTLPGVGKK 128
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+ S FGIP I VDTH+FR++NRIG+A GKTP KVE+ L+ IP + ++H++L+
Sbjct: 129 TANVVASNVFGIPAIAVDTHVFRVANRIGIAEGKTPEKVEEQLMEAIPKEKWSDSHHYLI 188
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR +CKARKP+C+ C + C +
Sbjct: 189 WHGRRICKARKPECEVCNLKYECNYYNK 216
>gi|325675283|ref|ZP_08154968.1| endonuclease III [Rhodococcus equi ATCC 33707]
gi|325553989|gb|EGD23666.1| endonuclease III [Rhodococcus equi ATCC 33707]
Length = 226
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 102/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+P EL + L VA +LSAQ TDV VN+ T LF +
Sbjct: 3 RRLKDAFPHVYCELDFTTPLELTVATILSAQCTDVRVNQVTPALFARYPDARAYAEADRV 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L+ YIR+ G YR K+ +II L L+ +D ++P L+ L LPGIGRK ANV+L AF
Sbjct: 63 ELEEYIRSTGFYRNKATSIIGLGQALLERYDGEVPNKLKDLVTLPGIGRKTANVVLGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
G+P I VDTH R+ R P KVE ++ +I K + + ++ HGR VC AR
Sbjct: 123 GVPGITVDTHFGRLVRRWKWTEETDPVKVEHAVGALIERKEWTDLSHRVIFHGRRVCHAR 182
Query: 210 KPQCQSCIISNLCKRI 225
KP C C+++ C
Sbjct: 183 KPACGVCVLAKDCPSY 198
>gi|109899278|ref|YP_662533.1| endonuclease III [Pseudoalteromonas atlantica T6c]
gi|109701559|gb|ABG41479.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudoalteromonas
atlantica T6c]
Length = 210
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E+ + P P EL + + F L++AVLLSAQ+TDV+VNKA +F +A+T
Sbjct: 1 MNQQKRVEMLTRWRDANPHPTTELNFTSPFELLIAVLLSAQATDVSVNKAMAKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G ++ +I+TIG++ K+ N+I +LI + ++ +P+ L LPG+GRK
Sbjct: 61 PEAVYALGVDGVKEFIKTIGLFNTKAVNVIKTCKMLIEQHNSVVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHI+R+SNR LA GKT + VEQ LL+++P + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEQKLLKVVPTEFKVDVHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SCII +LC+ +
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEFKDK 208
>gi|317123642|ref|YP_004097754.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Intrasporangium calvum DSM 43043]
gi|315587730|gb|ADU47027.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Intrasporangium calvum DSM 43043]
Length = 244
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
S ++ SP+ + ++ ++P EL + L+VA +LSAQ+TD
Sbjct: 5 SARAVVTADESPVA---RTRRARAMYRALHDRYPYAHCELDFTTPLELLVATILSAQTTD 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V VNK T +F T A +L+ I+ G +R KS+++I L L+ FD ++
Sbjct: 62 VGVNKVTPIVFAKYRTAADYAAADRTELETIIQPTGFFRAKSDSLIKLGQALVERFDGEV 121
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P L+ L LPG+GRK ANV+L AF +P I VDTH R+ R G + P KVE ++
Sbjct: 122 PGRLKDLVTLPGVGRKTANVVLGNAFNVPGITVDTHFGRLVRRFGWTAEEDPVKVEHAVG 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + + ++ HGR C A+KP C +C ++ C
Sbjct: 182 ALFLRRDWTMLSHVVIFHGRRTCHAKKPACGACPVARWCPSY 223
>gi|300704664|ref|YP_003746267.1| endonuclease III [Ralstonia solanacearum CFBP2957]
gi|299072328|emb|CBJ43662.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil [Ralstonia
solanacearum CFBP2957]
Length = 214
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 107/205 (52%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P + +F P+P EL Y + F L++AVLLSAQ+TDV VNKAT+ LF +ADT
Sbjct: 1 MNPAKRHALFETLREHNPTPTTELEYTSPFELLIAVLLSAQATDVGVNKATRKLFPVADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P KMLA+GE+ L YI+TIG+YR K ++I+ IL+++ ++P+ L LPG+GRK
Sbjct: 61 PAKMLALGEEGLTAYIKTIGLYRTKGKHILQTCRILLDQHGGQVPRDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + +AH+WL+
Sbjct: 121 TANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEAFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|75907952|ref|YP_322248.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Anabaena variabilis ATCC 29413]
gi|75701677|gb|ABA21353.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Anabaena variabilis ATCC 29413]
Length = 223
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ + E+ +P L Y L+VA +LSAQ TD VN T
Sbjct: 2 STTTRKSPSKKQRALEVLSRLKRLYPDATCSLNYTTTVQLLVATILSAQCTDERVNLVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF + +L+N +R+ G YR K++NI + ++++E+++ +P T+E L
Sbjct: 62 ALFSRFPDAPSLANADLTELENLVRSTGFYRNKAKNIQAACRMIVSEYNSVVPNTMEQLL 121
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+ RK ANV+L+ A+GI + VDTH+ R+S R+GL P +EQ L++++P
Sbjct: 122 KLPGVARKTANVVLAHAYGINAGVTVDTHVKRLSQRLGLTKYPDPVHIEQDLMKLLPQPD 181
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
N L+ HGR VCKAR P C++C +++LC + +
Sbjct: 182 WENWSIRLIYHGRAVCKARSPVCEACELADLCPSVTK 218
>gi|332982475|ref|YP_004463916.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Mahella australiensis 50-1 BON]
gi|332700153|gb|AEE97094.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Mahella australiensis 50-1 BON]
Length = 213
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 128/207 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T ++E I + + +P K L Y N F L++A +LSAQSTD VNK T LF
Sbjct: 1 MKTRDDIEHILDILADCYPQAKTALVYSNAFELLIATILSAQSTDKQVNKVTGKLFGKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ A+ + L+ I++ G+YR K+ NII++S IL+ + +++P + L +LPG+GR
Sbjct: 61 TPEDFAALEPQTLEEEIKSCGLYRTKALNIINMSKILVERYGSQVPSDPDELQKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV++S AFG P I VDTH+FR+++R+GLA TP E+ L+ IP AH+W
Sbjct: 121 KTANVVVSNAFGRPAIAVDTHVFRVTHRLGLAKSSTPLGTEKELMACIPRVLWSQAHHWF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ HGR VC+AR+P+C C + C
Sbjct: 181 IYHGRNVCRARQPKCDECRLRQYCDFY 207
>gi|254488195|ref|ZP_05101400.1| endonuclease III [Roseobacter sp. GAI101]
gi|214045064|gb|EEB85702.1| endonuclease III [Roseobacter sp. GAI101]
Length = 214
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 144/200 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL + N +TL+VAV LSAQ+TD VNKATK LFE+ +TPQ+ML
Sbjct: 10 IREIFTRFHAVDPEPKGELDHTNVYTLLVAVALSAQATDSGVNKATKSLFEVVETPQQML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + L +I+TIG++R+K++N+I LS IL+++++ +P + L LPG+GRK ANV+
Sbjct: 70 DLGLEGLIEHIKTIGLFRQKAKNVIKLSQILVDDYEGVVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR + PGKT + VE+++ IP Q +AH+W++LHGRY
Sbjct: 130 LNMWWHYPAQAVDTHIFRVGNRTNICPGKTVDAVERAIEDNIPVDFQQHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C++CII +LC
Sbjct: 190 HCKARKPLCRTCIIRDLCPY 209
>gi|83745736|ref|ZP_00942793.1| Endonuclease III [Ralstonia solanacearum UW551]
gi|83727426|gb|EAP74547.1| Endonuclease III [Ralstonia solanacearum UW551]
Length = 531
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 109/218 (50%), Positives = 150/218 (68%), Gaps = 1/218 (0%)
Query: 6 KSDSYQGNSPLGCL-YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
++ + SP P + +F P+P EL Y + F L++AVLLSAQ+TDV
Sbjct: 303 QALTRPSPSPHHRPSMNPAKRHALFETLREHNPTPTTELEYTSPFELLIAVLLSAQATDV 362
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VNKAT+ LF +ADTP KMLA+GE+ L YI+TIG+YR K ++I+ IL++++ ++P
Sbjct: 363 GVNKATRKLFPVADTPAKMLALGEEGLTAYIKTIGLYRTKGKHILQTCRILLDQYGGQVP 422
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
+ L LPG+GRK ANV+L+ AFG PTI VDTHIFR++NR GLAPGK +VE LL+
Sbjct: 423 RDRTALEALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLK 482
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++P + + +AH+WL+LHGRYVCKARKP+C C I LC
Sbjct: 483 VVPEEFRQDAHHWLILHGRYVCKARKPECWHCAIEPLC 520
>gi|15673053|ref|NP_267227.1| endonuclease III [Lactococcus lactis subsp. lactis Il1403]
gi|12724026|gb|AAK05169.1|AE006340_2 endonuclease III [Lactococcus lactis subsp. lactis Il1403]
Length = 218
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K E + +P GEL + F L++A +LSAQ+TD VNKAT LF
Sbjct: 1 MLSKKRYLEALEIIEDMFPQAHGELEWETPFQLLIATILSAQATDKGVNKATPALFATFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---NKIPQTLEGLTRLPG 135
Q M ++++ IRTIG+Y+ K++NI+ S +L+ +F +P+ + L LPG
Sbjct: 61 DAQTMSQAKVEEIEKLIRTIGLYKTKAKNILRTSQMLVTDFGDLLPDLPKDKKVLQTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L+ A+GIP I VDTH+ R+S R+ + P K T +VE+ L+++IP + A
Sbjct: 121 VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVPQKATVLEVEEKLMKLIPQEKWVQA 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY C A+KP+C C + + CK K+
Sbjct: 181 HHHLIFFGRYHCTAKKPKCADCPVLDYCKFGKK 213
>gi|269139043|ref|YP_003295744.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase
[Edwardsiella tarda EIB202]
gi|267984704|gb|ACY84533.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase
[Edwardsiella tarda EIB202]
gi|304558975|gb|ADM41639.1| Endonuclease III [Edwardsiella tarda FL6-60]
Length = 213
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 139/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL Y + F L++AVLLSAQ+TDV+VNKAT LF A+T
Sbjct: 1 MNQAKRIEILRRLRDANPQPTTELIYGSPFELLIAVLLSAQATDVSVNKATATLFPAANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ +I+TIG+Y K+ENII IL+ + ++P+ + L LPG+GRK
Sbjct: 61 PAALLALGVDGVKRHIKTIGLYNGKAENIIKTCRILLEQHGGEVPEDRQALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR A GKT N+VE+ LL+++P + N H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTRFALGKTVNEVEEKLLKVVPAEFALNCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C AR+P+C SC+I +LC+ +
Sbjct: 181 LHGRYTCIARRPRCGSCLIEDLCEFRDK 208
>gi|329893766|ref|ZP_08269854.1| Endonuclease III [gamma proteobacterium IMCC3088]
gi|328923489|gb|EGG30803.1| Endonuclease III [gamma proteobacterium IMCC3088]
Length = 220
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 118/207 (57%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L P ++ IF +P P L + + +TL++AVLLSAQ TD VN T LF
Sbjct: 1 MANLGKPARVKLIFETLQRLYPEPPVPLDHKDPYTLLIAVLLSAQCTDERVNTVTPSLFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
ADTP++M+ + ++++ IR G+ +KS+ I LS +L+ + ++PQ+ + L LPG
Sbjct: 61 KADTPEQMVTLSVEEIREIIRPCGLSPQKSKAIHRLSELLLEQHGGQVPQSFDALEELPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G K A V+++ AFG+P VDTHI R++ R GL+ G+ + E+ L R+ P + H
Sbjct: 121 VGHKTAGVVMAQAFGVPAFPVDTHIHRLAQRWGLSRGRNVTETERDLKRLFPRDYWNKLH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ +GR C AR + C + C
Sbjct: 181 LQIIFYGREYCTARGCDGRVCPLCRAC 207
>gi|116622883|ref|YP_825039.1| DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
[Candidatus Solibacter usitatus Ellin6076]
gi|116226045|gb|ABJ84754.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Candidatus Solibacter usitatus Ellin6076]
Length = 219
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
P + + EI +P L + N + L+VA +LSAQ TD VN T
Sbjct: 2 KRPKTAAERKERIAEILLTLDRMYPEATCALIHTNPWELLVATILSAQCTDKRVNMVTPE 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF TPQ A+ + L N IR+ G + K+++I+ + + EF K+P+T++ L
Sbjct: 62 LFRKYPTPQDFAAVAPEVLANDIRSTGFFNNKAKSIVGAARRVTQEFGGKVPRTIQELLT 121
Query: 133 LPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PG RK ANV+L A+GI + I VDTH+ RI+ R+ L P K+EQ L++IIP
Sbjct: 122 IPGAARKTANVVLGTAYGIASGIVVDTHVSRIAQRLDLTKETDPVKIEQDLVKIIPQDRW 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++LHGR +C AR P C C ++ LC
Sbjct: 182 IRFSHQIILHGRALCIARNPLCDKCDLNPLC 212
>gi|71281819|ref|YP_268918.1| endonuclease III [Colwellia psychrerythraea 34H]
gi|71147559|gb|AAZ28032.1| endonuclease III [Colwellia psychrerythraea 34H]
Length = 220
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 135/217 (62%), Gaps = 9/217 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ E+ + P P EL + + F L++AVLLSAQSTDV VNKAT L+ +A+T
Sbjct: 1 MNKEKRIEMLTRLRDENPEPTTELNFSSPFELLIAVLLSAQSTDVGVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L++YI+TIG++ K++N I +L++ ++P+ L LPG+GRK
Sbjct: 61 PQAILDLGLDGLKSYIKTIGLFNTKAQNTIKTCQMLVDLHGGEVPENRAALEALPGVGRK 120
Query: 140 GANV-------ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KH 190
ANV L G + VDTHI+R++NR APGKT ++VE +++++ P +
Sbjct: 121 TANVVLNTAFGWLKDNEGNYFLAVDTHIYRLANRTKYAPGKTVDQVEANIIKLTPKKTEF 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+N H+W +LHGRY C A+KP+C SCII +LC+ +
Sbjct: 181 MFNLHHWFILHGRYTCTAKKPKCGSCIIEDLCEFKDK 217
>gi|186684162|ref|YP_001867358.1| endonuclease III [Nostoc punctiforme PCC 73102]
gi|186466614|gb|ACC82415.1| endonuclease III [Nostoc punctiforme PCC 73102]
Length = 229
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ L K EI +P L Y L+VA +LSAQ TD VNK T L
Sbjct: 10 TTRKSLSKKKRSLEILARLKRLYPDATCSLNYSTPVQLLVATILSAQCTDERVNKVTPAL 69
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F Q + +L++ +R+ G YR K++NI + +++ EF++ +P +E L +L
Sbjct: 70 FGKFPDAQSLAIADLVELESLVRSTGFYRNKAKNIQAACRMIVTEFNSVVPNQMEQLLKL 129
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+ RK ANV+L+ A+GI + VDTH+ R+ R+GL K P ++EQ L+ ++P
Sbjct: 130 PGVARKTANVVLAHAYGINAGVTVDTHVKRLCQRLGLTEAKDPVRIEQDLMGLLPQSDWE 189
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
N L+ HGR +CKAR P C +C +++LC
Sbjct: 190 NWSIRLIYHGRAICKARSPVCVACELADLCP 220
>gi|319794008|ref|YP_004155648.1| endonuclease iii [Variovorax paradoxus EPS]
gi|315596471|gb|ADU37537.1| endonuclease III [Variovorax paradoxus EPS]
Length = 215
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 142/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ F P+P+ EL Y F L+ AVLLSAQ+TDV VNKAT+ L+ +A+T
Sbjct: 1 MKKDNISLFFATLQAANPTPETELEYDTPFELLAAVLLSAQATDVGVNKATRKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG+YR K++++I +L+ ++P+T L LPG+GRK
Sbjct: 61 PQAILDLGVEGLESYIKTIGLYRSKAKHLIEACRMLVELHGGEVPRTRAELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR GLA GKTP +VE L + +PP+++ +AH+WL+
Sbjct: 121 TANVVLNVAFGEPTMAVDTHIFRVSNRTGLARGKTPLEVELKLEKRVPPEYRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+C ARKP+C C ++ C
Sbjct: 181 LHGRYICVARKPRCWECAVAPYCDY 205
>gi|269793831|ref|YP_003313286.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Sanguibacter keddieii DSM 10542]
gi|269096016|gb|ACZ20452.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Sanguibacter keddieii DSM 10542]
Length = 238
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+S++ P+ + + L + +P + EL + L+VA +LSAQ
Sbjct: 1 MSTRAGARPAERPPVALVRRARRTN---RLLADVYPDARCELDFTTPLELLVATVLSAQC 57
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN+ T LFE Q + L++ IR+ G +R K+ ++ + L+
Sbjct: 58 TDKRVNQVTPALFERFPDAQAYAEADPEVLEDMIRSTGFFRPKARSLAGIGAALVERHGG 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P +L+ L LPG+GRK ANV+L AFG+P I VDTH+ R+ R G + P VE+
Sbjct: 118 EVPGSLDELVALPGVGRKTANVVLGDAFGVPGITVDTHVGRLVRRWGWTTSEDPVVVERE 177
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ + ++ HGR VC AR+P C +C ++ LC
Sbjct: 178 IGALVERSEWTLLSHRVIFHGRRVCFARRPACGACPVAGLCPS 220
>gi|319902841|ref|YP_004162569.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Bacteroides helcogenes P 36-108]
gi|319417872|gb|ADV44983.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Bacteroides helcogenes P 36-108]
Length = 224
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I F P + EL+Y N F L++AV+LSAQ TD VN T ++
Sbjct: 1 MRKKERYERIIAWFRENRPVAETELHYDNPFELLIAVILSAQCTDKRVNMITPAIYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATESEVIYEYIRSVSYPNNKAKHLVGMARMLVKDFNSQVPDTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+AF + VDTH+FR+S+R+GL K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVAFNKAAMAVDTHVFRVSHRLGLVSDKCTTPFSVEKELVKYIPEADISIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRY C+AR PQC C + LCK
Sbjct: 181 WLILHGRYTCQARTPQCDECGLQLLCKYY 209
>gi|147669462|ref|YP_001214280.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Dehalococcoides sp. BAV1]
gi|146270410|gb|ABQ17402.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Dehalococcoides sp. BAV1]
Length = 218
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+ EI S+ + K L + F ++VA +LSAQSTD +NK T LF+ P+
Sbjct: 7 EKQALEIIKRLSVVYHDAKTALNFTTPFEMLVATILSAQSTDKMINKITPALFKKYPDPK 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+L+ I++ G + K+ NII + +++ F +P + + LPG+GRK A
Sbjct: 67 AFAEASLAELEQDIKSSGFFHNKAANIIGAARGVVSRFGGVVPSGMTDMLTLPGVGRKTA 126
Query: 142 NVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L AFG + I VDTH+ R++ R+GL P K+EQ L+ ++P + + Y+L+
Sbjct: 127 NVVLHNAFGLVEGIAVDTHVKRLTERLGLTSNTDPVKIEQDLMALLPRTYWGDFSYYLID 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC A+KP C C++ ++C
Sbjct: 187 HGRAVCDAKKPHCPECVLKDICPS 210
>gi|145221965|ref|YP_001132643.1| endonuclease III [Mycobacterium gilvum PYR-GCK]
gi|145214451|gb|ABP43855.1| endonuclease III [Mycobacterium gilvum PYR-GCK]
Length = 260
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ + + + + LG + + + +P EL + N L VA +LSAQST
Sbjct: 13 ARRSARKWDRETHLGLVR---RARRMNRTLTQAFPHVYCELDFTNPLELTVATILSAQST 69
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN T LF T + +L+ IR G YR K+ ++I L L FD +
Sbjct: 70 DKRVNLTTPALFAKYRTARDYATADRTELEELIRPTGFYRNKATSLIGLGQALEERFDGE 129
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+TL+ L LPGIGRK ANV+L AF IP I VDTH R+ R + P KVE +
Sbjct: 130 VPRTLDELVTLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWRWTAEEDPVKVEHIV 189
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+I + ++ HGR VC ARKP C C+++ C
Sbjct: 190 GDLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 232
>gi|291288604|ref|YP_003505420.1| endonuclease III [Denitrovibrio acetiphilus DSM 12809]
gi|290885764|gb|ADD69464.1| endonuclease III [Denitrovibrio acetiphilus DSM 12809]
Length = 210
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 110/207 (53%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E K+P L Y F L+ A +LSAQ TD VN TK LF
Sbjct: 1 MTKQERAEAFEKYLEEKYPVVVCSLNYQTPFQLLTATILSAQCTDARVNIVTKDLFAAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + + + I++ G+Y+ KS+NII ++ L+ ++PQ ++ L L G+GR
Sbjct: 61 DPFSLADADIEDVAKIIKSTGMYKMKSKNIIGMAKALVENHGGEVPQDMDELLALSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+ + P + VDTH+ RIS R+GL TP KVE+ L ++I + Q + + +
Sbjct: 121 KTANVVRGNFWQKPGVVVDTHVKRISGRVGLTDNTTPEKVEKDLEKLIKGEKQCDWCHRV 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ GR +C AR P+C C +S++CK
Sbjct: 181 IYFGREICTARSPKCGICGVSHVCKYY 207
>gi|237756075|ref|ZP_04584653.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691768|gb|EEP60798.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 209
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
E+ +P PK EL Y N F L++A++LSAQ+TD VN+ + LF+ TPQ +
Sbjct: 6 HELIERLKKHFPDPKIELNYENEFQLLIAIILSAQTTDKKVNQVSPILFKKYPTPQALAN 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
K L+ I+ +G YR+K++ I + ++ +F+ +IP+TLE L LPG+GRK A+ L
Sbjct: 66 ADLKDLEEIIKPLGYYRRKAKLIKECAKAIVEKFNGQIPKTLEELISLPGVGRKTASAFL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
A+ IP I VDTH+ R++ R+ + P KVE+ L + ++ LVL GRY+
Sbjct: 126 VNAYKIPAIVVDTHVKRVAKRLKITNQTNPEKVEKDLAKFFSKENWAYISNALVLFGRYI 185
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C A KP+C+ C +S++C K+
Sbjct: 186 CTANKPKCKECYVSDICPYEKK 207
>gi|293400780|ref|ZP_06644925.1| endonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305806|gb|EFE47050.1| endonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 215
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/202 (44%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EI + L++P+ EL + N F L+VAV+LSAQ+TD VNK T LFE TP+ + +
Sbjct: 4 DEILDILELRFPNAHCELVHQNPFELLVAVVLSAQTTDAAVNKITPALFEAFPTPEALAS 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
K+++ IR IG+YR K+ +I +LS L+ FD ++PQ+++ LT L G+GRK ANV+
Sbjct: 64 ANSKEVEAKIRRIGLYRNKARSIQALSASLVEHFDGQVPQSMKELTSLAGVGRKTANVVR 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+ F IP I VDTH+ RI+ R+GLA G + VEQ L R I + AH+ + GRY
Sbjct: 124 SVCFDIPAIAVDTHVERIAKRLGLAKVGDSVEVVEQKLKRKIKRERWNRAHHLFIFFGRY 183
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
C AR PQC C ++ CK+ K
Sbjct: 184 QCTARNPQCDQCPFASFCKKDK 205
>gi|284164375|ref|YP_003402654.1| endonuclease III [Haloterrigena turkmenica DSM 5511]
gi|284014030|gb|ADB59981.1| endonuclease III [Haloterrigena turkmenica DSM 5511]
Length = 227
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ E+ +P L Y N L++AV+LSAQ TD VN+ TKHLFE D
Sbjct: 8 RTEQAAEVVDRLEEAYPDSTISLRYSNRLELLIAVILSAQCTDERVNEETKHLFEKYDGA 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ E++L + +I Y K+ I S ++ E ++P T++ LT L G+GRK
Sbjct: 68 EDYANAPEEELAEDLNSITYYNSKAGYIKSSCRTILEEHGGEVPDTMDELTELSGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ R+S R+GL K P +EQ L+ I+P + + +
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTEEKRPEAIEQDLMEIVPDGYWQQFTHLCI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C AR P C C+++++C K
Sbjct: 188 DHGRATCTARNPDCGDCVLADICPSEK 214
>gi|313159740|gb|EFR59097.1| endonuclease III [Alistipes sp. HGB5]
Length = 217
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + + + FS P + EL+Y + + L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MTTKQRYDGVIAWFSEHMPVAESELHYTDPYQLLVAVILSAQCTDKRVNMTTPALFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A + + YI++I K+ N+ ++ +L +EF ++P L+ + RLPG+GR
Sbjct: 61 TPFDMAAATAEDIYPYIKSISYPNNKARNLAGMARMLCSEFGGEVPSDLQQMQRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ ++ + + VDTH+FR+SNRIGL KTP + E +L + IPP AH+W
Sbjct: 121 KTANVLGAVLWQKEVMPVDTHVFRVSNRIGLTTNSKTPLQTELTLEKNIPPHLLPVAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRYVC AR P+C C I+ C++
Sbjct: 181 LILHGRYVCTARAPKCGECGIAVWCRKY 208
>gi|281491571|ref|YP_003353551.1| endonuclease III [Lactococcus lactis subsp. lactis KF147]
gi|281375289|gb|ADA64802.1| Endonuclease III [Lactococcus lactis subsp. lactis KF147]
Length = 218
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K E + +P GEL + F L++A +LSAQ+TD VNKAT LF
Sbjct: 1 MLSKKRYLEALEIIEDMFPQAHGELEWETPFQLLIATILSAQATDKGVNKATPALFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---NKIPQTLEGLTRLPG 135
Q M ++++ IRTIG+Y+ K++NI+ S +L+ +F +P+ + L LPG
Sbjct: 61 DAQTMSQAKVEEIEKLIRTIGLYKTKAKNILRTSQMLVTDFGDLLPDLPKDKKVLQTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L+ A+GIP I VDTH+ R+S R+ + P K T +VE+ L+++IP + A
Sbjct: 121 VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVPQKATVLEVEEKLMKLIPQEKWVQA 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY C A+KP+C C + + CK K+
Sbjct: 181 HHHLIFFGRYHCTAKKPKCADCPVLDYCKFGKK 213
>gi|325298553|ref|YP_004258470.1| endonuclease III [Bacteroides salanitronis DSM 18170]
gi|324318106|gb|ADY35997.1| endonuclease III [Bacteroides salanitronis DSM 18170]
Length = 214
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F P + EL+Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MRKKELYDRVIAYFEQAMPVAETELHYEDPFQLLVAVILSAQCTDKRVNMITPALFRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M A + YIR++ K+++++ ++ +L+ +++ ++P TLE L +LPG+GR
Sbjct: 61 TAEAMAATTPDVVYEYIRSVSYPNNKAKHLVGMAQMLVRDYEGQVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL PG P E+ L R IP AH+
Sbjct: 121 KTANVIQSVVFHKAAMAVDTHVFRVSHRIGLVPGTCTTPLATEKHLTRYIPEALIPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRYVC AR P+C C ++ +C+
Sbjct: 181 WLILHGRYVCTARNPKCDKCGLNGICQA 208
>gi|83944249|ref|ZP_00956704.1| endonuclease III [Sulfitobacter sp. EE-36]
gi|83953290|ref|ZP_00962012.1| endonuclease III [Sulfitobacter sp. NAS-14.1]
gi|83842258|gb|EAP81426.1| endonuclease III [Sulfitobacter sp. NAS-14.1]
gi|83844793|gb|EAP82675.1| endonuclease III [Sulfitobacter sp. EE-36]
Length = 214
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 102/203 (50%), Positives = 146/203 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F PKGEL + N +TL+VAV LSAQ+TD VNKATK LFEI + PQ+ML
Sbjct: 10 IREIFTRFQDAEAEPKGELDHTNVYTLLVAVALSAQATDAGVNKATKSLFEIVEHPQQML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + L +I+TIG++R+K++N++ LS IL++++D +P + L LPG+GRK ANV+
Sbjct: 70 DLGLEGLTEHIKTIGLFRQKAKNVMKLSQILVDDYDGVVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR +APGKT + VE+++ IP Q++AH+W++LHGRY
Sbjct: 130 LNMWWHYPAQAVDTHIFRVGNRTRIAPGKTVDAVERAIEDNIPVDFQHHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
CKARKP C++CII +LC ++
Sbjct: 190 HCKARKPLCRTCIIRDLCPYEEK 212
>gi|319763913|ref|YP_004127850.1| endonuclease iii [Alicycliphilus denitrificans BC]
gi|330823823|ref|YP_004387126.1| endonuclease III [Alicycliphilus denitrificans K601]
gi|317118474|gb|ADV00963.1| endonuclease III [Alicycliphilus denitrificans BC]
gi|329309195|gb|AEB83610.1| endonuclease III [Alicycliphilus denitrificans K601]
Length = 212
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 142/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++E F P P EL Y + F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKTEDIEPFFAALKAANPQPNTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFLVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + L+ YI+TIG+YR K+ +++ HIL+ ++P+T E L LPG+GRK
Sbjct: 61 PQAMLDLGLEGLEGYIKTIGLYRSKARHLMQTCHILVERHGGQVPRTREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG T+ VDTHIFR+ NR GLAPG+ P +VE+ LL +P ++ +AH+WL+
Sbjct: 121 TANVVLNVAFGEATMAVDTHIFRVGNRTGLAPGRNPLEVEKRLLERVPQQYMVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
L GRYVC+ARKP+C C+++ C
Sbjct: 181 LLGRYVCQARKPRCWECVVAPYC 203
>gi|227541567|ref|ZP_03971616.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182665|gb|EEI63637.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 205
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 115/198 (58%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I + + P EL Y F L VA +LSAQ TDV VNK T LF M
Sbjct: 6 INARLAAEHPDAHCELNYDTPFQLAVATILSAQCTDVRVNKVTPGLFAAYPDAAAMAGAD 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+++ IR+ G +R K++NI+++++ ++ E+ ++P+TL+ L LPG+GRK ANVIL
Sbjct: 66 IHHVEDLIRSTGFFRNKAKNIVAMANTVMEEYGGEMPRTLDELVALPGVGRKTANVILGN 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG+P + VDTH R+ R+G+ VE+ ++ ++ P + L+ HGR VC
Sbjct: 126 AFGVPGLTVDTHFLRLMRRLGITTSTNAVTVEKQVMPLLDPAEWTMFSHRLIFHGRRVCT 185
Query: 208 ARKPQCQSCIISNLCKRI 225
AR P C+ C+++++C ++
Sbjct: 186 ARSPHCEECVLADICPKV 203
>gi|330470528|ref|YP_004408271.1| endonuclease III [Verrucosispora maris AB-18-032]
gi|328813499|gb|AEB47671.1| endonuclease III [Verrucosispora maris AB-18-032]
Length = 259
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 100/194 (51%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ P EL + + L VA +LSAQ TD VN+ T LF ++
Sbjct: 23 LTETHPDAHCELNHTSPLELAVATILSAQCTDKKVNEVTPKLFARYPRAADYAGADRAEM 82
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G YR K+ ++I L L+ +D ++P L L LPGIGRK ANVIL AF +
Sbjct: 83 EELIRPTGFYRNKTNSLIQLGQALVQRYDGQVPGRLADLVTLPGIGRKTANVILGNAFDV 142
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ +R GL P K+E ++ + P + + ++ HGR VC ARKP
Sbjct: 143 PGITVDTHFQRLVHRWGLTSETDPVKIEHAIGAMFPKRDWTMLSHRIIFHGRRVCHARKP 202
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 203 ACGACTLTKLCPSY 216
>gi|217979411|ref|YP_002363558.1| endonuclease III [Methylocella silvestris BL2]
gi|217504787|gb|ACK52196.1| endonuclease III [Methylocella silvestris BL2]
Length = 240
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 148/199 (74%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ IF F P P+GEL Y+N +TL+VAV LSAQ+TDV VNKATK LF + D+PQKM
Sbjct: 33 RIAAIFARFEAASPHPEGELDYINPYTLLVAVTLSAQATDVGVNKATKALFALVDSPQKM 92
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
LA+GE +L+ IRTIG+YR K+++II S L+ F ++P L LPG+GRK ANV
Sbjct: 93 LALGEDRLREMIRTIGLYRTKAKHIIEASRQLVERFGGEVPHDRAALETLPGVGRKTANV 152
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
++++AFG TI VDTHIFR+SNRI LA GKTP +VE L R+IP ++ +AH+WL+LHGR
Sbjct: 153 VMNIAFGAATIAVDTHIFRVSNRIPLAKGKTPLEVELGLERVIPDVYKRHAHHWLILHGR 212
Query: 204 YVCKARKPQCQSCIISNLC 222
YVCKAR+P+C C+I++LC
Sbjct: 213 YVCKARRPECWRCLIADLC 231
>gi|163737117|ref|ZP_02144535.1| endonuclease III [Phaeobacter gallaeciensis BS107]
gi|161389721|gb|EDQ14072.1| endonuclease III [Phaeobacter gallaeciensis BS107]
Length = 214
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 109/200 (54%), Positives = 146/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VN+AT LF+IADTPQKML
Sbjct: 10 LREIFTRFQAADPEPKGELDHVNVYTLVVAVALSAQATDAGVNRATHALFQIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L +I+TIG+YR+K++N+I +S IL+ ++D +P + L LPG+GRK ANV+
Sbjct: 70 DLGEEGLIEHIKTIGLYRQKAKNVIKMSRILVEDYDGIVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRQPAQAVDTHIFRVGNRAGIAPGKDVDAVERAVEDNIPADFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +CII +LC+
Sbjct: 190 HCKARKPMCPTCIIRDLCQF 209
>gi|188527568|ref|YP_001910255.1| endonuclease III (nth) [Helicobacter pylori Shi470]
gi|188143808|gb|ACD48225.1| endonuclease III (nth) [Helicobacter pylori Shi470]
Length = 218
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRAKTYQKAQQIKKLLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEEVKETIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|313673731|ref|YP_004051842.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940487|gb|ADR19679.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 210
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 114/209 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + ++P K EL + N + L ++ +LSAQ TD VNK T LF+
Sbjct: 1 MEKTPIVNKFLEFLDGRFPDAKCELTHKNLYELAISTILSAQCTDEMVNKITPSLFQQYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + L+ I+ G Y K+++I+SL+ +++ + ++P +E L +LPGIGR
Sbjct: 61 DFFSLSNADIEHLKQIIKPTGFYNNKAKSILSLAKVVVENYKGELPLEMEILVKLPGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVILS I VDTH+ R+S R+GL P K+E+ L+ +IP + +
Sbjct: 121 KTANVILSEYGTPSGIVVDTHVARVSKRLGLTTYDDPIKIEKDLISLIPEDRWGKISHQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GR +CKARKP+C +C + + C KQ
Sbjct: 181 IHFGRQICKARKPECSNCEMRDFCSYYKQ 209
>gi|320538841|ref|ZP_08038517.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Serratia symbiotica str. Tucson]
gi|320031001|gb|EFW13004.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[Serratia symbiotica str. Tucson]
Length = 213
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 136/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL Y F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKLKRLEILTRLRDNNPHPTTELVYTTPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +LA+G ++ YI+TIG++ K+EN+I L+ ++P+ L LPG+GRK
Sbjct: 61 PAALLALGVDGVKAYIKTIGLFNSKAENMIKTCRRLLELHGGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK + VE+ LL+++ + + + H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKNVDLVEEKLLKVVAAEFKVDCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCVARKPRCGSCVIEDLCEFKEK 208
>gi|307729065|ref|YP_003906289.1| endonuclease III [Burkholderia sp. CCGE1003]
gi|307583600|gb|ADN56998.1| endonuclease III [Burkholderia sp. CCGE1003]
Length = 214
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 102/205 (49%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AVLLSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSINPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +GE+ + NYI+TIG+YR K++N+I+ IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PQAVLELGEEGVANYIKTIGLYRNKAKNVIATCRILLDQYGGEVPENREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +++AH+WL+
Sbjct: 121 TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFKHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|2506195|sp|P46303|UVEN_MICLC RecName: Full=Ultraviolet N-glycosylase/AP lyase; AltName:
Full=Pyrimidine dimer glycosylase; AltName:
Full=UV-endonuclease; Contains: RecName: Full=UV
endonuclease 32 kDa isoform; Contains: RecName: Full=UV
endonuclease 31 kDa isoform
Length = 279
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ ++ + + G + L + + ++ I + +P EL + F L+VA +LSAQ+
Sbjct: 1 METESTGTPTGETRLALVRRARRIDRI---LAETYPYAVAELDFETPFELLVATVLSAQT 57
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN AT LF M A E +LQ +R+ G YR K+ I+ LS L+ D
Sbjct: 58 TDVRVNAATPALFARFPDAHAMAAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDG 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L LPG+GRK A V+L AFG P I VDTH R++ R+G P K
Sbjct: 118 EVPARLEDLVALPGVGRKTAFVVLGNAFGQPGITVDTHFGRLARRLGFTDETDPGKGRAR 177
Query: 182 LLRIIPPKH-QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R +PP + L+ HGR VC AR+P C C I+ C
Sbjct: 178 RGRPVPPARDWTMLSHRLIFHGRRVCHARRPACGRCPIARWCPSY 222
>gi|726273|gb|AAA86508.1| ultraviolet N-glycosylase/AP lyase [Micrococcus luteus]
Length = 268
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ ++ + + G + L + + ++ I + +P EL + F L+VA +LSAQ+
Sbjct: 1 METESTGTPTGETRLALVRRARRIDRI---LAETYPYAVAELDFETPFELLVATVLSAQT 57
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN AT LF M A E +LQ +R+ G YR K+ I+ LS L+ D
Sbjct: 58 TDVRVNAATPALFARFPDAHAMAAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDG 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P LE L LPG+GRK A V+L AFG P I VDTH R++ R+G P K
Sbjct: 118 EVPARLEDLVALPGVGRKTAFVVLGNAFGQPGITVDTHFGRLARRLGFTDETDPGKGRAR 177
Query: 182 LLRIIPPKH-QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R +PP + L+ HGR VC AR+P C C I+ C
Sbjct: 178 RGRPVPPARDWTMLSHRLIFHGRRVCHARRPACGRCPIARWCPSY 222
>gi|330994167|ref|ZP_08318095.1| Endonuclease III [Gluconacetobacter sp. SXCC-1]
gi|329758634|gb|EGG75150.1| Endonuclease III [Gluconacetobacter sp. SXCC-1]
Length = 232
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 139/216 (64%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ P T E+ + P + EL +V+ +TL+VAV+LSAQ+TD +VN+
Sbjct: 4 PARPAKPARRAMTLAEVRTFITQLAAANPDARSELDFVDDYTLLVAVVLSAQATDASVNR 63
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF A TP+ M+ +GE+K+ +IRTIG++R K+ N++SLS L+ FD ++P
Sbjct: 64 ATVGLFRDAPTPKAMVELGEEKVGEHIRTIGLWRTKAHNVVSLSRQLLERFDGRVPYDRA 123
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+GRK ANV++++AFG T+ VDTHIFRI NR GLAPG + VE L+R IP
Sbjct: 124 ALESLPGVGRKTANVVMNVAFGDSTMAVDTHIFRIGNRTGLAPGASVRAVEDQLVRRIPA 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH+WL+LHGRYVCKAR+P+C C + C+
Sbjct: 184 DMLRPAHHWLILHGRYVCKARRPECWRCPAFDPCQY 219
>gi|86160029|ref|YP_466814.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85776540|gb|ABC83377.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 226
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 111/216 (51%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
S + EI P + L + + L+V+V+LSAQSTD VNK
Sbjct: 2 SPRPRPRAPTAQARARAAEIVDRLDASMPEARIALAFQDDLQLLVSVILSAQSTDAGVNK 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
AT LF A ++L YIR++G++R K++ I++ + E ++P+T E
Sbjct: 62 ATPALFARYPDAAAYAAAQPEELWPYIRSLGLFRNKAKAIVAAMDAIAREHGGRVPRTRE 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
GL LPG+GRK A V+L VDTH+ R+S R+GL + P++VE+ L+ ++P
Sbjct: 122 GLEALPGVGRKTAGVVLVHLGAAEAFPVDTHVGRVSRRLGLTREQDPDRVERDLMALLPE 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H V HGR C AR P C C++++LC +
Sbjct: 182 ARWGRGHQLFVWHGRRTCAARAPACSRCVVADLCPK 217
>gi|326406622|gb|ADZ63693.1| endonuclease III [Lactococcus lactis subsp. lactis CV56]
Length = 218
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K E + +P GEL + F L++A +LSAQ+TD VNKAT LF
Sbjct: 1 MLSKKRYLEALEIIEDMFPQAHGELEWETPFQLLIATILSAQATDKGVNKATPALFATFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---NKIPQTLEGLTRLPG 135
Q M ++++ IRTIG+Y+ K++NI+ S +L+ +F +P+ + L LPG
Sbjct: 61 DAQTMSQAKVEEIEKLIRTIGLYKTKAKNILRTSQMLVTDFGDLLPDLPKDKKVLQTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L+ A+GIP I VDTH+ R+S R+ + P K T +VE+ L+++IP K A
Sbjct: 121 VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVPQKATVLEVEEKLMKLIPQKKWVQA 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY C A+KP+C C + + CK K+
Sbjct: 181 HHHLIFFGRYHCTAKKPKCADCPVLDYCKFGKK 213
>gi|227487266|ref|ZP_03917582.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227092924|gb|EEI28236.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 205
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 116/198 (58%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I + + P EL Y F L VA +LSAQ TDV VNK T LF M
Sbjct: 6 INARLAAEHPDAHCELNYDTPFQLAVATILSAQCTDVRVNKVTPGLFAAYPDAAAMAGAD 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+++ IR+ G +R K++NI+++++ ++ E+ ++P+TL+ L LPG+GRK ANVIL
Sbjct: 66 IHHVEDLIRSTGFFRNKAKNIVAMANAVMEEYGGEMPRTLDELVALPGVGRKTANVILGN 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG+P + VDTH+ R+ R+G+ VE+ ++ ++ P + L+ HGR VC
Sbjct: 126 AFGVPGLTVDTHVLRLMRRLGITTSTNAVTVEKQVMPLLDPAEWTMFSHRLIFHGRRVCT 185
Query: 208 ARKPQCQSCIISNLCKRI 225
AR P C+ C+++++C ++
Sbjct: 186 ARSPHCEECVLADICPKV 203
>gi|208779428|ref|ZP_03246774.1| endonuclease III [Francisella novicida FTG]
gi|208745228|gb|EDZ91526.1| endonuclease III [Francisella novicida FTG]
Length = 212
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAGYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPKCRNCIIYDYCEFKDK 208
>gi|121601750|ref|YP_989564.1| endonuclease III [Bartonella bacilliformis KC583]
gi|120613927|gb|ABM44528.1| endonuclease III [Bartonella bacilliformis KC583]
Length = 252
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 112/205 (54%), Positives = 154/205 (75%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
Y E+ EIF FS++ P+P+ +L Y N FTL++AV+LSAQ+TD VNK T+ LF +AD
Sbjct: 24 YREDEIAEIFRRFSIQRPTPESDLTYTNVFTLLIAVVLSAQATDAGVNKVTQKLFRLADR 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KM+A+GE+ + ++IR IG++R K+ NI +L +LI+++ +P E L LPG+GRK
Sbjct: 84 PEKMVALGEEGIAHHIRAIGLWRAKARNIYALCCLLIDQYGGHVPDNREALMALPGVGRK 143
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL++AF PTI VDTHIFR+ NR+GLAPGKTP VE+ L++IIP + AH+WL+
Sbjct: 144 TANVILNVAFSQPTIAVDTHIFRLGNRLGLAPGKTPEMVEEKLVKIIPSYYMRYAHHWLI 203
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+CKARK QC CII++LCK
Sbjct: 204 LHGRYICKARKAQCTQCIIADLCKA 228
>gi|157370474|ref|YP_001478463.1| endonuclease III [Serratia proteamaculans 568]
gi|157322238|gb|ABV41335.1| endonuclease III [Serratia proteamaculans 568]
Length = 213
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P P EL Y F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKQKRLEILTRLRDNDPHPTTELVYTTPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P MLA+G ++ YI+TIG++ K+EN+I +L+ ++P+ L LPG+GRK
Sbjct: 61 PAAMLALGVDGVKGYIKTIGLFNSKAENVIKTCRMLLELHAGEVPEDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR APGK + VE+ LL+++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVDLVEEKLLKVVPAEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCMIEDLCEFKEK 208
>gi|294085170|ref|YP_003551930.1| putative endoIII-like endonuclease [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664745|gb|ADE39846.1| Predicted EndoIII-related endonuclease [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 214
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 104/203 (51%), Positives = 143/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ F S + P P+ EL + + FTL+VAV+LSAQ+TDV VNKATK LF A+T
Sbjct: 5 MRLDDMARCFERLSKRQPDPQTELEFSDPFTLLVAVVLSAQATDVGVNKATKGLFAAANT 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +M+A+G + +IRTIG++ K++N+ LS +LI + ++P+ L LPG+GRK
Sbjct: 65 PDQMVALGVAGISYHIRTIGLFNTKAKNVFRLSELLITRHNGRVPEDRAALEALPGVGRK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+SNR +APGKT + VE+ LLR +P + AH+WL+
Sbjct: 125 TANVVLNEAFGYPTIAVDTHIFRVSNRTRMAPGKTVDIVEKELLRRVPETWKKGAHHWLI 184
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVCKARKP C +C I++LC
Sbjct: 185 LHGRYVCKARKPDCAACEIADLC 207
>gi|254476525|ref|ZP_05089911.1| endonuclease III [Ruegeria sp. R11]
gi|214030768|gb|EEB71603.1| endonuclease III [Ruegeria sp. R11]
Length = 214
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 148/200 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VN+AT+ LF+IADTPQKML
Sbjct: 10 LREIFTRFQDADPEPKGELEHVNVYTLVVAVALSAQATDAGVNRATRELFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L +I+TIG+YR K++N+I LS IL++++ ++P + L LPG+GRK ANV+
Sbjct: 70 DLGEEGLIEHIKTIGLYRNKAKNVIKLSRILVDQYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRQPAQAVDTHIFRVGNRSGIAPGKDVDAVERAIEDNIPADFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKPQC +CII +LC+
Sbjct: 190 HCKARKPQCPTCIIRDLCQF 209
>gi|296537039|ref|ZP_06899028.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis
ATCC 49957]
gi|296262634|gb|EFH09270.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis
ATCC 49957]
Length = 217
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 101/205 (49%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + P+P+ EL+Y + +TL+VAV LSAQ+TDV+VNKAT LF +ADT
Sbjct: 1 MSAAQAALFVRSLAQANPAPETELHYTSPYTLLVAVALSAQATDVSVNKATATLFPLADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KMLA+GE+ + +IR IG+++ K++N+I+LS +LI ++P L LPG+GRK
Sbjct: 61 PEKMLALGEEGVGEHIRRIGLWKSKAKNVIALSRLLIERHGGQVPADRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG + VDTHIFR+ NR GLAPGKTP VE +L+R +PP+ +AH+WL+
Sbjct: 121 TANVVLNVAFGEEAMAVDTHIFRLGNRTGLAPGKTPRAVEDALMRRVPPELLRDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR P+C C+ C
Sbjct: 181 LHGRYVCKARAPECWRCVAREHCNY 205
>gi|315497802|ref|YP_004086606.1| endonuclease iii [Asticcacaulis excentricus CB 48]
gi|315415814|gb|ADU12455.1| endonuclease III [Asticcacaulis excentricus CB 48]
Length = 212
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 139/208 (66%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++++F F P+PK EL + N FTL+VAV LSAQ+TDV VNKAT LF +AD
Sbjct: 1 MRSAAAVKKLFERFEADKPAPKTELNFSNPFTLVVAVALSAQTTDVAVNKATGPLFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ ML +GE+ L I +IG+YR K++N++ + ILIN FD ++P L LPG+G
Sbjct: 61 TPQAMLDLGEETLMQMISSIGLYRNKAKNVMEMCRILINRFDGQVPLNRTDLLSLPGVGN 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K A+V+L+ P I VDTH++R+S+R+GL TP+KVE L+ IP K AH+
Sbjct: 121 KTASVVLNELDIEPAIAVDTHVYRVSHRLGLVNDSATTPDKVEAQLMASIPRKWLTRAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRY C AR P+C +C++ +LC +
Sbjct: 181 WLILHGRYTCTARSPKCMACLVEDLCPK 208
>gi|258650967|ref|YP_003200123.1| endonuclease III [Nakamurella multipartita DSM 44233]
gi|258554192|gb|ACV77134.1| endonuclease III [Nakamurella multipartita DSM 44233]
Length = 284
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 3 SSKKSDS-YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
S++K+ S + +P L + ++ +L +P EL + L VA +LSAQS
Sbjct: 30 SARKAPSGRRAKAPATPLARTRRARQLAGQLALGYPDAHCELDFTTPLELAVATILSAQS 89
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN T LF + + +L+ I++ G +R K+ ++I L L+ FD
Sbjct: 90 TDARVNLVTPALFARYRSAADYASASRSELEELIKSTGFFRNKTSSLIGLGQALVERFDG 149
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P TL L LPG GRK ANV+L AFG+P I VDTH+ R+ R GL P K+E
Sbjct: 150 ELPSTLADLVTLPGFGRKTANVVLGHAFGVPGITVDTHMARLVTRWGLTTQTDPVKIEAE 209
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L +P + HGR VC A+KP C +C ++ LC
Sbjct: 210 LNEQLPRAQWTAFSDRTIFHGRRVCHAKKPACGACFLAPLCPAY 253
>gi|328757063|gb|EGF70679.1| endonuclease III [Propionibacterium acnes HL025PA2]
Length = 245
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 105/203 (51%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL Y + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 23 ANEVRALLAKAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 83 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVV 142
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 143 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 202
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 203 RCHSRRPACGVCPVAEWCPSFGE 225
>gi|296130925|ref|YP_003638175.1| endonuclease III [Cellulomonas flavigena DSM 20109]
gi|296022740|gb|ADG75976.1| endonuclease III [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+PL + + L + ++P + EL + L+VA +LSAQ+TDV VN T
Sbjct: 3 ETPLAL---TRRARRVDRLLAARYPDARCELDFRTPLELLVATVLSAQTTDVRVNATTPE 59
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+ + L+ + +G YR K+ ++ + L+ F ++P+ LE L
Sbjct: 60 LFDRWPDAAALAGADLADLEEVLHPVGFYRAKARSVAGIGAALVERFGGEVPRRLEDLVT 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L AFG+P I VDTH+ R+S R+G P +E L ++ +
Sbjct: 120 LPGVGRKTANVVLGNAFGVPGITVDTHVQRLSQRLGWTTSTDPVVIEAELGALLERREWT 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
A + L+ HGR C AR+P C +C ++ LC
Sbjct: 180 MASHRLIFHGRRTCFARRPACGACPVAALCPS 211
>gi|332184205|gb|AEE26459.1| Endonuclease III [Francisella cf. novicida 3523]
Length = 212
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 158/209 (75%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L+VAV+LSAQ+TDV+VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLVAVILSAQATDVSVNKATKILFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ S LI +FD+K+P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNLIATSKDLIEKFDSKVPDNFDELISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ +AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLQDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPKCRNCIIYDYCEFKDK 208
>gi|126698144|ref|YP_001087041.1| endonuclease III [Clostridium difficile 630]
gi|260682265|ref|YP_003213550.1| endonuclease iii [Clostridium difficile CD196]
gi|260685864|ref|YP_003216997.1| endonuclease iii [Clostridium difficile R20291]
gi|115249581|emb|CAJ67398.1| Endonuclease III [Clostridium difficile]
gi|260208428|emb|CBA60983.1| endonuclease iii [Clostridium difficile CD196]
gi|260211880|emb|CBE02318.1| endonuclease iii [Clostridium difficile R20291]
Length = 201
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 118/196 (60%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+P K EL Y F L++A +LSAQ TDV VNK T LF+ +T + + +++
Sbjct: 1 MEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTARDFANLSIEEI 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
I++ G+Y+ KS+ I S L +D ++P +LE L +LPG+GRK A V+LS AF
Sbjct: 61 SKEIKSCGLYKSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKTAGVVLSNAFNH 120
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH+FR+SNRIG+ P K E +L+ IP + ++H+ L+ HGR +CKAR P
Sbjct: 121 PAIAVDTHVFRVSNRIGIVDEPNPQKTEFALMEAIPKERWSHSHHVLIFHGRRMCKARNP 180
Query: 212 QCQSCIISNLCKRIKQ 227
+C SC I C K+
Sbjct: 181 ECASCPIKEDCNYYKE 196
>gi|332678333|gb|AEE87462.1| Endonuclease III [Francisella cf. novicida Fx1]
Length = 212
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ +FG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTSFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPKCRNCIIYDYCEFKDK 208
>gi|254372990|ref|ZP_04988479.1| hypothetical protein FTCG_00563 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570717|gb|EDN36371.1| hypothetical protein FTCG_00563 [Francisella novicida GA99-3549]
Length = 212
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCRDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPKCRNCIIYDYCEFKDK 208
>gi|83591493|ref|YP_425245.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rhodospirillum rubrum ATCC 11170]
gi|83574407|gb|ABC20958.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rhodospirillum rubrum ATCC 11170]
Length = 237
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 110/199 (55%), Positives = 148/199 (74%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++E F + P PKGEL Y+N FTL+VAV+LSAQ+TD VN+AT LF++ADTP KM
Sbjct: 30 DVERFFATLAALSPEPKGELEYLNPFTLLVAVVLSAQATDKGVNRATGPLFQVADTPAKM 89
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+A+GE+ L+ YIRTIG++ K+ N+I+LS LI+E ++P L LPG+GRK ANV
Sbjct: 90 VALGEEALRGYIRTIGLFNTKARNVIALSQALIDEHGGEVPCDRAALETLPGVGRKTANV 149
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L++AFG PT+ VDTHIFR++NR GLAPGKTP VE L +IP ++ +AH+WL+LHGR
Sbjct: 150 VLNIAFGQPTMAVDTHIFRVANRTGLAPGKTPLAVEIGLEAVIPEGYRLHAHHWLILHGR 209
Query: 204 YVCKARKPQCQSCIISNLC 222
YVCKARKP+C C + + C
Sbjct: 210 YVCKARKPECPLCPVRDCC 228
>gi|313901141|ref|ZP_07834629.1| endonuclease III [Clostridium sp. HGF2]
gi|312954099|gb|EFR35779.1| endonuclease III [Clostridium sp. HGF2]
Length = 215
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 121/202 (59%), Gaps = 1/202 (0%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EI + +P EL + N F L+VAV+LSAQ+TD VNK T LFE TPQ M
Sbjct: 4 DEILDILEEMFPDAHCELEHRNAFELLVAVVLSAQTTDAAVNKVTPALFEAFKTPQAMAE 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+++ IR IG+YR K+ +I +LS L+ F+ +P++++ LT L G+GRK ANV+
Sbjct: 64 ADIHDIEDKIRRIGLYRNKARSIQNLSRSLLESFNGVVPESMKELTSLAGVGRKTANVVR 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+ F IP+I VDTH+ RIS R+GLA + VEQ L R + + AH+ + GRY
Sbjct: 124 SVCFDIPSIAVDTHVERISKRLGLAKVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRY 183
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
C AR P+C+ C CK+ K
Sbjct: 184 FCTARNPKCEECPFKEFCKKDK 205
>gi|254462114|ref|ZP_05075530.1| endonuclease III [Rhodobacterales bacterium HTCC2083]
gi|206678703|gb|EDZ43190.1| endonuclease III [Rhodobacteraceae bacterium HTCC2083]
Length = 217
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 107/215 (49%), Positives = 149/215 (69%), Gaps = 6/215 (2%)
Query: 19 LYTPKE------LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ P + + EIF F P PKGEL + N +TL+VAV LSAQSTD+ VNKAT
Sbjct: 1 MTKPAKQLPYAIMREIFTRFEASEPKPKGELDHTNAYTLVVAVALSAQSTDIGVNKATAE 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+IADTPQKML +G + + +I+TIG+YR K++N+I LS IL++++ +P + L
Sbjct: 61 LFKIADTPQKMLDLGLEGVIEHIKTIGLYRNKAKNVIKLSQILVDDYGGVVPNSRAALVS 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L+M + P+ VDTHIFRI NR G+ PGK + VE+++ +P Q
Sbjct: 121 LPGVGRKTANVVLNMWWSYPSQAVDTHIFRIGNRTGVCPGKDVDAVEKAIEDHVPVDFQQ 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+AH+WL+LHGRY+CKARKP C +CII +LC ++
Sbjct: 181 HAHHWLILHGRYICKARKPVCGNCIIKDLCLFEEK 215
>gi|319440455|ref|ZP_07989611.1| endonuclease III [Corynebacterium variabile DSM 44702]
Length = 243
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 106/212 (50%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+P L + I + ++P EL Y L+VA +LSAQ TD VN+ T
Sbjct: 14 PTPQSPLARTRRTRWINRTLAEEYPDAHCELDYTTPLELLVATVLSAQCTDKRVNQVTPA 73
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF + L+ IR G +R K+ N+I + L+ E+ ++P TL L
Sbjct: 74 LFAAFPDAVSYAGADRETLEEMIRPTGFFRNKASNLIRMGAALVEEYGGEVPGTLPELVA 133
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L AFG+P VDTH+ R+ R+GL P VE+ + ++ K
Sbjct: 134 LPGVGRKTANVVLGNAFGVPGFPVDTHVGRLVRRLGLTTETDPVVVEREITAMVEKKEWT 193
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ HGR VC +R+ C C+++ C
Sbjct: 194 MFSHRLIFHGRRVCHSRRAACGVCVLARRCPS 225
>gi|299530132|ref|ZP_07043558.1| endonuclease III [Comamonas testosteroni S44]
gi|298721789|gb|EFI62720.1| endonuclease III [Comamonas testosteroni S44]
Length = 218
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ F P+P+ EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKKNDIAPFFAALKAANPTPQTELEYTTVFELLTAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG+YR K+++++ +L+ +P+T E L LPG+GRK
Sbjct: 61 PQAILDLGLEGLESYIKTIGLYRSKAKHLMETCRMLVQLHGGTVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR GLAPGK P +VE+ LL+ +P ++ ++H+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLEVEKQLLKRVPDEYAVDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C+ S C
Sbjct: 181 LLGRYVCQARKPRCWECVASKYCDF 205
>gi|257456463|ref|ZP_05621659.1| endonuclease III [Treponema vincentii ATCC 35580]
gi|257446123|gb|EEV21170.1| endonuclease III [Treponema vincentii ATCC 35580]
Length = 219
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 143/205 (69%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + ++ + P P+ EL++ N +TL+VAV+LSAQ+TDV VNKAT LFE
Sbjct: 6 KLLPADAVYTVYERLRQENPDPRSELHWKNVYTLLVAVVLSAQATDVGVNKATAPLFEKV 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
DTP++MLA+GE+ L+ YI +I +Y K++ II+LS ILI ++ +++P L LPG+G
Sbjct: 66 DTPEQMLALGEEGLKGYINSINLYPTKAKRIIALSRILIEQYHSEVPHDRTALESLPGVG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L++ FG P I VDTHI R + RIGL+ G TP +VEQ LLR+ P + +AH+W
Sbjct: 126 RKTANVVLNVGFGEPAIAVDTHILRTAPRIGLSNGTTPLEVEQDLLRVTPEEFLLDAHHW 185
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++LHGRYVCKAR P C C ++++C
Sbjct: 186 ILLHGRYVCKARNPDCAGCNLNDVC 210
>gi|85714049|ref|ZP_01045038.1| endonuclease III/Nth [Nitrobacter sp. Nb-311A]
gi|85699175|gb|EAQ37043.1| endonuclease III/Nth [Nitrobacter sp. Nb-311A]
Length = 310
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 115/224 (51%), Positives = 164/224 (73%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+K + P +TP E+ E F F P PKGEL ++N +TL+VAV+LSAQ+TD
Sbjct: 80 AKPTRRSPALPPPLTPWTPAEVCEAFARFRRANPEPKGELEHLNPYTLLVAVVLSAQATD 139
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VNKAT+ LF +ADTP +MLA+GE+K+++YI+T+G+YR K+ NII+LS L+ EFD ++
Sbjct: 140 AGVNKATRALFAVADTPARMLALGEEKVRDYIKTVGLYRTKARNIIALSAKLLAEFDGEV 199
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P + G+ LPG GRK ANV+L+MAFG T+ VDTH+FR++NR G+APGKTP +VE L
Sbjct: 200 PHSRAGIESLPGAGRKTANVVLNMAFGERTMAVDTHVFRVANRTGMAPGKTPLEVELGLE 259
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
R+IP + +AH+WL+LHGRY C AR P+C+ C+I++LC+ ++
Sbjct: 260 RVIPNQFMLHAHHWLILHGRYTCLARSPRCKVCLINDLCRWPEK 303
>gi|212715393|ref|ZP_03323521.1| hypothetical protein BIFCAT_00288 [Bifidobacterium catenulatum DSM
16992]
gi|212661699|gb|EEB22274.1| hypothetical protein BIFCAT_00288 [Bifidobacterium catenulatum DSM
16992]
Length = 209
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + P PK L + N F L+VA +LSAQ+TD VN T LF+ P + +
Sbjct: 5 YAVLCEEIPHPKCALNFSNPFELLVATVLSAQTTDKRVNMVTPELFDEYPGPDALASANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +++ I +IG + K++NII LS+ L FD ++PQ ++ LT LPG+GRK ANV+L A
Sbjct: 65 EHVESIIHSIGFHHTKAKNIIGLSYALCERFDGEVPQNMDSLTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VDTH+ R+ + P +E+ + PP+ + + L+LHGR
Sbjct: 125 FGMPGFPVDTHVIRVTGRLRWRSDWASGSPDPKAIEREITACFPPEEWTDLSHRLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
+C ARKP C +C +++ C
Sbjct: 185 AICHARKPDCLNCPLNDTCPS 205
>gi|197124070|ref|YP_002136021.1| endonuclease III [Anaeromyxobacter sp. K]
gi|196173919|gb|ACG74892.1| endonuclease III [Anaeromyxobacter sp. K]
Length = 230
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ + + +P EI + P + L + + L+V+V+LSAQS
Sbjct: 1 MPPRSRLRARPRAPTAQAR--ARAAEIVDRLDAEMPEARIALAFEDDLQLLVSVILSAQS 58
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNK T LF ++L YIR++G++R K++ I++ + E
Sbjct: 59 TDAGVNKVTPALFARFPDAAAYAGAQPEELWPYIRSLGLFRNKAKAIVAAMGAIAREHGG 118
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+T E L LPG+GRK A V+L VDTH+ R+S R+GL + P++VE+
Sbjct: 119 RVPRTREALEALPGVGRKTAGVVLVHLGAAEAFPVDTHVGRVSRRLGLTREQDPDRVERD 178
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ ++P H V HGR C AR P C C++++LC +
Sbjct: 179 LMALLPESRWGRGHQLFVWHGRRTCAARAPACSRCVVADLCPK 221
>gi|120406380|ref|YP_956209.1| endonuclease III [Mycobacterium vanbaalenii PYR-1]
gi|119959198|gb|ABM16203.1| endonuclease III [Mycobacterium vanbaalenii PYR-1]
Length = 258
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
K + + LG + + + +P EL + + L VA +LSAQSTD
Sbjct: 12 RKSGRKWDEETHLGLVR---RARRMNRTLAQAFPHVYCELDFTDPLELTVATILSAQSTD 68
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T LF+ T + +L+ IR G YR K+ ++I L L FD ++
Sbjct: 69 KRVNLTTPALFKKYRTARDYATADRTELEELIRPTGFYRNKANSLIGLGQALEERFDGQV 128
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P+TL+ L LPG+GRK ANVIL AF IP I VDTH R+ R + P KVE +
Sbjct: 129 PRTLDELVTLPGVGRKTANVILGNAFDIPGITVDTHFGRLVRRWRWTAEEDPVKVEHIVG 188
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+I + ++ HGR VC ARKP C C+++ C
Sbjct: 189 ELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 230
>gi|158337187|ref|YP_001518362.1| endonuclease III [Acaryochloris marina MBIC11017]
gi|158307428|gb|ABW29045.1| endonuclease III [Acaryochloris marina MBIC11017]
Length = 224
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ +P L Y L+VA +LSAQ TD VN+ T LFE
Sbjct: 7 KKVKALELLDRLKQLYPEATCSLTYETPVQLLVATILSAQCTDERVNQVTPALFEAYPDA 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
L+ IR+ G YR K+++I ++ +FD ++P ++ L LPG+ RK
Sbjct: 67 LAFAEADRDALETLIRSTGFYRNKAKHIQGACQKIVRDFDGQVPNQMDLLLTLPGVARKT 126
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ +GI + VDTH+ R+SNR+GL + P K+EQ L++++P + N L+
Sbjct: 127 ANVVLAHGYGINMGVTVDTHVKRLSNRLGLTRHQDPVKIEQDLMKLLPQEDWENWSIRLI 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR VC ARKP C C +++LC +
Sbjct: 187 YHGRAVCSARKPTCDRCSLTDLCPSAGK 214
>gi|254369256|ref|ZP_04985268.1| hypothetical protein FTAG_00213 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122206|gb|EDO66346.1| hypothetical protein FTAG_00213 [Francisella tularensis subsp.
holarctica FSC022]
Length = 212
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIR-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPRCRNCIIYDYCEFKDK 208
>gi|303241731|ref|ZP_07328228.1| endonuclease III [Acetivibrio cellulolyticus CD2]
gi|302590732|gb|EFL60483.1| endonuclease III [Acetivibrio cellulolyticus CD2]
Length = 214
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 113/206 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI +F + + L Y + L+++ L+AQ TD VN T+ L++
Sbjct: 1 MDKRARVIEIIKIFDVLYSDADCTLDYKDPLQLLISTQLAAQCTDARVNIVTQSLYKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +L+ I+ G Y K+ NI +LI++F K+P L L LPG+GR
Sbjct: 61 SVFDFANADLNELEQDIKPTGFYHNKARNIKETCKMLIDKFKGKVPDNLNDLLTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++LS +GIP I +DTH R+SNRIGL+ + P K+E L+ I+P ++ + L
Sbjct: 121 KTANLVLSDIYGIPGIVIDTHAKRLSNRIGLSKNEDPTKIEFDLMEIVPKENWSKFCHQL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
V HGR VC+ARKP+C C I + C
Sbjct: 181 VYHGRAVCQARKPECAKCGILDYCDY 206
>gi|58039727|ref|YP_191691.1| endonuclease III [Gluconobacter oxydans 621H]
gi|58002141|gb|AAW61035.1| Endonuclease III [Gluconobacter oxydans 621H]
Length = 232
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 127/213 (59%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ + + + P+ + EL + N F L+V+V+LSAQ+TD +VNKATK
Sbjct: 4 APATASRAMSKAAAKAFITALAEANPNAESELVFRNPFELLVSVVLSAQATDKSVNKATK 63
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LFE A P M A+GE + +IRTIG++R K+ N+ L L+ ++P L
Sbjct: 64 GLFEEAPDPASMAALGEDGIARHIRTIGLWRAKAHNVALLCEQLLERHGGQVPSDRASLE 123
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
L G+GRK ANV++++AFG T+ VDTHIFRI NR GLAPGKT +VE L+ IP
Sbjct: 124 ALAGVGRKTANVVMNVAFGADTMAVDTHIFRIGNRTGLAPGKTVRQVEDGLVARIPKDML 183
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH+WL+LHGRYVCKAR P+C C + C
Sbjct: 184 RPAHHWLILHGRYVCKARAPECWRCPATKWCLY 216
>gi|15645210|ref|NP_207380.1| endonuclease III (nth) [Helicobacter pylori 26695]
gi|2313704|gb|AAD07651.1| endonuclease III (nth) [Helicobacter pylori 26695]
Length = 218
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL + N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 5 LKRAKTHQKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ K P K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANCIAVDTHVFRATHRLGLSNAKDPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|118497626|ref|YP_898676.1| endonuclease III [Francisella tularensis subsp. novicida U112]
gi|195536327|ref|ZP_03079334.1| endonuclease III [Francisella tularensis subsp. novicida FTE]
gi|254374441|ref|ZP_04989923.1| endonuclease III [Francisella novicida GA99-3548]
gi|118423532|gb|ABK89922.1| endonuclease III [Francisella novicida U112]
gi|151572161|gb|EDN37815.1| endonuclease III [Francisella novicida GA99-3548]
gi|194372804|gb|EDX27515.1| endonuclease III [Francisella tularensis subsp. novicida FTE]
Length = 212
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPKCRNCIIYDYCEFKDK 208
>gi|170742377|ref|YP_001771032.1| endonuclease III [Methylobacterium sp. 4-46]
gi|168196651|gb|ACA18598.1| endonuclease III [Methylobacterium sp. 4-46]
Length = 249
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 109/202 (53%), Positives = 150/202 (74%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L EIF S PSP+ +L Y+N +TL+VAV+LSAQ+TD +VN AT+ LF AD P
Sbjct: 40 ATLAEIFARLSAANPSPRSDLEYLNPYTLLVAVVLSAQATDRSVNLATRDLFAKADHPAA 99
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+GE+ ++ +IRTIG++ K+ N+I+LS IL+ E +P+ E L LPG+GRK A+
Sbjct: 100 MLALGEEVVRAHIRTIGLFNTKARNVIALSAILVAEHGGAVPRRREDLEVLPGVGRKTAS 159
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L++AFG PTI VDTHIFR+SNRI LAPG T +KV++ L I+P ++ NAH+WL+LHG
Sbjct: 160 VVLNVAFGEPTIAVDTHIFRVSNRIPLAPGTTTDKVQEGLEAIVPEPYRLNAHHWLILHG 219
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RY CKARKP+C C+I++LC+
Sbjct: 220 RYTCKARKPECWRCVIADLCRY 241
>gi|307352991|ref|YP_003894042.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
gi|307156224|gb|ADN35604.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
Length = 215
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ I+ + + ++ L + N F ++V +LSAQ+TD VN LF
Sbjct: 1 MQREKACRIYSILAAEYLDEDTNLNFLDFDNPFQILVMTILSAQTTDNMVNSVKDDLFSK 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
P + ++ ++ I+ G +R K++NII S IL ++F ++P+T+E L LPG+
Sbjct: 61 YPDPAALSQAKQEDVETIIKKTGFFRAKAKNIIESSKILCSDFGGEVPRTMEELVTLPGV 120
Query: 137 GRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK AN++L+ AFGI I VDTH+ R+S RIGL P K+E L + P +
Sbjct: 121 GRKTANIVLNHAFGIDEGIAVDTHVKRVSWRIGLTDNTDPVKIEMDLTALFPKDAWGKMN 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
Y L+ HGR +C ARKP C+ C+I + C+ ++
Sbjct: 181 YLLISHGRAICTARKPDCERCVIKDFCRYFRE 212
>gi|317153122|ref|YP_004121170.1| endonuclease III [Desulfovibrio aespoeensis Aspo-2]
gi|316943373|gb|ADU62424.1| endonuclease III [Desulfovibrio aespoeensis Aspo-2]
Length = 212
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T EI ++P+P L + N + L+VA +L+AQ TD VNK T LFE
Sbjct: 1 MNTKDRAREIHARLKGRYPAPAPALDWTNAWELLVATVLAAQCTDERVNKVTPVLFERWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +L+ +R+ G +R K++N+ + + +++ + ++P+T+ L L G+ R
Sbjct: 61 DIASLAEADVAQLETVVRSTGFFRNKAKNLKAAARRVVDVYGGEVPRTMADLITLGGVAR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++LS AF I VDTH+ R+S R+GL P ++E+ L+ + P +++
Sbjct: 121 KTANIVLSNAFNVHEGIAVDTHVKRLSFRMGLTANTDPVRIEKDLMPLYPRAAWGEINHF 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LV GR VC AR P+C SC ++++C +
Sbjct: 181 LVYFGREVCPARTPKCASCELNDICPK 207
>gi|162447100|ref|YP_001620232.1| endonuclease III [Acholeplasma laidlawii PG-8A]
gi|161985207|gb|ABX80856.1| endonuclease III [Acholeplasma laidlawii PG-8A]
Length = 214
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 1/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T + + +P K EL + N+F LIVAV+LSAQ+TD+ VNK TK LF T
Sbjct: 1 MTKSQRIFFSHYLEELFPDAKAELDFTNNFELIVAVVLSAQTTDIAVNKVTKDLFRKYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++ + + I+TIG+Y+ KS+NII L+ L+ ++D +P + L LPG+GRK
Sbjct: 61 PNDLMHADVDDVMDTIKTIGLYKTKSKNIIGLAKRLVEDYDGLVPSERKDLESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+LS AFGIP + VDTHI RIS R+GLA +VE L + P + + H+ L
Sbjct: 121 TANVVLSNAFGIPALAVDTHILRISKRLGLADETDDVLEVEMKLNKQFPKELWHKLHHQL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GRY C ARKP C +C + ++C K
Sbjct: 181 IFFGRYHCIARKPNCDTCKMQDMCPHFK 208
>gi|187927966|ref|YP_001898453.1| endonuclease III [Ralstonia pickettii 12J]
gi|187724856|gb|ACD26021.1| endonuclease III [Ralstonia pickettii 12J]
Length = 214
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 103/205 (50%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ IF P+P EL Y F L++AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MNSAKRHAIFETLRENNPTPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+LA+GE+ + YI+TIG+YR K ++I+ IL++++ ++P+ L LPG+GRK
Sbjct: 61 PAKLLALGEEGITEYIKTIGLYRTKCKHILQTCRILLDQYGGEVPRERAALEELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+++ AFG PTI VDTHIFR++NR GLAPGK +VE LL+++P + +AH+WL+
Sbjct: 121 TANVVMNTAFGEPTIAVDTHIFRVANRTGLAPGKNVLEVELKLLKVVPEAFRQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKARKP+C C I LC+
Sbjct: 181 LHGRYVCKARKPECWHCAIEPLCEF 205
>gi|330817876|ref|YP_004361581.1| Endonuclease III [Burkholderia gladioli BSR3]
gi|327370269|gb|AEA61625.1| Endonuclease III [Burkholderia gladioli BSR3]
Length = 214
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 138/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLRSLNPHPTTELEYSTPFELLIAVMLSAQATDVSVNKAMRRMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++LA+GE + +YI+TIG+Y+ K++N+I+ IL+ + ++P E L LPG+GRK
Sbjct: 61 PSQVLALGEAGVTDYIKTIGLYKTKAKNVIATCRILLEQHAGEVPADREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + +AH+WL+
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEIALEKFTPAEFLQDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCDF 205
>gi|323464453|gb|ADX76606.1| endonuclease III [Staphylococcus pseudintermedius ED99]
Length = 224
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + +P + EL + N F L +AVLLSAQ TD VN+ TK LF+
Sbjct: 1 MISKKKALEMIDVIDQMFPDAQCELVHENPFELTIAVLLSAQCTDNTVNRVTKDLFQKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI LS L++++D +P T E L L G+GR
Sbjct: 61 TPEDYLAVDLEELQQDIRSIGLYRNKAKNIQKLSQSLLDQYDGIVPHTHEQLEGLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ + +VE+ L IIP + +H+
Sbjct: 121 KTANVVMSVAFGEPALAVDTHVERVSKRLGICRWKDSVTEVERRLTSIIPRERWTKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C A+KP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLAKKPKCGVCPLFEDCREGQK 210
>gi|260219550|emb|CBA26395.1| Endonuclease III [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 214
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 98/203 (48%), Positives = 145/203 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P ++E+ F P+P+ EL + + F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKPAQIEDFFATLQAANPNPQTELEFSSVFELLAAVLLSAQATDVGVNKATRKLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ++L +G L+ +I+TIG++R K+++++ +L++ ++P E L LPG+GRK
Sbjct: 61 PQRILDLGLSGLEQHIKTIGLFRSKAKHLMETCRMLVDLHGGRVPADRESLEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTH+FR+ NR GLAPGKTP +VE LL+ IP ++ +AH+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHLFRLGNRTGLAPGKTPLEVELKLLKRIPARYMVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRYVC+ARKP C C ++ C
Sbjct: 181 LHGRYVCQARKPLCWQCSVNQAC 203
>gi|115314726|ref|YP_763449.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella tularensis
subsp. holarctica OSU18]
gi|115129625|gb|ABI82812.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella tularensis
subsp. holarctica OSU18]
Length = 218
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AF PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFSKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPRCRNCIIYDYCEFKDK 208
>gi|108801779|ref|YP_641976.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. MCS]
gi|119870930|ref|YP_940882.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. KMS]
gi|108772198|gb|ABG10920.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. MCS]
gi|119697019|gb|ABL94092.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. KMS]
Length = 259
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+ + + LG + + + +P EL + N L VA +LSAQSTD
Sbjct: 13 RAAAKKWDNETQLGLVR---RARRMNRALAQAFPHVYCELDFTNPLELAVATILSAQSTD 69
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T LF+ T +L+ IR G YR K+ ++I L L+ FD ++
Sbjct: 70 KRVNLTTPALFKKYRTALDYAQADRTELEELIRPTGFYRNKANSLIRLGQELVERFDGQV 129
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P ++ L LPG+GRK ANVIL AF +P I VDTH R+ R + P KVE ++
Sbjct: 130 PADIDDLVTLPGVGRKTANVILGNAFEVPGITVDTHFGRLVRRWRWTAEEDPVKVEHAIG 189
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++I + ++ HGR VC ARKP C C+++ C
Sbjct: 190 KLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSF 231
>gi|56707770|ref|YP_169666.1| endonuclease III [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670241|ref|YP_666798.1| endonuclease III [Francisella tularensis subsp. tularensis FSC198]
gi|134302047|ref|YP_001122016.1| endonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224456841|ref|ZP_03665314.1| endonuclease III [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370270|ref|ZP_04986275.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874582|ref|ZP_05247292.1| endonuclease III [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604262|emb|CAG45281.1| Endonuclease III [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320574|emb|CAL08664.1| Endonuclease III [Francisella tularensis subsp. tularensis FSC198]
gi|134049824|gb|ABO46895.1| endonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568513|gb|EDN34167.1| hypothetical protein FTBG_00020 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840581|gb|EET19017.1| endonuclease III [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158942|gb|ADA78333.1| endonuclease III [Francisella tularensis subsp. tularensis
NE061598]
Length = 212
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPRCRNCIIYDYCEFKDK 208
>gi|53714554|ref|YP_100546.1| endonuclease III [Bacteroides fragilis YCH46]
gi|52217419|dbj|BAD50012.1| endonuclease III [Bacteroides fragilis YCH46]
Length = 225
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T +++
Sbjct: 1 MTKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPRIYQDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ KS++++ ++ +L+N+F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVNDFNSEVPDTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P VE+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVGNSCTTPFSVEKELMKNIPDELIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C++C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCETCGLQLMCKYY 209
>gi|89901383|ref|YP_523854.1| endonuclease III [Rhodoferax ferrireducens T118]
gi|89346120|gb|ABD70323.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rhodoferax ferrireducens T118]
Length = 217
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 148/205 (72%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP +E F P P+ EL Y + F L+VAVLLSAQ+TDV+VNK T+ LF +A+T
Sbjct: 1 MTPAAIESFFATLKAANPHPQTELAYASVFELLVAVLLSAQATDVSVNKVTRRLFLVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKML +G + L+ +I+TIG+Y K+ +++ +L++++ +P+TLE L LPG+GRK
Sbjct: 61 PQKMLDLGLEGLEEHIKTIGLYHAKARHLMQTCRMLVDQYGGAVPRTLEALQTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL++AFG PT+ VDTH+FR++NR GLAPGKTP +VE LL+ IP ++ +AH+WL+
Sbjct: 121 TANVILNVAFGEPTMAVDTHLFRVANRTGLAPGKTPYEVEMKLLKRIPAEYLVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC+ARKP C C +S C
Sbjct: 181 LHGRYVCQARKPLCWQCAVSAFCDF 205
>gi|299137629|ref|ZP_07030810.1| endonuclease III [Acidobacterium sp. MP5ACTX8]
gi|298600270|gb|EFI56427.1| endonuclease III [Acidobacterium sp. MP5ACTX8]
Length = 300
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
P+ + I +P+ L + N F L +A LSAQ+TDV VNK
Sbjct: 76 PKAKRGKTAKPLAPERVAAILDALRKTYPNVVCALTHRNAFELTIATALSAQTTDVTVNK 135
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF++ TP+ + +++ I T G YR K++NI + +L+ +F++++P+T+E
Sbjct: 136 VTPELFKMFPTPKALAEAPLLEIERIIHTTGFYRAKAKNIKGAAQVLVEKFNSQVPKTIE 195
Query: 129 GLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
+ +LPG+ RK ANV+L FGIP+ + VDTH+ RIS R+ L P KVEQ L ++IP
Sbjct: 196 EMIQLPGVARKTANVVLGSWFGIPSGVVVDTHVLRISRRLELTQATEPVKVEQDLQKVIP 255
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ HGR VC ARKP+C C + LC +
Sbjct: 256 QDRWIQFSHELIHHGRQVCIARKPKCVDCSLEKLCNSADK 295
>gi|254440353|ref|ZP_05053847.1| endonuclease III [Octadecabacter antarcticus 307]
gi|198255799|gb|EDY80113.1| endonuclease III [Octadecabacter antarcticus 307]
Length = 214
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P P GEL +VN +TL+VAV LSAQ+TD VNKAT LF+IADTPQKML
Sbjct: 10 IREIFTRFQAGEPEPLGELDHVNAYTLVVAVALSAQATDKGVNKATAALFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ + ++IRTIG++R K++N+I +S +L++++ +P + L LPG+GRK ANV+
Sbjct: 70 DLGEQGVIDHIRTIGLFRNKAKNVIKMSQLLVDDYGGVVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+W++LHGRY
Sbjct: 130 LNMWWGQPAQAVDTHIFRLGNRSGIAPGKNVDAVERAIEDNIPADFQLHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C ARKP+CQ+C I +LC+
Sbjct: 190 ICVARKPKCQACHIRDLCQF 209
>gi|154488115|ref|ZP_02029232.1| hypothetical protein BIFADO_01686 [Bifidobacterium adolescentis
L2-32]
gi|154083588|gb|EDN82633.1| hypothetical protein BIFADO_01686 [Bifidobacterium adolescentis
L2-32]
Length = 221
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 8/217 (3%)
Query: 16 LGCLYTPKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + + + ++ P PK L + + F L+VA +LSAQ+TD VN T
Sbjct: 1 MPRESKKARIARMHQEYEQLCVEIPDPKCALNFNSPFELLVATVLSAQTTDKRVNMVTPE 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF P ++ A + +++ IRTIG +R K+ NII LSH L F ++P + L
Sbjct: 61 LFGEYPGPAELAAANPEHVEDIIRTIGFFRTKARNIIGLSHELCVRFGGEVPADMASLVS 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIP 187
LPG+GRK ANV+L AFG+P VDTH+ R+ +P P +E+ + P
Sbjct: 121 LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRSDWASPSPDPVAIEREVTACFP 180
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P+ + + L+LHGR +C ARKP C C +++ C
Sbjct: 181 PEEWTDLSHRLILHGRAICHARKPDCADCPLNDTCPS 217
>gi|192360120|ref|YP_001981598.1| endonuclease III [Cellvibrio japonicus Ueda107]
gi|190686285|gb|ACE83963.1| endonuclease III [Cellvibrio japonicus Ueda107]
Length = 238
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 119/225 (52%), Gaps = 3/225 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLY---TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLL 57
M S++++ P+ L + + I +P P L + + +TL++AVLL
Sbjct: 1 MCGSRRTNQNFFAKPMSELKPLSKSQRIAFILRRLQELYPQPPIPLQHEDAYTLLIAVLL 60
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
SAQ TD VN T LF +AD P M + +K+Q IR G+ +KS I LS +L++
Sbjct: 61 SAQCTDERVNTVTPALFALADNPADMAKVPVEKIQEIIRPCGLSPQKSRAISVLSSMLMD 120
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
E + ++P+ E L RLPG+G K A+V++S FG P VDTHI R++ R GL GK +
Sbjct: 121 EHNGQVPEDWEALERLPGVGHKTASVVMSQGFGHPAFPVDTHIHRLAQRWGLTNGKNVVQ 180
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E+ L R+ P + + H ++ +GR C AR C I C
Sbjct: 181 TEKDLKRLFPQERWNDLHLQIIYYGREHCSARGCDGTVCEICRTC 225
>gi|58696904|ref|ZP_00372410.1| endonuclease III [Wolbachia endosymbiont of Drosophila simulans]
gi|225630400|ref|YP_002727191.1| endonuclease III [Wolbachia sp. wRi]
gi|58536872|gb|EAL60070.1| endonuclease III [Wolbachia endosymbiont of Drosophila simulans]
gi|225592381|gb|ACN95400.1| endonuclease III [Wolbachia sp. wRi]
Length = 212
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 114/211 (54%), Positives = 151/211 (71%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++E IF F P+PK EL Y N FTL+VA++LSA++TD++VNK TK LF I DT
Sbjct: 1 MDSKKVELIFEKFQQSNPAPKIELNYTNDFTLLVAIVLSARTTDISVNKITKELFSITDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML+ G+ +L+ I +IG+Y K++NII LS ILI +++K+P + L LPG+GRK
Sbjct: 61 PEKMLSFGQSELRKCISSIGLYNSKAKNIIGLSKILIERYNSKVPTDFDDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ GIPT+ VDTH+FR+SNRIGL K K EQSLL ++P K+ AH+WLV
Sbjct: 121 SANVFLNSGLGIPTLAVDTHVFRVSNRIGLVKEKDVFKTEQSLLNVVPKKYLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNL----CKRIK 226
LHGRYVCKA+KP C++CII +L CKR K
Sbjct: 181 LHGRYVCKAQKPSCETCIIHDLCEFECKRYK 211
>gi|108759427|ref|YP_629688.1| endonuclease III [Myxococcus xanthus DK 1622]
gi|108463307|gb|ABF88492.1| endonuclease III [Myxococcus xanthus DK 1622]
Length = 238
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 106/204 (51%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K + + P + EL Y L+VAV+LSAQ TD VN T LF+
Sbjct: 10 KRKRALLVMDRLAADMPDARIELDYRTPLELLVAVILSAQCTDKRVNMVTPALFQRFSDA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q ++ +IRT G+YR K++NI++ + L+ E ++P + L +LPG+GRK
Sbjct: 70 QAYAEAEPSDVEPFIRTCGLYRAKAKNIVAAARSLVQEHAGQVPLKRDALEKLPGVGRKT 129
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+ G VDTH+ R++ R+G P+KVE + ++P + H LV
Sbjct: 130 AGVVCIHLGGDVAFPVDTHVKRLAYRLGFTTKADPDKVEADMQAVLPSERWALGHQLLVW 189
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR C AR P C+ C++++LC +
Sbjct: 190 HGRRTCFARSPACERCVVADLCPK 213
>gi|163740470|ref|ZP_02147864.1| endonuclease III [Phaeobacter gallaeciensis 2.10]
gi|161386328|gb|EDQ10703.1| endonuclease III [Phaeobacter gallaeciensis 2.10]
Length = 214
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 109/200 (54%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VN+AT+ LF+IADTPQKML
Sbjct: 10 LREIFTRFQAADPEPKGELDHVNVYTLVVAVALSAQATDAGVNRATRELFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L +I+TIG+YR+K++N+I +S IL+ ++D +P + L LPG+GRK ANV+
Sbjct: 70 DLGEEGLIEHIKTIGLYRQKAKNVIKMSRILVEDYDGIVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+APGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRQPAQAVDTHIFRVGNRAGIAPGKDVDAVERAVEDNIPADFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +CII +LC+
Sbjct: 190 HCKARKPMCPTCIIRDLCQF 209
>gi|260432174|ref|ZP_05786145.1| endonuclease III [Silicibacter lacuscaerulensis ITI-1157]
gi|260416002|gb|EEX09261.1| endonuclease III [Silicibacter lacuscaerulensis ITI-1157]
Length = 232
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 149/212 (70%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + + EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+
Sbjct: 16 KARMAKQLDYHTIREIFTRFQQADPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRA 75
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+IADTPQKML +GE+ L +I+TIG++R+K++N+I +S IL+ E+ ++P + L
Sbjct: 76 LFKIADTPQKMLDLGEEGLIEHIKTIGLFRQKAKNVIKMSRILVEEYGGEVPNSRAALQS 135
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANV+L+M + P VDTHIFR+ NR G+ PGK + VE+++ IP Q
Sbjct: 136 LPGVGRKTANVVLNMWWRYPAQAVDTHIFRVGNRTGICPGKDVDAVERAIEDNIPVDFQL 195
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+AH+WL+LHGRY CKARKPQC +C+I +LC+
Sbjct: 196 HAHHWLILHGRYHCKARKPQCGTCLIRDLCQF 227
>gi|319892444|ref|YP_004149319.1| Endonuclease III [Staphylococcus pseudintermedius HKU10-03]
gi|317162140|gb|ADV05683.1| Endonuclease III [Staphylococcus pseudintermedius HKU10-03]
Length = 224
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + +P + EL + N F L +AVLLSAQ TD VN+ TK LF+
Sbjct: 1 MISKKKALEMIDVIDQMFPDAQCELVHENPFELTIAVLLSAQCTDNTVNRVTKDLFQKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI LS L++++D +P T E L L G+GR
Sbjct: 61 TPEDYLAVDLEELQQDIRSIGLYRNKAKNIQKLSQSLLDQYDGIVPHTHEQLEGLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ + +VE+ L IIP + +H+
Sbjct: 121 KTANVVMSVAFGEPALAVDTHVERVSKRLGICRWKDSVAEVERRLTSIIPRERWTKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C A+KP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLAKKPKCGVCPLFEDCREGQK 210
>gi|317009437|gb|ADU80017.1| endonuclease III [Helicobacter pylori India7]
Length = 218
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL + N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 5 LKRAKTHQKAQQIKELLLKHYPNQTTELCHKNPYELLVATILSAQCTDARVNQITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVNDLALASLEEVKEIIQSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ KTP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNAKTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCDACFLKEFC 210
>gi|264677992|ref|YP_003277899.1| endonuclease III [Comamonas testosteroni CNB-2]
gi|262208505|gb|ACY32603.1| endonuclease III [Comamonas testosteroni CNB-2]
Length = 218
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ F P+P+ EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKKNDIAPFFAALKAANPTPQTELEYTTVFELLTAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG+YR K+++++ +L+ +P+T E L LPG+GRK
Sbjct: 61 PQAILDLGLEGLESYIKTIGLYRSKAKHLMETCRMLVQLHGGTVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR GLAPGK P +VE+ LL+ +P ++ ++H+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLEVEKQLLKRVPDEYAVDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C+ S C
Sbjct: 181 LLGRYVCQARKPRCWECVASKYCDF 205
>gi|291280018|ref|YP_003496853.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754720|dbj|BAI81097.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 212
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 19 LYTPKEL-EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ KE+ E+ + K L Y N F L++A +LSAQ TD VNK T LF+
Sbjct: 1 MTNRKEIAEKFVKYLDENFADSKCSLKYENPFQLLIATILSAQCTDERVNKVTATLFKKY 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ +++ IR G +R K++NI LS +++ +++ IP + L +LPGIG
Sbjct: 61 KNFEDFKNADLEEIMEDIRPTGFFRNKAKNIKKLSEVILEKYEGVIPVDINELVKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L F IP I VDTH+ RIS R+GL P+K+EQ L+ +IP + +
Sbjct: 121 RKTANVLLGNCFNIPGIVVDTHVKRISQRLGLTDNDNPDKIEQDLMEVIPKEKWTKWSHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
++ GR +C A+KP+C C + ++CK
Sbjct: 181 VIDFGRKICTAKKPKCDICEMRDVCKF 207
>gi|15614261|ref|NP_242564.1| endonuclease III (DNA repair) [Bacillus halodurans C-125]
gi|10174315|dbj|BAB05417.1| endonuclease III (DNA repair) [Bacillus halodurans C-125]
Length = 218
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ +E + + +P + EL + N F L++AV+LSAQ TD VNK T LF
Sbjct: 1 MLTKKQTQEALAVIADMYPDAECELTHSNPFELLIAVVLSAQCTDALVNKVTPRLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +A+ ++L+ IR+IG+YR K++NI L L+ ++ ++PQ + L +L G+GR
Sbjct: 61 TPEDYIAVPLEELEQDIRSIGLYRNKAKNIKKLCQSLLEQYGGEVPQDRDELVKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFG+P I VDTH+ R+S R+G+ +VEQ+L++ IP +H+
Sbjct: 121 KTANVVASVAFGVPAIAVDTHVERVSKRLGICRWKDNVTQVEQTLMKKIPMDEWSISHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ PQC C + ++C+ K+
Sbjct: 181 LIFFGRYHCKAQNPQCDICPLLDMCREGKK 210
>gi|325267148|ref|ZP_08133816.1| endonuclease III [Kingella denitrificans ATCC 33394]
gi|324981386|gb|EGC17030.1| endonuclease III [Kingella denitrificans ATCC 33394]
Length = 209
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 136/205 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E+F + P P EL + F L++AVLLSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNKHIRTEMFQRWREANPHPTTELQFSTPFELLIAVLLSAQATDAGVNKATAKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G + + Y RTIG+Y+ KS++II IL+ ++ +IP T E L LPG+GRK
Sbjct: 61 PQAMLDLGLEGIMQYTRTIGLYKTKSKHIIETCKILVQQYGGEIPHTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR++NR LAPGK +VE L++ IP + +AH+WL+
Sbjct: 121 TANVVLNTAFRQPVMAVDTHIFRVANRTKLAPGKNVREVEDKLMKFIPKEFLLDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY CKA+KPQC C+I +LC+
Sbjct: 181 LHGRYTCKAQKPQCGKCLIYDLCEY 205
>gi|225352581|ref|ZP_03743604.1| hypothetical protein BIFPSEUDO_04205 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156775|gb|EEG70169.1| hypothetical protein BIFPSEUDO_04205 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 209
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + P PK L + N F L+VA +LSAQ+TD VN T LF P + +
Sbjct: 5 YAVLCEEIPHPKCALNFSNPFELLVATVLSAQTTDKRVNMVTPELFGEYPGPAALASANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +++ I +IG + K++NII LS+ L FD ++PQT++ LT LPG+GRK ANV+L A
Sbjct: 65 EHVESIIHSIGFHHTKAKNIIGLSYALCERFDGEVPQTMDALTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VDTH+ R+ + P +E+ + PP+ + + L+LHGR
Sbjct: 125 FGVPGFPVDTHVIRVTGRLRWRSDWASGSPDPKAIEREITACFPPEEWTDLSHRLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
+C ARKP C +C +++ C
Sbjct: 185 AICHARKPDCLNCPLNDTCPS 205
>gi|86608470|ref|YP_477232.1| endonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557012|gb|ABD01969.1| endonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 234
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI +P+ L+Y L+VA +LSAQ TD VN+ T LF Q
Sbjct: 8 RQRALEILLRLKRHYPNSTCALHYRTPLQLLVATILSAQCTDERVNQVTPELFRRFPDAQ 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ I + G YR K+++I +++ F ++P+T+ L LPG+ RK A
Sbjct: 68 ALATAPREEIEALIHSTGFYRNKAKHIQEACRRILSHFGGQVPRTMPELLTLPGVARKTA 127
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ AFGI + VDTH+ R+S R+GL + P ++E+ L++++P N L+
Sbjct: 128 NVVLAHAFGINAGVTVDTHVKRLSRRLGLTEHEDPVRIEKDLMQLLPQADWENWSIRLID 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR +C AR+P CQ C +++LC
Sbjct: 188 HGRAICTARRPLCQQCFLADLCPS 211
>gi|253565058|ref|ZP_04842514.1| endonuclease III [Bacteroides sp. 3_2_5]
gi|265765983|ref|ZP_06094024.1| endonuclease III [Bacteroides sp. 2_1_16]
gi|251946523|gb|EES86900.1| endonuclease III [Bacteroides sp. 3_2_5]
gi|263253651|gb|EEZ25116.1| endonuclease III [Bacteroides sp. 2_1_16]
gi|301164051|emb|CBW23607.1| putative endonuclease [Bacteroides fragilis 638R]
Length = 225
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T +++
Sbjct: 1 MTKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPRIYQDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ KS++++ ++ +L+N+F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVNDFNSEVPDTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P VE+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVGNSCTTPFSVEKELMKNIPDELIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C++C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCETCGLQLMCKYY 209
>gi|220918837|ref|YP_002494141.1| endonuclease III [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956691|gb|ACL67075.1| endonuclease III [Anaeromyxobacter dehalogenans 2CP-1]
Length = 230
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+ + + +P EI + P + L + + L+V+V+LSAQS
Sbjct: 1 MPPRSRLRARPRAPTAQAR--ARAAEIVDRLDAEMPEARIALAFQDDLQLLVSVILSAQS 58
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VNK T LF ++L Y+R++G++R K++ I++ + E
Sbjct: 59 TDAGVNKVTPALFARFPDAAAYAGAQPEELWPYLRSLGLFRNKAKAIVAAMGAIAREHGG 118
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+T E L LPG+GRK A V+L VDTH+ R+S R+GL + P++VE+
Sbjct: 119 RVPRTREALEALPGVGRKTAGVVLVHLGAAEAFPVDTHVGRVSRRLGLTREQDPDRVERD 178
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ ++P H V HGR C AR P C C++++LC +
Sbjct: 179 LMALLPEARWGRGHQLFVWHGRRTCAARAPACSRCVVADLCPK 221
>gi|319957105|ref|YP_004168368.1| endonuclease iii [Nitratifractor salsuginis DSM 16511]
gi|319419509|gb|ADV46619.1| endonuclease III [Nitratifractor salsuginis DSM 16511]
Length = 224
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 123/215 (57%), Gaps = 1/215 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+G L T KE+EEI L +P EL+Y N + L+V+V+LSAQ TD VN
Sbjct: 4 PKGKVKKVKLATRKEIEEIKRLLLEHYPDSVTELHYRNLYELLVSVMLSAQCTDKRVNII 63
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LFE + ++++ I++ + K++N+++++ ++ ++ +IP +
Sbjct: 64 TPALFEKYPDIHALAQADVEEVKELIKSCSFFNNKAKNLVAMARMVEEQYGGEIPLDEKE 123
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L +LPG+G+K A+V+L G + VDTH+FR+++R+GL+ TP E+ L+R
Sbjct: 124 LVKLPGVGQKTAHVVLIEYTGANLMAVDTHVFRVAHRLGLSNATTPEGTEEDLVRKF-KT 182
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ H +VL GRY+CKA KP+C+ C ++ CK
Sbjct: 183 DLHRLHQAMVLFGRYICKAVKPECERCFLTEYCKS 217
>gi|76802881|ref|YP_330976.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
gi|76558746|emb|CAI50339.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
Length = 229
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ E+ ++P P+ L + N L+VAV+LSAQ TD VN T+ LFE +TP
Sbjct: 8 RESQVAEVLDRLYEEYPEPEISLRFSNRLELLVAVVLSAQCTDERVNTVTETLFEKYETP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++ + +++L + I +I Y K+ + S ++ + + ++P T+ LT L G+GRK
Sbjct: 68 EEYASADKEELASDIDSITYYNNKAGYLTSACADIVEKHNGEVPDTMSELTDLAGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ RIS R+G+ K P+ +E L+ I+P + L+
Sbjct: 128 ANVVLQHGHEVVEGIVVDTHVQRISRRLGMTTEKRPDAIEDDLIDIVPQDDWKEFTHLLI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C AR P C CI+ ++C K
Sbjct: 188 SHGRETCTARNPDCGDCILEDICPSSK 214
>gi|87124068|ref|ZP_01079918.1| endonuclease III [Synechococcus sp. RS9917]
gi|86168637|gb|EAQ69894.1| endonuclease III [Synechococcus sp. RS9917]
Length = 217
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 114/201 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + +P P L + + FTL+VAVLLSAQ TD VN+ T LF A
Sbjct: 1 MNKQQRAQRILERLNEHYPEPPIPLDHSDPFTLLVAVLLSAQCTDRKVNEVTPALFAAAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + A+ E ++ ++IR +G+ + K+ ++ L+HIL+ ++P++ E L LPG+G
Sbjct: 61 TPQALAALEEGEILSFIRQLGLAKTKARHLKKLAHILVEIHGGEVPRSFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + E L + P + H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSKGLSVERTEADLKALFPKEAWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGRDHCTARGCDGTVCPLC 201
>gi|314936413|ref|ZP_07843760.1| endonuclease III [Staphylococcus hominis subsp. hominis C80]
gi|313655032|gb|EFS18777.1| endonuclease III [Staphylococcus hominis subsp. hominis C80]
Length = 223
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD VNK T+ LF+
Sbjct: 1 MVSKKKALEMIDVIADMFPDAECELKHDNPFELTIAVLLSAQCTDNLVNKVTRSLFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQN I++IG+YR K++NI L L++++ ++P T + L L G+GR
Sbjct: 61 TPEDYLKVDIEELQNDIKSIGLYRNKAKNIKKLCQSLLDQYGGQVPHTHKDLESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE+ L IIP + +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINKWKDNVKQVEERLCDIIPKERWSKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCIARKPKCDICPLLEDCREGQK 210
>gi|89256272|ref|YP_513634.1| endonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|156502338|ref|YP_001428403.1| endonuclease III [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953108|ref|ZP_06557729.1| endonuclease III [Francisella tularensis subsp. holarctica URFT1]
gi|295313636|ref|ZP_06804220.1| endonuclease III [Francisella tularensis subsp. holarctica URFT1]
gi|89144103|emb|CAJ79360.1| Endonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|156252941|gb|ABU61447.1| endonuclease III [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 212
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFETWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +F + +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFGSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AF PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFSKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A++P+C++CII + C+ +
Sbjct: 180 ILHGRYICTAQRPRCRNCIIYDYCEFKDK 208
>gi|126437767|ref|YP_001073458.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. JLS]
gi|126237567|gb|ABO00968.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. JLS]
Length = 259
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
+ + + LG + + + +P EL + + L VA +LSAQSTD
Sbjct: 13 RAAAKKWDNETQLGLVR---RARRMNRALAQAFPHVYCELDFTDPLELAVATILSAQSTD 69
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T LF+ T +L+ IR G YR K+ ++I L L+ FD ++
Sbjct: 70 KRVNLTTPALFKKYRTALDYAQADRTELEELIRPTGFYRNKANSLIRLGQELVERFDGQV 129
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P ++ L LPG+GRK ANVIL AF +P I VDTH R+ R + P KVE ++
Sbjct: 130 PADIDDLVTLPGVGRKTANVILGNAFDVPGITVDTHFGRLVRRWRWTAEEDPVKVEHAIG 189
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++I + ++ HGR VC ARKP C C+++ C
Sbjct: 190 KLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSF 231
>gi|50841716|ref|YP_054943.1| putative endonuclease III [Propionibacterium acnes KPA171202]
gi|50839318|gb|AAT81985.1| putative endonuclease III [Propionibacterium acnes KPA171202]
Length = 308
Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 105/203 (51%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL Y + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 89 ANEVRALLAKAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 148
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 149 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVV 208
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 209 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 268
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 269 RCHSRRPACGVCPVAEWCPSFGE 291
>gi|67923355|ref|ZP_00516836.1| Endonuclease III/Nth [Crocosphaera watsonii WH 8501]
gi|67854780|gb|EAM50058.1| Endonuclease III/Nth [Crocosphaera watsonii WH 8501]
Length = 211
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ +I + +P L Y + L+VA +LSAQ TD VNK T LF
Sbjct: 5 KKQKALKILTILKELYPDATCSLTYDSPVQLLVATILSAQCTDERVNKVTPELFARFPDA 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + L+ IR+ G YR K++NI ++ +F+ K+PQT+E L L G+ RK
Sbjct: 65 IALANADRETLETLIRSTGFYRNKAKNIQGACQKIVKDFNGKVPQTMEELLLLSGVARKT 124
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFGI + VDTH+ R+S R+GL P K+E+ L+ ++P K N ++
Sbjct: 125 ANVVLAHAFGINAGVTVDTHVKRLSQRLGLTKATDPVKIEKDLMPLLPQKDWENFSIRII 184
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR +CKARKP CQ C ++ LC
Sbjct: 185 YHGRQICKARKPNCQDCQLAFLCPS 209
>gi|257094519|ref|YP_003168160.1| endonuclease III [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257047043|gb|ACV36231.1| endonuclease III [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 228
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 101/204 (49%), Positives = 139/204 (68%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ E+F P P EL Y F L++AV+LSAQ+TD +VN AT+ LF A TPQ M
Sbjct: 15 QRHELFARLRAANPQPATELAYATTFQLLIAVILSAQATDKSVNLATRQLFADAPTPQAM 74
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
LA+GE L +YI IG+Y+ K+ N+I+ L+ ++P + L LPG+GRK ANV
Sbjct: 75 LALGESGLADYINRIGLYQGKARNVIATCQQLLARHAGEVPHSRAALEALPGVGRKTANV 134
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AFG TI VDTHIFR++NRIGLA GKTP VE+ LL+ +P + + +AH+WL+LHGR
Sbjct: 135 VLNTAFGEATIAVDTHIFRVANRIGLAAGKTPLAVERQLLQSVPEEFRQSAHHWLILHGR 194
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
YVCKARKP+C C +++LC ++
Sbjct: 195 YVCKARKPECWRCCLADLCAWPEK 218
>gi|195978351|ref|YP_002123595.1| probable endonuclease III [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975056|gb|ACG62582.1| probable endonuclease III [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 220
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L+++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++
Sbjct: 5 RERLKKVLSIIGEMFPEAKGELNWDQEKPFQLLIAVILSAQTTDKAVNKVTPKLWQSYPE 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++N++RTIG+Y+ K++NII + L+ +FD ++P+T + L LPG+GRK
Sbjct: 65 LSDLAQANVSDVENHLRTIGLYKNKAKNIIKTAQQLLIQFDGQVPKTHKELESLPGVGRK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+L+ +G+P I VDTH+ RI+ R+ + AP ++E L+ +P K H+ L
Sbjct: 125 TANVVLAEIYGVPAIAVDTHVSRIAKRLNISAPDADVTEIEADLMAKLPKKDWIITHHRL 184
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GRY C A+ P+C +C + + C K
Sbjct: 185 IFFGRYHCLAKNPKCDTCPVQSYCGYYK 212
>gi|83952520|ref|ZP_00961251.1| endonuclease III [Roseovarius nubinhibens ISM]
gi|83836193|gb|EAP75491.1| endonuclease III [Roseovarius nubinhibens ISM]
Length = 214
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 149/200 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VN+AT+ L+ IADTPQKML
Sbjct: 10 IREIFARFHAAEPEPKGELEHVNAYTLVVAVALSAQATDAGVNRATRALWPIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + L +I+TIG++R+K++N+I +S IL+N++ +P + L LPG+GRK ANV+
Sbjct: 70 DLGLEGLTEHIKTIGLFRQKAKNVIRMSEILVNDYGGVVPNSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G+PT VDTHIFR+ NR G+APGK VE+++ IP +Q++AH+W++LHGRY
Sbjct: 130 LNMWWGLPTQAVDTHIFRVGNRTGIAPGKDVVAVERAIEDQIPADYQHHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +CII +LC+
Sbjct: 190 HCKARKPMCPTCIIRDLCQF 209
>gi|238796526|ref|ZP_04640034.1| Endonuclease III [Yersinia mollaretii ATCC 43969]
gi|238719731|gb|EEQ11539.1| Endonuclease III [Yersinia mollaretii ATCC 43969]
Length = 204
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 95/197 (48%), Positives = 137/197 (69%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+TPQ +L +G
Sbjct: 3 RLRDNDPHPTTELVYTTPFELLISVLLSAQATDVSVNKATAKLYPVANTPQAILDLGVDG 62
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L++YI+TIG++ K+EN+I +L+ + ++P+ L LPG+GRK ANV+L+ AFG
Sbjct: 63 LKSYIKTIGLFNTKAENVIKTCRLLLEKHQGEVPEDRAALEALPGVGRKTANVVLNTAFG 122
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
PTI VDTHIFR+ NR G APG ++VE LL+++P + + + H+WL+LHGRY C ARK
Sbjct: 123 WPTIAVDTHIFRVCNRTGFAPGSNVDQVEAKLLKVVPDEFKLDCHHWLILHGRYTCIARK 182
Query: 211 PQCQSCIISNLCKRIKQ 227
P+C SCII +LC+ ++
Sbjct: 183 PRCGSCIIEDLCEYKEK 199
>gi|71065389|ref|YP_264116.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Psychrobacter arcticus 273-4]
gi|71038374|gb|AAZ18682.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Psychrobacter arcticus 273-4]
Length = 231
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 140/219 (63%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
SK ++P +++ F + P EL Y ++F L++AV+LSAQ+TD
Sbjct: 2 SKTVKHKTADTPPSRRMPNRDIRPFFEKLAATIDEPVTELNYGSNFELLIAVILSAQATD 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
++VN AT L+ +A+TP+ +LA+GE+ L+ YI+ IG++ K++N+I LI +FD+ +
Sbjct: 62 ISVNIATDQLYPVANTPEAILALGEEGLKAYIKNIGLFNAKAKNVIKTCRDLIEKFDSTV 121
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P + L L G+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK VE L+
Sbjct: 122 PDNRKDLESLAGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLATGKNVLIVENKLV 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
IP + +AH++L+LHGRY C+AR P+C +C + + C
Sbjct: 182 ERIPDDYIVDAHHYLILHGRYTCQARTPKCGACPVYDEC 220
>gi|303326362|ref|ZP_07356805.1| endonuclease III [Desulfovibrio sp. 3_1_syn3]
gi|302864278|gb|EFL87209.1| endonuclease III [Desulfovibrio sp. 3_1_syn3]
Length = 227
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
P +++ ++P P+ L N + L+VA +L+AQ TD VN T LF P
Sbjct: 7 RPARAQKVLAALQARYPRPETHLNSHNAWELLVATVLAAQCTDARVNTITPELFRRWPGP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++ +++L+ IR+ G Y K++N++ + + + F+ ++PQ LE L LPG+ RK
Sbjct: 67 AELAGATQEELEEVIRSAGFYHSKAKNLLGAARRVRDHFECRVPQALEHLVTLPGVARKT 126
Query: 141 ANVILSMAFGIPTI-GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L AFGI VDTH+ RIS+R+GL P VE+ L+ + P + + ++ +V
Sbjct: 127 ANVVLFGAFGINEGLAVDTHVKRISHRLGLTDQTDPVAVERDLMALFPQQEWGDVNHRMV 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
GR VC ARKP+C C +++ C R++
Sbjct: 187 WFGRDVCHARKPRCGECEMASFCPRLE 213
>gi|308063625|gb|ADO05512.1| endonuclease III [Helicobacter pylori Sat464]
Length = 218
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKHAKTYQKAQQIKKLLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + + ++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEGVKETIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCGACFLKEFC 210
>gi|257454852|ref|ZP_05620103.1| endonuclease III [Enhydrobacter aerosaccus SK60]
gi|257447785|gb|EEV22777.1| endonuclease III [Enhydrobacter aerosaccus SK60]
Length = 236
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 146/225 (64%), Gaps = 3/225 (1%)
Query: 1 MVSSKKSD---SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLL 57
MV++ K+ +P K + F + P+ EL Y ++F L++AV+L
Sbjct: 1 MVANIKAKTQVPKTAETPPSRRMPNKNVLPFFQKLAAAIEKPETELEYQSNFELLIAVIL 60
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
SAQ+TDV+VN AT+ L+ +A+TPQ +L +GE L++YI+TIG+Y K++N++ L++
Sbjct: 61 SAQATDVSVNLATRKLYAVANTPQAILDLGEAGLKSYIKTIGLYNSKAKNVMKCCQDLVD 120
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+F +++PQT L L G+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK +
Sbjct: 121 KFASEVPQTRHELESLAGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLATGKNVRE 180
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
VE L+ IP + +AH++L+LHGRY CKAR P+C C + N C
Sbjct: 181 VEDKLIARIPQDYILDAHHYLILHGRYTCKARSPECGKCPVFNEC 225
>gi|255020596|ref|ZP_05292659.1| endonuclease III [Acidithiobacillus caldus ATCC 51756]
gi|254969981|gb|EET27480.1| endonuclease III [Acidithiobacillus caldus ATCC 51756]
Length = 219
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/202 (45%), Positives = 134/202 (66%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ F P P+ EL+Y + F L+VAV+LSAQSTD VN + LF A TP
Sbjct: 5 RKQRAARCFAALRAAIPDPRTELHYHSPFQLLVAVVLSAQSTDKAVNLCSAGLFAAAPTP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M +GE+ ++ +IR++G++ K+ ++ +LS L+ FD ++P + E L LPG+GRK
Sbjct: 65 KAMWELGEEGIRAHIRSLGLFNAKARHVHALSGALLQRFDGQVPNSREALESLPGVGRKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L+ FG PTI VDTHIFR++NR+G+APGKTP VE+ LL ++P + +AH+ L+L
Sbjct: 125 ANVVLNTLFGEPTIAVDTHIFRVANRLGIAPGKTPLAVEKGLLEVVPADVRKDAHHLLIL 184
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
HGRY C ARKP+C C + + C
Sbjct: 185 HGRYTCTARKPRCADCALFSCC 206
>gi|70726461|ref|YP_253375.1| endonuclease-like protein [Staphylococcus haemolyticus JCSC1435]
gi|68447185|dbj|BAE04769.1| endonuclease-like protein [Staphylococcus haemolyticus JCSC1435]
Length = 219
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P+ + EL + N F L +AVLLSAQ TD VNK T+ LF+
Sbjct: 1 MISKKKALEMIDVIADMFPNAECELKHDNAFELTIAVLLSAQCTDNLVNKVTRTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ L + ++LQN IR+IG+YR K++NI L L+ +F+ +IP T + L L G+GR
Sbjct: 61 TPQDYLNVDIEELQNDIRSIGLYRNKAKNIQKLCQSLLEQFNGQIPSTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L IIP + +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVTQVEDRLCSIIPKERWSRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLDDCREGQK 210
>gi|60682575|ref|YP_212719.1| putative endonuclease [Bacteroides fragilis NCTC 9343]
gi|60494009|emb|CAH08801.1| putative endonuclease [Bacteroides fragilis NCTC 9343]
Length = 225
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T +++
Sbjct: 1 MTKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPRIYQDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ KS++++ ++ +L+N+F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVNDFNSEVPDTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P VE+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVSNSCTTPFSVEKELMKNIPDELIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C++C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCETCGLQLMCKYY 209
>gi|306820347|ref|ZP_07453986.1| endonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551676|gb|EFM39628.1| endonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 208
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 135/204 (66%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ ++I +P + EL + + + L++A +LSAQSTD VN TK LF++ADTP+ M
Sbjct: 3 KYKKIIDTLKTMYPDARCELNHSSPYELLIATILSAQSTDKRVNIVTKELFKVADTPENM 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+A+GE+KL++YIR+IG Y KS+NII S +I +FD ++P+ ++ LT L G+GRK ANV
Sbjct: 63 VALGEEKLKDYIRSIGFYNAKSKNIILASKDIIEKFDGEVPRDMKDLTSLAGVGRKTANV 122
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
++S F +P I VDTH+FR+++R+G + K +VE L + I K AH+ L+ HGR
Sbjct: 123 VMSNCFDVPAIAVDTHVFRLAHRLGFSDKKDVLQVEYDLQKKIAKKDWTYAHHLLIFHGR 182
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
Y CKA+ P C C +++ C K+
Sbjct: 183 YRCKAQNPACMDCQLNDYCNYYKK 206
>gi|313127105|ref|YP_004037375.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
gi|312293470|gb|ADQ67930.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
Length = 227
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++EEI +P L + L++AV+LSAQ TD VN+ T LFE
Sbjct: 4 SLDTREAQVEEILDRLYEAYPDTTISLNFSTRLELLIAVVLSAQCTDERVNEVTAELFEK 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP+ A ++L + I I + K+ + S+ L+ E D ++P T+ LT L G+
Sbjct: 64 YQTPEDYAAADVEELADDIYGITFHNNKAGYLQSIGETLVEEHDGEVPDTMSELTDLSGV 123
Query: 137 GRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV+L + I VDTH+ R+S R+G+ + P K+EQ L+ ++P
Sbjct: 124 GRKTANVVLQHGHDVVEGIVVDTHVRRLSRRLGITEEERPEKIEQDLMPVVPEADWQQFT 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + HGR VC AR P C C++ +LC K
Sbjct: 184 HLFISHGRAVCDARNPDCDECVLEDLCPSSK 214
>gi|224026016|ref|ZP_03644382.1| hypothetical protein BACCOPRO_02769 [Bacteroides coprophilus DSM
18228]
gi|224019252|gb|EEF77250.1| hypothetical protein BACCOPRO_02769 [Bacteroides coprophilus DSM
18228]
Length = 216
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N F L++AV+LSAQ TD VN T LF
Sbjct: 1 MRKKELYEKVITYFQQAMPVAETELHYENPFQLLIAVILSAQCTDKRVNMITPPLFRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ KS++++ ++ +L+ +F ++P TLE L +LPG+GR
Sbjct: 61 TPEALAASTPEVIFEYIRSVSYPNNKSKHLVGMAQMLVKDFHGEVPDTLEQLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLIKYIPEELIPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRYVC AR P+C+SC ++ LCK
Sbjct: 181 WLILHGRYVCTARSPKCESCGLNGLCK 207
>gi|119026466|ref|YP_910311.1| endonuclease III [Bifidobacterium adolescentis ATCC 15703]
gi|118766050|dbj|BAF40229.1| endonuclease III [Bifidobacterium adolescentis ATCC 15703]
Length = 221
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 16 LGCLYTPKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + + + ++ P PK L + + F L+VA +LSAQ+TD VN T
Sbjct: 1 MPRESKKARIARMHQEYEQLCVEIPDPKCALNFNSPFELLVATVLSAQTTDKRVNMVTPE 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF P ++ A + +++ IRTIG +R K+ NII LSH L F ++P + L
Sbjct: 61 LFGEYPGPAELAAANPEHVEDIIRTIGFFRTKARNIIGLSHELCVRFGGEVPADMASLVS 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIP 187
LPG+GRK ANV+L AFG+P VDTH+ R+ +P P +E+ + P
Sbjct: 121 LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRSDWASPSPDPVAIEREVTACFP 180
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
P+ + + L+LHGR +C ARKP C C +++ C
Sbjct: 181 PEEWTDLSHRLILHGRAICHARKPDCADCPLNDTCP 216
>gi|152990308|ref|YP_001356030.1| endonuclease III [Nitratiruptor sp. SB155-2]
gi|151422169|dbj|BAF69673.1| endonuclease III [Nitratiruptor sp. SB155-2]
Length = 217
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 121/205 (59%), Gaps = 1/205 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ KE++EI +P+ K EL Y N + L+VAV+LSAQ TD VN T LFE
Sbjct: 5 RSEKEIQEIKRRLLEHYPAAKTELKYRNLYELLVAVMLSAQCTDKRVNMITPALFEKYPD 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + ++ I+T + K++N+++++ +++ ++ +IP+T + L +LPG+G+K
Sbjct: 65 IESLAKADVEDVKELIKTCSFFNNKAKNLVAMAKMVMEKYGGEIPETEKELVKLPGVGQK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V++ FG + VDTH+FR+++R+ L+ KT K E+ L++ H +V
Sbjct: 125 TAHVVMIEYFGKNLMAVDTHVFRVAHRLRLSDAKTREKTEEDLVKAF-KTDLAAIHQAMV 183
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRY+C A+ P+C C + +LC
Sbjct: 184 LFGRYICTAKNPKCDQCFLYDLCDS 208
>gi|312137991|ref|YP_004005327.1| endonuclease iii [Rhodococcus equi 103S]
gi|311887330|emb|CBH46641.1| endonuclease III [Rhodococcus equi 103S]
Length = 257
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 102/194 (52%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+P EL + L VA +LSAQ TDV VN+ T LF + +L
Sbjct: 36 LKDAFPHVYCELDFTTPLELTVATILSAQCTDVRVNQVTPALFARYPDARAYAEADRVEL 95
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ YIR+ G YR K+ +II L L+ +D ++P L+ L LPGIGRK ANV+L AFG+
Sbjct: 96 EEYIRSTGFYRNKANSIIGLGQALLERYDGEVPNKLKDLVTLPGIGRKTANVVLGNAFGV 155
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R P KVE ++ +I K + + ++ HGR VC ARKP
Sbjct: 156 PGITVDTHFGRLVRRWKWTEETDPVKVEHAVGALIERKEWTDLSHRVIFHGRRVCHARKP 215
Query: 212 QCQSCIISNLCKRI 225
C C+++ C
Sbjct: 216 ACGVCVLAKDCPSY 229
>gi|317055920|ref|YP_004104387.1| DNA-(apurinic or apyrimidinic site) lyase [Ruminococcus albus 7]
gi|315448189|gb|ADU21753.1| DNA-(apurinic or apyrimidinic site) lyase [Ruminococcus albus 7]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 110/207 (53%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++ ++P L Y L++A LSAQ TD VN TK LF
Sbjct: 1 MTIVQKKDLANKVIERLEEQYPDAICSLEYAQPHELLIATRLSAQCTDARVNIVTKELFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + +++ ++ G+Y+ K+++I + L +E+ +P TLEGLT+L G
Sbjct: 61 KFHSINEFADADIAEIEEIVKPCGLYKTKAKSIKEMCIQLRDEYGGVLPDTLEGLTKLSG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
IGRK AN+I+ + P + DTH RI+ R+GL K P KVE L +I+PP+ +
Sbjct: 121 IGRKTANLIMGDIYHKPAVVTDTHCIRITGRLGLVKNKEPAKVEAELWKILPPEKSSDLC 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ LVL GR C AR P+C C ++++C
Sbjct: 181 HRLVLFGREYCTARSPKCGGCPLNDIC 207
>gi|145596828|ref|YP_001161125.1| endonuclease III [Salinispora tropica CNB-440]
gi|145306165|gb|ABP56747.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Salinispora tropica CNB-440]
Length = 276
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 101/194 (52%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ P EL + N L A +LSAQ TD VN+ T +F +L
Sbjct: 40 LADTHPDAHCELDHSNPLELAAATILSAQCTDKRVNEVTPKVFARYPQAADYAGADRAEL 99
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR+ G YR K++++I L L+ D ++P L L LPGIGRK ANVIL AFG+
Sbjct: 100 EELIRSTGFYRNKADSLIRLGQGLVERHDGQVPGKLTDLVSLPGIGRKTANVILGNAFGV 159
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R GL P K+E ++ + P + + ++ HGR VC+ARKP
Sbjct: 160 PGITVDTHFNRLVRRWGLTTETDPVKIEHAIGALYPKRDWTMLSHRIIFHGRRVCQARKP 219
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 220 ACGACTLAKLCPSY 233
>gi|116511912|ref|YP_809128.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Lactococcus lactis subsp. cremoris SK11]
gi|116107566|gb|ABJ72706.1| DNA-(apurinic or apyrimidinic site) lyase [Lactococcus lactis
subsp. cremoris SK11]
Length = 218
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K E + +P GEL + F L++A +LSAQ+TD VNKAT LF
Sbjct: 1 MLSKKRYLEALAIIEEMFPQAHGELVWETPFQLLIATILSAQATDKGVNKATPALFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---NKIPQTLEGLTRLPG 135
Q M ++++ IRTIG+Y+ K++NI+ S +L+ +F +P+ + L LPG
Sbjct: 61 DAQTMSQAKVEEIEALIRTIGLYKTKAKNILRTSQMLVADFGGILPDLPKDKKLLQTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L+ A+GIP I VDTH+ R+S R+ + A T +VE+ L+++IP +
Sbjct: 121 VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVAQKATVLEVEEKLMKLIPEDKWVQS 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY C A+KP+C C + + CK K+
Sbjct: 181 HHHLIFFGRYHCTAKKPKCAGCPVLDYCKFGKK 213
>gi|225569891|ref|ZP_03778916.1| hypothetical protein CLOHYLEM_05985 [Clostridium hylemonae DSM
15053]
gi|225161361|gb|EEG73980.1| hypothetical protein CLOHYLEM_05985 [Clostridium hylemonae DSM
15053]
Length = 208
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K +EI + ++ L + + + L++A +LSAQ TD VN T+ LF+ +
Sbjct: 2 KKRTKEILEILDEQYGTDFICYLNHDSPWQLLIATMLSAQCTDARVNIVTEGLFKKYTSV 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ K+L+ I+ G Y K+ NII+ + + F ++P+ LE L L G+GRK
Sbjct: 62 EAFAQADLKELEQDIKPTGFYHTKARNIIACMKEIRDRFGGEVPRELEELVSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + P++ VDTH+ RISNR+GL P K+EQ L++ +P H + ++
Sbjct: 122 ANVIRGNIYHEPSVVVDTHVKRISNRLGLTENNDPEKIEQDLMKELPRDHWILYNIQIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR VC ARKP+C+ C + CK K
Sbjct: 182 FGRSVCTARKPKCRDCFLQKYCKEYK 207
>gi|134296515|ref|YP_001120250.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Burkholderia vietnamiensis G4]
gi|134139672|gb|ABO55415.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia
vietnamiensis G4]
Length = 214
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 143/205 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I+ P P EL Y F L++AV+LSAQ+TDV+VNKA + +F +A+T
Sbjct: 1 MNATKRRAIYETLQSLNPHPTTELEYTTSFELLIAVMLSAQATDVSVNKAMRKMFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++++A+GE+ + +YI+TIG+YR K++N+++ HIL+ + ++P E L LPG+GRK
Sbjct: 61 PRQIVALGEEGVADYIKTIGLYRTKAKNVVATCHILLERYGGEVPADREALESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L + P + ++AH+WL+
Sbjct: 121 TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLHDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVCKAR+P+C C I LC+
Sbjct: 181 LHGRYVCKARRPECWHCAIEPLCEF 205
>gi|198276951|ref|ZP_03209482.1| hypothetical protein BACPLE_03156 [Bacteroides plebeius DSM 17135]
gi|198270476|gb|EDY94746.1| hypothetical protein BACPLE_03156 [Bacteroides plebeius DSM 17135]
Length = 221
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +++ F P + EL+Y N F L++AV+LSAQ TD VN T LF
Sbjct: 1 MRKKELYQKVIEYFQTAMPVAETELHYSNPFELLIAVILSAQCTDKRVNMITPPLFRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F + +P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVVFEYIRSVSYPNNKAKHLVGMAQMLVRDFQSTVPDTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPRTCTTPLATEKQLVKYIPESLIPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRYVC AR P+C+SC ++ +CK
Sbjct: 181 WLILHGRYVCTARAPKCESCGLNGICK 207
>gi|259046849|ref|ZP_05737250.1| endonuclease III [Granulicatella adiacens ATCC 49175]
gi|259036472|gb|EEW37727.1| endonuclease III [Granulicatella adiacens ATCC 49175]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/210 (34%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E +P+ EL + F L++A +LSAQ+TD VNK T LF I
Sbjct: 1 MLSKAKTIEAVERMEKLFPNAHCELNHETPFQLLIATILSAQATDKGVNKVTPKLFAIYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ E+ + I+++G+YR K++NI + L+ +++ ++P+T E L L G+GR
Sbjct: 61 NAHALANSEEEVVIECIQSLGLYRNKAKNIRLCAQQLVEKYNGEVPRTREELVSLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AFG+P VDTH+ R+S R+ + + +VE++L + +P AH+W
Sbjct: 121 KTANVVLSVAFGLPAFAVDTHVERVSKRLQICKQSASVLEVEETLCKKLPKNKWGKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+CQ C + +LC ++
Sbjct: 181 MIFFGRYHCTARSPKCQGCPLLDLCAYGQK 210
>gi|169627522|ref|YP_001701171.1| endonuclease III protein [Mycobacterium abscessus ATCC 19977]
gi|169239489|emb|CAM60517.1| Probable endonuclease III protein [Mycobacterium abscessus]
Length = 265
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 110/229 (48%), Gaps = 8/229 (3%)
Query: 4 SKKSDSYQGNSPLGCLYTPK-------ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVL 56
+ S + +P+ + P+ + + +P EL + N L VA +
Sbjct: 10 PRAKSSVKAPAPVRA-WKPETHTGLVRRARRMNRTLAQAFPHVYCELDFTNPLELAVATI 68
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
LSAQ TDV VN T LF T + +L+ IRT G YR K+ +I+ L L+
Sbjct: 69 LSAQCTDVRVNMVTPALFAKYRTAEDYAGANRAELEEMIRTTGFYRNKANSIMGLGTQLV 128
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
F +IP L+ L LPGIGRK ANVIL AF IP I VDTH R+ R + P
Sbjct: 129 ERFGGEIPPRLKDLVTLPGIGRKTANVILGNAFDIPGITVDTHFGRLVRRWRWTEEEDPV 188
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KVE + +I K + ++ HGR VC ARKP C C+++ C
Sbjct: 189 KVEHLVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSY 237
>gi|241668345|ref|ZP_04755923.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876878|ref|ZP_05249588.1| endonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842899|gb|EET21313.1| endonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV+VNKAT+ L++IA+
Sbjct: 1 MNRQKRIQ-IFETWKKNDPHPTTELEYNSNFELLIAVILSAQATDVSVNKATQILYKIAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A+GE+KL YI++IG+Y+ K++N+I+ LI +FD+++P + L L G+GR
Sbjct: 60 TPEAIYALGEQKLAQYIKSIGLYKTKAKNVIATCKDLIEKFDSQVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AF PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ +AH+W+
Sbjct: 120 KTANVVLNTAFNQPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLQDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A+KP+C++CII C+ +
Sbjct: 180 ILHGRYICTAQKPKCRNCIIFQYCEFKDK 208
>gi|218442082|ref|YP_002380411.1| endonuclease III [Cyanothece sp. PCC 7424]
gi|218174810|gb|ACK73543.1| endonuclease III [Cyanothece sp. PCC 7424]
Length = 221
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI +P L Y L+VA +LSAQ TD VN+ T +LF
Sbjct: 12 KRALEILATLEHLYPEATCSLTYETPVQLLVATILSAQCTDERVNQVTPNLFARFPDASS 71
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + L+ IR+ G YR K++NI +++EF ++PQ +E L LPG+ RK AN
Sbjct: 72 LANAPREDLEILIRSTGFYRNKAKNIQGACQKIVSEFGGEVPQQMEKLLSLPGVARKTAN 131
Query: 143 VILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+L+ FGI + VDTH+ R+S R+GL P K+E+ L+ ++P N ++ H
Sbjct: 132 VVLAHGFGIIQGVTVDTHVKRLSGRLGLTKETDPIKIERDLMTLLPQPDWENFSIRIIYH 191
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GR VCKARKP C C +++LC
Sbjct: 192 GRAVCKARKPDCDRCKLAHLCPS 214
>gi|172036183|ref|YP_001802684.1| endonuclease III [Cyanothece sp. ATCC 51142]
gi|171697637|gb|ACB50618.1| endonuclease III [Cyanothece sp. ATCC 51142]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 19 LYTP---KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ TP K+ EI + +P L Y + L+VA +LSAQ TD VNK T LF
Sbjct: 1 MKTPNQLKKALEILKILKQLYPDATCSLTYDSPVQLLVATILSAQCTDERVNKVTPELFT 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + L+ +IR+ G YR K++NI ++ +F+ ++PQT+E L LPG
Sbjct: 61 QFPDAKGLANADREVLETWIRSTGFYRNKAKNIQGACQKIVADFNGQVPQTMEELLLLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ RK ANV+L+ AFGI + VDTH+ R+S R+GL P K+E+ L+ ++P K N
Sbjct: 121 VARKTANVVLAHAFGINAGVTVDTHVKRLSQRLGLTKATDPVKIEKDLMALLPQKDWENF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ HGR +CKAR P CQ C +++LC
Sbjct: 181 SIRIIYHGRQICKARTPNCQDCKLAHLC 208
>gi|149174185|ref|ZP_01852813.1| endonuclease III [Planctomyces maris DSM 8797]
gi|148847165|gb|EDL61500.1| endonuclease III [Planctomyces maris DSM 8797]
Length = 240
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K +I + +P P+ L + + F L+VA +LSAQ TD VN T LF+ T
Sbjct: 28 KKKHARKIARGLARLFPEPECALIHDSPFQLLVATILSAQCTDERVNATTPTLFKKYPTA 87
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K+ + ++ + +G +R K+ NI ++ + ++ +IP+TL+ L LPG+GRK
Sbjct: 88 EKLSTSKQADVEKIVYPLGFFRAKATNIRKMALAVTEQYAGEIPRTLKELVALPGVGRKT 147
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L AFGIP+ + VDTH+ RI N GL K P +E+ L+ ++P K + ++
Sbjct: 148 ANVVLGTAFGIPSGVVVDTHVKRICNIFGLTTSKNPEIIERDLMEVLPKKEWIAFSHRVI 207
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
LHGR C ARKP+C C + +C RI
Sbjct: 208 LHGRATCVARKPRCTECSLLKICPRI 233
>gi|225677186|ref|ZP_03788182.1| endonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225590773|gb|EEH12004.1| endonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 115/211 (54%), Positives = 153/211 (72%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++E IF F P+PK EL Y NHFTL+VA++LSA++TDV+VNK T+ LF IADT
Sbjct: 1 MDSKKVELIFEKFQQSNPAPKIELNYTNHFTLLVAIVLSARTTDVSVNKITRELFNIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML+ G+ +L+ I +IG+Y K++NII LS IL+ +++K+P + L LPG+GRK
Sbjct: 61 PEKMLSFGQSELKKCISSIGLYNSKAKNIIGLSKILVERYNSKVPTNFDDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ GIPT+ VDTH+FR+SNRIGL K K EQSLL ++P K+ AH+WLV
Sbjct: 121 SANVFLNSGLGIPTLAVDTHVFRVSNRIGLVKEKDVFKTEQSLLNVVPKKYLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNL----CKRIK 226
LHGRYVCKA+KP C++CII +L CKR K
Sbjct: 181 LHGRYVCKAQKPSCETCIIHDLCEFECKRYK 211
>gi|125624307|ref|YP_001032790.1| putative endonuclease III (DNA repair) [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493115|emb|CAL98079.1| putative endonuclease III (DNA repair) [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071089|gb|ADJ60489.1| putative endonuclease III (DNA repair) [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 218
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K E + +P GEL + F L++A +LSAQ+TD VNKAT LF
Sbjct: 1 MLSKKRYLEALAIIEEMFPQAHGELVWETPFQLLIATILSAQATDKGVNKATPALFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---NKIPQTLEGLTRLPG 135
Q M ++++ IRTIG+Y+ K++NI+ S +L+ +F +P+ + L LPG
Sbjct: 61 DAQAMSQAKVEEIEALIRTIGLYKTKAKNILRTSQMLVADFGGILPDLPKDKKLLQTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L+ A+GIP I VDTH+ R+S R+ + A T +VE+ L+++IP +
Sbjct: 121 VGRKTANVVLAEAYGIPGIAVDTHVERVSKRLDIVAQKATVLEVEEKLMKLIPEDKWVQS 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY C A+KP+C C + + CK K+
Sbjct: 181 HHHLIFFGRYHCTAKKPKCAGCPVLDYCKFGKK 213
>gi|313765321|gb|EFS36685.1| endonuclease III [Propionibacterium acnes HL013PA1]
gi|313772765|gb|EFS38731.1| endonuclease III [Propionibacterium acnes HL074PA1]
gi|313793212|gb|EFS41279.1| endonuclease III [Propionibacterium acnes HL110PA1]
gi|313802823|gb|EFS44039.1| endonuclease III [Propionibacterium acnes HL110PA2]
gi|313806740|gb|EFS45245.1| endonuclease III [Propionibacterium acnes HL087PA2]
gi|313811243|gb|EFS48957.1| endonuclease III [Propionibacterium acnes HL083PA1]
gi|313813975|gb|EFS51689.1| endonuclease III [Propionibacterium acnes HL025PA1]
gi|313815399|gb|EFS53113.1| endonuclease III [Propionibacterium acnes HL059PA1]
gi|313817509|gb|EFS55223.1| endonuclease III [Propionibacterium acnes HL046PA2]
gi|313821275|gb|EFS58989.1| endonuclease III [Propionibacterium acnes HL036PA1]
gi|313824781|gb|EFS62495.1| endonuclease III [Propionibacterium acnes HL036PA2]
gi|313826442|gb|EFS64156.1| endonuclease III [Propionibacterium acnes HL063PA1]
gi|313828839|gb|EFS66553.1| endonuclease III [Propionibacterium acnes HL063PA2]
gi|313832249|gb|EFS69963.1| endonuclease III [Propionibacterium acnes HL007PA1]
gi|313834261|gb|EFS71975.1| endonuclease III [Propionibacterium acnes HL056PA1]
gi|313840361|gb|EFS78075.1| endonuclease III [Propionibacterium acnes HL086PA1]
gi|314916462|gb|EFS80293.1| endonuclease III [Propionibacterium acnes HL005PA4]
gi|314917305|gb|EFS81136.1| endonuclease III [Propionibacterium acnes HL050PA1]
gi|314921678|gb|EFS85509.1| endonuclease III [Propionibacterium acnes HL050PA3]
gi|314926510|gb|EFS90341.1| endonuclease III [Propionibacterium acnes HL036PA3]
gi|314930675|gb|EFS94506.1| endonuclease III [Propionibacterium acnes HL067PA1]
gi|314955209|gb|EFS99614.1| endonuclease III [Propionibacterium acnes HL027PA1]
gi|314959400|gb|EFT03502.1| endonuclease III [Propionibacterium acnes HL002PA1]
gi|314961586|gb|EFT05687.1| endonuclease III [Propionibacterium acnes HL002PA2]
gi|314964624|gb|EFT08724.1| endonuclease III [Propionibacterium acnes HL082PA1]
gi|314969331|gb|EFT13429.1| endonuclease III [Propionibacterium acnes HL037PA1]
gi|314974356|gb|EFT18451.1| endonuclease III [Propionibacterium acnes HL053PA1]
gi|314977011|gb|EFT21106.1| endonuclease III [Propionibacterium acnes HL045PA1]
gi|314979997|gb|EFT24091.1| endonuclease III [Propionibacterium acnes HL072PA2]
gi|314985351|gb|EFT29443.1| endonuclease III [Propionibacterium acnes HL005PA1]
gi|314987412|gb|EFT31503.1| endonuclease III [Propionibacterium acnes HL005PA2]
gi|314989222|gb|EFT33313.1| endonuclease III [Propionibacterium acnes HL005PA3]
gi|315078753|gb|EFT50777.1| endonuclease III [Propionibacterium acnes HL053PA2]
gi|315082174|gb|EFT54150.1| endonuclease III [Propionibacterium acnes HL078PA1]
gi|315082681|gb|EFT54657.1| endonuclease III [Propionibacterium acnes HL027PA2]
gi|315086431|gb|EFT58407.1| endonuclease III [Propionibacterium acnes HL002PA3]
gi|315087918|gb|EFT59894.1| endonuclease III [Propionibacterium acnes HL072PA1]
gi|315097191|gb|EFT69167.1| endonuclease III [Propionibacterium acnes HL038PA1]
gi|315099525|gb|EFT71501.1| endonuclease III [Propionibacterium acnes HL059PA2]
gi|315102247|gb|EFT74223.1| endonuclease III [Propionibacterium acnes HL046PA1]
gi|315106254|gb|EFT78230.1| endonuclease III [Propionibacterium acnes HL030PA1]
gi|315109873|gb|EFT81849.1| endonuclease III [Propionibacterium acnes HL030PA2]
gi|327331293|gb|EGE73032.1| endonuclease III [Propionibacterium acnes HL096PA2]
gi|327333926|gb|EGE75643.1| endonuclease III [Propionibacterium acnes HL096PA3]
gi|327444604|gb|EGE91258.1| endonuclease III [Propionibacterium acnes HL013PA2]
gi|327447328|gb|EGE93982.1| endonuclease III [Propionibacterium acnes HL043PA1]
gi|327450483|gb|EGE97137.1| endonuclease III [Propionibacterium acnes HL043PA2]
gi|327454494|gb|EGF01149.1| endonuclease III [Propionibacterium acnes HL087PA3]
gi|327456563|gb|EGF03218.1| endonuclease III [Propionibacterium acnes HL083PA2]
gi|327457162|gb|EGF03817.1| endonuclease III [Propionibacterium acnes HL092PA1]
gi|328756258|gb|EGF69874.1| endonuclease III [Propionibacterium acnes HL087PA1]
gi|328758108|gb|EGF71724.1| endonuclease III [Propionibacterium acnes HL020PA1]
gi|328761201|gb|EGF74743.1| endonuclease III [Propionibacterium acnes HL099PA1]
Length = 242
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 105/203 (51%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL Y + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 23 ANEVRALLAKAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 83 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVV 142
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 143 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 202
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 203 RCHSRRPACGVCPVAEWCPSFGE 225
>gi|160888808|ref|ZP_02069811.1| hypothetical protein BACUNI_01226 [Bacteroides uniformis ATCC 8492]
gi|270293583|ref|ZP_06199785.1| endonuclease III [Bacteroides sp. D20]
gi|317479451|ref|ZP_07938583.1| endonuclease III [Bacteroides sp. 4_1_36]
gi|156861707|gb|EDO55138.1| hypothetical protein BACUNI_01226 [Bacteroides uniformis ATCC 8492]
gi|270275050|gb|EFA20910.1| endonuclease III [Bacteroides sp. D20]
gi|316904351|gb|EFV26173.1| endonuclease III [Bacteroides sp. 4_1_36]
Length = 224
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+I F P + EL+Y N F L++AV+LSAQ TD VN T L+
Sbjct: 1 MRKKERYEKILAWFRENVPVAETELHYDNPFELLIAVILSAQCTDKRVNMITPALYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + YIR++ K+++++ ++ +L+ EF++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPDVVYEYIRSVSYPNNKAKHLVGMAQMLVKEFNSEVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDKCTTPFSVEKELVKHIPETDIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC +C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDTCGLQLMCKYY 209
>gi|255262540|ref|ZP_05341882.1| endonuclease III [Thalassiobium sp. R2A62]
gi|255104875|gb|EET47549.1| endonuclease III [Thalassiobium sp. R2A62]
Length = 214
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 145/200 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F PKGEL++VN +TL+VAV LSAQ+TD VN+AT LF +ADTPQKML
Sbjct: 10 IREIFTRFQTAEAEPKGELHHVNAYTLVVAVALSAQATDAGVNRATGPLFSVADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + + +YI+TIG++R K++N+I LS IL++++D +P + L LPG+GRK ANV+
Sbjct: 70 DLGLETVTDYIKTIGLFRNKAKNVIKLSQILVDDYDGVVPNSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P VDTHIFR NR G+APGK VE+++ IP Q +AH+W++LHGRY
Sbjct: 130 LNMWWGQPAQAVDTHIFRFGNRSGVAPGKDVVAVERAIEDHIPADFQLHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
VCKARKP C +C+I +LC+
Sbjct: 190 VCKARKPMCGACLIRDLCEF 209
>gi|297379786|gb|ADI34673.1| endonuclease III [Helicobacter pylori v225d]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++I L +P+ +L++ N + L+VA +LSAQ TD VNK T LFE +
Sbjct: 3 LKRAKAQQIKELLLKYYPNQTTQLHHKNPYELLVATILSAQCTDARVNKITPKLFEKYPS 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++++ I+++ KS+++IS++ ++ +F IP T + L L G+G+K
Sbjct: 63 VKDLALASLEEVKETIKSVSYSNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDGVGQK 122
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H+ L+
Sbjct: 123 TANVVLSVCFDANCIAVDTHVFRTTHRLGLSDANTPIKTEEELSDLF-KDNLSKLHHALI 181
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
L GRY CKA+ P C +C + C
Sbjct: 182 LFGRYTCKAKNPLCGACFLKEFC 204
>gi|290968835|ref|ZP_06560372.1| endonuclease III [Megasphaera genomosp. type_1 str. 28L]
gi|290781131|gb|EFD93722.1| endonuclease III [Megasphaera genomosp. type_1 str. 28L]
Length = 214
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 127/206 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T ++I F ++ K L+Y F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MITKAVKQQILQRFQDRYGILKPALHYTTPFELLVAVVLSAQCTDERVNSVTAGLFPKYG 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++ML +G L+ I T G+Y K++NI++ +L ++ +P+T E L LPG+GR
Sbjct: 61 TPERMLTLGLTGLEEKIHTCGLYHNKAKNILATCAVLCEKYQGCVPRTFEELVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV++S+ F P I VDTH+FR+SNR+ LA G TP VE+ L ++IP AH+WL
Sbjct: 121 KTANVLISILFQTPAIAVDTHVFRVSNRLQLAVGTTPLAVEKGLQKVIPEPWWSRAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR VCKARKP C C +++LC
Sbjct: 181 IWHGRKVCKARKPLCDQCFLADLCPF 206
>gi|229495325|ref|ZP_04389060.1| endonuclease III [Porphyromonas endodontalis ATCC 35406]
gi|229317768|gb|EEN83666.1| endonuclease III [Porphyromonas endodontalis ATCC 35406]
Length = 217
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I F P + EL+Y + + L+VAV+LSAQ TD VN T LF
Sbjct: 1 MTKKERFEGILAWFGENMPVAETELHYRSPYELLVAVMLSAQCTDKRVNIVTPALFAALP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M ++++ I++I K+E++ ++ ++ F IP T E L LPG+GR
Sbjct: 61 TVEAMAQASQEEILALIKSISYPNSKAEHLSKMAQRVVQTFGGSIPATREELMTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANVIL++ + PT+ VDTH+FR+S RIGL KTP E +L+R IPP+ AH+W
Sbjct: 121 KTANVILAVLYNQPTMAVDTHVFRVSERIGLTTRAKTPLDTELTLVRYIPPELIPKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRYVC AR P+C SC I++ C+ ++
Sbjct: 181 LILHGRYVCLARSPKCSSCGITSWCRYAQK 210
>gi|303257805|ref|ZP_07343815.1| endonuclease III [Burkholderiales bacterium 1_1_47]
gi|302859408|gb|EFL82489.1| endonuclease III [Burkholderiales bacterium 1_1_47]
Length = 227
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P+PK EL Y ++F L++AV+LSAQ+TD +VN+AT+ LF +A+T
Sbjct: 1 MNQEKRLEILKALQADNPTPKTELEYHSNFELLIAVVLSAQATDKSVNEATRVLFPLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +K + I+ IG+YR K++N++ L LI + ++P + L +LPG+G+K
Sbjct: 61 PQAVLDLGPEKFTDIIKHIGLYRSKTKNVMKLCEDLIEHHNGQVPTDFDSLIKLPGVGQK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V++++AF PTI VDTH+FR++NR G A GKTP V++ + R P ++ +AH+W +
Sbjct: 121 TASVVMNVAFEKPTIAVDTHVFRVANRTGYAKGKTPEIVQKKMERYTPLPYRADAHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+CKARKP+C C I C+ ++
Sbjct: 181 LLGRYICKARKPECWKCPIEQYCEYKEK 208
>gi|254512387|ref|ZP_05124454.1| endonuclease III [Rhodobacteraceae bacterium KLH11]
gi|221536098|gb|EEE39086.1| endonuclease III [Rhodobacteraceae bacterium KLH11]
Length = 214
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 108/200 (54%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTPQKML
Sbjct: 10 IREIFTRFQDADPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRTLFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L +I+TIG++R+K++N+I LS IL+ ++ ++P + L LPG+GRK ANV+
Sbjct: 70 DLGEEGLIEHIKTIGLFRQKAKNVIKLSRILVEDYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRQPAQAVDTHIFRVGNRTGICPGKNVDAVERAIEDNIPADFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKPQC +CII +LC+
Sbjct: 190 HCKARKPQCPTCIIRDLCQF 209
>gi|255280265|ref|ZP_05344820.1| endonuclease III [Bryantella formatexigens DSM 14469]
gi|255269356|gb|EET62561.1| endonuclease III [Bryantella formatexigens DSM 14469]
Length = 239
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
G + + EI ++P L Y + L+V+V L+AQ TD VN LF
Sbjct: 25 EGKMIKKELALEIIERLKKEYPDAGCTLDYDEAWKLLVSVRLAAQCTDARVNIVVADLFV 84
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+++ + ++ ++ G+ K+ +I + +L ++D KIP+ + L +LPG
Sbjct: 85 KYPGVKELAEADVEDIERIVKPCGLGHSKARDISACMKMLQEQYDGKIPEDFDALLKLPG 144
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNA 194
+GRK AN+I+ FG P I DTH R+ NR+GL G P KVE L +IIPP+ +
Sbjct: 145 VGRKSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMELWKIIPPEEGSDF 204
Query: 195 HYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ LV HGR +C AR KP C C + ++CK+
Sbjct: 205 CHRLVYHGREICTARTKPYCDRCCLQDICKK 235
>gi|254168132|ref|ZP_04874979.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|197622898|gb|EDY35466.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
Length = 211
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ ++ + P F +++A ++S ++ D + LF
Sbjct: 1 MVKDEDIGKVIEILRANVP--PHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLFGKYP 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + + + I G Y +K++ I ++ I+ ++D K+P LE L +LPG+GR
Sbjct: 59 LPRDLKNAPTDDIAHLIYPAGFYNQKAKKIKEIAKIIDEDYDGKVPDNLEDLLKLPGVGR 118
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++LS + I VDTH+ RISNR+G KTP + E+ L++++P K+ + + L
Sbjct: 119 KTANIVLSRCYDKDVIAVDTHVHRISNRLGWVNTKTPEETERELMKVLPKKYWKDINELL 178
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V+ GR +C+ P+C C I CK K+
Sbjct: 179 VMFGRTICRPVAPKCDVCPIKKYCKYYKE 207
>gi|88809623|ref|ZP_01125130.1| endonuclease III [Synechococcus sp. WH 7805]
gi|88786373|gb|EAR17533.1| endonuclease III [Synechococcus sp. WH 7805]
Length = 217
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 112/201 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MKKRERAAVVLERLNAHYPEPPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A+ E ++ ++IR +G+ + KS N+ L+HIL+N ++P + E L LPG+G
Sbjct: 61 TPEAMAALEESEILSHIRQLGLAKTKSRNVHKLAHILVNVHAGQVPASFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + E+ L + P H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGDSVAQTEKDLKSLFPKDAWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGRDHCTARGCDGTVCPLC 201
>gi|78188394|ref|YP_378732.1| endonuclease III/Nth [Chlorobium chlorochromatii CaD3]
gi|78170593|gb|ABB27689.1| DNA-(apurinic or apyrimidinic site) lyase [Chlorobium
chlorochromatii CaD3]
Length = 208
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 133/206 (64%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + L S ++P+PK EL Y++ F L++A +L+AQ+TD VN T+ LF+ A
Sbjct: 1 MNPQEKIIALHDLLSKQFPNPKSELEYLSPFQLLIATILAAQATDKQVNVITRELFKRAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M + +++ Y+RTI + K++NI+ +S L+ F ++PQ E L LPG+GR
Sbjct: 61 DAITMSRMELEEITGYVRTINYFNNKAKNILEVSRRLVEHFGGEVPQEREALESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG+P + VDTH+ R+SNRIGL K E++L+ IIP + H++L
Sbjct: 121 KTANVVLANAFGMPVMAVDTHVHRVSNRIGLVSTKKVEATEEALMAIIPEAWVADFHHYL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+LHGRY CKA+KP C +C ++++C
Sbjct: 181 LLHGRYTCKAKKPACPTCTVAHICDF 206
>gi|291549056|emb|CBL25318.1| Predicted EndoIII-related endonuclease [Ruminococcus torques L2-14]
Length = 211
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKKQRALEVIERLKKEYPDAGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEGLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + + ++ +R G+ + K+ +I + +L +E+ K+P L +LPG+GR
Sbjct: 61 TVEALADAPVEDIEEIVRPCGLGKSKARDISACMKMLRDEYGGKVPDDFGALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R++NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLTNRIGLVDGIKEPKKVEMALWKIIPPEEGSDLCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
LV HGR +C AR KP C C ++++CK++
Sbjct: 181 LVYHGREICTARTKPYCDRCCLADVCKKV 209
>gi|332978351|gb|EGK15076.1| endonuclease III [Psychrobacter sp. 1501(2011)]
Length = 231
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 140/213 (65%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+P + + F + P EL Y ++F L++AV+LSAQ+TDV+VN A
Sbjct: 8 KTAETPPSRRLPNRNVRPFFEKLAAAIDEPVTELEYNSNFELLIAVILSAQATDVSVNLA 67
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T+ L+ +A+TP+ + A+GE+ L++YI+TIG+Y K++N+I LI + ++++P +
Sbjct: 68 TRKLYAVANTPEAIYALGEEGLKDYIKTIGLYNSKAKNVIKACKDLIEKHNSQVPDNRKD 127
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L L G+GRK ANV+L+ AFG PT+ VDTHIFR+SNR GLA GKT VEQ L+ IP
Sbjct: 128 LEALAGVGRKTANVVLNTAFGQPTMAVDTHIFRVSNRTGLATGKTVLAVEQKLVERIPED 187
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ +AH++L+LHGRY C+AR P+C +C + C
Sbjct: 188 YILDAHHYLILHGRYTCQARTPKCGACPVYEEC 220
>gi|289582883|ref|YP_003481349.1| endonuclease III [Natrialba magadii ATCC 43099]
gi|289532436|gb|ADD06787.1| endonuclease III [Natrialba magadii ATCC 43099]
Length = 227
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ EE+ +P L Y N L++AV+LSAQ TD VN TKHLFE D P
Sbjct: 8 RTEQAEELVDRLEEAYPDSTISLRYSNRLELLIAVILSAQCTDERVNTETKHLFEKYDGP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E++L + +I Y K+ I +++ E D ++P T+ LT L G+GRK
Sbjct: 68 EDYANVPEEELAEDLSSITYYNSKAGYIKDSCEMILEEHDGEVPDTMSELTELSGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ R+S R+GL + P +EQ L+ ++P + + +
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTEEEYPEPIEQELMDLVPEGYWQQFTHLCI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C AR P C C+++++C K
Sbjct: 188 DHGRATCTARNPDCSDCVLADICPSEK 214
>gi|126734946|ref|ZP_01750692.1| endonuclease III [Roseobacter sp. CCS2]
gi|126715501|gb|EBA12366.1| endonuclease III [Roseobacter sp. CCS2]
Length = 214
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 106/198 (53%), Positives = 143/198 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ IF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTPQKML
Sbjct: 10 IRNIFERFHAAEPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + +IRTIG+YR K++N+I +S IL++E+ +P + L LPG+GRK ANV+
Sbjct: 70 DLGLDGVTEHIRTIGLYRNKAKNVIKMSQILVDEYGGVVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P VDTHIFR NR G+APGK + VE+++ IP Q +AH+W++LHGRY
Sbjct: 130 LNMWWGQPAQAVDTHIFRFGNRSGVAPGKDVDAVERAIEDHIPADFQLHAHHWMILHGRY 189
Query: 205 VCKARKPQCQSCIISNLC 222
VC ARKP+C +C+I +LC
Sbjct: 190 VCVARKPKCAACLIRDLC 207
>gi|148239134|ref|YP_001224521.1| endonuclease III [Synechococcus sp. WH 7803]
gi|147847673|emb|CAK23224.1| Endonuclease III [Synechococcus sp. WH 7803]
Length = 217
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 114/201 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MKKHERAAVVLERLNAHYPEPPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A+ E ++ ++IR +G+ + KS+N+ L+HIL+N ++P + E L LPG+G
Sbjct: 61 TPEAMAALNENEILSHIRQLGLAKTKSKNVHKLAHILVNVHAGQVPASFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G++ E+ L ++ P H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGESVATTEKDLKKLFPKDSWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTVCPLC 201
>gi|116075469|ref|ZP_01472729.1| endonuclease III [Synechococcus sp. RS9916]
gi|116067666|gb|EAU73420.1| endonuclease III [Synechococcus sp. RS9916]
Length = 217
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 112/202 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MKKRERAQRILQRLEETYPETPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A+ E+ + N+IR +G+ + K+ N+ L+ IL+ +D ++P + E L LPG+G
Sbjct: 61 TPAAMAALDEETILNHIRQLGLAKTKARNVKKLAQILVTAYDGEVPASFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + E+ L ++ P + H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGDSVQRTERDLKQLFPEEAWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTVCPLCT 202
>gi|146329871|ref|YP_001209459.1| endonuclease III [Dichelobacter nodosus VCS1703A]
gi|146233341|gb|ABQ14319.1| endonuclease III [Dichelobacter nodosus VCS1703A]
Length = 209
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 93/203 (45%), Positives = 138/203 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ F + P+P EL Y NHF L++AV+LSAQ+TD +VNK T LF+ A+T
Sbjct: 1 MNAADIVTFFERLKAENPNPNSELVYRNHFELLIAVMLSAQATDASVNKVTAKLFQYANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ LA+GE +L+N I++IG++ K+ NI+ IL+ ++ ++P + E L L G+GRK
Sbjct: 61 PEAFLALGETRLKNAIKSIGLFNTKAANILKTCRILVEKYGGEVPCSREDLESLAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG I VDTH+FR++NR GLA GKT VE L++ +P + +AH+WL+
Sbjct: 121 TANVVLNTAFGAKVIAVDTHVFRVANRTGLAVGKTVAAVEAGLMKNVPDAYLLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C+AR P CQ C++++LC
Sbjct: 181 LHGRYTCRARNPLCQHCVVADLC 203
>gi|328906746|gb|EGG26518.1| putative endonuclease III [Propionibacterium sp. P08]
Length = 262
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 108/203 (53%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++ + + +P EL+Y + L+VA +LSAQ+TD VN T LF Q +
Sbjct: 43 ANKVVSVLAKAYPDACCELHYDGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPDTQTLA 102
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++E ++S++ L+++FD +P L+ L LPG+GRK ANV+
Sbjct: 103 DADVGEVEAVVAPLGFGPTRAERLVSMATQLVDDFDGVVPDDLDSLVTLPGVGRKTANVV 162
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L A+G+P I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 163 LGNAYGVPGITPDTHVMRVSRRLGWTDATTPAKVEVDLAELFDPSEWVMLCHRLIWHGRR 222
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 223 SCHSRRPACGVCPVAEWCPSFGE 245
>gi|228476057|ref|ZP_04060765.1| endonuclease III [Staphylococcus hominis SK119]
gi|228269880|gb|EEK11360.1| endonuclease III [Staphylococcus hominis SK119]
Length = 223
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD VNK T+ LF+
Sbjct: 1 MVSKKKALEMIDVVADMFPDAECELKHDNPFELAIAVLLSAQCTDNLVNKVTRSLFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQN I++IG+YR K++NI L L++++ ++P T + L L G+GR
Sbjct: 61 TPEDYLKVDIEELQNDIKSIGLYRNKAKNIKKLCQSLLDQYGGQVPHTHKDLESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE+ L IIP + +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINKWKDNVKQVEERLCDIIPKERWSKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCIARKPKCDICPLLEDCREGQK 210
>gi|85059427|ref|YP_455129.1| endonuclease III [Sodalis glossinidius str. 'morsitans']
gi|84779947|dbj|BAE74724.1| endonuclease III [Sodalis glossinidius str. 'morsitans']
Length = 212
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P P EL Y + F L++AVLLSAQ+TDV+VNKATK LF ADT
Sbjct: 1 MNKSKRYDILCRLRANNPHPTTELMYRSPFELLIAVLLSAQATDVSVNKATKLLFPAADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ MLA+G + ++ YI++IG++ K+ENII +L+ ++PQ L LPG+GRK
Sbjct: 61 PQAMLALGVEGVKGYIKSIGLFNSKAENIIKTCRLLLERHQGEVPQDRTALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR A GK VEQ LL ++P + + + H+W +
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVANRTRFAVGKDVEAVEQKLLAVVPGEFKVDCHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 181 LHGRYTCIARKPRCGSCLIEDLCEYDQK 208
>gi|332140728|ref|YP_004426466.1| Endonuclease III/Nth [Alteromonas macleodii str. 'Deep ecotype']
gi|327550750|gb|AEA97468.1| Endonuclease III/Nth [Alteromonas macleodii str. 'Deep ecotype']
Length = 237
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 114/203 (56%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +++ EI + +P L + + +TL++AVLLSAQ TD VN+ T LF
Sbjct: 5 VKPISKQEKVREIMRILDELYPEVPIFLDHKDPYTLLIAVLLSAQCTDERVNQITPKLFA 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
AD P M+ + +++Q+ IR G+ KS+ I LS ++I + + ++P + E L +P
Sbjct: 65 RADNPYDMVMMTIEEIQDIIRPCGLSPMKSKGIWHLSDMIIKQHNGEVPASFEALEAMPA 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G K A V++S FGIP VDTHI R+ R GL+ GK+ + E+ R+ P + + H
Sbjct: 125 VGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPKERWNDLH 184
Query: 196 YWLVLHGRYVCKARKPQCQSCII 218
++L+GR C AR CII
Sbjct: 185 LQIILYGREYCPARGFDLNKCII 207
>gi|315586730|gb|ADU41111.1| DNA-(apurinic or apyrimidinic site) lyase [Helicobacter pylori 35A]
Length = 218
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRAKTYQKAQQIKKLLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ + KS+++IS++ ++ +F IP T + L L G
Sbjct: 65 KYSSVKDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C +C + C
Sbjct: 184 HALILFGRYTCKAKNPLCSACFLKEFC 210
>gi|58584622|ref|YP_198195.1| EndoIII-related endonuclease [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58418938|gb|AAW70953.1| Predicted EndoIII-related endonuclease [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 212
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 111/211 (52%), Positives = 150/211 (71%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++E IF P PK EL Y NHFTL+VA++LSA++TDV+VNK TK LF IA+T
Sbjct: 1 MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML +G+ +L+ +I +IG+Y K++NII LS IL+ +K+P + L LPG+GRK
Sbjct: 61 PEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ GIPT+ VDTH+FR+SN+IGL K K E+SLL ++P K+ AH+WLV
Sbjct: 121 SANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKDVFKTEKSLLNVVPKKYLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNL----CKRIK 226
LHGRYVCKA+KP C++CII +L CKR K
Sbjct: 181 LHGRYVCKAQKPSCKTCIIHDLCEFECKRYK 211
>gi|145220270|ref|YP_001130979.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Prosthecochloris vibrioformis DSM 265]
gi|145206434|gb|ABP37477.1| DNA-(apurinic or apyrimidinic site) lyase [Chlorobium
phaeovibrioides DSM 265]
Length = 214
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 126/203 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++++ + + ++P P+ EL + + F L++A +L+AQ+TD VN T+ LF A +
Sbjct: 6 KEKIKFLKEVLGTRYPEPRSELLFESPFQLLIATILAAQATDRQVNIITRELFRAAPDAK 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + + + +R+I K++NI S+S IL ++ K+P+T E L +LPG+GRK A
Sbjct: 66 SLSLLEPESILKLVRSINYCNNKAKNIRSVSIILTEQYAGKVPETREELEKLPGVGRKTA 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+L+ AF P + VDTH+ R+SNR+GL + E +L+ IIP + H++L+LH
Sbjct: 126 NVVLAAAFHQPVMPVDTHVHRVSNRLGLCHTSKVEETEAALIAIIPEPWVVDFHHYLLLH 185
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GRY CKA+KP C +C ++ +C
Sbjct: 186 GRYTCKAKKPDCSTCPLATICPS 208
>gi|187931879|ref|YP_001891864.1| endonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712788|gb|ACD31085.1| endonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 212
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 157/209 (75%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF ++ P P EL Y ++F L++AV+LSAQ+TDV VNKATK LF++A+
Sbjct: 1 MNKQKRIQ-IFEIWKQNDPKPTTELEYTSNFELLIAVILSAQATDVGVNKATKVLFKVAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ A+GE+KL YI++IG+Y+ K++N+I+ LI +FD+ +P + L L G+GR
Sbjct: 60 TPEQIYALGEQKLAEYIKSIGLYKTKAKNVIATCKDLIEKFDSIVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR++NRI LA GK N+VE+ LLR+IP ++ ++AH+W+
Sbjct: 120 KTANVVLNTAFGKPTMAVDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLHDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGR++C A++P+C++CII + C+ +
Sbjct: 180 ILHGRHICTAQRPRCRNCIIYDYCEFKDK 208
>gi|238786054|ref|ZP_04630013.1| Endonuclease III [Yersinia bercovieri ATCC 43970]
gi|238713030|gb|EEQ05083.1| Endonuclease III [Yersinia bercovieri ATCC 43970]
Length = 204
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 95/197 (48%), Positives = 137/197 (69%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+TPQ +L +G
Sbjct: 3 RLRDNDPHPTTELVYTTPFELLISVLLSAQATDVSVNKATAKLYPVANTPQAILDLGVDG 62
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK ANV+L+ AFG
Sbjct: 63 LKSYIKTIGLFNTKAENVIKTCRILLEQHHGEVPEDRAALEALPGVGRKTANVVLNTAFG 122
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
PTI VDTHIFR+ NR G APG ++VE LL+++P + + + H+WL+LHGRY C ARK
Sbjct: 123 WPTIAVDTHIFRVCNRTGFAPGSNVDQVEAKLLKVVPAEFKLDCHHWLILHGRYTCIARK 182
Query: 211 PQCQSCIISNLCKRIKQ 227
P+C SC+I +LC+ ++
Sbjct: 183 PRCGSCLIEDLCEYKEK 199
>gi|159040250|ref|YP_001539503.1| endonuclease III [Salinispora arenicola CNS-205]
gi|157919085|gb|ABW00513.1| endonuclease III [Salinispora arenicola CNS-205]
Length = 270
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 98/194 (50%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ P EL + N L VA +LSAQ TD VN+ T LF +L
Sbjct: 34 LADTHPDAHCELDHSNALELAVATILSAQCTDKRVNEVTPKLFARYRQAADYAGADRAEL 93
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G YR K++++I L L+ D ++P L L LPGIGRK ANVIL AF +
Sbjct: 94 EELIRPTGFYRNKTDSLIKLGQGLVERHDGRVPGKLTDLVHLPGIGRKTANVILGNAFDV 153
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R L P K+E ++ + P + + ++ HGR VC ARKP
Sbjct: 154 PGITVDTHFNRLVRRWRLTTETDPVKIEHAIGALYPKRDWTMLSHRIIFHGRRVCHARKP 213
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 214 ACGACTLTKLCPSY 227
>gi|89054160|ref|YP_509611.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Jannaschia sp. CCS1]
gi|88863709|gb|ABD54586.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Jannaschia sp. CCS1]
Length = 240
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 150/212 (70%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ T + EIF F PKGEL++VN +TL+VAV LSAQ+TD VNKAT
Sbjct: 12 AKRDAMAKQLTYHTIHEIFTRFRDAEAEPKGELHHVNVYTLVVAVALSAQATDAGVNKAT 71
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
K LFEIADTPQKML +G + + +IRTIG+YR K++N+I LS IL++E+ ++P + L
Sbjct: 72 KRLFEIADTPQKMLDLGLEAVTEHIRTIGLYRNKAKNVIKLSQILVDEYGGEVPSSRTAL 131
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANV+L+M +G+P VDTHIFR+ NR +APGK + VE+++ IP +
Sbjct: 132 QSLPGVGRKTANVVLNMWWGMPAQAVDTHIFRVGNRTLIAPGKDVDAVERAVEDNIPAEF 191
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
Q +AH+WL+LHGRY+C ARKP+C +C+I +LC
Sbjct: 192 QLHAHHWLILHGRYICVARKPKCGACLIRDLC 223
>gi|315104873|gb|EFT76849.1| endonuclease III [Propionibacterium acnes HL050PA2]
Length = 242
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 105/203 (51%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL Y + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 23 ANEVRALLAEAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 83 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDVAIPDDLDSLVTLPGVGRKTANVV 142
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 143 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 202
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 203 RCHSRRPACGVCPVAERCPSFGE 225
>gi|197302972|ref|ZP_03168022.1| hypothetical protein RUMLAC_01700 [Ruminococcus lactaris ATCC
29176]
gi|197297967|gb|EDY32517.1| hypothetical protein RUMLAC_01700 [Ruminococcus lactaris ATCC
29176]
Length = 212
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + LFE
Sbjct: 1 MTKKQRALEVIERLKKEYPDADCTLDYDEAWKLLVSVRLAAQCTDARVNVVVEGLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++ +R G+ K+ +I + +L +E+ K+P+ + L +LPG+GR
Sbjct: 61 NVAALADAAVEDIKEIVRPCGLGESKARDISACMKMLRDEYGGKVPEDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L +IIP + + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIKEPKKVEMALWKIIPAEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP C+ C ++++CK+
Sbjct: 181 LVWHGREVCTARTKPHCERCCLADICKK 208
>gi|73666866|ref|YP_302882.1| DNA-(apurinic or apyrimidinic site) lyase [Ehrlichia canis str.
Jake]
gi|72394007|gb|AAZ68284.1| DNA-(apurinic or apyrimidinic site) lyase [Ehrlichia canis str.
Jake]
Length = 212
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 104/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++++ +F F P PK EL Y N FTL+VA++LSA++TDV+VNK T LF+I DT
Sbjct: 1 MNERKIDLLFSKFQGHNPHPKIELRYTNDFTLLVAIVLSARTTDVSVNKITSRLFKIVDT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML +GE L+ YI TIG+Y KS+NII+LS I+IN+++ +P L LPG+GRK
Sbjct: 61 PKKMLDLGENGLKGYINTIGLYNAKSKNIIALSEIIINQYNGAVPLDFNALVELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ +P++ VDTH+FR+SNRIGL K E +LL +IP K AH+WLV
Sbjct: 121 SANVFLNTWLKLPSVAVDTHVFRVSNRIGLVNENNVLKTEYALLNVIPKKWLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+CK+RKP C CI+ +LC+ +
Sbjct: 181 LHGRYICKSRKPLCNQCIVKDLCEYESK 208
>gi|329961055|ref|ZP_08299334.1| endonuclease III [Bacteroides fluxus YIT 12057]
gi|328532341|gb|EGF59145.1| endonuclease III [Bacteroides fluxus YIT 12057]
Length = 224
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N F L++AV+LSAQ TD VN T ++
Sbjct: 1 MRKKERYEKVIAWFRENRPVAETELHYDNPFELLIAVILSAQCTDKRVNMITPAIYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F+ ++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFNCQVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL P K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVPDKCTTPFSVEKELVKNIPEADIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC +C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDNCGLQLMCKYY 209
>gi|212694001|ref|ZP_03302129.1| hypothetical protein BACDOR_03526 [Bacteroides dorei DSM 17855]
gi|212663533|gb|EEB24107.1| hypothetical protein BACDOR_03526 [Bacteroides dorei DSM 17855]
Length = 237
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
G + + ++ F P + EL+Y N F L++AV+LSAQ TD VN T
Sbjct: 18 PKKEGNMKKQELYNKVIAYFQETIPVAETELHYNNPFELLIAVILSAQCTDKRVNMITPP 77
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L+ TP+ + A + + YIR++ K+++++ ++ +L+ +F +++P TLE L +
Sbjct: 78 LYRDFPTPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFHSEVPGTLEELIK 137
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKH 190
LPG+GRK ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP +
Sbjct: 138 LPGVGRKTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLMKYIPKEI 197
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH+WL+LHGRYVC AR P+C C ++ LC+
Sbjct: 198 VPTAHHWLILHGRYVCMARTPKCSECGLNGLCRY 231
>gi|193083940|gb|ACF09617.1| endonuclease III [uncultured marine crenarchaeote AD1000-325-A12]
Length = 212
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 1/204 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +I +P K L Y + F L++A +LSAQ TD VNK TK LF+ +
Sbjct: 5 IIKIHKKLESIYPPIKTSLKYESIFQLLIATILSAQCTDKIVNKTTKKLFKKYPNVSDLA 64
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++N I++ G Y K+ I + S L N +++K+P +E L L G+GRK AN++
Sbjct: 65 NADIRNVKNIIKSTGYYSLKANRIKNTSKRLKNNYNSKVPDNMEDLLTLDGVGRKTANIV 124
Query: 145 LSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
LS+ F I VDTH+ R+SNR+ L P K+E L++I+P + L+LHGR
Sbjct: 125 LSVGFNKNVGIAVDTHVIRLSNRLKLTKNTNPEKIEIDLIKILPKELWNKFSILLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C+A+KP C +C++++LC K+
Sbjct: 185 NICQAKKPDCSNCVLNDLCPYAKE 208
>gi|298491541|ref|YP_003721718.1| endonuclease III ['Nostoc azollae' 0708]
gi|298233459|gb|ADI64595.1| endonuclease III ['Nostoc azollae' 0708]
Length = 224
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
L + EI +P L Y L+VA +LSAQ TD VNK T L
Sbjct: 1 MTRKLLTKKQRALEILSRLHHLYPDATCSLNYSTPVQLLVATILSAQCTDERVNKVTPAL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + + +L+ +R+ G YR K++NI + +++ +F++ +P + L ++
Sbjct: 61 FRRFPDAEGLANADILELEELVRSTGFYRNKAKNIKAACRMIVTDFNSVVPNEMPELLKV 120
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+ RK ANV+L+ A+GI + VDTH+ R+S R+GL P +E+ L++++P
Sbjct: 121 PGVARKTANVVLAHAYGINAGVTVDTHVKRLSQRLGLTKNTEPIGIEKDLMKLLPQADWE 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
N L+ HGR VCKAR P C C +++LC
Sbjct: 181 NWSIRLIYHGRAVCKARSPGCDVCKLADLC 210
>gi|308061916|gb|ADO03804.1| endonuclease III [Helicobacter pylori Cuz20]
Length = 218
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ +L++ N + L+VA +LSAQ TD VNK T LFE
Sbjct: 5 LKRAKTYQKAQQIKELLLKHYPNQTTQLHHKNPYELLVATILSAQCTDARVNKITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++++ I+++ KS+++I+++ ++ +F IP T + L L G
Sbjct: 65 KYPSVKDLALASLEEVKEIIKSVSYSNNKSKHLINMAQKVVRDFKGVIPSTQKELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+ L + + H
Sbjct: 125 VGQKTANVVLSVCFNANCIAVDTHVFRTTHRLGLSDANTPIKTEEELSDLF-KDNLSKLH 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+L GRY CKA+ P C C + C
Sbjct: 184 HALILFGRYTCKAKNPSCGVCFLKEFC 210
>gi|309801734|ref|ZP_07695854.1| endonuclease III [Bifidobacterium dentium JCVIHMP022]
gi|308221676|gb|EFO77968.1| endonuclease III [Bifidobacterium dentium JCVIHMP022]
Length = 221
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K + + P PK L + N F L+VA +LSAQ+TD VN T LF P
Sbjct: 11 KRMHHEYEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A +++++ I +IG +R K++NII LSH L +D +P ++E LT LPG+GRK AN
Sbjct: 71 LQAADPEQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTALPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AF P VDTH+ R +P P +E+ + PP + +
Sbjct: 131 VVLGNAFDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFPPSEWTDLSHR 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L++HGR C ARKP C C +++ C
Sbjct: 191 LIMHGRTTCHARKPDCLDCPLNDTCPS 217
>gi|307150297|ref|YP_003885681.1| endonuclease III [Cyanothece sp. PCC 7822]
gi|306980525|gb|ADN12406.1| endonuclease III [Cyanothece sp. PCC 7822]
Length = 219
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI + +P L Y L+VA +LSAQ TD VNK T LF
Sbjct: 10 KQQRALEILVILERTYPDATCSLTYQTPVQLLVATILSAQCTDERVNKVTPALFARFPDA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++L+ IR+ G YR K++NI ++++F ++PQ +E L LPG+ RK
Sbjct: 70 PSLANASIEELETLIRSTGFYRNKAKNIQGACQKIVSQFGGEVPQQMEQLLSLPGVARKT 129
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ FGI + VDTH+ R+S R+GL P K+E+ L+R++P N ++
Sbjct: 130 ANVVLAHGFGIIQGVTVDTHVKRLSGRLGLTEQTDPIKIERDLMRLLPQPQWENFSIRII 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR VCKARKP C C ++++C
Sbjct: 190 YHGRAVCKARKPDCGVCQLAHVCPA 214
>gi|254425017|ref|ZP_05038735.1| endonuclease III [Synechococcus sp. PCC 7335]
gi|196192506|gb|EDX87470.1| endonuclease III [Synechococcus sp. PCC 7335]
Length = 266
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + EI + +P L + L+VA +LSAQ TD VN+ T LFE
Sbjct: 35 VQKLRKKERALEILSRLKVVYPEAPCSLDHETPVQLMVATMLSAQCTDARVNQVTPALFE 94
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ M +L+ +R+ G +R K++NI + H ++ EF+ +P ++E LT LPG
Sbjct: 95 RFPDAKAMAGAEIAELEELVRSTGFFRSKAKNIRAACHKIVTEFNGVVPNSMEALTSLPG 154
Query: 136 IGRKGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ RK ANV+ + VDTH+ R+S GL P K+EQ L++++P N
Sbjct: 155 VARKTANVVLAHAFDIHEGVTVDTHVKRLSGLFGLTKQTEPIKIEQDLMKLLPQPDWENW 214
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCK 223
LV HGR VC AR P C SC + ++C
Sbjct: 215 SIRLVYHGRAVCSARNPNCSSCELLDICP 243
>gi|311743380|ref|ZP_07717187.1| endonuclease III [Aeromicrobium marinum DSM 15272]
gi|311313448|gb|EFQ83358.1| endonuclease III [Aeromicrobium marinum DSM 15272]
Length = 236
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 3/206 (1%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + + +P EL + + F L+VA +LSAQ+TD VN T LF
Sbjct: 11 RRARRMHRVLAEAYPEAGCELDFADPFQLLVATVLSAQTTDRRVNAVTPALFAAYPDAAA 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++ IR G +R K+ +++ LS L+ D ++P L L +LPG+GRK AN
Sbjct: 71 LAAADRAVVEELIRPTGFFRAKTTSLLGLSAALVERHDGRVPGRLTDLVQLPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGK---TPNKVEQSLLRIIPPKHQYNAHYWLV 199
V+L AF +P I VDTH R+ R G P + E ++ + + + L+
Sbjct: 131 VVLGNAFDVPGITVDTHFSRLVGRFGWVDDHTVADPVRTEHAVGALFERRDWTMLSHRLI 190
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
HGR C ARKP C +C ++ C
Sbjct: 191 WHGRRCCHARKPACGACPVARWCPAF 216
>gi|126732266|ref|ZP_01748067.1| endonuclease III [Sagittula stellata E-37]
gi|126707348|gb|EBA06413.1| endonuclease III [Sagittula stellata E-37]
Length = 418
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 148/212 (69%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L E+F F PKGEL +VN +TL+VAV LSAQ+TD VNKAT LF
Sbjct: 205 MARQMDYHTLREVFSRFRAAEAEPKGELNHVNAYTLVVAVALSAQATDAGVNKATAGLFA 264
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ADTP+KMLA+GE+ L ++I+TIG++R K++N+I LS IL++++ ++P + L LPG
Sbjct: 265 VADTPEKMLALGEEGLIDHIKTIGLFRNKAKNVIKLSRILVDQYGGEVPCSRAALESLPG 324
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M + P VDTHIFR+ NR G+ PGK VE+++ +P Q +AH
Sbjct: 325 VGRKTANVVLNMWWHYPAQAVDTHIFRVGNRTGICPGKDVVAVERAIEDNVPVDFQQHAH 384
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+WL+LHGRY+C ARKP+C++C+I +LC ++
Sbjct: 385 HWLILHGRYICVARKPKCKACLIKDLCPFEEK 416
>gi|209543801|ref|YP_002276030.1| endonuclease III [Gluconacetobacter diazotrophicus PAl 5]
gi|209531478|gb|ACI51415.1| endonuclease III [Gluconacetobacter diazotrophicus PAl 5]
Length = 228
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 143/221 (64%), Gaps = 1/221 (0%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ S + S + T KE+E L + P EL +V+ +TL+VAV LSAQ+TD +V
Sbjct: 2 TQSPRPASARRRM-TLKEVERFITLLAEAHPDAASELDFVDDYTLLVAVALSAQATDASV 60
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N+ATK LF A P M+A+GE + +IR+IG++R K+ N+++LS L+++ + ++P+
Sbjct: 61 NRATKGLFRDAPDPAAMVALGEDGVAAHIRSIGLWRTKARNVVALSQALLDQHEGQVPRD 120
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+GRK ANV++++AFG T+ VDTHIFRI NR GLAPG+T VE L+ I
Sbjct: 121 RAALEALPGVGRKTANVVMNVAFGDSTMAVDTHIFRIGNRTGLAPGRTTRAVEDQLVARI 180
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P AH+WL+LHGRYVCKAR+P+C C C+ +
Sbjct: 181 PAPLLRPAHHWLILHGRYVCKARRPECWRCPAQEPCQYTAK 221
>gi|113954997|ref|YP_731054.1| endonuclease III [Synechococcus sp. CC9311]
gi|113882348|gb|ABI47306.1| endonuclease III [Synechococcus sp. CC9311]
Length = 217
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 109/201 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P P L + + F+L++AVLLSAQ TD VN+ T LF
Sbjct: 1 MLRKERASHLLCRLDEHYPDPPIPLDHSDPFSLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A+ E ++ +IR +G+ + K+ N+ L+H+LI K+P + E L LPG+G
Sbjct: 61 TPNAMAALTEAEIFGHIRQLGLAKTKARNVHKLAHMLITMHGGKVPSSFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + E+ L + P + H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSNGDSVERTEKDLKSLFPAESWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C I
Sbjct: 181 IFYGREHCTARGCDGTVCPIC 201
>gi|310814627|ref|YP_003962591.1| endonuclease III [Ketogulonicigenium vulgare Y25]
gi|308753362|gb|ADO41291.1| endonuclease III [Ketogulonicigenium vulgare Y25]
Length = 214
Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 151/203 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ E+F F P+P+GEL+Y N +TL+VAV LSAQ+TDV VN+AT+ LFE+ADTPQKML
Sbjct: 10 MREVFTRFRAASPTPEGELHYTNAYTLVVAVALSAQATDVGVNRATRALFEVADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE++L +I+TIG++R K++N++ LS IL++EF ++P + L LPG+GRK ANV+
Sbjct: 70 DLGEERLIEHIKTIGLFRNKAKNVMRLSQILVDEFGGEVPSSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++ + P VDTHIFRI NR G+ PGK VE+++ +P + Q +AH+WL+LHGRY
Sbjct: 130 LNIWWHFPAQAVDTHIFRIGNRSGICPGKDVVAVERAIEDNVPAEFQQHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C ARKP+C C+I++LC ++
Sbjct: 190 ICLARKPRCGDCLIADLCLFEEK 212
>gi|298694743|gb|ADI97965.1| endonuclease III-like protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TTEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|225377184|ref|ZP_03754405.1| hypothetical protein ROSEINA2194_02830 [Roseburia inulinivorans DSM
16841]
gi|225210970|gb|EEG93324.1| hypothetical protein ROSEINA2194_02830 [Roseburia inulinivorans DSM
16841]
Length = 220
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI +P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKKQLALEIIKRLKEAYPDAGCTLDYDEAWKLLVSVRLAAQCTDARVNVIVEKLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A G +++ +R G+ + K+++I + +L ++ K+P + L +LPG+GR
Sbjct: 61 DVDALAAAGVSEIEEIVRPCGLGKSKAKDISACMKMLKEQYGGKVPDDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVKDIKEPKKVEMELWKIIPPEEGNDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
LV HGR VC AR P C C+++++C K+
Sbjct: 181 LVEHGRDVCTARTNPHCDRCVLNDICATGKK 211
>gi|257125212|ref|YP_003163326.1| endonuclease III [Leptotrichia buccalis C-1013-b]
gi|257049151|gb|ACV38335.1| endonuclease III [Leptotrichia buccalis C-1013-b]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L++IF + K+ PK L + + L+VAV+LSAQ TD VN TK LF++
Sbjct: 1 MTKKERLKKIFPILKEKFGEPKAALEFETPYQLMVAVILSAQCTDARVNIVTKELFKVVK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + + ++ L+ YI++ G Y+ K++NI + ++++++ + IP+ LE L LPG+GR
Sbjct: 61 EPADIRKMNQETLEKYIKSTGFYKNKAKNIKLNAEMMLDKYKDIIPKKLEELIELPGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L + I VDTH+ R+SNRIG P +E+ L++ IP K+ + ++
Sbjct: 121 KTANVVLGELWNIREGIVVDTHVKRLSNRIGFVKNDNPEIIERELMKFIPKKYWFVYSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGR C ARKP+C+ C I + CK ++
Sbjct: 181 LILHGRDKCIARKPKCEICEIRDYCKYNEE 210
>gi|282916719|ref|ZP_06324477.1| endonuclease III [Staphylococcus aureus subsp. aureus D139]
gi|283770525|ref|ZP_06343417.1| endonuclease III [Staphylococcus aureus subsp. aureus H19]
gi|282319206|gb|EFB49558.1| endonuclease III [Staphylococcus aureus subsp. aureus D139]
gi|283460672|gb|EFC07762.1| endonuclease III [Staphylococcus aureus subsp. aureus H19]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|82751051|ref|YP_416792.1| endonuclease III-like protein [Staphylococcus aureus RF122]
gi|82656582|emb|CAI81005.1| endonuclease III-like protein [Staphylococcus aureus RF122]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCGICPLLEDCREGQK 210
>gi|149203137|ref|ZP_01880108.1| endonuclease III [Roseovarius sp. TM1035]
gi|149143683|gb|EDM31719.1| endonuclease III [Roseovarius sp. TM1035]
Length = 214
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 105/199 (52%), Positives = 147/199 (73%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++ +IF F P PKGEL +VN +TL+VAV LSAQ+TDV VNKAT+ LF+IADTPQKM
Sbjct: 9 KVRDIFARFEAAEPEPKGELEHVNAYTLVVAVALSAQATDVGVNKATRDLFKIADTPQKM 68
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L +GE+ L +I+TIG+YR K+++++ LS IL+ ++ ++P + L LPG+GRK ANV
Sbjct: 69 LDLGEEGLIQHIKTIGLYRNKAKHVMKLSRILVEDYGGEVPNSRAALQSLPGVGRKTANV 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+M + P VDTHIFR+ NR G+ PGKT + VE+++ +P Q +AH+WL+LHGR
Sbjct: 129 VLNMWWHYPAQAVDTHIFRVGNRSGICPGKTVDAVERAIEDNVPVDFQRHAHHWLILHGR 188
Query: 204 YVCKARKPQCQSCIISNLC 222
Y CKARKP C +C+I +LC
Sbjct: 189 YTCKARKPACGTCLIRDLC 207
>gi|56963822|ref|YP_175553.1| endonuclease III [Bacillus clausii KSM-K16]
gi|56910065|dbj|BAD64592.1| endonuclease III [Bacillus clausii KSM-K16]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P + EL + N F L++AV+LSAQ TD VNK T LF
Sbjct: 1 MLSKKDTQYAIDQMGELFPEAECELTHSNPFELLIAVVLSAQCTDALVNKVTPKLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + ++LQ IR+IG+YR K++NI LS L+ FD ++P+ E L L G+GR
Sbjct: 61 TPEDYVQVPLEELQEDIRSIGLYRNKAKNIKKLSQSLLEHFDGQVPREREQLESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFG P I VDTH+ R+S R+G+ +VE++L++ I + +AH+
Sbjct: 121 KTANVVTSVAFGEPAIAVDTHVERVSKRLGICRWKDNVRQVEETLMKKIKKEDWSDAHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C +C + ++C+ K+
Sbjct: 181 LIFFGRYHCKAQAPKCPTCPLLDMCREGKK 210
>gi|15924442|ref|NP_371976.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927033|ref|NP_374566.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus
N315]
gi|21283071|ref|NP_646159.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49483641|ref|YP_040865.1| endonuclease [Staphylococcus aureus subsp. aureus MRSA252]
gi|57650407|ref|YP_186336.1| endonuclease III [Staphylococcus aureus subsp. aureus COL]
gi|87160441|ref|YP_494040.1| endonuclease III [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195186|ref|YP_499987.1| endonuclease III [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267938|ref|YP_001246881.1| endonuclease III [Staphylococcus aureus subsp. aureus JH9]
gi|150394001|ref|YP_001316676.1| endonuclease III [Staphylococcus aureus subsp. aureus JH1]
gi|151221575|ref|YP_001332397.1| hypothetical protein NWMN_1363 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979771|ref|YP_001442030.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus Mu3]
gi|161509620|ref|YP_001575279.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221140981|ref|ZP_03565474.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253315961|ref|ZP_04839174.1| endonuclease III [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253733301|ref|ZP_04867466.1| endonuclease family protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006239|ref|ZP_05144840.2| endonuclease III [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257425518|ref|ZP_05601943.1| endonuclease III [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428177|ref|ZP_05604575.1| endonuclease III [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430807|ref|ZP_05607189.1| endonuclease III [Staphylococcus aureus subsp. aureus 68-397]
gi|257433565|ref|ZP_05609923.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436407|ref|ZP_05612454.1| endonuclease III [Staphylococcus aureus subsp. aureus M876]
gi|258413301|ref|ZP_05681577.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
A9763]
gi|258422516|ref|ZP_05685424.1| endonuclease III [Staphylococcus aureus A9635]
gi|258426788|ref|ZP_05688008.1| endonuclease III [Staphylococcus aureus A9299]
gi|258444786|ref|ZP_05693115.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A8115]
gi|258447380|ref|ZP_05695524.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
A6300]
gi|258449735|ref|ZP_05697836.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A6224]
gi|258451110|ref|ZP_05699145.1| endonuclease III [Staphylococcus aureus A5948]
gi|258454596|ref|ZP_05702560.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A5937]
gi|262048978|ref|ZP_06021857.1| endonuclease-like protein [Staphylococcus aureus D30]
gi|262051624|ref|ZP_06023844.1| endonuclease-like protein [Staphylococcus aureus 930918-3]
gi|269203077|ref|YP_003282346.1| endonuclease III [Staphylococcus aureus subsp. aureus ED98]
gi|282892948|ref|ZP_06301183.1| endonuclease III [Staphylococcus aureus A8117]
gi|282904035|ref|ZP_06311923.1| endonuclease III [Staphylococcus aureus subsp. aureus C160]
gi|282905800|ref|ZP_06313655.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282908770|ref|ZP_06316588.1| endonuclease III [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911031|ref|ZP_06318833.1| endonuclease III [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914243|ref|ZP_06322030.1| endonuclease III [Staphylococcus aureus subsp. aureus M899]
gi|282919166|ref|ZP_06326901.1| endonuclease III [Staphylococcus aureus subsp. aureus C427]
gi|282921698|ref|ZP_06329415.1| endonuclease III [Staphylococcus aureus A9765]
gi|282924350|ref|ZP_06332024.1| endonuclease III [Staphylococcus aureus subsp. aureus C101]
gi|282927979|ref|ZP_06335588.1| endonuclease III [Staphylococcus aureus A10102]
gi|283958217|ref|ZP_06375668.1| endonuclease III [Staphylococcus aureus subsp. aureus A017934/97]
gi|284024451|ref|ZP_06378849.1| endonuclease III [Staphylococcus aureus subsp. aureus 132]
gi|293501269|ref|ZP_06667120.1| endonuclease III [Staphylococcus aureus subsp. aureus 58-424]
gi|293510230|ref|ZP_06668938.1| endonuclease III [Staphylococcus aureus subsp. aureus M809]
gi|293526825|ref|ZP_06671509.1| endonuclease III [Staphylococcus aureus subsp. aureus M1015]
gi|294848416|ref|ZP_06789162.1| endonuclease III [Staphylococcus aureus A9754]
gi|295407202|ref|ZP_06817002.1| endonuclease III [Staphylococcus aureus A8819]
gi|295427962|ref|ZP_06820594.1| endonuclease III [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275350|ref|ZP_06857857.1| endonuclease III [Staphylococcus aureus subsp. aureus MR1]
gi|297207888|ref|ZP_06924321.1| endonuclease III [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297244626|ref|ZP_06928509.1| endonuclease III [Staphylococcus aureus A8796]
gi|297591068|ref|ZP_06949706.1| endonuclease III [Staphylococcus aureus subsp. aureus MN8]
gi|300911973|ref|ZP_07129416.1| endonuclease III [Staphylococcus aureus subsp. aureus TCH70]
gi|304380966|ref|ZP_07363624.1| endonuclease III [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|13701250|dbj|BAB42545.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247223|dbj|BAB57614.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|21204511|dbj|BAB95207.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49241770|emb|CAG40461.1| putative endonuclease [Staphylococcus aureus subsp. aureus MRSA252]
gi|57284593|gb|AAW36687.1| endonuclease III [Staphylococcus aureus subsp. aureus COL]
gi|87126415|gb|ABD20929.1| endonuclease III [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202744|gb|ABD30554.1| endonuclease III, putative [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741007|gb|ABQ49305.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946453|gb|ABR52389.1| endonuclease III [Staphylococcus aureus subsp. aureus JH1]
gi|150374375|dbj|BAF67635.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721906|dbj|BAF78323.1| endonuclease-like protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160368429|gb|ABX29400.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253728841|gb|EES97570.1| endonuclease family protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271975|gb|EEV04113.1| endonuclease III [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275018|gb|EEV06505.1| endonuclease III [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278935|gb|EEV09554.1| endonuclease III [Staphylococcus aureus subsp. aureus 68-397]
gi|257281658|gb|EEV11795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284689|gb|EEV14809.1| endonuclease III [Staphylococcus aureus subsp. aureus M876]
gi|257839865|gb|EEV64333.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
A9763]
gi|257847273|gb|EEV71279.1| endonuclease III [Staphylococcus aureus A9635]
gi|257849949|gb|EEV73907.1| endonuclease III [Staphylococcus aureus A9299]
gi|257850279|gb|EEV74232.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A8115]
gi|257853571|gb|EEV76530.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
A6300]
gi|257856983|gb|EEV79883.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A6224]
gi|257861165|gb|EEV83978.1| endonuclease III [Staphylococcus aureus A5948]
gi|257862979|gb|EEV85743.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus A5937]
gi|259160465|gb|EEW45489.1| endonuclease-like protein [Staphylococcus aureus 930918-3]
gi|259162910|gb|EEW47473.1| endonuclease-like protein [Staphylococcus aureus D30]
gi|262075367|gb|ACY11340.1| endonuclease III [Staphylococcus aureus subsp. aureus ED98]
gi|269940945|emb|CBI49329.1| putative endonuclease [Staphylococcus aureus subsp. aureus TW20]
gi|282313737|gb|EFB44130.1| endonuclease III [Staphylococcus aureus subsp. aureus C101]
gi|282316976|gb|EFB47350.1| endonuclease III [Staphylococcus aureus subsp. aureus C427]
gi|282322311|gb|EFB52635.1| endonuclease III [Staphylococcus aureus subsp. aureus M899]
gi|282324726|gb|EFB55036.1| endonuclease III [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327034|gb|EFB57329.1| endonuclease III [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331092|gb|EFB60606.1| endonuclease III/DNA-(apurinic or apyrimidinic site) lyase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282590276|gb|EFB95356.1| endonuclease III [Staphylococcus aureus A10102]
gi|282593960|gb|EFB98949.1| endonuclease III [Staphylococcus aureus A9765]
gi|282595653|gb|EFC00617.1| endonuclease III [Staphylococcus aureus subsp. aureus C160]
gi|282764945|gb|EFC05070.1| endonuclease III [Staphylococcus aureus A8117]
gi|283470665|emb|CAQ49876.1| endonuclease III [Staphylococcus aureus subsp. aureus ST398]
gi|283790366|gb|EFC29183.1| endonuclease III [Staphylococcus aureus subsp. aureus A017934/97]
gi|285817132|gb|ADC37619.1| Endonuclease III [Staphylococcus aureus 04-02981]
gi|290920383|gb|EFD97447.1| endonuclease III [Staphylococcus aureus subsp. aureus M1015]
gi|291096274|gb|EFE26535.1| endonuclease III [Staphylococcus aureus subsp. aureus 58-424]
gi|291467174|gb|EFF09692.1| endonuclease III [Staphylococcus aureus subsp. aureus M809]
gi|294824442|gb|EFG40865.1| endonuclease III [Staphylococcus aureus A9754]
gi|294967915|gb|EFG43944.1| endonuclease III [Staphylococcus aureus A8819]
gi|295128320|gb|EFG57954.1| endonuclease III [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296887462|gb|EFH26362.1| endonuclease III [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297178656|gb|EFH37902.1| endonuclease III [Staphylococcus aureus A8796]
gi|297575954|gb|EFH94670.1| endonuclease III [Staphylococcus aureus subsp. aureus MN8]
gi|300886219|gb|EFK81421.1| endonuclease III [Staphylococcus aureus subsp. aureus TCH70]
gi|302751283|gb|ADL65460.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340491|gb|EFM06427.1| endonuclease III [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312438143|gb|ADQ77214.1| endonuclease III [Staphylococcus aureus subsp. aureus TCH60]
gi|312829844|emb|CBX34686.1| endonuclease III [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129167|gb|EFT85162.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus CGS03]
gi|315195350|gb|EFU25737.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus CGS00]
gi|315197802|gb|EFU28136.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140376|gb|EFW32232.1| endonuclease III [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142697|gb|EFW34500.1| endonuclease III [Staphylococcus aureus subsp. aureus MRSA177]
gi|323439545|gb|EGA97266.1| endonuclease III-like protein [Staphylococcus aureus O11]
gi|323442216|gb|EGA99847.1| endonuclease III-like protein [Staphylococcus aureus O46]
gi|329314129|gb|AEB88542.1| Endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase
[Staphylococcus aureus subsp. aureus T0131]
gi|329723209|gb|EGG59740.1| endonuclease III [Staphylococcus aureus subsp. aureus 21189]
gi|329727204|gb|EGG63660.1| endonuclease III [Staphylococcus aureus subsp. aureus 21172]
gi|329731338|gb|EGG67704.1| endonuclease III [Staphylococcus aureus subsp. aureus 21193]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|229817097|ref|ZP_04447379.1| hypothetical protein BIFANG_02353 [Bifidobacterium angulatum DSM
20098]
gi|229784886|gb|EEP21000.1| hypothetical protein BIFANG_02353 [Bifidobacterium angulatum DSM
20098]
Length = 207
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 5/203 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +P P+ L++ L++A +LSAQ+TD VN T LF + +
Sbjct: 5 YAILCSTYPEPECALHFETPLQLLIATVLSAQTTDKRVNTVTPELFATYPSCSDLACANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ ++ IR +G YR K+++++ L+ +L + FD ++P T++ LT LPG+GRK ANV+L A
Sbjct: 65 EDVERIIRPLGFYRTKTKHLLGLAQVLASRFDGEVPSTMDELTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F IP VDTH+ R+ P VE+ + PP+ + + L+LHGR
Sbjct: 125 FHIPGFPVDTHVMRVTGRLRWRSDWRHANPNPVAVEREITACFPPEQWTDLSHRLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C ARKP C C +++ C +
Sbjct: 185 AICHARKPDCGICPLADSCPSAR 207
>gi|225575368|ref|ZP_03783978.1| hypothetical protein RUMHYD_03458 [Blautia hydrogenotrophica DSM
10507]
gi|225037409|gb|EEG47655.1| hypothetical protein RUMHYD_03458 [Blautia hydrogenotrophica DSM
10507]
Length = 217
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 2/210 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K EI ++P L Y + + L+V+V L+AQ TD VN + L+E
Sbjct: 3 SKMTKEKLALEIIDRLKKEYPDAGCTLDYEDAWKLLVSVRLAAQCTDARVNVVVQGLYEK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + ++ +R G+ + K+ +I +L E+ ++P + L +LPG+
Sbjct: 63 YPTVHDLAQADVADIEEIVRPCGLGKSKARDISGCMKMLEEEYGGQVPADFQKLLKLPGV 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAH 195
GRK AN+I+ FG P I DTH R+ NR+GL P KVE +L ++IPP+ +
Sbjct: 123 GRKSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDQIKEPKKVEMALWKLIPPEEGSDFC 182
Query: 196 YWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ LV HGR VC AR KP C+ C + +LC+R
Sbjct: 183 HRLVYHGRDVCTARTKPHCEKCCVRDLCER 212
>gi|160935307|ref|ZP_02082689.1| hypothetical protein CLOBOL_00202 [Clostridium bolteae ATCC
BAA-613]
gi|158441665|gb|EDP19365.1| hypothetical protein CLOBOL_00202 [Clostridium bolteae ATCC
BAA-613]
Length = 212
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K EI ++P L Y + + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKEKLALEIIDRLKKEYPDAGCTLDYDHAWKLLVSVRLAAQCTDARVNVVVEDLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++ ++ G+ K+ +I + IL ++ K+P + L +LPG+GR
Sbjct: 61 DVDALAEADVEDIERIVKPCGLGHSKARDISACMKILKEQYGGKVPDDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL G P KVE L +++PP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMVLWKLVPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP+C++C ++++CK+
Sbjct: 181 LVFHGRDVCTARTKPRCEACCLNDICKK 208
>gi|312130132|ref|YP_003997472.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Leadbetterella byssophila DSM 17132]
gi|311906678|gb|ADQ17119.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Leadbetterella byssophila DSM 17132]
Length = 228
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 5/214 (2%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ I F P+P+ EL Y N + L+VAV+LSAQ TD VN T LF
Sbjct: 1 MLKKDRYAGIISYFGEHMPNPETELMYSNPYELLVAVILSAQCTDKRVNMVTPELFARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++ YIR+I K+++++ ++ IL+++++N++P +E L ++PG+GR
Sbjct: 61 DARVLKHAEPEEVFEYIRSISYPNNKAKHLVGMAKILVDQYNNEVPSAIEDLVKMPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ PT+ VDTH+FR+S+R+GL KTP VE+ L++ + AH+
Sbjct: 121 KTANVIASVIHQKPTMAVDTHVFRVSHRLGLVSPKSKTPLAVEKELVKYLSRDIIPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC---KRIKQ 227
WL+LHGRY C AR P+C C I+ C +I++
Sbjct: 181 WLILHGRYTCIARNPKCGECGITEFCNLYPKIQK 214
>gi|237710333|ref|ZP_04540814.1| endonuclease III [Bacteroides sp. 9_1_42FAA]
gi|229455795|gb|EEO61516.1| endonuclease III [Bacteroides sp. 9_1_42FAA]
Length = 222
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
G + + ++ F P + EL+Y N F L++AV+LSAQ TD VN T
Sbjct: 3 PKKEGNMKKQELYNKVIAYFQKTIPVAETELHYNNPFELLIAVILSAQCTDKRVNMITPP 62
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L+ TP+ + A + + YIR++ K+++++ ++ +L+ +F +++P TLE L +
Sbjct: 63 LYRDFPTPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFHSEVPGTLEELIK 122
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKH 190
LPG+GRK ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP +
Sbjct: 123 LPGVGRKTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLMKYIPKEI 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH+WL+LHGRYVC AR P+C C ++ LC+
Sbjct: 183 VPTAHHWLILHGRYVCMARTPKCSECGLNGLCRY 216
>gi|163797097|ref|ZP_02191052.1| Endonuclease III/Nth [alpha proteobacterium BAL199]
gi|159177613|gb|EDP62166.1| Endonuclease III/Nth [alpha proteobacterium BAL199]
Length = 217
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 108/209 (51%), Positives = 150/209 (71%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T +E F L P P+GEL + + FTL+VAV+LSAQ+TDV VNKAT+ LF
Sbjct: 1 MTRRMTNAAVEGFFAALELSNPEPEGELDWSSPFTLLVAVVLSAQATDVGVNKATRRLFP 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
IADTPQKMLA+GE+ +++ I+TIG++ K++N+I+LS LI E ++P+ L LPG
Sbjct: 61 IADTPQKMLALGEEGVRDCIKTIGLFNAKAKNVIALSAKLIEEHGGEVPRDRADLEALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L++AFG PTI VDTH+FR++NR G+A GKTP VEQ+LL+ +P + + H
Sbjct: 121 VGRKTANVVLNIAFGEPTIAVDTHLFRLANRTGMASGKTPLAVEQALLKRVPAHYMQHVH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRY+CKARKP+C C+ C
Sbjct: 181 HWLILHGRYICKARKPECWRCVARAFCNY 209
>gi|320451065|ref|YP_004203161.1| endonuclease III [Thermus scotoductus SA-01]
gi|320151234|gb|ADW22612.1| endonuclease III [Thermus scotoductus SA-01]
Length = 217
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 121/203 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
I +P K EL + N F L+VA +LSAQ+TD +VN+AT LF P
Sbjct: 11 KKARALAILKALKAAYPGAKTELKHNNPFQLLVATVLSAQATDKSVNEATPALFARFPDP 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + ++++ YIR IG+YR K++N+++L+ L+ E ++P+ + L +LPG+G K
Sbjct: 71 QALAKATPEEVEPYIRRIGLYRTKAKNLVALARRLVEEHGGEVPRDKKALMKLPGVGWKT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L AFG+P I VDTH+ R++ R+ L+ K P ++ L + P + H+ LVL
Sbjct: 131 ATVVLGAAFGVPGIAVDTHVARLARRLCLSLAKAPERIGAELEALFPKEEWVFVHHALVL 190
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
HGRYVC ARKP+C +C ++ C
Sbjct: 191 HGRYVCLARKPRCGACSLAPHCP 213
>gi|118619415|ref|YP_907747.1| endonuclease III Nth [Mycobacterium ulcerans Agy99]
gi|118571525|gb|ABL06276.1| endonuclease III Nth [Mycobacterium ulcerans Agy99]
Length = 233
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 105/203 (51%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + +P EL + + L VA +LSAQSTD VN T LF T
Sbjct: 3 RRARRMNRKLAQAFPHVYCELDFTSPLELAVATILSAQSTDKRVNLTTPDLFAKYQTALD 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+L+N IR G YR K+ ++I L L+ FD ++P T+E L LPG+GRK AN
Sbjct: 63 YAQADRAELENLIRPTGFYRNKANSLIGLGQALVERFDGQVPATMEELVTLPGVGRKTAN 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
VIL AF +P I VDTH R++ R + P KVE ++ +I K + ++ HG
Sbjct: 123 VILGNAFDVPGITVDTHFGRLARRWRWTAEEDPVKVEHAVGELIERKEWTLLSHRVIFHG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R VC ARKP C C+++ C
Sbjct: 183 RRVCHARKPACGVCVLAKDCPSY 205
>gi|124267484|ref|YP_001021488.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methylibium petroleiphilum PM1]
gi|124260259|gb|ABM95253.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methylibium petroleiphilum PM1]
Length = 212
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
P ++E F P P EL Y + F L+ AVLLSAQ+TDV+VNKAT+ LF +A +
Sbjct: 1 MKPADVETFFATLKAANPQPASELVYSSVFELLAAVLLSAQATDVSVNKATRRLFAVAPS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ+MLA+G + +I+TIG++R K+++++ +LI ++P++ E L LPG+GRK
Sbjct: 61 PQRMLALGLDGVIEHIKTIGLFRSKAKHLLETCRLLIERHGGRVPRSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+ NR GLAPGKTP VE LL+ +P + +AH+WL+
Sbjct: 121 TANVVLNVAFGEPTLAVDTHIFRVGNRTGLAPGKTPLAVELKLLQRVPAAYLEDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC+ARKP+C C ++++C
Sbjct: 181 LHGRYVCQARKPRCWDCAVADVCDF 205
>gi|254496014|ref|ZP_05108917.1| endonuclease III [Legionella drancourtii LLAP12]
gi|254354763|gb|EET13395.1| endonuclease III [Legionella drancourtii LLAP12]
Length = 201
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 141/197 (71%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
F + P P EL Y + F L++AV+LSAQ+TDV+VNKAT LF +A+TPQ +L +G +
Sbjct: 2 RFRAQNPHPTTELIYHSAFELLIAVILSAQATDVSVNKATAKLFPVANTPQAILDLGIVQ 61
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L+ YI++IG+Y K+ENII +L+ + ++P + L LPG+GRK ANV+L+ AFG
Sbjct: 62 LKEYIKSIGLYNSKAENIIKTCALLLQNYHGEVPNQRDALESLPGVGRKTANVVLNTAFG 121
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
PT+ VDTHIFR++NR G+A GKTP E LL+ I P+ ++AH+WL+LHGRYVC AR
Sbjct: 122 QPTMAVDTHIFRVANRTGIATGKTPLAAELGLLKNIEPEFLHDAHHWLILHGRYVCTARN 181
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC++CII +LC+ +
Sbjct: 182 PQCRTCIIRDLCEFKDK 198
>gi|190570960|ref|YP_001975318.1| endonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|213019476|ref|ZP_03335282.1| endonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
gi|190357232|emb|CAQ54653.1| endonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|212994898|gb|EEB55540.1| endonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
Length = 212
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 113/211 (53%), Positives = 152/211 (72%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++E IF F P+PK EL Y NHFTL+VA++LSA++TD++VNK TK LF IADT
Sbjct: 1 MDSKKVELIFEKFQQSNPAPKIELNYTNHFTLLVAIVLSARTTDISVNKITKELFSIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML +G+ +L+ I +IG+Y K++NII LS ILI +++K+P + L LPG+GRK
Sbjct: 61 PEKMLNLGQSELRKCISSIGLYNSKAKNIIGLSKILIERYNSKVPTNFDDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ GIPT+ VDTH+FR+SNR+GL K K EQSLL ++P K+ AH+WLV
Sbjct: 121 SANVFLNSGLGIPTLAVDTHVFRVSNRVGLVKEKDVLKTEQSLLNVVPKKYLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNL----CKRIK 226
LHGRY+CKA+KP C++C I +L CKR K
Sbjct: 181 LHGRYICKAQKPLCEACTIHDLCEFECKRYK 211
>gi|329956862|ref|ZP_08297430.1| endonuclease III [Bacteroides clarus YIT 12056]
gi|328523619|gb|EGF50711.1| endonuclease III [Bacteroides clarus YIT 12056]
Length = 224
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+I F P + EL+Y N + L++AV+LSAQ TD VN T L+
Sbjct: 1 MRKKERYEKILAWFRENRPVAETELHYDNPYELLIAVILSAQCTDKRVNMITPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +FD+++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVVYGYIRSVSYPNNKAKHLVGMAKMLVKDFDSQVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDKCTTPFSVEKELVKHIPETEIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC +C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDNCGLQLMCKYY 209
>gi|306824244|ref|ZP_07457614.1| endonuclease III [Bifidobacterium dentium ATCC 27679]
gi|304552447|gb|EFM40364.1| endonuclease III [Bifidobacterium dentium ATCC 27679]
Length = 209
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ P PK L + N F L+VA +LSAQ+TD VN T LF P + A
Sbjct: 5 YEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPVLFGRFPGPADLQAADP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++++ I +IG +R K++NII LSH L +D +P ++E LT LPG+GRK ANV+L A
Sbjct: 65 EQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F P VDTH+ R +P P +E+ + PP + + L++HGR
Sbjct: 125 FDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFPPSEWTDLSHRLIMHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C ARKP C C +++ C
Sbjct: 185 TTCHARKPDCLDCPLNDTCPS 205
>gi|167763299|ref|ZP_02435426.1| hypothetical protein BACSTE_01672 [Bacteroides stercoris ATCC
43183]
gi|167698593|gb|EDS15172.1| hypothetical protein BACSTE_01672 [Bacteroides stercoris ATCC
43183]
Length = 224
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+I F P + EL+Y N + L++AV+LSAQ TD VN T L+
Sbjct: 1 MRKKERYEKILAWFRENRPIAETELHYNNPYELLIAVILSAQCTDKRVNMITPALYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVVYEYIRSVSYPNNKAKHLVGMAQMLVKDFNSQVPDTLEKLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDKCTTPFSVEKELVKYIPEAEIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC +C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDNCGLQLMCKYY 209
>gi|167627783|ref|YP_001678283.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597784|gb|ABZ87782.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 212
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K ++ IF + P P EL Y ++F L++AV+LSAQ+TDV+VNKAT+ L++IA+
Sbjct: 1 MNRQKRIQ-IFETWKRNDPHPTTELEYNSNFELLIAVILSAQATDVSVNKATQILYKIAN 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A+GE+KL YI++IG+Y+ K++N+I+ LI +F++++P + L L G+GR
Sbjct: 60 TPEAIYALGEQKLAQYIKSIGLYKTKAKNVIATCKDLIEKFNSQVPDNFDDLISLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AF PT+ +DTHIFR++NRI LA GK N+VE+ LLR+IP ++ +AH+W+
Sbjct: 120 KTANVVLNTAFNQPTMAIDTHIFRLANRIPLAKGKNVNEVEKKLLRVIPKEYLQDAHHWI 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRY+C A+KP+C++CII C+ +
Sbjct: 180 ILHGRYICTAQKPKCRNCIIFQYCEFKDK 208
>gi|15604580|ref|NP_221098.1| endonuclease III (nth) [Rickettsia prowazekii str. Madrid E]
gi|3023687|sp|O05956|END3_RICPR RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|2073488|emb|CAA72458.1| endonuclease III [Rickettsia prowazekii]
gi|3861275|emb|CAA15174.1| ENDONUCLEASE III (nth) [Rickettsia prowazekii]
gi|292572387|gb|ADE30302.1| Endonuclease III [Rickettsia prowazekii Rp22]
Length = 212
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 105/201 (52%), Positives = 143/201 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P P+ EL Y N FTL+VAV+LSA++TD++VN ATKHLFE +TP+K L
Sbjct: 6 MNKIFEIFSKNNPKPQTELIYKNDFTLLVAVILSARATDISVNLATKHLFETYNTPEKFL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ YI++IG++ K++NII+L ILI + IP + L +LPG+GRK ANV+
Sbjct: 66 ELGEEGLKKYIKSIGLFNSKAKNIIALCQILIKNYQTSIPNNFKELVKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ F +PT+ VDTH+FR+S RIGLA G T VE+ LL+II K AH+WL+LHGRY
Sbjct: 126 LNCLFAMPTMAVDTHVFRVSKRIGLAKGNTAAIVEKELLQIIDEKWLTYAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C C I C+
Sbjct: 186 ICKARKPGCNICPIKEYCEYY 206
>gi|330998774|ref|ZP_08322502.1| endonuclease III [Parasutterella excrementihominis YIT 11859]
gi|329576271|gb|EGG57787.1| endonuclease III [Parasutterella excrementihominis YIT 11859]
Length = 227
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 141/208 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P+PK EL Y ++F L++AV+LSAQ+TD +VN+AT+ LF +A+T
Sbjct: 1 MNQEKRLEILKALQADNPTPKTELEYHSNFELLIAVVLSAQATDKSVNEATRVLFPLANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +K + I+ IG+YR K++N++ L LI + ++P + L +LPG+G+K
Sbjct: 61 PQAVLDLGPEKFTDIIKHIGLYRSKTKNVMKLCEDLIEHHNGQVPTDFDSLIKLPGVGQK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V++++AF PTI VDTH+FR++NR G A GKTP V++ + R P ++ +AH+W +
Sbjct: 121 TASVVMNVAFEKPTIAVDTHVFRVANRTGYAKGKTPEIVQKKMERYTPLPYRADAHHWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GRY+CKARKP+C C I C+ ++
Sbjct: 181 LLGRYICKARKPECWKCPIEQYCEYKEK 208
>gi|159045563|ref|YP_001534357.1| endonuclease III [Dinoroseobacter shibae DFL 12]
gi|157913323|gb|ABV94756.1| endonuclease III [Dinoroseobacter shibae DFL 12]
Length = 214
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 147/200 (73%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F PKGEL +VN +TL+VAV LSAQ+TD VN AT+ LF+IADTP+KML
Sbjct: 10 IREIFTRFQAAEAEPKGELNHVNAYTLVVAVALSAQATDAGVNNATEALFKIADTPEKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ + +I+TIG+YR K++N+I LS IL+ ++ ++P + L LPG+GRK ANV+
Sbjct: 70 ALGEEGVIQHIKTIGLYRNKAKNVIKLSRILVEQYGGEVPNSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M +G P+ VDTHIFR+ NR G+ PGK VE+++ IP Q++AH+WL+LHGRY
Sbjct: 130 LNMWWGHPSQAVDTHIFRVGNRSGICPGKDVVAVERAIEDHIPVDFQHHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
+CKARKP C +C+I +LC+
Sbjct: 190 ICKARKPACGACLIRDLCQF 209
>gi|149194290|ref|ZP_01871387.1| Endonuclease III/Nth [Caminibacter mediatlanticus TB-2]
gi|149135465|gb|EDM23944.1| Endonuclease III/Nth [Caminibacter mediatlanticus TB-2]
Length = 214
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L TPKEL+EI F K+ K EL Y N + L+VA++LSAQ TD VN T LFE
Sbjct: 2 ILRTPKELQEIKKRFLEKYKGSKTELNYKNDYELLVAIILSAQCTDKRVNMVTPKLFEKY 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++++ I++ Y K++N+++++ I+ + F++KIP + L +LPG+G
Sbjct: 62 PNIDSLACADVEEVKECIKSCNFYNNKAKNLVAMAKIVKDTFNSKIPHEHKELIKLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV L G + VDTH+FR+ +R+G+ ++ + E+ L+ H
Sbjct: 122 NKTANVFLIELDGANRMAVDTHVFRVVHRLGITDARSVEETEKDLVEAF-KTDLNELHQA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
VL GRY+C A+ P+C+ C +S+ C
Sbjct: 181 FVLFGRYICTAKNPKCEKCFVSDFC 205
>gi|283456809|ref|YP_003361373.1| endonuclease III [Bifidobacterium dentium Bd1]
gi|283103443|gb|ADB10549.1| endonuclease III [Bifidobacterium dentium Bd1]
Length = 221
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K + + P PK L + N F L+VA +LSAQ+TD VN T LF P
Sbjct: 11 KRMHHEYEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A +++++ I +IG +R K++NII LSH L +D +P ++E LT LPG+GRK AN
Sbjct: 71 LQAADPEQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTALPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AF P VDTH+ R +P P +E+ + PP + +
Sbjct: 131 VVLGNAFDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFPPSEWTDLSHR 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L++HGR C ARKP C C +++ C
Sbjct: 191 LIMHGRTTCHARKPNCLDCPLNDTCPS 217
>gi|21674527|ref|NP_662592.1| endonuclease III [Chlorobium tepidum TLS]
gi|21647720|gb|AAM72934.1| endonuclease III [Chlorobium tepidum TLS]
Length = 213
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 135/205 (65%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+++ I S+ WP+PK EL + + F L+VA +++AQ+TD VN+ T LF+ A
Sbjct: 7 EKIAFIEKALSVIWPNPKSELNFESPFQLLVATIMAAQATDKKVNELTAVLFKAAPDAAS 66
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M + + ++ IR I Y K++NI+++S L++EF ++P + E L LPG+GRK AN
Sbjct: 67 MSRMDVEDIRTIIRPINYYNNKAKNILAMSRRLVDEFGGEVPASREALESLPGVGRKTAN 126
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AFGIP + VDTH+ R+SNRIGL P + E++L+++IP + + H++L+LHG
Sbjct: 127 VVLGNAFGIPAMPVDTHVHRVSNRIGLCKTSKPEETEEALVKVIPEEKLIDFHHYLLLHG 186
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP+C +C I +C+ ++
Sbjct: 187 RYTCKAKKPECANCAIREICEWPEK 211
>gi|322381887|ref|ZP_08055841.1| endonuclease III-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154275|gb|EFX46597.1| endonuclease III-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 221
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++ I +P EL + N F L +AVLLSAQ TD VNK T+ LF+
Sbjct: 1 MNRKQVRHILDTIGEMFPDAHCELNHSNPFELTIAVLLSAQCTDETVNKVTQGLFQKYKR 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ LA+ +L+ IR IG+YR K++NI L IL++++ ++P+ E L LPG+GRK
Sbjct: 61 PEDYLAVSLDELEQDIRRIGLYRNKAKNIQKLCRILLDQYGGEVPKKHEQLVELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AFGIP I VDTH+ R+S R+GLA K +VE+ L++ +P + H+ L
Sbjct: 121 TANVVVSNAFGIPAIAVDTHVERVSKRLGLANWKDSVLEVEKKLMKQVPEEEWTLTHHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+KP+C+ C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQKPKCEICPLPDICREGKK 209
>gi|289424319|ref|ZP_06426102.1| endonuclease III [Propionibacterium acnes SK187]
gi|289428899|ref|ZP_06430579.1| endonuclease III [Propionibacterium acnes J165]
gi|289155016|gb|EFD03698.1| endonuclease III [Propionibacterium acnes SK187]
gi|289157900|gb|EFD06123.1| endonuclease III [Propionibacterium acnes J165]
gi|327334800|gb|EGE76511.1| endonuclease III [Propionibacterium acnes HL097PA1]
gi|332674632|gb|AEE71448.1| endonuclease III [Propionibacterium acnes 266]
Length = 217
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 103/198 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
L + +P EL Y + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 3 ALLAKAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALADADIG 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+L AF
Sbjct: 63 EVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVVLGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I DTH+ R+S R+G TP KVE L + P + L+ HGR C +R
Sbjct: 123 GIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRRRCHSR 182
Query: 210 KPQCQSCIISNLCKRIKQ 227
+P C C ++ C +
Sbjct: 183 RPACGVCPVAEWCPSFGE 200
>gi|225868318|ref|YP_002744266.1| endonuclease III [Streptococcus equi subsp. zooepidemicus]
gi|225701594|emb|CAW98842.1| putative endonuclease III [Streptococcus equi subsp. zooepidemicus]
Length = 220
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L+++ + +P KGEL + F L++AV+LSAQ+TD VNK T L++
Sbjct: 5 RERLKKVLSIIGEMFPEAKGELNWDQEKPFQLLIAVILSAQTTDKAVNKVTPKLWQSYPE 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ +++++RTIG+Y+ K++NII + L+ +FD ++P+T + L LPG+GRK
Sbjct: 65 LSDLAQANVSDVEDHLRTIGLYKNKAKNIIKTAQQLLTQFDGQVPKTHKELESLPGVGRK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+L+ +G+P I VDTH+ RI+ R+ + AP ++E L+ +P K H+ L
Sbjct: 125 TANVVLAEVYGVPAIAVDTHVSRIAKRLNISAPDADVTEIEADLMAKLPKKDWIITHHRL 184
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GRY C A+ P+C SC + C K
Sbjct: 185 IFFGRYHCLAKHPKCDSCPVQGYCSYYK 212
>gi|16330354|ref|NP_441082.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|3023691|sp|P73715|END3_SYNY3 RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|1652843|dbj|BAA17762.1| endonuclease III [Synechocystis sp. PCC 6803]
Length = 219
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI + +P L Y L+VA +LSAQ TD VNK T LF+
Sbjct: 11 KKQRATEILLILKKLYPGATCSLDYQTPVQLLVATILSAQCTDERVNKVTPALFQRYPDA 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++++ I + G +R K++NI ++ EFD ++PQ +E L LPG+ RK
Sbjct: 71 NALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGEVPQRMEELLTLPGVARKT 130
Query: 141 ANVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFGI + VDTH+ R+S R+GL P ++E+ L+++IP N ++
Sbjct: 131 ANVVLAHAFGILAGVTVDTHVKRLSQRLGLTKATDPIRIERDLMKLIPQPDWENFSIHII 190
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VC ARKP C C +++LC +
Sbjct: 191 YHGRAVCAARKPLCGECQLAHLCPSAQ 217
>gi|332530205|ref|ZP_08406152.1| endonuclease III [Hylemonella gracilis ATCC 19624]
gi|332040326|gb|EGI76705.1| endonuclease III [Hylemonella gracilis ATCC 19624]
Length = 212
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 106/203 (52%), Positives = 144/203 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
TP + F P P EL Y + F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MTPAAIRSFFKTLRAANPLPVTELEYTSVFELLAAVLLSAQATDVGVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++LA+G+ L++YI+TIG+YR K+++++ IL+ ++P+T E L LPG+GRK
Sbjct: 61 PARILALGQDGLESYIKTIGLYRSKAKHLMETCRILVQRHGGQVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+ NR GLAPGKTP +VEQ LLR IP + +AH+WL+
Sbjct: 121 TANVVLNVAFGEPTMAVDTHIFRLGNRTGLAPGKTPYEVEQQLLRRIPAEFMEHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY+C ARKP+C C +S C
Sbjct: 181 LHGRYICLARKPRCWECQVSAWC 203
>gi|149195824|ref|ZP_01872881.1| endonuclease III [Lentisphaera araneosa HTCC2155]
gi|149141286|gb|EDM29682.1| endonuclease III [Lentisphaera araneosa HTCC2155]
Length = 212
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ +I + +P P L + + +TL++AVLLSAQ TD VN T LFE+AD
Sbjct: 1 MKKSEKVADILNILQKLYPKPPIPLNHKDPYTLLIAVLLSAQCTDARVNTFTPALFELAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ ++ IR G+ +KS+ I LS IL+ + ++P + L LPG+G
Sbjct: 61 NPFDMMHKDVDDIKAIIRPCGLSPRKSKAISELSRILVEKHQGQVPCDFDALEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AF +P VDTHI R++ R GL+ GK+ + E+ L R+ P + H +
Sbjct: 121 KTASVVMSQAFEVPAFAVDTHIHRLAYRWGLSTGKSVEQTEKDLKRLFPKETWIALHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GR C AR Q+C I ++ ++
Sbjct: 181 IYFGREFCPARGHDPQACPICSI--YGRK 207
>gi|304320418|ref|YP_003854061.1| Nth, endonuclease III [Parvularcula bermudensis HTCC2503]
gi|303299320|gb|ADM08919.1| Nth, endonuclease III [Parvularcula bermudensis HTCC2503]
Length = 221
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 147/210 (70%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T ++ E++ + P+PK EL Y + +TL+VAV LSAQ+TDV+VNKAT LF
Sbjct: 1 MPRPLTRAQIAELYRRLAEDRPTPKTELNYDSAYTLLVAVALSAQATDVSVNKATGPLFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+A TP+ M+A+GE +L +YI+TIG++R K++N+I LS L++++ ++P L +LPG
Sbjct: 61 VASTPEAMVALGEDRLASYIKTIGLWRTKAKNVIGLSQKLLDDYGGEVPADRGALQQLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK A+V+++ F TI VDTHIFR+SNR GLA GKTP+ V LL++ PP ++ AH
Sbjct: 121 VGRKTADVVMNEIFDAETIAVDTHIFRVSNRTGLAIGKTPDAVGDRLLKVTPPAYRKGAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+WL+LHGRYVCKAR P C +C++ C
Sbjct: 181 HWLILHGRYVCKARTPACGACVLREGCCHF 210
>gi|49486292|ref|YP_043513.1| putative endonuclease [Staphylococcus aureus subsp. aureus MSSA476]
gi|49244735|emb|CAG43171.1| putative endonuclease [Staphylococcus aureus subsp. aureus MSSA476]
Length = 219
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP ++H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNSSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|308235660|ref|ZP_07666397.1| endonuclease III [Gardnerella vaginalis ATCC 14018]
Length = 233
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ E + + + P+PK L + N F L++A +LSAQ+TD VN T+ LF TP+
Sbjct: 24 ARMSEEYRILCEEIPNPKCALNFTNPFELLIATVLSAQATDRRVNIVTEQLFRTYPTPKD 83
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ K+Q I +G YR KS++II LS L+++F+ +P ++ LT+LPG+GRK AN
Sbjct: 84 LARAPIYKVQEIIHQLGFYRVKSQHIIELSQKLMDDFNGVVPNNMDDLTKLPGVGRKTAN 143
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AFGIP VDTH+ R+++R+ P KVE+ + PP+ N +
Sbjct: 144 VVLGNAFGIPGFPVDTHVMRVTSRLRWRSDWKIAKSDPIKVEREITSYFPPEEWTNLSHR 203
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGR +C AR P C C + LC +
Sbjct: 204 LILHGRKICTARNPHCADCPLRFLCPSV 231
>gi|226324116|ref|ZP_03799634.1| hypothetical protein COPCOM_01894 [Coprococcus comes ATCC 27758]
gi|225207665|gb|EEG90019.1| hypothetical protein COPCOM_01894 [Coprococcus comes ATCC 27758]
Length = 213
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + LF
Sbjct: 1 MTKKQRTLEVIERLRKEYPDADCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEGLFAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + ++ IR G+ + K+ +I + +L +E+ KIP+ + +LPG+GR
Sbjct: 61 TVEALAEADVNNIEEIIRPCGLGKSKARDISACMKMLRDEYGGKIPKDFNAILKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE L +++PP+ + +
Sbjct: 121 KSANLIMGDVFGEPAIVTDTHCIRLVNRIGLVDGIKDPKKVEMELWKLVPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
LV HGR VC AR KP C C ++++CK++
Sbjct: 181 LVYHGREVCTARTKPHCDRCCLADICKKV 209
>gi|325264606|ref|ZP_08131336.1| endonuclease III [Clostridium sp. D5]
gi|324030268|gb|EGB91553.1| endonuclease III [Clostridium sp. D5]
Length = 208
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K EI + ++ L + + L++A +LSAQ TD VN TK LF+ DT
Sbjct: 2 KKRTGEILSILDEQYGREYVCYLNHETPWQLLIATMLSAQCTDARVNIVTKDLFQKYDTV 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K ++L+ I+ G Y K++NII+ + LIN F ++P++LE LT L G+GRK
Sbjct: 62 EKFANADLEELEQDIKPTGFYHTKAKNIIACTRALINRFGGEVPRSLEDLTSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + P++ VDTH+ RIS R+GL + P K+EQ L++ +P H + ++
Sbjct: 122 ANVIRGNIYYEPSVVVDTHVKRISKRLGLTKHEDPEKIEQDLMKELPKDHWILYNIQIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C AR P+C C + CK K
Sbjct: 182 FGRSICTARSPKCGECFLQKYCKEYK 207
>gi|255010748|ref|ZP_05282874.1| putative endonuclease [Bacteroides fragilis 3_1_12]
gi|313148555|ref|ZP_07810748.1| endonuclease III [Bacteroides fragilis 3_1_12]
gi|313137322|gb|EFR54682.1| endonuclease III [Bacteroides fragilis 3_1_12]
Length = 225
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T +++
Sbjct: 1 MTKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPKIYQDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ KS++++ ++ +L+++F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVSDFNSEVPGTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P VE+ L + IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVGDACTTPFSVEKELTKNIPNELIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C++C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCETCGLQLMCKYY 209
>gi|269122255|ref|YP_003310432.1| endonuclease III [Sebaldella termitidis ATCC 33386]
gi|268616133|gb|ACZ10501.1| endonuclease III [Sebaldella termitidis ATCC 33386]
Length = 219
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++F + K+ P L Y + L++AV+LSAQ TDV VN TK LF+I
Sbjct: 1 MTKKERFNKVFPILEQKFQVPITALNYETPYQLLIAVILSAQCTDVRVNIVTKELFKIVK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + + K+++ +IR+ G Y+ K++NI S L+ +++ ++P T+E L L G+GR
Sbjct: 61 GPKDLAEMDLKEIEKHIRSTGFYKNKAKNIQMCSRQLLEKYNGEVPNTMEELRGLAGVGR 120
Query: 139 KGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SNRIG P +E+ L++ IP KH + ++
Sbjct: 121 KTANVVLGDIWNIREGIVVDTHVKRLSNRIGFVKSDNPEIIEKELMKFIPKKHWFEYSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+LHGR C ARKP+C+ C I CK +
Sbjct: 181 LILHGRDKCIARKPKCEICEIKEYCKYYE 209
>gi|189499467|ref|YP_001958937.1| endonuclease III [Chlorobium phaeobacteroides BS1]
gi|189494908|gb|ACE03456.1| endonuclease III [Chlorobium phaeobacteroides BS1]
Length = 220
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 124/207 (59%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ I ++PSPK EL+Y F +++A +L+AQ+TD VN T LF
Sbjct: 12 SKPKIALIDAALGTQYPSPKSELHYSTPFQMLIATILAAQATDKRVNVITAELFSRCPDA 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M I +L+ IR+I Y K++NI++ S +L+ + ++P T E L LPG+GRK
Sbjct: 72 ESMSRIELDELKTIIRSINYYNNKAKNILAASRMLVESYKGEVPSTREKLESLPGVGRKT 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
AN++LS AFG P + VDTH+ R++NRIGL K P + E +L+ IP + N H++LVL
Sbjct: 132 ANIVLSNAFGQPVMAVDTHVHRVANRIGLVKTKKPRETEDALIAAIPAELVINFHHYLVL 191
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGRY CKARKP C C + C +
Sbjct: 192 HGRYTCKARKPLCTKCPVLPACDYENK 218
>gi|317506667|ref|ZP_07964457.1| endonuclease III [Segniliparus rugosus ATCC BAA-974]
gi|316255050|gb|EFV14330.1| endonuclease III [Segniliparus rugosus ATCC BAA-974]
Length = 236
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + +PLG + + ++ +P EL + + L+VA +LSAQ+TDV V
Sbjct: 4 ASPTKTRAPLGLVR---RARRMSRELAVLFPDAHCELDFKSPLELLVATVLSAQTTDVRV 60
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T LF T + + ++ IRTIG++R K+ N+I + L + F ++P T
Sbjct: 61 NMVTPALFARYRTAKDYAEAKQADVEELIRTIGLFRAKAANLIGIGAALCDRFGGEVPGT 120
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L L LPG+GRK ANV+L AFG+P + VDTH R+ R P K+E ++ +I
Sbjct: 121 LRELVTLPGVGRKTANVVLGNAFGVPGLTVDTHFGRLVGRWKWTEETDPVKIEFAVGALI 180
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + ++ GR VC +++P C +C ++ C
Sbjct: 181 ERKDWTALSHRVIWFGRSVCHSQRPACGACPLARDCPSY 219
>gi|326316420|ref|YP_004234092.1| endonuclease III [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373256|gb|ADX45525.1| endonuclease III [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 212
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 138/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++E F P P EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A T
Sbjct: 1 MKTAQIEPFFAALKAANPQPNTELEYTTVFELLAAVLLSAQATDVGVNKATRKLFPVAGT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG+YR K+ +++ IL+ +P+T E L LPG+GRK
Sbjct: 61 PQAILDLGLEGLEGYIKTIGLYRSKARHLMETCRILVERHGGIVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR GLAPGK P VE LL+ +P ++ ++H+WL+
Sbjct: 121 TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLAVEMQLLKRVPAEYAVDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+C C+++ C
Sbjct: 181 LLGRYVCQARKPRCWECVVAPWCDY 205
>gi|182680010|ref|YP_001834156.1| endonuclease III [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635893|gb|ACB96667.1| endonuclease III [Beijerinckia indica subsp. indica ATCC 9039]
Length = 252
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 120/220 (54%), Positives = 162/220 (73%), Gaps = 5/220 (2%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+S K+ + P E+ EIF F+ P P+GELY VN FT ++AV+LSAQ+T
Sbjct: 31 ASAKTRKAKAKLPDL-----AEVAEIFRRFAAADPHPEGELYSVNDFTFLIAVVLSAQAT 85
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VNKATK LF IAD+P+KMLA+GE KL++ I+TIG+Y+ K++NI++L LI + +
Sbjct: 86 DAGVNKATKALFAIADSPEKMLALGEDKLRDMIKTIGLYQAKAKNIMALCANLIENYGGQ 145
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P E L L G+GRK ANV+L++AFG PTI VDTHIFR+SNRI LA GKTP VEQ L
Sbjct: 146 VPHDREALQSLAGVGRKTANVVLNIAFGEPTIAVDTHIFRVSNRIPLAIGKTPLAVEQGL 205
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+I+PP+++ +AH WL+LHGR+VCKAR+P+C+ CIIS+LC
Sbjct: 206 EKIVPPEYKLHAHVWLILHGRHVCKARRPECERCIISDLC 245
>gi|56751080|ref|YP_171781.1| DNA-(apurinic or apyrimidinic site) lyase [Synechococcus elongatus
PCC 6301]
gi|81299258|ref|YP_399466.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Synechococcus elongatus PCC 7942]
gi|24414816|emb|CAD55629.1| DNA-(apurinic or apyrimidinic site) lyase [Synechococcus elongatus
PCC 7942]
gi|56686039|dbj|BAD79261.1| DNA-(apurinic or apyrimidinic site) lyase [Synechococcus elongatus
PCC 6301]
gi|81168139|gb|ABB56479.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Synechococcus elongatus PCC 7942]
Length = 228
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
L + + +P L Y L+VA +LSAQ TD VN T LF
Sbjct: 4 PRLSKKQRALAVLAELKQLYPEAPCSLDYETPLQLLVATILSAQCTDARVNLVTPALFAR 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A +++ IR+ G YR K++NI + S ++ + ++PQ++ L L G+
Sbjct: 64 FPDAPAFAAADVGEIEELIRSTGFYRNKAKNIHAASRRIVEVYGGEVPQSMPELLTLAGV 123
Query: 137 GRKGANVILSMAFGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
RK ANV+L+ AFGI DTH+ R++NR+G P K+EQ L++++P N
Sbjct: 124 ARKTANVVLAHAFGINAGVTVDTHVKRLANRLGFTTHTDPIKIEQDLMKLLPQPDWENWS 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LV HGR VC ARKP C C +++ C ++
Sbjct: 184 IRLVYHGRAVCDARKPACDRCSLADHCSTFRR 215
>gi|78184582|ref|YP_377017.1| endonuclease III/Nth [Synechococcus sp. CC9902]
gi|78168876|gb|ABB25973.1| Endonuclease III/Nth [Synechococcus sp. CC9902]
Length = 217
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 114/202 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + +P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRKAERAQLVLERLNQHYPETPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A+ E ++ ++IR +G+ + K++++ LS +LI+E D +P + L LPG+G
Sbjct: 61 TPQAMAALDETEILSFIRQLGLAKTKAKHVRRLSELLISEHDGAVPNSFRALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL+ G + + EQ L R+ P H H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSNGSSVSTTEQDLKRLFPKSHWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGREYCSARGCNGTICPLCK 202
>gi|167630835|ref|YP_001681334.1| endonuclease iii [Heliobacterium modesticaldum Ice1]
gi|167593575|gb|ABZ85323.1| endonuclease iii [Heliobacterium modesticaldum Ice1]
Length = 203
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 124/191 (64%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+P + L + N F L++A +L+AQ+TD +VN+ T LF A TP+ ML + +++L++
Sbjct: 1 MYPDARCALNFRNPFELLIATMLAAQATDKSVNRVTPALFAKAPTPEAMLLLTQEELEDL 60
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I++IG+YR K NI++ IL+ + ++P EGL +LPG+GRK ANV+L+ AF P I
Sbjct: 61 IKSIGLYRNKGRNILAACRILVEKHGGQVPGYREGLEKLPGVGRKTANVVLAEAFQEPAI 120
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH+FR+SNR+GLA K K EQ L+ IP AH+WL+ HGR VC ARKP C
Sbjct: 121 AVDTHVFRVSNRLGLAQAKDVVKTEQDLMNNIPRDLWAKAHHWLIFHGRQVCHARKPACG 180
Query: 215 SCIISNLCKRI 225
C ++ C+
Sbjct: 181 VCRLAECCREY 191
>gi|171742064|ref|ZP_02917871.1| hypothetical protein BIFDEN_01168 [Bifidobacterium dentium ATCC
27678]
gi|171277678|gb|EDT45339.1| hypothetical protein BIFDEN_01168 [Bifidobacterium dentium ATCC
27678]
Length = 209
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ P PK L + N F L+VA +LSAQ+TD VN T LF P + A
Sbjct: 5 YEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPVLFGRFPGPADLQAADP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++++ I +IG +R K++NII LSH L +D +P ++E LT LPG+GRK ANV+L A
Sbjct: 65 EQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F P VDTH+ R +P P +E+ + PP + + L++HGR
Sbjct: 125 FDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFPPSEWTDLSHRLIMHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C ARKP C C +++ C
Sbjct: 185 TTCHARKPNCLDCPLNDTCPS 205
>gi|87198032|ref|YP_495289.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Novosphingobium aromaticivorans DSM 12444]
gi|87133713|gb|ABD24455.1| DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium
aromaticivorans DSM 12444]
Length = 231
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++ E F + PSP+ EL + N + L+VAV LSAQ+TDV VNKAT+ LF+I T
Sbjct: 1 MTRDQIFEFFRRLAEANPSPETELEFGNVYQLLVAVTLSAQATDVGVNKATRKLFQIVKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +GE+ L+ +I+TIG++ K+ N+++++ IL+ E ++P + LT LPG+GRK
Sbjct: 61 PQDMLDLGEEGLKEHIKTIGLFNSKARNVMAMAEILVREHGGEVPADRDLLTALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG T VDTHIFR+ NR GLA GKTP VE+ L R +P + AH+WL+
Sbjct: 121 TANVVLNCAFGAETFAVDTHIFRVGNRTGLAKGKTPLAVEKQLERKVPGPFRVGAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P+C C + +LC +
Sbjct: 181 LHGRYVCKARTPECWHCGVVDLCGYKAK 208
>gi|288560832|ref|YP_003424318.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
gi|288543542|gb|ADC47426.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
Length = 215
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 2/207 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +++ EIF + + + + + +++ +LS ++ D N ++A LFE+
Sbjct: 5 KMNDEEKIREIFRRLNEVY--TIRTFHDHDPYKVLIRTILSQRTRDENTDQAANALFEVY 62
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + +Q I+ G YR K+ I+ +S ILI+++ ++P+ ++ + +LPG+G
Sbjct: 63 PDIYAVADAPVEHVQELIKPAGFYRVKAARILEVSRILIDQYGGEVPREMDEMLKLPGVG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK AN ++ AF I VDTH+ RISNR G+A K P + EQ L+ +P + +
Sbjct: 123 RKTANCVIVFAFQDAAIPVDTHVHRISNRWGIADTKDPEETEQVLMEKVPKDLWVDLNDL 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
+V G+ +C+ PQC C IS+LC
Sbjct: 183 MVQFGQTICRPIGPQCDKCPISDLCDY 209
>gi|311115205|ref|YP_003986426.1| endonuclease III [Gardnerella vaginalis ATCC 14019]
gi|310946699|gb|ADP39403.1| endonuclease III [Gardnerella vaginalis ATCC 14019]
Length = 227
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ E + + + P+PK L + N F L++A +LSAQ+TD VN T+ LF TP+
Sbjct: 18 ARMSEEYRILCEEIPNPKCALNFTNPFELLIATVLSAQATDRRVNIVTEQLFRTYPTPKD 77
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ K+Q I +G YR KS++II LS L+++F+ +P ++ LT+LPG+GRK AN
Sbjct: 78 LARAPIYKVQEIIHQLGFYRVKSQHIIELSQKLMDDFNGVVPNNMDDLTKLPGVGRKTAN 137
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AFGIP VDTH+ R+++R+ P KVE+ + PP+ N +
Sbjct: 138 VVLGNAFGIPGFPVDTHVMRVTSRLRWRSDWKIAKSDPIKVEREITSYFPPEEWTNLSHR 197
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGR +C AR P C C + LC +
Sbjct: 198 LILHGRKICTARNPHCADCPLRFLCPSV 225
>gi|253580497|ref|ZP_04857762.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848227|gb|EES76192.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 215
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y N + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKQELALEVIERLKKEYPDADCTLDYDNAWKLLVSVRLAAQCTDARVNVVVQDLYAKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + +++ +R G+ + K+ +I + IL ++ + +P + L +LPG+GR
Sbjct: 61 TVEALANADVADIESIVRPCGLGKSKARDISACMKILHEQYHDNVPGDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+SNRIGL P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLSNRIGLVDNMKEPKKVEMALWKIIPPEEGNDLCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP C C ++++C++
Sbjct: 181 LVNHGRDVCTARTKPYCDRCCLNDICEK 208
>gi|78356536|ref|YP_387985.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218941|gb|ABB38290.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 226
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L ++P+P L + L+VA +L+AQ TD VNK T LF
Sbjct: 1 MKKKERAAAFLALLKKRYPAPATHLDARTPWELLVATVLAAQCTDERVNKVTPGLFRRWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P ++ + +++ + + G YR K++N+I+ + ++ ++P+T++ LT LPG+ R
Sbjct: 61 GPAELAQALQGEVEEVVHSTGFYRNKAKNLIAAADMVTRLHGGQVPRTMDELTALPGLAR 120
Query: 139 KGANVILSMAFGIPTI-GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L +GI VDTH+ RI+ R+G P VE+ L+ + P + ++
Sbjct: 121 KTANIVLWGGYGINEGLAVDTHVKRIAFRMGFTASDNPVVVEKDLMPLFPRAEWGDVNHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
+V GR+VC ARKP C C + + C R
Sbjct: 181 MVWFGRHVCDARKPLCHECEMFDFCPR 207
>gi|295129793|ref|YP_003580456.1| endonuclease III [Propionibacterium acnes SK137]
gi|291375933|gb|ADD99787.1| endonuclease III [Propionibacterium acnes SK137]
Length = 217
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 102/198 (51%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
L + +P EL Y + L+VA +LSAQ+TD VN T LF P +
Sbjct: 3 ALLAKAYPDAHCELNYAGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPLALADADIG 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+L AF
Sbjct: 63 EVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVVLGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I DTH+ R+S R+G TP KVE L + P + L+ HGR C +R
Sbjct: 123 GIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRRRCHSR 182
Query: 210 KPQCQSCIISNLCKRIKQ 227
+P C C ++ C +
Sbjct: 183 RPACGVCPVAEWCPSFGE 200
>gi|212704718|ref|ZP_03312846.1| hypothetical protein DESPIG_02781 [Desulfovibrio piger ATCC 29098]
gi|212671845|gb|EEB32328.1| hypothetical protein DESPIG_02781 [Desulfovibrio piger ATCC 29098]
Length = 222
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 118/217 (54%), Gaps = 4/217 (1%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
S + + P G L E++ ++P P L N + L+VA +L+AQ TD VN
Sbjct: 2 SAKKSLPRGAL---ARAEKVLAALQARYPRPATHLEADNAWELLVATVLAAQCTDARVNT 58
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF P ++ +++L++ IR+ G Y K+ N++ + +++ + ++P L+
Sbjct: 59 VTPELFRRWPGPAELALATQEELESVIRSTGFYHSKARNLLGAAQRVVSVYGGEVPPRLD 118
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
L LPG+ RK ANV+L AFGI VDTH+ RIS R+GL P +EQ L+R+ P
Sbjct: 119 ELITLPGVARKTANVVLFGAFGINEGLAVDTHVKRISYRLGLTAHTDPVDIEQDLMRLFP 178
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ +V GR VC AR P+C C +++ C R
Sbjct: 179 RAEWGDVNHRMVWFGRDVCHARSPRCTECEMADFCPR 215
>gi|148284927|ref|YP_001249017.1| endonuclease III [Orientia tsutsugamushi str. Boryong]
gi|146740366|emb|CAM80803.1| Endonuclease III [Orientia tsutsugamushi str. Boryong]
Length = 212
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 109/206 (52%), Positives = 151/206 (73%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++E+IF F+ + P PK EL Y NHFTL+VAV+LSAQSTD VNKATK LF+ T
Sbjct: 1 MIIDKIEKIFAKFAERCPEPKTELEYCNHFTLLVAVILSAQSTDNAVNKATKELFKYYKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P++ L +GE+ L+ +I++IG+Y K++NII LS IL+ E++ ++P T++ L LPG+GRK
Sbjct: 61 PEQFLQLGEENLKKHIKSIGLYNNKAKNIIKLSEILVKEYNGQVPNTMKELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS AFG+ T+ VDTH+FR++ RIGLA G TP KVE LL +IP + AH+WLV
Sbjct: 121 SANVVLSCAFGVATMPVDTHVFRVAKRIGLATGATPLKVENELLSVIPDRWLLLAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
LHGRY+CKA+ P+C C ++N C+
Sbjct: 181 LHGRYICKAQTPKCSECFLNNYCQYF 206
>gi|251796488|ref|YP_003011219.1| endonuclease III [Paenibacillus sp. JDR-2]
gi|247544114|gb|ACT01133.1| endonuclease III [Paenibacillus sp. JDR-2]
Length = 233
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I + +P EL++ N F L +AVLLSAQ TD VNK T +LF+
Sbjct: 1 MNAKQKMRHILDTLAEMFPDAHCELHHSNPFELTIAVLLSAQCTDETVNKVTVNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++L+ IR IG++R K+ NI L ILI++++ ++P+ E LT LPG+GR
Sbjct: 61 RPEDYLAVPLEELEQDIRRIGLFRSKASNIQKLCRILIDKYEGEVPERHEQLTELPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S AFG+P I VDTH+ R+S R+G+A T +VE+ L++++P + H+
Sbjct: 121 KTANVVVSNAFGVPAIAVDTHVERVSKRLGMAKLDDTVLEVEKKLMKLVPREEWTLTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ PQC C + ++CK KQ
Sbjct: 181 LIFFGRYHCKAQNPQCPICPLLDMCKEGKQ 210
>gi|253732094|ref|ZP_04866259.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724141|gb|EES92870.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 219
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMVDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|254513839|ref|ZP_05125900.1| endonuclease III [gamma proteobacterium NOR5-3]
gi|219676082|gb|EED32447.1| endonuclease III [gamma proteobacterium NOR5-3]
Length = 217
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 114/204 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I +P L + + FTL+VAVLLSAQ TD VN+ T LF A
Sbjct: 1 MLKAERARYILQRLQELYPETPVPLDHSDPFTLLVAVLLSAQCTDERVNQVTPALFARAA 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP ML + ++++ YIR G+ +K++ I LS ILI E +PQ ++ L RLPG+G
Sbjct: 61 TPMAMLELSVEEIREYIRPCGLSPQKAKAIAGLSKILIEEHAGMVPQDMDALERLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL+ GK + E+ L ++ P +H H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSSGKNVTQTERDLKKLFPREHWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR + C I C
Sbjct: 181 IFYGREFCSARGCDGRVCEICRYC 204
>gi|296166731|ref|ZP_06849155.1| endonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897901|gb|EFG77483.1| endonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 226
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 103/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P EL + L VA +LSAQSTD VN T LF+ +
Sbjct: 3 RALAQAFPDAHCELDFTTPLELTVATILSAQSTDKRVNLTTPALFKRYPSALDYAQADRG 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L+N IR G +R K+ ++I L L+ FD ++P T+E L LPG+GRK ANVIL AF
Sbjct: 63 ELENLIRPTGFFRNKATSLIGLGQALVERFDGEVPSTMEDLVTLPGVGRKTANVILGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
G+P I VDTH R+ +R K P K+E++ +I + ++ HGR VC AR
Sbjct: 123 GVPGITVDTHFARLVHRWRWTADKDPVKIERAAGDLIERSEWTMLSHRVIFHGRRVCHAR 182
Query: 210 KPQCQSCIISNLCKRI 225
KP C C+++ C
Sbjct: 183 KPACGVCVVAKDCPSF 198
>gi|255693170|ref|ZP_05416845.1| endonuclease III [Bacteroides finegoldii DSM 17565]
gi|260621061|gb|EEX43932.1| endonuclease III [Bacteroides finegoldii DSM 17565]
Length = 225
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L++
Sbjct: 1 MRKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPTLYKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+N+F +++P LE LT+LPG+GR
Sbjct: 61 TPEALAATTPEVVFEYIRSVSYPNNKAKHLVGMAKMLVNDFQSQVPDNLEDLTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELIKNIPEELIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCATCGLQMICKYF 209
>gi|223043195|ref|ZP_03613242.1| endonuclease III [Staphylococcus capitis SK14]
gi|314933636|ref|ZP_07841001.1| endonuclease III [Staphylococcus caprae C87]
gi|222443406|gb|EEE49504.1| endonuclease III [Staphylococcus capitis SK14]
gi|313653786|gb|EFS17543.1| endonuclease III [Staphylococcus caprae C87]
Length = 219
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD VN+ T+ LFE
Sbjct: 1 MISKKKALEMIDVIANMFPDAECELKHDNAFELTIAVLLSAQCTDNLVNRVTRSLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L L+++FD +IP+T + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCRSLLDQFDGRIPETHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L IIP + +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCDIIPRERWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLDDCREGQK 210
>gi|319404992|emb|CBI78601.1| endonuclease III [Bartonella sp. AR 15-3]
Length = 226
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 109/202 (53%), Positives = 154/202 (76%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E+ EIF FS++ P+PK +L Y N FTL+VAV+LSAQ+TD +VNK TK LF +AD P+K
Sbjct: 2 DEIAEIFRRFSIQRPTPKSDLSYTNVFTLLVAVVLSAQTTDASVNKVTKKLFSLADRPEK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M+ +G++ + ++IR IG++R K+ NI +L LI+++ ++P + E L LPG+GRK AN
Sbjct: 62 MIILGKEGIAHHIRAIGLWRAKAHNIYALCCRLIDQYGGQVPDSREELMTLPGVGRKTAN 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
VIL++AFG PT+ VDTHIFR+ NR+G A GKTP +VE+ L++IIP + AH+WL+LHG
Sbjct: 122 VILNIAFGQPTMAVDTHIFRLGNRLGFASGKTPEEVEEKLVKIIPDCYLQCAHHWLILHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RY+CKARK +C CII++LCK
Sbjct: 182 RYICKARKVECVQCIIADLCKA 203
>gi|295088002|emb|CBK69525.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Bacteroides xylanisolvens XB1A]
Length = 225
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L++
Sbjct: 1 MRKKERYEKVIAWFQDNVPVAETELHYNNPYELLIAVILSAQCTDKRVNIITPPLYKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+N+F++++P L+ L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSQVPDNLDDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP K AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARAPKCDTCGLQMMCKYF 209
>gi|150004779|ref|YP_001299523.1| endonuclease III [Bacteroides vulgatus ATCC 8482]
gi|254883017|ref|ZP_05255727.1| endonuclease III [Bacteroides sp. 4_3_47FAA]
gi|294778356|ref|ZP_06743779.1| endonuclease III [Bacteroides vulgatus PC510]
gi|319641861|ref|ZP_07996538.1| endonuclease III [Bacteroides sp. 3_1_40A]
gi|149933203|gb|ABR39901.1| endonuclease III [Bacteroides vulgatus ATCC 8482]
gi|254835810|gb|EET16119.1| endonuclease III [Bacteroides sp. 4_3_47FAA]
gi|294447618|gb|EFG16195.1| endonuclease III [Bacteroides vulgatus PC510]
gi|317386534|gb|EFV67436.1| endonuclease III [Bacteroides sp. 3_1_40A]
Length = 214
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ F P + EL+Y N F L++AV+LSAQ TD VN T L+
Sbjct: 1 MKKQELYNKVIAYFQEAMPVAETELHYNNPFELLIAVILSAQCTDKRVNMITPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F +++P TLE L +LPG+GR
Sbjct: 61 TPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFHSEVPGTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLMKYIPKEIVPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRYVC AR P+C C ++ LC+
Sbjct: 181 WLILHGRYVCVARTPKCSECGLNGLCRY 208
>gi|172057780|ref|YP_001814240.1| endonuclease III [Exiguobacterium sibiricum 255-15]
gi|171990301|gb|ACB61223.1| endonuclease III [Exiguobacterium sibiricum 255-15]
Length = 222
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++E I +P EL + N F L+VAV LSAQ+TDV VNK T LF
Sbjct: 1 MLRKSDIERIESTLEEMFPEAFCELIHQNPFELVVAVALSAQATDVLVNKVTPGLFAAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP ++ A ++++ I+ +G+YR K++NI +L+ L+ ++P GL LPG+GR
Sbjct: 61 TPDRLAAAPVEEIEEKIKRLGLYRNKAKNIKALAEQLLVLHGGEVPTDRAGLEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF +P VDTH+ R+S R+G+ +VEQ+L++ + H+
Sbjct: 121 KTANVVLSVAFDVPAFAVDTHVERVSKRLGICRWKDNVMQVEQTLMKRFKRERWSKLHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA++P C C + ++C+ K+
Sbjct: 181 FIFFGRYHCKAQRPNCLECPLLDMCREGKK 210
>gi|225410189|ref|ZP_03761378.1| hypothetical protein CLOSTASPAR_05411 [Clostridium asparagiforme
DSM 15981]
gi|225042293|gb|EEG52539.1| hypothetical protein CLOSTASPAR_05411 [Clostridium asparagiforme
DSM 15981]
Length = 261
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
K + + + +EI ++P L Y + L+V+V L+AQ TD
Sbjct: 30 AKRRKTKEIRRETAMTKEELAKEIVNRLKKEYPDVGCTLDYDQAWKLLVSVRLAAQCTDA 89
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VN + L+ + ++++ ++ G+ K+++I IL +++ K+P
Sbjct: 90 RVNVVVQDLYAKYPDVNALADAPVEEIERIVKPCGLGHSKAKDISGCMKILRDQYGGKVP 149
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL 183
+ L +LPG+GRK AN+I+ FG P I DTH R+ NR+GL G P KVE +L
Sbjct: 150 DDFDALLKLPGVGRKSANLIIGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALW 209
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
++IP + + + LV HGR VC AR KP C+ C + ++C ++
Sbjct: 210 KLIPGEESNDFCHRLVFHGRDVCTARTKPHCERCCLKDVCAKV 252
>gi|254413081|ref|ZP_05026853.1| endonuclease III [Microcoleus chthonoplastes PCC 7420]
gi|196180245|gb|EDX75237.1| endonuclease III [Microcoleus chthonoplastes PCC 7420]
Length = 219
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI +P L Y L+VA +LSAQ TD VN+ T LF
Sbjct: 10 KQQRALEILIRLKRLYPDAHCTLNYDTPVQLLVATILSAQCTDERVNQVTPELFRQFPNA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + L+ +R G YR K++NI +++ EF +IP+ +E L +LPG+ RK
Sbjct: 70 RAIAQADIEVLEALVRPTGFYRNKAKNIQGACRMIVAEFGGQIPRRIELLIKLPGVARKT 129
Query: 141 ANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF + VDTH+ R++ R+GL P ++E+ L+R++P + N L+
Sbjct: 130 ANVVLANAFDIHEGVTVDTHVKRLTQRLGLTEHSDPIRIERDLMRLLPMEDWENWSIRLI 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +C+A+KP+C +C++++LC +
Sbjct: 190 YHGRAICQAKKPKCDACLLADLCPSAR 216
>gi|56698403|ref|YP_168776.1| endonuclease III [Ruegeria pomeroyi DSS-3]
gi|56680140|gb|AAV96806.1| endonuclease III [Ruegeria pomeroyi DSS-3]
Length = 214
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 148/200 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTP+KML
Sbjct: 10 IREIFTRFQAADPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRELFKIADTPEKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ + +I+TIG++R+K++N+I LS IL+ ++ ++P + L LPG+GRK ANV+
Sbjct: 70 ALGEEGVTEHIKTIGLFRQKAKNVIKLSRILVEQYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + IP VDTHIFR+ NR G+ PGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRIPAQAVDTHIFRVGNRTGICPGKDVDTVERAIEDNIPADFQQHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +C+I +LC+
Sbjct: 190 HCKARKPMCGTCLIRDLCQF 209
>gi|196228084|ref|ZP_03126951.1| endonuclease III [Chthoniobacter flavus Ellin428]
gi|196227487|gb|EDY21990.1| endonuclease III [Chthoniobacter flavus Ellin428]
Length = 213
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E + + + +P EL Y N L++A +LSAQ TD VN TK LF
Sbjct: 1 MTRAERAEAVCQILARTYPDAHCELDYTNPLELLIATILSAQCTDKRVNIVTKDLFRTCH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T +A+ +++L+++I+T G YR K++NI + L+ + +P+T++ LT L G+GR
Sbjct: 61 TAADYVALPQEQLEDFIKTAGFYRSKAKNIKACCQGLVEKHGGDVPRTMDDLTALAGVGR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L A+ I + VDTH+ R+S R+GL P K+EQ L++++P +W
Sbjct: 121 KTANVVLGNAYDINIGVVVDTHVQRLSARLGLTKHADPVKIEQDLMKLVPQDKWTLFSHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR C ARKP C C + +C +
Sbjct: 181 LIWHGRRRCYARKPDCPGCELKEICPSAGK 210
>gi|154505234|ref|ZP_02041972.1| hypothetical protein RUMGNA_02748 [Ruminococcus gnavus ATCC 29149]
gi|153794432|gb|EDN76852.1| hypothetical protein RUMGNA_02748 [Ruminococcus gnavus ATCC 29149]
Length = 208
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K +EI + ++ L Y + L++A +LSAQ TD VN T LF+ DT
Sbjct: 2 KKRTKEILAILDEQYGREYVCYLNYETPWQLLIATMLSAQCTDARVNIVTADLFQKYDTL 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K K+L+ I+ G Y K++NII+ + L+ F ++P++LE LT L G+GRK
Sbjct: 62 EKFANADLKELEQDIKPTGFYHNKAKNIIACTRDLLYRFGGEVPRSLEDLTSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + P++ VDTH+ RIS R+GL + P K+E L++ +P H + ++
Sbjct: 122 ANVIRGNIYHDPSVVVDTHVKRISRRLGLTKNEDPEKIETDLMKELPKDHWILYNIQIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C AR P+C+ C + CK K
Sbjct: 182 FGRSICTARSPKCEQCFLQKYCKEFK 207
>gi|153808497|ref|ZP_01961165.1| hypothetical protein BACCAC_02791 [Bacteroides caccae ATCC 43185]
gi|149128819|gb|EDM20036.1| hypothetical protein BACCAC_02791 [Bacteroides caccae ATCC 43185]
Length = 225
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L+
Sbjct: 1 MRKKERYEKVIAWFQENVPVAETELHYNNPYELLIAVILSAQCTDKRVNIITPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+NEF++++P +E L +LPG+GR
Sbjct: 61 TPEALAATTPEVVFEYIRSVSYPNNKAKHLVGMAKMLVNEFNSQVPDNMEDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP K AH+
Sbjct: 121 KTANVIQSVVFHKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELMKNIPEKLVPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKYF 209
>gi|300867997|ref|ZP_07112636.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Oscillatoria sp. PCC 6506]
gi|300334018|emb|CBN57814.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Oscillatoria sp. PCC 6506]
Length = 219
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI +P L Y L+VA +LSAQ TD VNK T LF+
Sbjct: 8 RQRSLEILIRLKRLYPDAPCTLNYETPVQLLVATILSAQCTDERVNKVTPALFQRFPDTA 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M ++L+N +R+ G YR K++NI + H+++ +F+ ++P+ +E L LPG+ RK A
Sbjct: 68 AMAIADIEELENLVRSTGFYRNKAKNIKAACHLIVEKFNGEVPKRMELLLELPGVARKTA 127
Query: 142 NVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+ + VDTH+ R+SNR+GL P ++E+ L++++P N LV
Sbjct: 128 NVVLAHAYGINMGVTVDTHVKRLSNRLGLTEHADPIRIERDLMKLLPQPDWENWSIRLVY 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR +C AR P C C +++LC
Sbjct: 188 HGRAICNARNPACGVCELADLCPS 211
>gi|302333063|gb|ADL23256.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 219
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIGVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|15605969|ref|NP_213346.1| endonuclease III [Aquifex aeolicus VF5]
gi|2983139|gb|AAC06742.1| endonuclease III [Aquifex aeolicus VF5]
Length = 232
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/226 (31%), Positives = 125/226 (55%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ +K + S ++ EI + +P+ EL Y N F L+V +L+AQ
Sbjct: 1 MAKRKGKGTRSESNRNLEELRRKAVEIVKRLEKVYLNPRLELEYENAFQLLVMAILAAQE 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
+D VNK +K F+ TPQ + ++L+ ++ I YR+K++ I LI +
Sbjct: 61 SDKVVNKVSKEFFKKYKTPQDIARANLEELEEDLKHINFYRRKAKLIKECCEKLIELYKG 120
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P+++ L +LPG+GRK AN+++ A+ +P I VD H+ R+ RI L+ K P+K+E
Sbjct: 121 EVPKSVGELVKLPGVGRKTANMVIGGAYNLPAIIVDRHVHRVVERISLSKQKNPDKMEME 180
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L I+P + L+ HG+ +CKAR P+C+ C I +LC+ ++
Sbjct: 181 LSEIVPQELWTKFSLLLLNHGKTICKARNPECEKCPILDLCEYGQK 226
>gi|257795492|ref|ZP_05644471.1| endonuclease III [Staphylococcus aureus A9781]
gi|258420592|ref|ZP_05683534.1| endonuclease III [Staphylococcus aureus A9719]
gi|257789464|gb|EEV27804.1| endonuclease III [Staphylococcus aureus A9781]
gi|257843540|gb|EEV67947.1| endonuclease III [Staphylococcus aureus A9719]
Length = 219
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TDV VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNRVTTELFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 KTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNARQVEDRLCSVIPRDRWNRSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLEDCREGQK 210
>gi|260891368|ref|ZP_05902631.1| endonuclease III [Leptotrichia hofstadii F0254]
gi|260858751|gb|EEX73251.1| endonuclease III [Leptotrichia hofstadii F0254]
Length = 219
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L++IF + K+ +PK L + + L+VAV+LSAQ TD VN TK LF++
Sbjct: 1 MTKKERLKKIFPILKEKFGNPKAALEFETPYQLMVAVILSAQCTDARVNIVTKELFKVVR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + + L+ YI++ G Y+ K++NI + +++ ++++ IP+ LE L LPG+GR
Sbjct: 61 KPEDIRKMDLGILEKYIKSTGFYKNKAKNIKLNAEMMLEKYNDVIPKDLEKLVELPGVGR 120
Query: 139 KGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L + I VDTH+ R+SNRIG P +E+ L++ +P + + ++
Sbjct: 121 KTANVVLGELWNIREGIVVDTHVKRLSNRIGFVKNDNPEIIERELMKFVPKRDWFVYSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
++LHGR C ARKP+C+ C I + CK
Sbjct: 181 MILHGRDKCIARKPKCEICEIRDYCKY 207
>gi|88706587|ref|ZP_01104290.1| Endonuclease III [Congregibacter litoralis KT71]
gi|88699083|gb|EAQ96199.1| Endonuclease III [Congregibacter litoralis KT71]
Length = 217
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 114/204 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I + +P L + + FTL++AVLLSAQ TD VN+ T LF A
Sbjct: 1 MLKAERAAYILHRLQELYPETPPPLDHSDPFTLLIAVLLSAQCTDERVNQVTPALFARAS 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ+M+ + +++ IR G+ +K++ I LS IL+ E + +P +E L RLPG+G
Sbjct: 61 TPQQMITLTVDEIREIIRPCGLSPQKAKAIAGLSRILLEEHEGLVPADMEALERLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V++S AFG+P VDTHI R++ R GL+ GK + E+ L ++ P ++ H +
Sbjct: 121 KTAGVVMSQAFGVPAFPVDTHIHRLAQRWGLSSGKNVTQTERDLKKLFPREYWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR + C I C
Sbjct: 181 IFYGREFCSARGCDGRVCEICRHC 204
>gi|225571496|ref|ZP_03780492.1| hypothetical protein CLOHYLEM_07594 [Clostridium hylemonae DSM
15053]
gi|225159573|gb|EEG72192.1| hypothetical protein CLOHYLEM_07594 [Clostridium hylemonae DSM
15053]
Length = 211
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K EI ++P L Y + + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKKKLALEIIERLKKEYPDAGCTLDYDHAWKLLVSVRLAAQCTDARVNVVVEDLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++++ +R G+ + K+ +I + IL +E+ +P + L +LPG+GR
Sbjct: 61 DVEALASAPPEEIEEIVRPCGLGKSKARDISACMKILRDEYGGNVPDDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ F P I DTH R+ NR+GL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFKKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP C C ++++CK+
Sbjct: 181 LVYHGRDVCTARTKPFCDKCCLADICKK 208
>gi|166363028|ref|YP_001655301.1| endonuclease III [Microcystis aeruginosa NIES-843]
gi|166085401|dbj|BAG00109.1| endonuclease III [Microcystis aeruginosa NIES-843]
Length = 218
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 1/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI +P L Y L+VAV+LSAQ TD VNK T LF + +
Sbjct: 12 RALEILSNLKRLYPEATCSLNYQTPVQLLVAVILSAQCTDERVNKVTPALFARFPDAKSL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++L+ IR+ G YR K++NI ++ +F ++P+T+ L LPG+ RK ANV
Sbjct: 72 AFAEREELETLIRSTGFYRNKAKNIQGACQKILKDFQGEVPKTMGELLTLPGVARKTANV 131
Query: 144 ILSMAFGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ A+GI DTH+ R+SNR+GL P K+E+ L+ ++P ++ HG
Sbjct: 132 VLAHAYGIIEGVTVDTHVKRLSNRLGLTTNNDPVKIERDLMALLPQPDWETFSISIIYHG 191
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
R VCKAR P C SC +++LC
Sbjct: 192 RAVCKARNPACFSCQLASLCPA 213
>gi|314922431|gb|EFS86262.1| endonuclease III [Propionibacterium acnes HL001PA1]
gi|314965652|gb|EFT09751.1| endonuclease III [Propionibacterium acnes HL082PA2]
gi|314982816|gb|EFT26908.1| endonuclease III [Propionibacterium acnes HL110PA3]
gi|315094220|gb|EFT66196.1| endonuclease III [Propionibacterium acnes HL060PA1]
gi|327329199|gb|EGE70959.1| endonuclease III [Propionibacterium acnes HL103PA1]
Length = 242
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 106/203 (52%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL YV + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 23 ANEVRVLLAEAYPDAHCELNYVGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 83 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVV 142
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 143 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 202
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 203 RCHSRRPACGVCPVAERCPSFGE 225
>gi|282853278|ref|ZP_06262615.1| endonuclease III [Propionibacterium acnes J139]
gi|282582731|gb|EFB88111.1| endonuclease III [Propionibacterium acnes J139]
Length = 275
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 106/203 (52%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL YV + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 56 ANEVRVLLAEAYPDAHCELNYVGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 115
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 116 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVTLPGVGRKTANVV 175
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 176 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 235
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 236 RCHSRRPACGVCPVAERCPSFGE 258
>gi|139438722|ref|ZP_01772206.1| Hypothetical protein COLAER_01208 [Collinsella aerofaciens ATCC
25986]
gi|133775802|gb|EBA39622.1| Hypothetical protein COLAER_01208 [Collinsella aerofaciens ATCC
25986]
Length = 221
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 69/210 (32%), Positives = 127/210 (60%), Gaps = 4/210 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ + ++ + L + N F L++AVLLSAQ+TD VNK T LF TP
Sbjct: 9 KRERAVEVCERLNRRYGPVECFLDHENPFRLLIAVLLSAQTTDAQVNKVTPKLFAQWPTP 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M + + I+++G Y+ K+++ + + +++ ++ ++P ++ L +LPG+GRK
Sbjct: 69 EAMAGASVADVADTIKSLGFYKSKAKHAVEAAQMIVADYGGEVPADMKELVKLPGVGRKT 128
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHY 196
AN++L++ +GI I VDTH+ RI++R+ L+P P K EQ LL+I+P ++ + ++
Sbjct: 129 ANIVLNVGYGIVEGIAVDTHVNRIAHRLMLSPKTHAKEPLKTEQDLLKILPHEYWESVNH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GR +C ARKP+C C +++LC ++
Sbjct: 189 QWITFGREICDARKPKCDECPLADLCPSVR 218
>gi|29347081|ref|NP_810584.1| endonuclease III [Bacteroides thetaiotaomicron VPI-5482]
gi|253571822|ref|ZP_04849227.1| endonuclease III [Bacteroides sp. 1_1_6]
gi|29338979|gb|AAO76778.1| endonuclease III [Bacteroides thetaiotaomicron VPI-5482]
gi|251838419|gb|EES66505.1| endonuclease III [Bacteroides sp. 1_1_6]
Length = 225
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L++
Sbjct: 1 MRKKERYEKVIAWFQANVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPPLYKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+N+F++K+P ++ L +LPG+GR
Sbjct: 61 TPEALAASTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSKVPDNMDDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP K AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKYF 209
>gi|254785170|ref|YP_003072598.1| endonuclease III [Teredinibacter turnerae T7901]
gi|237687259|gb|ACR14523.1| endonuclease III [Teredinibacter turnerae T7901]
Length = 217
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +P L + + +TL+VAVLLSAQ TD VNK T L+++AD
Sbjct: 1 MLKQQRVAYILAELEHLYPETPVPLDHKDPYTLLVAVLLSAQCTDERVNKITPLLWQLAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M +Q IR G+ +K++ I LS IL+NE+ ++PQ+L L LPG+G
Sbjct: 61 NCFDMAKQSVDAIQAIIRPCGLSPQKAKAIKGLSEILVNEYQGEVPQSLAQLEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG P VDTHI R++ R GL GK+ + E+ L R+ P + H +
Sbjct: 121 KTASVVVAQAFGEPAFPVDTHIHRLAQRWGLTNGKSVAQTERDLKRLFPRESWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR C I C
Sbjct: 181 IFYGREYCTARGCDGTVCPICTTC 204
>gi|237713685|ref|ZP_04544166.1| endonuclease III [Bacteroides sp. D1]
gi|262409409|ref|ZP_06085952.1| endonuclease III [Bacteroides sp. 2_1_22]
gi|294644946|ref|ZP_06722682.1| endonuclease III [Bacteroides ovatus SD CC 2a]
gi|294807476|ref|ZP_06766278.1| endonuclease III [Bacteroides xylanisolvens SD CC 1b]
gi|229446132|gb|EEO51923.1| endonuclease III [Bacteroides sp. D1]
gi|262352861|gb|EEZ01958.1| endonuclease III [Bacteroides sp. 2_1_22]
gi|292639759|gb|EFF58041.1| endonuclease III [Bacteroides ovatus SD CC 2a]
gi|294445316|gb|EFG13981.1| endonuclease III [Bacteroides xylanisolvens SD CC 1b]
Length = 225
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L++
Sbjct: 1 MRKKERYEKVIAWFQDNVPVAETELHYNNPYELLIAVILSAQCTDKRVNIITPPLYKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+N+F++++P LE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSQVPDNLEDLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP K AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKYF 209
>gi|240172235|ref|ZP_04750894.1| endonuclease III Nth [Mycobacterium kansasii ATCC 12478]
Length = 265
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + + + + +P EL + N L +A +LSAQSTD V
Sbjct: 22 AKRWSAETRTALVR---RARRMNRQLGQAFPHVYCELDFTNPLELALATILSAQSTDKRV 78
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
N T LF T +L+N IR G +R K+ +I L L+ FD ++P T
Sbjct: 79 NLTTPALFAKYRTALDYAKADRTELENLIRPTGFFRNKANALIGLGQALVERFDGEVPAT 138
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ L LPGIGRK ANVIL AFGIP I VDTH R+ R P KVE ++ +I
Sbjct: 139 MAELVTLPGIGRKTANVILGNAFGIPGITVDTHFGRLVRRWHWTAETDPVKVEHAVGELI 198
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + ++ HGR VC ARKP C C+++ C
Sbjct: 199 ERKEWTVLSHRVIFHGRRVCHARKPACGVCVLAKDCPSF 237
>gi|257389142|ref|YP_003178915.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
gi|257171449|gb|ACV49208.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
Length = 228
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EE+ ++P L Y + L+VAV+LSAQ TD VN+ T LFE +
Sbjct: 8 REAQAEEVIGRLHEEYPDSAISLNYASRLELLVAVVLSAQCTDERVNEVTADLFEKYQSA 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ E++L I I + K+ + + I++ E+D +P T+ GLT LPG+GRK
Sbjct: 68 RDYAEADEEQLAEDIYGITFHNNKAGYLTAAGQIMVEEYDGAVPDTMSGLTDLPGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ RI+ R+GL + P +E+ L+ I+P + L+
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRITRRLGLTDEERPEAIEEDLMPIVPESEWQQFTHLLI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VC AR P C C+++++C K
Sbjct: 188 DHGRAVCDARNPDCGDCVLADICPSQK 214
>gi|237723871|ref|ZP_04554352.1| endonuclease III [Bacteroides sp. D4]
gi|229437697|gb|EEO47774.1| endonuclease III [Bacteroides dorei 5_1_36/D4]
Length = 214
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ F P + EL+Y N F L++AV+LSAQ TD VN T L+
Sbjct: 1 MKKQELYNKVIAYFQETIPVAETELHYNNPFELLIAVILSAQCTDKRVNMITPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F +++P TLE L +LPG+GR
Sbjct: 61 TPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFHSEVPGTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLMKYIPKEIVPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRYVC AR P+C C ++ LC+
Sbjct: 181 WLILHGRYVCMARTPKCSECGLNGLCRY 208
>gi|189466733|ref|ZP_03015518.1| hypothetical protein BACINT_03109 [Bacteroides intestinalis DSM
17393]
gi|189434997|gb|EDV03982.1| hypothetical protein BACINT_03109 [Bacteroides intestinalis DSM
17393]
Length = 224
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+I F P + EL+Y F L++AV+LSAQ TD VN L+
Sbjct: 1 MRKKERYEKILAWFRENRPVAETELHYETPFQLLIAVILSAQCTDKRVNMIVPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F++++P TLE L +LPG+GR
Sbjct: 61 TPEVLAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFNSEVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDACTTPFSVEKELVKNIPEADIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDKCGLQLMCKYY 209
>gi|315091467|gb|EFT63443.1| endonuclease III [Propionibacterium acnes HL110PA4]
Length = 242
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 106/203 (52%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E+ L + +P EL YV + L+VA +LSAQ+TD VN T LF PQ +
Sbjct: 23 ANEVRVLLAEAYPDAHCELNYVGPYQLLVATVLSAQTTDRRVNTVTPTLFNRWPGPQALA 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ + +G ++ ++S+ L++ FD IP L+ L LPG+GRK ANV+
Sbjct: 83 DADIGEVETVVAPLGCGPTRAARLVSMGAKLVDNFDGAIPDDLDSLVPLPGVGRKTANVV 142
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AFGIP I DTH+ R+S R+G TP KVE L + P + L+ HGR
Sbjct: 143 LGNAFGIPGITPDTHVMRVSRRLGWTDATTPAKVETDLAELFDPSEWVMLCHRLIWHGRR 202
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C +R+P C C ++ C +
Sbjct: 203 RCHSRRPACGVCPVAERCPSFGE 225
>gi|331083986|ref|ZP_08333093.1| hypothetical protein HMPREF0992_02017 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402348|gb|EGG81918.1| hypothetical protein HMPREF0992_02017 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 211
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ E+ ++P L Y + + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKQEKALEVIERLRKEYPDAGCTLDYDDAWKLLVSVRLAAQCTDARVNVVVEDLYVKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ + K+ +I + IL E+ K+P + L +LPG+GR
Sbjct: 61 DVNALAEAPVEEVEKIVRPCGLGKSKARDICACMKILKEEYQGKVPDDFQALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVENIKEPKKVEMELWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR +C AR P C+SC ++++C++
Sbjct: 181 LVYHGREICTARTTPHCESCCLADICEK 208
>gi|298371974|ref|ZP_06981964.1| endonuclease III [Bacteroidetes oral taxon 274 str. F0058]
gi|298274878|gb|EFI16429.1| endonuclease III [Bacteroidetes oral taxon 274 str. F0058]
Length = 226
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 123/213 (57%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ L + I F + EL Y N F L+VAV+LSAQ TD VN T
Sbjct: 12 KRTMARLTLKQRYRHIIDWFVANKGIQQTELAYANDFQLLVAVILSAQCTDKRVNIVTPA 71
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LFE + M + + I++I KS ++ + LI +F ++P++++ +
Sbjct: 72 LFEKYPDAETMAEARYEDVLELIKSISYPNSKSRYLVDTARQLIEDFGGRVPESIDKMMM 131
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK ANVI S+ + P + VDTH+FR+S R+GL+ GKTP +VE L IP ++
Sbjct: 132 LPGVGRKTANVIASVLYKQPRMAVDTHVFRVSRRLGLSEGKTPLQVETDLTANIPKQYIA 191
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+AH+WL+LHGRYVC+AR+P C+ C I + C+ +
Sbjct: 192 DAHHWLILHGRYVCQARRPHCEECGIYDWCRYV 224
>gi|294792031|ref|ZP_06757179.1| endonuclease III [Veillonella sp. 6_1_27]
gi|294457261|gb|EFG25623.1| endonuclease III [Veillonella sp. 6_1_27]
Length = 211
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF
Sbjct: 1 MRVTKAIKAEQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KML IG KL+ I+ G+Y+ K++N+I+ IL++ + ++P+ + L LPG+G
Sbjct: 61 NHPAKMLEIGVAKLETLIKDCGLYKSKAKNLIATCQILVDRYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR+SNR+ L KTP ++EQ L + IP K AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMEQKLQKAIPKKDWAAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR VCKARKP C C +++LC +
Sbjct: 181 LIYHGRRVCKARKPLCNECFLNHLCPSAGK 210
>gi|288818057|ref|YP_003432405.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288787457|dbj|BAI69204.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308751658|gb|ADO45141.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
Length = 209
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 80/207 (38%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E+ +P+ K EL + N F L++AV+L+AQ+TD VN T+ LF+
Sbjct: 1 MQKEELVVEVIRRLEKVYPN-KLELNFKNPFELLIAVILAAQTTDAKVNHVTERLFKKYK 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQ I +I YR K++ I ++I ++ ++P+++E LTRLPG+GR
Sbjct: 60 TPEDYLRVPLEELQEDISSINYYRNKAKYIKGACKMIIEDYGGEVPKSIEELTRLPGVGR 119
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+IL AFGI I VDTH R+S R+GL + P+K+EQ L++I P +
Sbjct: 120 KTANMILYNAFGINEGIAVDTHTARVSKRLGLTEEEKPDKIEQELMQITPKEEWGKLSNL 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGRY+C A+ P+ + C++ +LC
Sbjct: 180 LILHGRYICTAKNPKHKECVLYDLCPS 206
>gi|300779992|ref|ZP_07089848.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
genitalium ATCC 33030]
gi|300534102|gb|EFK55161.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium
genitalium ATCC 33030]
Length = 275
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 2/196 (1%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N L++A +LSAQ+TDV VN T LF A ++
Sbjct: 48 LAATYPDAHAELDFTNPLELLIATVLSAQTTDVRVNSVTPELFRRYPDAASYAAANVDEI 107
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
IR G +R K+ ++ + L+++ +P +E L +LPG+GRK A+V+ AFG+
Sbjct: 108 AEIIRPTGFFRAKAGHLKGIGEALVDKHGGDVPTAIEDLVKLPGVGRKTAHVVRGNAFGM 167
Query: 152 PTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
P + VDTH R+ +R+ L P +E ++ +I + + ++ HGR VC AR
Sbjct: 168 PGLTVDTHFQRLVHRMMLIDASITDPVAIEHAIASVIEKREWTMFSHRIIFHGRRVCHAR 227
Query: 210 KPQCQSCIISNLCKRI 225
KP C +C ++ C
Sbjct: 228 KPACGACPVAFDCPSF 243
>gi|170749886|ref|YP_001756146.1| endonuclease III [Methylobacterium radiotolerans JCM 2831]
gi|170656408|gb|ACB25463.1| endonuclease III [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 110/203 (54%), Positives = 153/203 (75%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P L EIF F P PKGEL+YVN FTL+VAV+LSAQ+TD VN AT LF +ADTP+
Sbjct: 79 PATLAEIFRRFQAAEPEPKGELHYVNPFTLLVAVVLSAQATDRGVNLATGPLFAVADTPE 138
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
KMLA+GE ++++++RTIG++ K++N+++LS IL++E +P +LE L LPG+G K A
Sbjct: 139 KMLALGEDRVRDFVRTIGLFNTKAKNVVALSRILVDEHGGTVPASLEALQVLPGVGAKTA 198
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+V+L++AFG+P I VDTHIFR+SNRI L G T +KV+ L I+P ++ +AH+WL+LH
Sbjct: 199 SVVLNIAFGVPRIAVDTHIFRVSNRIPLFVGATTDKVQAGLEAIVPDSYRLHAHHWLILH 258
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GRY CKARKP+C C I++LC+
Sbjct: 259 GRYTCKARKPECPRCHIADLCRY 281
>gi|268609098|ref|ZP_06142825.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Ruminococcus flavefaciens FD-1]
Length = 210
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEI-FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
KE+ E+ +P L Y + L+ A L+AQ TD VN TK LF
Sbjct: 1 MKKKEIAELAVAELKKLYPDASCTLDYDEPYQLMFAARLAAQCTDARVNIVTKTLFRKYL 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q +L+ ++ G Y K++++ ++ LIN+F ++P T+E L L GIGR
Sbjct: 61 TLQAFADADLAELEQDVKPCGFYHTKAKSLKEMAGQLINDFGGEVPDTMEELLTLSGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++L FG P + DTH RI+ R+GL K P KVE+ L+++IPP+ + +
Sbjct: 121 KTANLMLGDVFGKPAMVTDTHCIRITGRLGLTANKEPAKVEKDLVKLIPPEESSDFCHRT 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V GR +CKAR P+C C ++ C +
Sbjct: 181 VEFGRDICKARSPKCTECPLNYFCNYYSK 209
>gi|224540505|ref|ZP_03681044.1| hypothetical protein BACCELL_05419 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517886|gb|EEF86991.1| hypothetical protein BACCELL_05419 [Bacteroides cellulosilyticus
DSM 14838]
Length = 224
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y F L++AV+LSAQ TD VN L+
Sbjct: 1 MRKKERYEKVLAWFRENRPVAETELHYETPFQLLIAVILSAQCTDKRVNMIVPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F++++P TLE L +LPG+GR
Sbjct: 61 TPEVLAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFNSEVPGTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL + P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDQCTTPFSVEKELVKNIPEADIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR PQC +C + +CK
Sbjct: 181 WLILHGRYVCQARTPQCDNCGLQLMCKYY 209
>gi|189347472|ref|YP_001944001.1| endonuclease III [Chlorobium limicola DSM 245]
gi|189341619|gb|ACD91022.1| endonuclease III [Chlorobium limicola DSM 245]
Length = 212
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 128/206 (62%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++ I +P PK EL Y + F L++A +L+AQ+TD VN TK LF++
Sbjct: 6 EEKIGFIRTALGRIYPEPKSELIYDSPFQLLIATILAAQATDKQVNILTKKLFDVCPDAT 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M + +++ +R+I K++NI+++S L+ E++ ++P + E L LPG+GRK A
Sbjct: 66 TMSMTDPETIRDLVRSINYCNNKAKNILAVSKKLVEEYEGEVPASREALESLPGVGRKTA 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AF P + VDTH+ R+SNRIGL P E L+++IP + H++L+LH
Sbjct: 126 NVVLSNAFRQPVMPVDTHVHRVSNRIGLVKTSKPENTETELIKVIPEAWVIDFHHYLLLH 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY CKA+KP+CQ C++ ++C ++
Sbjct: 186 GRYTCKAKKPECQGCVLRDICDWPEK 211
>gi|260587725|ref|ZP_05853638.1| endonuclease III [Blautia hansenii DSM 20583]
gi|260541990|gb|EEX22559.1| endonuclease III [Blautia hansenii DSM 20583]
Length = 211
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ E+ ++P L Y + + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKQEKALEVIERLRKEYPDAGCTLDYDDAWKLLVSVRLAAQCTDARVNVVVEDLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ + K+ +I + IL E+ K+P + L +LPG+GR
Sbjct: 61 DVNALAEAPVEEVEKIVRPCGLGKSKARDICACMKILKEEYQGKVPDDFQALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVENIKEPKKVEMELWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR +C AR P C+SC ++++C++
Sbjct: 181 LVYHGREICTARTTPHCESCCLADICEK 208
>gi|116070744|ref|ZP_01468013.1| Endonuclease III/Nth [Synechococcus sp. BL107]
gi|116066149|gb|EAU71906.1| Endonuclease III/Nth [Synechococcus sp. BL107]
Length = 217
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + +P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRKAERAQLVLERLNQHYPETPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M ++ E ++ ++IR +G+ + K++++ LS +LI+E +P + + L LPG+G
Sbjct: 61 TPQAMASLDETEILSFIRQLGLAKTKAKHVRRLSELLISEHAGAVPNSFKALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL G + EQ L R+ P H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLTNGSSVATTEQDLKRLFPKSQWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGREYCSARGCNGTICPLCK 202
>gi|222151347|ref|YP_002560503.1| endonuclease III homolog [Macrococcus caseolyticus JCSC5402]
gi|222120472|dbj|BAH17807.1| endonuclease III homolog [Macrococcus caseolyticus JCSC5402]
Length = 217
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + +P + EL + N F L +AVLLSAQ TDV VNK T+ LF+
Sbjct: 1 MISKKKTLEMLDIIDEMFPDAECELVHDNPFELTIAVLLSAQCTDVLVNKVTQSLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++L + IR+IG+Y+ K++NI +L ILI+ +D ++PQ+ L LPG+G+
Sbjct: 61 TPEDYLAVSIEELMDDIRSIGLYKNKAKNIQALCRILIDRYDGQVPQSHSALVELPGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP + VDTH+ R+S R+G+ +VE++L IP + H+
Sbjct: 121 KTANVVVSVAFGIPALAVDTHVERVSKRLGICRWKDNVKQVEETLTERIPMERWNKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C AR P+C C + +C+ ++
Sbjct: 181 LIFFGRYHCTARNPKCLECPLLQMCREGRK 210
>gi|297617011|ref|YP_003702170.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
gi|297144848|gb|ADI01605.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
Length = 225
Score = 138 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 122/206 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + + +P L + N F L+VAV+LSA++TD VN+ T+ LF
Sbjct: 1 MAKTDKILLVLRTLADVYPQAGTRLKFQNPFQLLVAVMLSARTTDEQVNRVTRGLFAEVK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ + ++ L++ I+ G+YR+K+ N+I+L+ IL+ EF ++P + L RLPG+GR
Sbjct: 61 SPKDLASMEVGILEDMIKGCGLYRQKARNLIALARILMEEFGGEVPTDFDQLLRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV++S+ F P +GVDTH+ R+S R+G + P E L RIIP AH+
Sbjct: 121 KTANVVVSVGFAKPGLGVDTHVLRVSRRLGWHNARDPQVAEAELKRIIPESWWARAHHLF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR VC+ARKP C C I C+
Sbjct: 181 ISHGRAVCRARKPDCDRCTIRLYCQY 206
>gi|225870747|ref|YP_002746694.1| endonuclease III [Streptococcus equi subsp. equi 4047]
gi|225700151|emb|CAW94289.1| putative endonuclease III [Streptococcus equi subsp. equi 4047]
Length = 220
Score = 138 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L+++ + +P KGEL + F L++ V+LSAQ+TD VNK T L++
Sbjct: 5 RERLKKVLSIIGEMFPEAKGELNWDQEKPFQLLITVILSAQTTDKAVNKVTPKLWQSYPE 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ +++++RTIG+Y+ K++NII + L+ +FD ++P+T + L LPG+GRK
Sbjct: 65 LSDLAQANVSDVEDHLRTIGLYKNKAKNIIKTAQQLLTQFDGQVPKTHKELESLPGVGRK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+L+ +G+P I VDTH+ RI+ R+ + AP ++E L+ +P K H+ L
Sbjct: 125 TANVVLAEIYGVPAIAVDTHVSRIAKRLNISAPDADVTEIEADLMAKLPKKDWIITHHRL 184
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GRY C A+ P+C +C + + C K
Sbjct: 185 IFFGRYHCLAKHPKCDTCPVQSYCSYYK 212
>gi|160886403|ref|ZP_02067406.1| hypothetical protein BACOVA_04414 [Bacteroides ovatus ATCC 8483]
gi|237723268|ref|ZP_04553749.1| endonuclease III [Bacteroides sp. 2_2_4]
gi|260173467|ref|ZP_05759879.1| endonuclease III [Bacteroides sp. D2]
gi|293372757|ref|ZP_06619138.1| endonuclease III [Bacteroides ovatus SD CMC 3f]
gi|298482932|ref|ZP_07001114.1| endonuclease III [Bacteroides sp. D22]
gi|299146883|ref|ZP_07039951.1| endonuclease III [Bacteroides sp. 3_1_23]
gi|315921737|ref|ZP_07917977.1| endonuclease III [Bacteroides sp. D2]
gi|156108288|gb|EDO10033.1| hypothetical protein BACOVA_04414 [Bacteroides ovatus ATCC 8483]
gi|229447790|gb|EEO53581.1| endonuclease III [Bacteroides sp. 2_2_4]
gi|292632266|gb|EFF50863.1| endonuclease III [Bacteroides ovatus SD CMC 3f]
gi|298270904|gb|EFI12483.1| endonuclease III [Bacteroides sp. D22]
gi|298517374|gb|EFI41255.1| endonuclease III [Bacteroides sp. 3_1_23]
gi|313695612|gb|EFS32447.1| endonuclease III [Bacteroides sp. D2]
Length = 225
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E++ F P + EL+Y N + L++AV+LSAQ TD VN T L++
Sbjct: 1 MRKKERYEKVIAWFQDNIPVAETELHYNNPYELLIAVILSAQCTDKRVNIITPPLYKDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+N+F++++P LE L +LPG+GR
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSEVPDNLEDLIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++ IP K AH+
Sbjct: 121 KTANVIQSVVFKKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKYF 209
>gi|317128625|ref|YP_004094907.1| endonuclease III [Bacillus cellulosilyticus DSM 2522]
gi|315473573|gb|ADU30176.1| endonuclease III [Bacillus cellulosilyticus DSM 2522]
Length = 221
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ IF +P + EL + N F L +AVLLSAQ TD VNK T LFE
Sbjct: 1 MLTRKDIINIFNTIGDMFPDAECELTHANPFELTIAVLLSAQCTDALVNKVTPKLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + +L+N IR+IG++R K++NI L LI +++ +IP+ L +L G+GR
Sbjct: 61 TPDDYIQAPLDELENDIRSIGLFRSKAKNIKKLCQSLIEDYNGEIPKEKSELVKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AF P I VDTH+ R+S R+G+ + +VE++L++ +P + +H+
Sbjct: 121 KTANVVASVAFNEPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKLPKEEWSVSHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + +LC+ K+
Sbjct: 181 LIFFGRYHCKAQSPRCNECPLLSLCREGKK 210
>gi|99082291|ref|YP_614445.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Ruegeria sp. TM1040]
gi|99038571|gb|ABF65183.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Ruegeria sp. TM1040]
Length = 247
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 149/220 (67%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
+P+ L EIF F PKGEL +VN +TL+VAV LSAQ+TD VN
Sbjct: 26 PQRAKEAPMAKQLDYHTLREIFTRFQDAEAEPKGELDHVNVYTLVVAVALSAQATDAGVN 85
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
KATK LF+IADTPQKML +GE+ + +I+TIG+YR K++N+I LS IL++E+ ++P +
Sbjct: 86 KATKDLFKIADTPQKMLDLGEEGVIEHIKTIGLYRNKAKNVIKLSRILVDEYGGEVPCSR 145
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
L LPG+GRK ANV+L+M + P VDTHIFR+ NR G+ PGK N VE+++ IP
Sbjct: 146 ASLESLPGVGRKTANVVLNMWWRYPAQAVDTHIFRVGNRSGICPGKDVNAVERAIEDNIP 205
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
Q +AH+WL+LHGRY CKARKP C +CII +LC ++
Sbjct: 206 VDFQLHAHHWLILHGRYHCKARKPLCATCIIRDLCLYEEK 245
>gi|218130325|ref|ZP_03459129.1| hypothetical protein BACEGG_01913 [Bacteroides eggerthii DSM 20697]
gi|317473830|ref|ZP_07933111.1| endonuclease III [Bacteroides eggerthii 1_2_48FAA]
gi|217987504|gb|EEC53833.1| hypothetical protein BACEGG_01913 [Bacteroides eggerthii DSM 20697]
gi|316910087|gb|EFV31760.1| endonuclease III [Bacteroides eggerthii 1_2_48FAA]
Length = 224
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+I F P + EL+Y N F L++AV+LSAQ TD VN T L+
Sbjct: 1 MRKKERYEKILAWFRANRPIAETELHYDNPFELLIAVILSAQCTDKRVNMITPALYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F++++P TLE L +LPG+GR
Sbjct: 61 TPEALAATTPEVVYEYIRSVSYPNNKAKHLVGMAKMLVKDFNSQVPDTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+R+GL K P VE+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRLGLVSDKCTTPFSVEKELVKHIPEAEIPIAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRY+C+AR PQC +C + +CK
Sbjct: 181 WLILHGRYICQARTPQCDNCGLQLMCKYY 209
>gi|148652689|ref|YP_001279782.1| endonuclease III [Psychrobacter sp. PRwf-1]
gi|148571773|gb|ABQ93832.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Psychrobacter sp. PRwf-1]
Length = 231
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 139/213 (65%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
++P +++ F + P EL Y ++F L++AV+LSAQ+TDV+VN A
Sbjct: 8 KTADTPPSRRLPNRDVRPFFEKLAAAIDEPVTELEYSSNFELLIAVILSAQATDVSVNIA 67
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T+ LF +A+TP+ + A+GE+ L+ YI+TIG+Y K++N+I L+++ ++ +P +
Sbjct: 68 TRKLFAVANTPEAIYALGEEGLKQYIKTIGLYNSKAKNVIKACKDLVDKHNSVVPDNRKD 127
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L L G+GRK ANV+L+ AFG PT+ VDTHIFR+SNR GLA GKT VE L+ +P
Sbjct: 128 LEALAGVGRKTANVVLNTAFGQPTMAVDTHIFRVSNRTGLATGKTVLAVEHKLIERVPDD 187
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+AH++L+LHGRY C+AR P+C +C + C
Sbjct: 188 FILDAHHYLILHGRYTCQARTPKCGACPVYTEC 220
>gi|295398565|ref|ZP_06808597.1| endonuclease III [Aerococcus viridans ATCC 11563]
gi|294973166|gb|EFG48961.1| endonuclease III [Aerococcus viridans ATCC 11563]
Length = 223
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 1/207 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L T E I +P+PK L Y F L++AVL+SAQ+TDV VNK T +LF
Sbjct: 12 PLKTKAETIAILDELDKLYPNPKTMLDYQTPFQLVIAVLMSAQTTDVAVNKVTPNLFAKY 71
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P M + L++YI+TIG+Y K++N+ + ++ +EF+ ++P+T E L +LPG+G
Sbjct: 72 PDPDHMAEAELEDLESYIKTIGLYHNKAKNMKKTAIMIRDEFNGQVPKTREELIQLPGVG 131
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
RK ANV+LS AFGIPTI VDTH+ R++ R+G+ + + E++L+ IP +AH+
Sbjct: 132 RKTANVVLSEAFGIPTIAVDTHVERVTKRMGIVDPDASVRQTEETLMAKIPQDRWRDAHH 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
+ GR C AR P+C S C+
Sbjct: 192 QFIYFGREYCTARNPKCVSDPRITFCE 218
>gi|265751141|ref|ZP_06087204.1| endonuclease III [Bacteroides sp. 3_1_33FAA]
gi|263238037|gb|EEZ23487.1| endonuclease III [Bacteroides sp. 3_1_33FAA]
Length = 214
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ F P + EL+Y N F L++AV+LSAQ TD VN T L+
Sbjct: 1 MKKQELYNKVIAYFQKTIPVAETELHYNNPFELLIAVILSAQCTDKRVNMITPPLYRDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A + + YIR++ K+++++ ++ +L+ +F +++P TLE L +LPG+GR
Sbjct: 61 TPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFHSEVPGTLEELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP + AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLMKYIPKEIVPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRYVC AR P+C C ++ LC+
Sbjct: 181 WLILHGRYVCMARTPKCSECGLNGLCRY 208
>gi|224372669|ref|YP_002607041.1| endonuclease III [Nautilia profundicola AmH]
gi|223589721|gb|ACM93457.1| endonuclease III [Nautilia profundicola AmH]
Length = 214
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L TP+ELEEI F + + EL Y N + L++A++LSAQ TD VN T LF+
Sbjct: 2 VLRTPEELEEIKRRFLEHYKGSQTELNYKNDYELLIAIILSAQCTDKRVNIITPELFKKY 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + ++N I++ + K++NII ++ I+ ++F+ KIP + L +LPG+G
Sbjct: 62 PDIKSLACANIDDVKNIIKSCSFFNNKAKNIIEMAKIVRDKFNCKIPHDHKELIKLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV L G + VDTH+FR+ +R+G+ KT + E+ L+ H
Sbjct: 122 NKTANVFLIELNGENRMAVDTHVFRVVHRLGITDAKTVEQTEKDLVEAF-KTDLNELHQG 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC---KRIK 226
VL GRY+C A+ P+C+ C + + C + K
Sbjct: 181 FVLFGRYICTAKNPKCEKCFVPDFCVTKESFK 212
>gi|149913205|ref|ZP_01901739.1| endonuclease III [Roseobacter sp. AzwK-3b]
gi|149813611|gb|EDM73437.1| endonuclease III [Roseobacter sp. AzwK-3b]
Length = 231
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 110/219 (50%), Positives = 149/219 (68%), Gaps = 3/219 (1%)
Query: 9 SYQGNSPLGCLYTPKE---LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
+ P + + + EIF F P PKGEL +VN +TL+VAV LSAQ+TDV
Sbjct: 8 ALSAIMPFKAMARQLDYHTIREIFTRFQAADPEPKGELEHVNAYTLVVAVALSAQATDVG 67
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN+AT+ LF+IADTPQKML +GE L ++I+TIG+YR K++N+I LS IL+ E+ ++P
Sbjct: 68 VNRATRELFKIADTPQKMLDLGEAGLIDHIKTIGLYRNKAKNVIKLSKILVEEYGGEVPN 127
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
+ L LPG+GRK ANV+L+M + P VDTHIFR+ NR G+ PGK VE+++
Sbjct: 128 SRAALQALPGVGRKTANVVLNMWWHYPAQAVDTHIFRVGNRSGICPGKDVVAVERAIEDN 187
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
IP Q +AH+WL+LHGRY CKARKP C +CII +LC+
Sbjct: 188 IPVDFQQHAHHWLILHGRYHCKARKPMCPTCIIRDLCQF 226
>gi|77917627|ref|YP_355442.1| endonuclease III [Pelobacter carbinolicus DSM 2380]
gi|77543710|gb|ABA87272.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Pelobacter carbinolicus DSM 2380]
Length = 216
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 119/203 (58%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E++E+ + +P L + N + L+VA +LSAQ TD VN T+ LF Q
Sbjct: 8 AEMQEVIRILEQLYPEAHCALNFENPWQLLVATILSAQCTDRQVNIVTRELFARFTDAQS 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +++ IR+ G +R K++N+I + +++ ++PQT+E L LPG+GRK AN
Sbjct: 68 LATARPETIEDIIRSTGFFRNKAKNLIGCAAAVVDRHGGQVPQTIEDLVALPGVGRKTAN 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AF IP + VDTH+ R+ R+G + + P ++E+ L +++PP + L+ HG
Sbjct: 128 VVLGNAFDIPGLPVDTHVKRLVRRLGWSQERDPVRIERELCQLLPPPSWTQTSHLLIHHG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R +CKA++P C C + +C RI
Sbjct: 188 RSLCKAQRPLCSRCPVQPVCPRI 210
>gi|330685004|gb|EGG96679.1| endonuclease III [Staphylococcus epidermidis VCU121]
Length = 219
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD+ VNK TK LF
Sbjct: 1 MISKKKALEMIDVIADMFPDAECELRHDNAFELTIAVLLSAQCTDILVNKVTKSLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQ+ I++IG+YR K++NI L L+++FD +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQSDIKSIGLYRNKAKNIKKLCQSLLDKFDGEIPQTHQELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP + +H+
Sbjct: 121 KTANVVMSVAFNEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPKERWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + N C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLFNDCREGQK 210
>gi|206900947|ref|YP_002250401.1| endonuclease III [Dictyoglomus thermophilum H-6-12]
gi|206740050|gb|ACI19108.1| endonuclease III [Dictyoglomus thermophilum H-6-12]
Length = 210
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 78/207 (37%), Positives = 127/207 (61%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E+ + PK L + N + L+VA +LSAQ+TD VN T+ LF+
Sbjct: 1 MDKKEFVIEVLKRLRTLY-EPKIALNFSNPWELLVATILSAQTTDERVNMVTEKLFKKYK 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++L+ I++I YR K++NI + + I++ ++ K+P T+E L +LPG+ R
Sbjct: 60 TPEDYLKVPLEELEQDIKSINYYRTKAKNIRACAQIILEKYGGKVPDTMEELLKLPGVAR 119
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS +G I VDTH+ R+S R L+ K +K+EQ L++I+P + N Y
Sbjct: 120 KTANVVLSAGYGKNEGIVVDTHVDRLSKRFNLSKEKNRDKLEQDLMKIVPREEWANFSYL 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR VCKA+ P+C CI++++C
Sbjct: 180 LIHHGRNVCKAKNPKCDECILNDICPS 206
>gi|126658588|ref|ZP_01729735.1| endonuclease III [Cyanothece sp. CCY0110]
gi|126620175|gb|EAZ90897.1| endonuclease III [Cyanothece sp. CCY0110]
Length = 212
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 116/206 (56%), Gaps = 2/206 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+ EI + +P L Y + L++A +LSAQ TD VNK T LF +
Sbjct: 7 EKKALEILKILKQLYPDATCSLTYDSPVQLLIATILSAQCTDERVNKVTPELFARFPDAE 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + L+ IR+ G YR K++NI +I +F+ K+P+T+E L LPG+ RK A
Sbjct: 67 SLANADREVLETLIRSTGFYRNKAKNIQGACQKIIEDFNGKVPRTMEELLLLPGVARKTA 126
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ AFGI + VDTH+ R+S R+GL P K+E+ L+ ++P + N ++
Sbjct: 127 NVVLAHAFGINAGVTVDTHVKRLSQRLGLTKATDPVKIEKDLMGLLPQEDWENFSIRIIY 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
HGR +CKAR P CQ C ++ LC K
Sbjct: 187 HGRQICKARTPNCQECKLAYLC-SFK 211
>gi|291514861|emb|CBK64071.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Alistipes shahii WAL 8301]
Length = 220
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + + + FS P + EL+Y + + L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MTTKQRYDGVIAWFSEHMPVAESELHYSDPYQLLVAVILSAQCTDKRVNMTTPALFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M +++ YIR+I K+ N+ ++ +L EF ++P LE + RLPG+GR
Sbjct: 61 TPYHMARATAEEIYPYIRSISYPNNKARNLAGMARMLCEEFGGEVPSDLEQMQRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ ++ + + VDTH+FR+S RIGL KTP + E +L + IP AH+W
Sbjct: 121 KTANVLGAVLWQKEVMPVDTHVFRVSERIGLTTRSKTPLQTELTLEKNIPGHLLPLAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+LHGRYVC AR P+C C I+ C++
Sbjct: 181 LILHGRYVCVARAPKCDECGIATWCRKY 208
>gi|238763083|ref|ZP_04624049.1| Endonuclease III [Yersinia kristensenii ATCC 33638]
gi|238698582|gb|EEP91333.1| Endonuclease III [Yersinia kristensenii ATCC 33638]
Length = 204
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 138/197 (70%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+TPQ +L +G +
Sbjct: 3 RLRDNDPHPTTELVYSTPFELLISVLLSAQATDVSVNKATAKLYPVANTPQAILDLGVEG 62
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L++YI+TIG++ K+EN+I IL+ + ++P+ L LPG+GRK ANV+L+ AFG
Sbjct: 63 LKSYIKTIGLFNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRKTANVVLNTAFG 122
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
PTI VDTHIFR+ NR G APG ++VE LL+++P + + + H+WL+LHGRY C ARK
Sbjct: 123 WPTIAVDTHIFRVCNRTGFAPGSNVDQVETKLLKVVPAEFKLDCHHWLILHGRYTCVARK 182
Query: 211 PQCQSCIISNLCKRIKQ 227
P+C SCII +LC+ ++
Sbjct: 183 PRCGSCIIEDLCEFKEK 199
>gi|312793645|ref|YP_004026568.1| endonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180785|gb|ADQ40955.1| endonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 211
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 121/208 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P P L Y + L++A +L+AQSTD VNK T LF+
Sbjct: 1 MTKKEKASYVIKELLKIYPQPSCTLNYNKPYELLIATILAAQSTDERVNKITAELFKKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +L+N I+ +G Y+ K+++I + IL+ +++ +P T+E L +L G+GR
Sbjct: 61 TLESFAEANISELENDIKPVGFYKNKAKSIKETARILVEKYNGTLPTTIEELVKLKGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI++ +GIP+I VDTH R+SNR+GL K K+E L +I+ P+ +
Sbjct: 121 KTANVIMANIYGIPSIIVDTHCKRLSNRLGLVNSKDATKIEFELKKIVEPQLYTIFSNLM 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V HGR VCKA KP+C+ C I ++C+ K
Sbjct: 181 VYHGRAVCKAIKPKCEVCTIKDVCEYFK 208
>gi|160915277|ref|ZP_02077490.1| hypothetical protein EUBDOL_01286 [Eubacterium dolichum DSM 3991]
gi|158433076|gb|EDP11365.1| hypothetical protein EUBDOL_01286 [Eubacterium dolichum DSM 3991]
Length = 215
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EI + +P EL + N F L+VAV+LSAQ+TD VNK T LF TP+ M
Sbjct: 4 DEILDILEAMFPDAHCELIHKNPFELLVAVVLSAQTTDEAVNKVTPGLFAKFPTPEAMAN 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ I+ IG+YR K++++ +LS L+ F +++P + LT L G+GRK ANV+
Sbjct: 64 ASLEDIEACIKRIGLYRNKAKSVQALSKALVERFHSEVPHAHKDLTSLAGVGRKTANVVQ 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+ F IP I VDTH+ RIS R+GLA VE+ L R I + AH+ + GRY
Sbjct: 124 SVCFDIPAIAVDTHVERISKRLGLAKVYDNVETVEKKLKRKIRKERWNKAHHLFIFFGRY 183
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
C A+ P C+ C ++CK+ K
Sbjct: 184 YCTAKNPHCEGCPFVSICKKDK 205
>gi|283797428|ref|ZP_06346581.1| endonuclease III [Clostridium sp. M62/1]
gi|291074786|gb|EFE12150.1| endonuclease III [Clostridium sp. M62/1]
Length = 211
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 114/206 (55%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI ++P L Y + + L+V+V L+AQ TD VN K L+E
Sbjct: 1 MTKEELTLEIIDRLKKEYPDADCTLDYNDAWKLLVSVRLAAQCTDARVNVVVKDLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ K+++I + +L ++FD ++P + + L LPG+GR
Sbjct: 61 DVNALAEAPVEEIEAIVRPCGLGHSKAKDISACMKMLRDQFDGRVPDSFDALLSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL G P KVE +L +++PP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKLVPPQEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR +C AR KP C C ++++C
Sbjct: 181 LVYHGRDICTARTKPHCDRCCLADIC 206
>gi|114566493|ref|YP_753647.1| endonuclease III [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337428|gb|ABI68276.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 207
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EI ++P L + + F +VAV+LSAQSTD VN+ T LF TP+ + AI
Sbjct: 6 EIIKCLKKEYPEAGTLLQHSSPFQFMVAVVLSAQSTDEQVNRVTAELFADYGTPEALAAI 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
L+ IR +G+YR K+ ++ ++ I++ ++ ++P + L LPG+GRK ANVI S
Sbjct: 66 DLSLLEEKIRGVGLYRNKARHLKKMAQIIVEQYQGEVPSDFDELLSLPGVGRKSANVIRS 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+ F P +GVDTH+ R++NR+GL K P + E++L IP K AH+ L+ HGR +C
Sbjct: 126 VVFKKPGLGVDTHVHRVANRLGLVNSKLPEQTEKALKEQIPEKCWSEAHHLLIFHGRRIC 185
Query: 207 KARKPQCQSCIISNLC-KRIKQ 227
+ARKPQC +C++ LC KR ++
Sbjct: 186 QARKPQCNNCVLEGLCEKRFEK 207
>gi|118464775|ref|YP_879737.1| endonuclease III [Mycobacterium avium 104]
gi|118166062|gb|ABK66959.1| endonuclease III [Mycobacterium avium 104]
Length = 232
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 104/203 (51%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + + +P EL + L VA +LSAQSTD VN T+ LF+
Sbjct: 2 RRARRMNRILAQAFPEAHCELDFTTPLELTVATILSAQSTDKRVNLTTRALFKRYTCALD 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+L+N IR G +R K+ +I L L+ FD ++P T+ L LPG+GRK AN
Sbjct: 62 YAQADRDELENLIRPTGFFRNKASALIRLGQALVERFDGEVPATMAELVTLPGVGRKTAN 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
VIL AFG+P I VDTH R+ +R K P K+E ++ +I + ++ HG
Sbjct: 122 VILGNAFGVPGITVDTHFARLVHRWRWTAEKDPVKIEHAVGELIERSEWTMLSHRVIFHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
R VC +RKP C C+++ C
Sbjct: 182 RRVCHSRKPACGVCLLARDCPSF 204
>gi|153815003|ref|ZP_01967671.1| hypothetical protein RUMTOR_01218 [Ruminococcus torques ATCC 27756]
gi|317501555|ref|ZP_07959751.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088583|ref|ZP_08337494.1| endonuclease III [Lachnospiraceae bacterium 3_1_46FAA]
gi|145847571|gb|EDK24489.1| hypothetical protein RUMTOR_01218 [Ruminococcus torques ATCC 27756]
gi|316897066|gb|EFV19141.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407540|gb|EGG87040.1| endonuclease III [Lachnospiraceae bacterium 3_1_46FAA]
Length = 207
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 1/202 (0%)
Query: 22 PKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K EEI L ++ L Y + L++A +LSAQ TD VN TK LF+ +
Sbjct: 2 KKRTEEILNLLDEQYGREYICYLNYETPWQLLIATMLSAQCTDARVNIVTKDLFQKYTSV 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
K+L+ I+ G YR K++NII+ + +F ++P++LE LT L G+GRK
Sbjct: 62 DAFADADLKELEQDIKPTGFYRNKAKNIIACMKDIREKFGGEVPRSLEDLTSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + ++ VDTH+ RISNR+G P K+EQ L++ +P H + ++
Sbjct: 122 ANVIRGNIYHDASVVVDTHVKRISNRLGFTKQSDPEKIEQDLMKELPKDHWILYNIQIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
GR +C AR P+C C + C
Sbjct: 182 FGRSICTARNPKCGECFLKKYC 203
>gi|194335653|ref|YP_002017447.1| endonuclease III [Pelodictyon phaeoclathratiforme BU-1]
gi|194308130|gb|ACF42830.1| endonuclease III [Pelodictyon phaeoclathratiforme BU-1]
Length = 212
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 125/203 (61%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++ + L +P+PK EL Y + F L++A +++AQ+TD VN T+ LF A +
Sbjct: 6 EEKIVFLNELLGAAYPNPKSELNYESPFQLLIATIMAAQATDRQVNVITRELFRCAPDAE 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M + ++++ +R+I K++NI+++S IL+ + +P T EGL LPG+GRK A
Sbjct: 66 TMSRMELDEVRSLVRSINYCNNKAKNILAVSRILVERWQGVVPGTREGLESLPGVGRKTA 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS AF P + VDTH+ R+SNRIGL + P + E L+ IIP H++L+LH
Sbjct: 126 NVVLSNAFDQPVMPVDTHVHRVSNRIGLVHTEKPEETEAGLMTIIPEAWVIPFHHYLLLH 185
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GRY CKA+KP C C +S +C
Sbjct: 186 GRYTCKAKKPDCAHCTVSGICDY 208
>gi|295090057|emb|CBK76164.1| Predicted EndoIII-related endonuclease [Clostridium cf.
saccharolyticum K10]
Length = 211
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI ++P L Y + + L+V+V L+AQ TD VN K L+E
Sbjct: 1 MTKEELTLEIIDRLKKEYPDADCTLDYNDAWKLLVSVRLAAQCTDARVNVVVKDLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ K+++I +L ++FD ++P + + L LPG+GR
Sbjct: 61 DVNALAEAPVEEIEAIVRPCGLGHSKAKDISDCMKMLRDQFDGRVPDSFDALLSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL G P KVE +L +++PP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKLVPPQEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR +C AR KP C C ++++C
Sbjct: 181 LVYHGRDICTARTKPHCDRCCLADIC 206
>gi|113476793|ref|YP_722854.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Trichodesmium erythraeum IMS101]
gi|110167841|gb|ABG52381.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Trichodesmium erythraeum IMS101]
Length = 217
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + E+ +P L Y L+VA +LSAQ TD VNK T L
Sbjct: 3 TTRKHSLKRQRSLELLIRLKDLYPDATCTLTYKTPVQLLVATILSAQCTDERVNKVTPAL 62
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F+ + ++L+N +R+ G YR K++NI S ++I++F++ +P+ +E L +L
Sbjct: 63 FKKFPDALALANADLEELENLVRSTGFYRNKAKNIQSACQMIIDKFNSHVPKQMEQLLQL 122
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+ RK ANV+L+ +GI + VDTH+ R+S R+GL P K+E+ L+ +IP
Sbjct: 123 PGVARKTANVVLAHGYGIIVGVTVDTHVKRLSQRLGLTEHSNPVKIERDLMELIPQPDWE 182
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
N L+ HGR +CKA+ P C C++++LC
Sbjct: 183 NWSIRLIYHGRAICKAKNPACNQCLLADLCP 213
>gi|240146275|ref|ZP_04744876.1| endonuclease III [Roseburia intestinalis L1-82]
gi|257201577|gb|EEU99861.1| endonuclease III [Roseburia intestinalis L1-82]
gi|291538985|emb|CBL12096.1| Predicted EndoIII-related endonuclease [Roseburia intestinalis
XB6B4]
Length = 212
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E+ ++P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MRKKELAKEVIERLKKEYPDAGCSLEYDQAWKLLVSVRLAAQCTDARVNIVVEKLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++++ +R G+ + K+ +I + IL ++ +P+ + L +LPG+GR
Sbjct: 61 DVKALAEAPVEEIEEIVRPCGLGKSKARDISACMKILWEQYGGNVPEDFDSLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R++NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLANRIGLVDGIKEPKKVEMALWKIIPPEEGNDLCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
V HGR VC AR KP C C ++++CK+
Sbjct: 181 FVYHGREVCTARTKPYCDRCCLNDVCKK 208
>gi|189462599|ref|ZP_03011384.1| hypothetical protein BACCOP_03289 [Bacteroides coprocola DSM 17136]
gi|189430760|gb|EDU99744.1| hypothetical protein BACCOP_03289 [Bacteroides coprocola DSM 17136]
Length = 215
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 127/207 (61%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +++ F P + EL+Y N F L++AV+LSAQ TD VN T LF
Sbjct: 1 MKKQELYKQVITYFQQAIPVAETELHYENPFQLLIAVILSAQCTDKRVNMITPPLFSAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + + YIR++ K+++++ ++ +L+ +F +++P TLE L +LPG+GR
Sbjct: 61 TPEALANTTPEVVYEYIRSVSYPNNKAKHLVGMAQMLVKDFQSEVPGTLEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+ F + VDTH+FR+S+RIGL P P E+ L++ IP AH+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPKTCTTPLATEKHLVKYIPENLIPTAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRYVC AR P+C+ C ++ +CK
Sbjct: 181 WLILHGRYVCTARNPKCEECGLNGICK 207
>gi|34811453|pdb|1ORN|A Chain A, Structure Of A Trapped Endonuclease Iii-Dna Covalent
Intermediate: Estranged-Guanine Complex
gi|34811456|pdb|1ORP|A Chain A, Structure Of A Trapped Endonuclease Iii-Dna Covalent
Intermediate: Estranged-Adenine Complex
Length = 226
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 136/212 (64%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ T +++ + +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 2 SHMLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEK 61
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP +A+ ++L+ IR+IG+YR K+ NI L +LI++++ ++P+ + L +LPG+
Sbjct: 62 YRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGV 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV++S+AFG+P I VDTH+ R+S R+G + +VE++L++IIP + H
Sbjct: 122 GRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ GRY CKA+ PQC SC + +LC+ K+
Sbjct: 182 HRMIFFGRYHCKAQSPQCPSCPLLHLCREGKK 213
>gi|188997398|ref|YP_001931649.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932465|gb|ACD67095.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
Length = 209
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 122/202 (60%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+++ +P PK EL Y N F L++ ++LSAQ+TD VN+ + LF+ TPQ +
Sbjct: 6 QQLIERLKKHFPDPKIELNYENEFQLLIVIILSAQTTDKKVNQVSPILFKKYPTPQALAN 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
K L+ I+ +G Y++K++ I + ++ +F +IP+TLE LT LPG+GRK A+ +L
Sbjct: 66 ADLKDLEEIIKPLGFYKRKAKLIKECAKAILEKFSGQIPKTLEELTSLPGVGRKTASALL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
A+ IP I VDTH+ R++ R+ + +P KVE+ L + ++ LVL GRY+
Sbjct: 126 VNAYKIPAIVVDTHVKRVAKRLKITNQTSPEKVEKDLTKFFSKENWVYISNALVLFGRYI 185
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C A KP+C+ C +S++C K+
Sbjct: 186 CTANKPKCKECYVSDICPYEKK 207
>gi|154484780|ref|ZP_02027228.1| hypothetical protein EUBVEN_02498 [Eubacterium ventriosum ATCC
27560]
gi|149734628|gb|EDM50545.1| hypothetical protein EUBVEN_02498 [Eubacterium ventriosum ATCC
27560]
Length = 211
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I ++P L Y + + L+++V L+AQ TD VN HL+E
Sbjct: 1 MRKKELAKIIIERLKEEYPDADCTLDYNDAWKLLISVRLAAQCTDARVNVVVPHLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +++ +R G+ R K+ +I +L +EFD+K+P L +LPG+GR
Sbjct: 61 TIDALANADVSEIEEIVRPCGLGRSKARDISLCMRMLRDEFDSKVPDDFNQLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDNIKEPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKARK-PQCQSCIISNLCKR 224
LV HGR +C AR P C C ++++CK+
Sbjct: 181 LVYHGREICTARTAPHCDRCCLNDVCKK 208
>gi|313893605|ref|ZP_07827174.1| endonuclease III [Veillonella sp. oral taxon 158 str. F0412]
gi|313441876|gb|EFR60299.1| endonuclease III [Veillonella sp. oral taxon 158 str. F0412]
Length = 211
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF
Sbjct: 1 MRVTKAIKAEQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KMLAIG KL+ I+ G+Y+ K++N+I+ IL++++ ++P+ + L LPG+G
Sbjct: 61 NHPAKMLAIGVNKLETLIKDCGLYKSKAKNLIATCQILVDQYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR+SNR+ L KTP ++E L + IP + AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMELKLQKAIPKEDWAAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR VCKARKP C C +++LC +
Sbjct: 181 LIYHGRKVCKARKPLCDDCFLNHLCPSAGK 210
>gi|225018418|ref|ZP_03707610.1| hypothetical protein CLOSTMETH_02365 [Clostridium methylpentosum
DSM 5476]
gi|224948836|gb|EEG30045.1| hypothetical protein CLOSTMETH_02365 [Clostridium methylpentosum
DSM 5476]
Length = 215
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 114/209 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +P L + + L++A LSAQ TD VN TK LF+
Sbjct: 6 MTKKQRAAAAVEKLKQLYPEAICSLKHTKPYELLLATRLSAQCTDARVNIVTKTLFDRYR 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A ++ IR G+++ K+++++ + L+ +++ +P T+E L +LPG+GR
Sbjct: 66 SMEDFAAADVDEVAGIIRPCGLFKTKAKDLVGICQKLLLDYNGVVPDTIEELIKLPGVGR 125
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+I+ + P + DTH+ RISNR+GL K P KVE L +I+PP+ + + +
Sbjct: 126 KTANLIVGDVYHKPAVVTDTHLIRISNRLGLVDVKEPRKVEDQLRKILPPEESNDFCHRM 185
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V GR C+AR P+C C ++++CK +
Sbjct: 186 VHFGRDTCRARGPRCGECALADICKSAGK 214
>gi|34811270|pdb|1P59|A Chain A, Structure Of A Non-Covalent Endonuclease Iii-Dna Complex
Length = 226
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 135/212 (63%), Gaps = 1/212 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ T +++ + +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 2 SHMLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEK 61
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP +A+ ++L+ IR+IG+YR K+ NI L +LI++++ ++P+ + L +LPG+
Sbjct: 62 YRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGV 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK ANV++S AFG+P I VDTH+ R+S R+G + +VE++L++IIP + H
Sbjct: 122 GRKTANVVVSTAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITH 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ GRY CKA+ PQC SC + +LC+ K+
Sbjct: 182 HRMIFFGRYHCKAQSPQCPSCPLLHLCREGKK 213
>gi|238923093|ref|YP_002936606.1| endonuclease III [Eubacterium rectale ATCC 33656]
gi|238874765|gb|ACR74472.1| endonuclease III [Eubacterium rectale ATCC 33656]
Length = 226
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
SY+ + + K E+ +P L Y + + L+V+V L+AQ TD VN
Sbjct: 5 SYEIKNKEAHMTKEKLAIEVIKRLKTAYPRTDCTLEYDDAWKLLVSVRLAAQCTDARVNV 64
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
LF+ + + + ++ +R G+ + K+ +I + +L ++F +P +
Sbjct: 65 VVVDLFKKYPSIEALADADVSDIEEIVRPCGLGKSKARDISACMRMLRDDFGGLVPDNMT 124
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIP 187
L +LPG+GRK AN+I+ +G P I DTH R+ NRIGL G P KVE L +IIP
Sbjct: 125 DLLKLPGVGRKSANLIMGDVYGKPAIVTDTHCIRLCNRIGLVDGIKDPKKVEMELWKIIP 184
Query: 188 PKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLC 222
P+ + + LV HGR VC AR P C C+++++C
Sbjct: 185 PEESNDFCHRLVDHGRAVCTARTTPHCDMCVLNDIC 220
>gi|254820838|ref|ZP_05225839.1| hypothetical protein MintA_12968 [Mycobacterium intracellulare ATCC
13950]
Length = 226
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 102/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P EL + L VA +LSAQSTD VN T LF+ +
Sbjct: 3 RALAQAFPDAHCELDFTTPLELTVATILSAQSTDKRVNLTTPALFKRYPSALDYAQADRA 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L+N IR G +R K+ ++I L L+ FD ++P T+ L LPG+GRK ANVIL AF
Sbjct: 63 ELENLIRPTGFFRNKASSLIGLGQALVERFDGEVPPTMAELVTLPGVGRKTANVILGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I VDTH R+ +R K P K+E S+ +I + ++ HGR VC AR
Sbjct: 123 GIPGITVDTHFARLVHRWRWTTDKDPVKIEHSVGELIERSEWTMLSHRVIFHGRRVCHAR 182
Query: 210 KPQCQSCIISNLCKRI 225
KP C C+I+ C
Sbjct: 183 KPACGVCLIAKDCPSF 198
>gi|300711590|ref|YP_003737404.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|299125273|gb|ADJ15612.1| endonuclease III [Halalkalicoccus jeotgali B3]
Length = 227
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ E+ S ++P L + N L++AV+LSAQ TD VN T LF D +
Sbjct: 10 EQTSEVVDRLSAEYPDTTISLDFSNRLELLIAVILSAQCTDERVNGVTADLFSKYDGLED 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+++L I +I Y K+ I I+I E D +P T++ LT LPG+GRK AN
Sbjct: 70 YANAAQEQLAEDISSITYYNNKAGYIREACAIIIEEHDGGVPDTMDELTDLPGVGRKTAN 129
Query: 143 VILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+L + + VDTH+ R++ R+G+ ++P K+E+ L+ ++P + + + H
Sbjct: 130 VVLQHGHELVEGVVVDTHVQRLTRRLGITEERSPQKIERELMALLPRERWQAFTHLCISH 189
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GR C AR P C C++ ++C K
Sbjct: 190 GRATCTARNPDCSDCVLEDVCPSSK 214
>gi|153815700|ref|ZP_01968368.1| hypothetical protein RUMTOR_01937 [Ruminococcus torques ATCC 27756]
gi|145846941|gb|EDK23859.1| hypothetical protein RUMTOR_01937 [Ruminococcus torques ATCC 27756]
Length = 222
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + ++ ++PS L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 8 IPKMTKKQRALQVIERLKKEYPSAGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEGLYE 67
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + +++ +R G+ R K+ +I ++ +E++ K+P + L +LPG
Sbjct: 68 KYPTVEALAEADVDEIEKIVRPCGLGRSKARDISGCMKMIRDEYEGKVPDDFDALMKLPG 127
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNA 194
+GRK AN+I+ FG P I DTH R+ NRIGL G P KVE +L +IIPP+ +
Sbjct: 128 VGRKSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIKEPKKVEMALWKIIPPQEGSDF 187
Query: 195 HYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ LV HGR VC AR KP C+ C ++++CK+
Sbjct: 188 CHRLVFHGRDVCTARTKPYCEKCCLADICKK 218
>gi|114769971|ref|ZP_01447581.1| endonuclease III [alpha proteobacterium HTCC2255]
gi|114549676|gb|EAU52558.1| endonuclease III [alpha proteobacterium HTCC2255]
Length = 220
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 106/213 (49%), Positives = 150/213 (70%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + + EIF F PKGEL +VN FTL+VAV LSAQSTD+ VNKATK LF
Sbjct: 5 RMPKQLNYQNIYEIFSRFREHEAEPKGELDHVNAFTLVVAVALSAQSTDLGVNKATKKLF 64
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
IADTP+KM+A+G + +I+TIG+YR+K++N+I +S +LI ++++ +P + L LP
Sbjct: 65 AIADTPEKMIALGLNGVMEHIKTIGLYRQKAKNVIKMSKLLIEKYNSVVPSSRAALEGLP 124
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK ANV+L+M FG PT VDTHI R NR G+A GK VE+++ +P + Q++A
Sbjct: 125 GVGRKTANVVLNMWFGQPTQAVDTHILRFGNRSGVAIGKDVVAVERAIEDHVPAEFQHHA 184
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+W++LHGRY CKARKP C +CII +LC+ ++
Sbjct: 185 HHWMILHGRYTCKARKPVCMNCIIEDLCQFEEK 217
>gi|312898869|ref|ZP_07758257.1| endonuclease III [Megasphaera micronuciformis F0359]
gi|310620031|gb|EFQ03603.1| endonuclease III [Megasphaera micronuciformis F0359]
Length = 215
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 131/206 (63%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ +E+ F + K L Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MITKKKKQEMLQRFQDTYGIMKPALIYQSPFELLVAVVLSAQCTDERVNIVTAGLFPEYA 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+KML +G L+ I+T G+Y K++N+ + IL E+ ++P+T + L +LPG+GR
Sbjct: 61 SPEKMLTLGIDGLEEKIKTCGLYHSKAKNLSATCRILCEEYQGEVPKTFDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV++S+ + P I VDTH+FR++NR+ LA G TP+ VE+ L + IP + AH+WL
Sbjct: 121 KTANVLVSVLYDTPAIAVDTHVFRVANRMQLAVGTTPDSVEKGLQKAIPVEWWSRAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR +CKARKP C+ C +++C
Sbjct: 181 IWHGRRICKARKPLCEDCFQNDICPS 206
>gi|218247153|ref|YP_002372524.1| endonuclease III [Cyanothece sp. PCC 8801]
gi|257060225|ref|YP_003138113.1| endonuclease III [Cyanothece sp. PCC 8802]
gi|218167631|gb|ACK66368.1| endonuclease III [Cyanothece sp. PCC 8801]
gi|256590391|gb|ACV01278.1| endonuclease III [Cyanothece sp. PCC 8802]
Length = 220
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI L +P L Y + L+VA +LSAQ TD VNK T LF
Sbjct: 11 KQRALEILVLLKRLYPDATCSLTYDSVVQLLVATILSAQCTDERVNKVTPKLFSRFPDAL 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++L+ IR+ G YR K++NI ++ EF+ ++P+ +E L LPG+ RK A
Sbjct: 71 SLAKADREELEEIIRSTGFYRNKAKNIQGACQKIVKEFEGQVPKQMEQLLSLPGVARKTA 130
Query: 142 NVILSMAFGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ FGI DTH+ R+S R+GL P K+E+ L++++P N ++
Sbjct: 131 NVVLAHGFGINQGVTVDTHVKRLSGRLGLTKETDPVKIERDLMKLLPQPDWENFSIRIIY 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR VC ARKP C +C +++LC +
Sbjct: 191 HGRAVCSARKPDCANCSLAHLCPSV 215
>gi|320106348|ref|YP_004181938.1| endonuclease III [Terriglobus saanensis SP1PR4]
gi|319924869|gb|ADV81944.1| endonuclease III [Terriglobus saanensis SP1PR4]
Length = 254
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 81/232 (34%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 3 SSKKSDSYQGNSPLGC---------LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIV 53
+ K+ + + P+ P+ + I + +P L + + + L++
Sbjct: 15 APSKARAIAASEPVSPKIKPGKTKKPLAPERVAAILDGLAKAYPDAVCALIHNSAWQLVI 74
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
A LSAQ+TDV VN T LF I TP+ + ++ IR G Y K++NI +
Sbjct: 75 ATALSAQTTDVTVNSVTPMLFRIFPTPKALAEASIPAIEQIIRPTGFYHSKAKNIQGAAR 134
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPG 172
+++ F NK+PQT+E L LPG+ RK ANV+L F I + + VDTH+ RIS R+ L
Sbjct: 135 VIVENFGNKVPQTIEELITLPGVARKTANVVLGSWFKIASGVVVDTHVLRISRRLELTKN 194
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P KVEQ L+RI+P + + ++ HGR VC ARKP+C C I LC
Sbjct: 195 IEPVKVEQDLIRILPQGQWIDYSHRVIFHGRQVCIARKPRCADCSIETLCNS 246
>gi|311030330|ref|ZP_07708420.1| endonuclease III [Bacillus sp. m3-13]
Length = 217
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K+++E+ + +P EL + N F L++AV LSAQ TD VNK TK+LFE
Sbjct: 1 MLNLKQIKEVVDVMGEMFPDAHCELNHKNPFELVIAVALSAQCTDALVNKVTKNLFEKYQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ L + ++LQ IR+IG++R K++NI SL +L+ E++ ++P+ + L +LPG+GR
Sbjct: 61 KPEDYLQVTLEELQQDIRSIGLFRNKAKNIRSLCQLLLEEYNGQVPKERDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L+R IP + + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICKWKDSVLEVEKTLMRKIPKEKWSDTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ PQC+SC + +C+ K+
Sbjct: 181 LIFFGRYHCKAQNPQCESCPLLEMCREGKK 210
>gi|254559174|ref|YP_003066269.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Methylobacterium extorquens DM4]
gi|254266452|emb|CAX22216.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Methylobacterium extorquens DM4]
Length = 233
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 144/198 (72%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF IADTPQKML +
Sbjct: 22 EIFSRLRAADPEPRSELEYLNPYTLLVAVVLSAQATDKSVNLATAPLFAIADTPQKMLDL 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE++++++IRTIG++ K++N+I+LS IL+ D +P E L LPG+G K A+V+L+
Sbjct: 82 GEEQVRHFIRTIGLFNTKAKNVIALSRILLERHDGAVPCEAEALEVLPGVGTKTASVVLN 141
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG+P I VDTH FR+SNRI L G T +KV+ L +P + NAH+WL+LHGRY+C
Sbjct: 142 VAFGVPRIAVDTHNFRVSNRIPLFSGATTDKVQAGLEARVPEPFRLNAHHWLILHGRYIC 201
Query: 207 KARKPQCQSCIISNLCKR 224
KAR+P+C C I++LC+
Sbjct: 202 KARRPECPRCSIADLCRY 219
>gi|189184853|ref|YP_001938638.1| endonuclease III [Orientia tsutsugamushi str. Ikeda]
gi|189181624|dbj|BAG41404.1| endonuclease III [Orientia tsutsugamushi str. Ikeda]
Length = 212
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 109/201 (54%), Positives = 150/201 (74%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E+IF F+ + P PK EL Y NHFTL+VAV+LSAQSTD VNKATK LF+ TP++ L
Sbjct: 6 IEKIFSKFAERCPDPKTELEYCNHFTLLVAVILSAQSTDNAVNKATKELFKYYKTPEQFL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ L+ +I++IG+Y K++NII LS IL+ E++ ++P T++ L LPG+GRK ANV+
Sbjct: 66 QLGEENLKKHIKSIGLYNNKAKNIIKLSEILVKEYNGQVPNTMKELEALPGVGRKSANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
LS AFG+ T+ VDTH+FR++ RIGLA G TP KVE LL +IP + AH+WLVLHGRY
Sbjct: 126 LSCAFGVATMPVDTHVFRVAKRIGLATGATPLKVESELLSVIPDRWLLLAHHWLVLHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKA+ P+C C ++N C+
Sbjct: 186 ICKAQTPKCSECFLNNYCQYF 206
>gi|95929994|ref|ZP_01312734.1| endonuclease III [Desulfuromonas acetoxidans DSM 684]
gi|95133963|gb|EAT15622.1| endonuclease III [Desulfuromonas acetoxidans DSM 684]
Length = 211
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 3/210 (1%)
Query: 19 LYTPKE---LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ E I + +P + L + N L++A LLSAQ+TD+ VN T+ LFE
Sbjct: 1 MTKKEKKKWFETIITILDQHYPEAQCSLNFSNPLELVIATLLSAQTTDIRVNLVTRKLFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+++ IR+IG YR K+++I++ + +L +F ++P L+ L +LPG
Sbjct: 61 RYRDVHAYAQADIHEVEEIIRSIGCYRVKAKHIVAAAQLLCQKFSGQVPDQLDDLIQLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+LS AF P VDTH+ R++ R+G P K+E L R + P +
Sbjct: 121 VGRKTANVVLSNAFDKPGFPVDTHVKRVARRLGWTRQSDPVKIESELCRYVEPPLWGHTS 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR +CKAR PQC+ C + N CK++
Sbjct: 181 HLLIYHGREICKARSPQCERCPVENQCKKV 210
>gi|242373761|ref|ZP_04819335.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis M23864:W1]
gi|242348498|gb|EES40100.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis M23864:W1]
Length = 219
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD VN+ T+ LFE
Sbjct: 1 MISKKKGLEMIDVIADMFPDAECELKHDNAFELTIAVLLSAQCTDNLVNRVTRTLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L L+++FD +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCRSLLDQFDGEIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L IIP + +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCDIIPRERWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLLDDCREGQK 210
>gi|212638977|ref|YP_002315497.1| putative EndoIII-related endonuclease [Anoxybacillus flavithermus
WK1]
gi|212560457|gb|ACJ33512.1| Predicted EndoIII-related endonuclease [Anoxybacillus flavithermus
WK1]
Length = 225
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 137/217 (63%), Gaps = 1/217 (0%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
G + T +++ + +P+ EL + N F L++AV+LSAQ TD VNK TK
Sbjct: 3 SRRKDGYMLTKQQIRYCLDEIANMFPNAHCELVHRNPFELLIAVVLSAQCTDALVNKVTK 62
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LFE TP+ +++ ++LQ IR+IG+YR K++NI L ILI ++ ++P+ + L
Sbjct: 63 QLFEKYKTPEDYVSVPLEELQQDIRSIGLYRNKAKNIQQLCRILIEQYSGEVPKNRDELM 122
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKH 190
+LPG+GRK ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L++ IP +
Sbjct: 123 KLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEETLMKKIPKEE 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+ L+ GRY CKA+ P+C C + +LC+ K+
Sbjct: 183 WSVTHHRLIFFGRYHCKAQSPKCDVCPLLHLCREGKK 219
>gi|167747301|ref|ZP_02419428.1| hypothetical protein ANACAC_02015 [Anaerostipes caccae DSM 14662]
gi|167653279|gb|EDR97408.1| hypothetical protein ANACAC_02015 [Anaerostipes caccae DSM 14662]
Length = 235
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 121/224 (54%), Gaps = 1/224 (0%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQ 60
+S + + + + T + + +I + + + K L + N + L++A +LSAQ
Sbjct: 9 LSEETHKEQKPMAKVSKRVTKERVRKICDILNETYTTEYKCYLNHENAWQLLIATMLSAQ 68
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
TD VN T+ LF+ + + ++L+ I + G Y+ K++NII + +I
Sbjct: 69 CTDARVNIVTEKLFKKYTSLEAFARADIRELERDIYSTGFYKNKAKNIIGAAGQIIERHG 128
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++P+++E LT L G+GRK ANVI F P+I VDTH+ RIS ++ L P K+E
Sbjct: 129 GEVPESIEELTALDGVGRKTANVIRGNIFHEPSIVVDTHVKRISKKLYLTKNDDPVKIEH 188
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L++++P + + ++ HGR VC AR+P+C C + ++C
Sbjct: 189 DLMKVLPKEQWILYNIQIITHGRNVCIARRPKCGECTLQSVCPS 232
>gi|217967076|ref|YP_002352582.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
gi|217336175|gb|ACK41968.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
Length = 210
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 127/207 (61%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ EI + PK L + N + L+VA +LSAQ+TD VN T+ LF+
Sbjct: 1 MDKREQVIEILKRLRTIY-EPKIALKFSNPWELLVATILSAQTTDERVNMVTEKLFKKYR 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ L + ++L+ IR++ Y+ K++NI + + I++ +++ K+P T+E L +LPG+ R
Sbjct: 60 SPEDYLKVSLEELEQDIRSVNYYKTKAKNIRACAQIIVEKYNGKVPDTMEELLKLPGVAR 119
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS +G I +DTH+ R+S R+ L K +K+EQ L++I+P N Y
Sbjct: 120 KTANVVLSAGYGKNEGIVIDTHVNRLSKRLNLGKEKNRDKLEQELMKIVPKDEWANFSYL 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR VCKA+ P+C CI+ ++C
Sbjct: 180 LIHHGRNVCKAKNPKCDECILKDICPS 206
>gi|310288124|ref|YP_003939383.1| Endonuclease III [Bifidobacterium bifidum S17]
gi|313140765|ref|ZP_07802958.1| endonuclease III [Bifidobacterium bifidum NCIMB 41171]
gi|309252061|gb|ADO53809.1| Endonuclease III [Bifidobacterium bifidum S17]
gi|313133275|gb|EFR50892.1| endonuclease III [Bifidobacterium bifidum NCIMB 41171]
Length = 220
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 5/207 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + E + L +P PK L + + L++A +LSAQ+TD VN T LF
Sbjct: 11 QRMHEEYALLVEAFPHPKCALDFTSPLQLLIATVLSAQTTDKRVNTVTPELFSRFPDAAS 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + +++ I +G YR K+++++ L+ +L + F ++P T++ L LPG+GRK AN
Sbjct: 71 LAAANPQDVEDIIHPLGFYRSKTKHLLGLAVVLRDRFGGEVPDTMDSLVTLPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AFG+P VDTH+ R+ + P +E+ + P + +
Sbjct: 131 VVLGNAFGVPGFPVDTHVIRVTGRLRWRGDWNSSSPDPVHIEREICSYFEPSQWTDLSHR 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGR C ARKP C C + + C
Sbjct: 191 LILHGRATCHARKPDCAVCPLHDTCPS 217
>gi|58616970|ref|YP_196169.1| endonuclease III [Ehrlichia ruminantium str. Gardel]
gi|58416582|emb|CAI27695.1| Endonuclease III [Ehrlichia ruminantium str. Gardel]
Length = 211
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 144/209 (68%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ +F F PK EL Y N FTL+VA++LSA++TDV+VNK T LF+IAD
Sbjct: 1 MMDENKINLLFSKFQEHNHYPKIELKYSNEFTLLVAIVLSARTTDVSVNKITSKLFKIAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKML +GE+ L+ YI TIG+Y KS+NII+LS I+IN++ ++P + L LPG+GR
Sbjct: 61 TPQKMLNLGEEGLKKYINTIGLYNAKSKNIIALSSIIINQYHGRVPLEFDALVALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV L+ +PT+ VDTH+FR+SNR+GL K E +L+ +IP + AH+WL
Sbjct: 121 KSANVFLNTWLNLPTVAVDTHVFRVSNRVGLVKENNVLKTESALVNVIPEQWLLYAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VLHGRY+CK+RKP C CI+ +LC+ +
Sbjct: 181 VLHGRYICKSRKPLCGKCIVQDLCEYESK 209
>gi|153853551|ref|ZP_01994931.1| hypothetical protein DORLON_00920 [Dorea longicatena DSM 13814]
gi|149753706|gb|EDM63637.1| hypothetical protein DORLON_00920 [Dorea longicatena DSM 13814]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 1/206 (0%)
Query: 22 PKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K EI L K+ L Y + L++A +LSAQ TD VN TK LF +
Sbjct: 2 KKRTGEILELLDEKYGTEFICYLNYETPWQLLIATMLSAQCTDARVNIVTKDLFRKYPSV 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ K+L+ I+ G Y K++NII+ + ++++ ++P LE L L G+GRK
Sbjct: 62 EAFADADLKELEQDIKPTGFYHNKAKNIIACMKDIRDKYNGEVPSELEDLLSLAGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + +P++ VDTH+ RISNR+GL + P+K+EQ L++ +P H + ++
Sbjct: 122 ANVIRGNIYHVPSVVVDTHVKRISNRLGLTKNQDPDKIEQDLMKELPEDHWILWNIHIIT 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C AR P+C+ C + CK K
Sbjct: 182 FGRTICSARSPKCEDCFLQKYCKEYK 207
>gi|311064997|ref|YP_003971723.1| endonuclease III Nth [Bifidobacterium bifidum PRL2010]
gi|310867317|gb|ADP36686.1| Nth Endonuclease III [Bifidobacterium bifidum PRL2010]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L +P PK L + + L++A +LSAQ+TD VN T LF + A
Sbjct: 5 YALLVEAFPHPKCALDFTSPLQLLIATVLSAQTTDKRVNTVTPELFSRFPDAASLAAANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +++ I +G YR K+++++ L+ +L + F ++P T++ L LPG+GRK ANV+L A
Sbjct: 65 QDVEDIIHPLGFYRSKTKHLLGLAAVLRDRFGGEVPDTMDSLVTLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VDTH+ R+ + P +E+ + P + + L+LHGR
Sbjct: 125 FGVPGFPVDTHVIRVTGRLRWRGDWNSSSPDPVHIEREICSYFEPSQWTDLSHRLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C ARKP C+ C + + C
Sbjct: 185 ATCHARKPDCEVCPLHDTCPS 205
>gi|257051671|ref|YP_003129504.1| endonuclease III [Halorhabdus utahensis DSM 12940]
gi|256690434|gb|ACV10771.1| endonuclease III [Halorhabdus utahensis DSM 12940]
Length = 228
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ +P L + N L+VAV+LSAQ TD VN+ T LFE TP
Sbjct: 8 RSAQATEVIERLHDAYPDTTISLTFSNRLELLVAVVLSAQCTDERVNETTPELFETYQTP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A E++L I I + K+ + + IL+ E D ++P T++ LT LPG+GRK
Sbjct: 68 EDYAAADEEQLAEDIYGITFHNNKAGYLKGIGEILVEEHDGEVPDTMDALTALPGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ R++ R+GL + P+ +E L+ IIP + ++
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRLTRRLGLTEEERPDAIEDDLMEIIPEDEWQAFTHLMI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VC AR P C C + ++C K
Sbjct: 188 SHGRAVCTARNPDCGDCALEDVCPSSK 214
>gi|162145891|ref|YP_001600349.1| endonuclease III [Gluconacetobacter diazotrophicus PAl 5]
gi|161784465|emb|CAP53995.1| putative endonuclease III [Gluconacetobacter diazotrophicus PAl 5]
Length = 215
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 138/208 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T KE+E L + P EL +V+ +TL+VAV LSAQ+TD +VN+ATK LF A
Sbjct: 1 MTLKEVERFITLLAEAHPDAASELDFVDDYTLLVAVALSAQATDASVNRATKGLFRDAPD 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M+A+GE + +IR+IG++R K+ N+++LS L+++ + ++P+ L LPG+GRK
Sbjct: 61 PAAMVALGEDGVAAHIRSIGLWRTKARNVVALSQALLDQHEGQVPRDRAALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV++++AFG T+ VDTHIFRI NR GLAPG+T VE L+ IP AH+WL+
Sbjct: 121 TANVVMNVAFGDSTMAVDTHIFRIGNRTGLAPGRTTRAVEDQLVARIPAPLLRPAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR+P+C C C+ +
Sbjct: 181 LHGRYVCKARRPECWRCPAQEPCQYTAK 208
>gi|229918737|ref|YP_002887383.1| endonuclease III [Exiguobacterium sp. AT1b]
gi|229470166|gb|ACQ71938.1| endonuclease III [Exiguobacterium sp. AT1b]
Length = 219
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 123/210 (58%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +L+E+ +P EL + N F L+VAV LSAQ+TD VNK T LFE
Sbjct: 1 MLTRAQLQEVSDTMKQMFPDAHCELTHQNPFELVVAVALSAQATDALVNKVTPGLFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M A +++ I+ IG+YR K++N+ +LS ++NE +P L LPG+GR
Sbjct: 61 TVEAMAAADVSEIEALIKRIGLYRNKAKNVKALSEKIVNEHGGIVPSDRASLEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF P VDTH+ R+S R+G+ +VE +L++ P + H+
Sbjct: 121 KTANVVLSVAFHEPAFAVDTHVERVSKRLGICRWKDNVRQVEDTLMKKFPREEWSQLHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA++P C++C + ++C+ K+
Sbjct: 181 FIFFGRYHCKAQRPGCEACPLLHMCREGKK 210
>gi|297243033|ref|ZP_06926971.1| EndoIII-like endonuclease [Gardnerella vaginalis AMD]
gi|296889244|gb|EFH27978.1| EndoIII-like endonuclease [Gardnerella vaginalis AMD]
Length = 224
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
N + + L + P PK L + N F L++A +LSAQ+TD VN
Sbjct: 4 RSSNMRESKQAKLARIYAEYDLLCKEIPEPKCALNFKNPFELLIATVLSAQTTDRRVNIV 63
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF I + A ++++ I +G YR K++NIISLS L+N F +P +E
Sbjct: 64 TPELFSIFPNASSLAAAPVSQVESIIYPLGFYRVKAQNIISLSACLLNNFSGIVPSNMED 123
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLRII 186
L LPG+GRK ANV+L AFG+P VDTH+ R++ R+G P +E+ +
Sbjct: 124 LISLPGVGRKTANVVLGNAFGLPGFPVDTHVIRVTGRLGWRKVQNRPNPVAIEREITAYF 183
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
PK N + L+LHGR +C AR P+C SC ++ C
Sbjct: 184 APKEWTNLSHRLILHGRKICTARNPKCVSCPLNTTCPS 221
>gi|239815553|ref|YP_002944463.1| endonuclease III [Variovorax paradoxus S110]
gi|239802130|gb|ACS19197.1| endonuclease III [Variovorax paradoxus S110]
Length = 215
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 140/205 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ F P+P+ EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKKDNIPLFFATLQAANPTPETELEYATPFELLAAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L++YI+TIG+YR K++++I IL+ + ++P+T L LPG+GRK
Sbjct: 61 PQAILRLGVEGLEDYIKTIGLYRSKAKHLIETCRILVEKHGGEVPRTRAELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG TI VDTHIFR+SNR GLAPGKTP +VE L + +P + + +AH+WL+
Sbjct: 121 TANVVLNVAFGEATIAVDTHIFRVSNRTGLAPGKTPLEVELKLEKRVPFEFRLHAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRY+C AR P+C C ++ C
Sbjct: 181 LHGRYICVARTPKCWECAVAPFCDY 205
>gi|90415789|ref|ZP_01223722.1| endonuclease III [marine gamma proteobacterium HTCC2207]
gi|90332163|gb|EAS47360.1| endonuclease III [marine gamma proteobacterium HTCC2207]
Length = 217
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 105/204 (51%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + +P L + N+F L+VAVLLSAQ TD+ VN+ T LF +AD
Sbjct: 1 MLKQQRADYILDKLNEIYPETPIPLDHKNNFELLVAVLLSAQCTDIRVNQVTPALFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M + + +R G+ +KS I LS +L+ ++D +P + L LPG+G
Sbjct: 61 NAFDMQHVPLDDIYKIVRPCGLAPQKSSAISVLSKMLVEQYDGVVPDDWKALESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V++S FG P VDTHI R++ R GL G + + E+ L ++ P + H +
Sbjct: 121 KTAGVVMSQGFGHPAFPVDTHIHRLAQRWGLTKGNSVTQTERDLKKLFPKETWNALHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR + C I C
Sbjct: 181 IFYGREFCSARGCDGRVCEICTTC 204
>gi|295398906|ref|ZP_06808888.1| endonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|312110487|ref|YP_003988803.1| endonuclease III [Geobacillus sp. Y4.1MC1]
gi|294978372|gb|EFG53968.1| endonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|311215588|gb|ADP74192.1| endonuclease III [Geobacillus sp. Y4.1MC1]
Length = 216
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +++ +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 1 MLTKQQIRYCLDKMKEMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +A+ ++LQ IR+IG+YR K++NI L +LI ++ ++PQ + L +LPG+GR
Sbjct: 61 TPEDYVAVPLEELQQDIRSIGLYRNKAKNIQKLCAMLIEKYGGQVPQDRDELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+G + +VE++L++ IP + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLGFCRWEDSVLEVEKTLMKKIPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC C + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQSPQCHVCPLLDLCREGKK 210
>gi|296113032|ref|YP_003626970.1| endonuclease III [Moraxella catarrhalis RH4]
gi|295920726|gb|ADG61077.1| endonuclease III [Moraxella catarrhalis RH4]
Length = 237
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 138/211 (65%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
N+P + F + P EL+Y + F L++AV+LSAQ+TD +VN AT
Sbjct: 13 ANTPPSRSMNANKRLVFFQKLAKHIKEPVTELHYTSEFELLIAVMLSAQATDKSVNIATD 72
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF++A+TP+ +L +G L++YI +IG+Y K+ N+I LI + + ++P+T + L
Sbjct: 73 KLFKVANTPKAILDLGLNNLKSYISSIGLYNSKAANVIKTCQDLITKHNGQVPRTRDELE 132
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
L G+GRK ANV+L+ AFG P + VDTHIFR+ NR GLA GKT VE++L++ IP K
Sbjct: 133 ALAGVGRKTANVVLNTAFGEPVMAVDTHIFRVGNRTGLATGKTVLAVEKALMKRIPAKFL 192
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+AH++L+LHGRY C AR+P+C +C++ + C
Sbjct: 193 VDAHHYLILHGRYTCTARQPKCGACVVFDEC 223
>gi|239906969|ref|YP_002953710.1| putative endonuclease III [Desulfovibrio magneticus RS-1]
gi|239796835|dbj|BAH75824.1| putative endonuclease III [Desulfovibrio magneticus RS-1]
Length = 211
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 1/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I +P PK L + N + L+VA +L+AQ TD VN T F P +
Sbjct: 7 RAAVIHDRLRPLYPDPKPALDHQNAYELLVATVLAAQCTDARVNTVTPEFFRRWPDPAAL 66
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+++ + G +R+K++N+++ IL+ + +IP T+ LT LPG+ RK AN+
Sbjct: 67 AKANIGEVEAVVHPTGFFRQKTKNLVTTGKILVERHNGRIPATMAELTALPGVARKTANI 126
Query: 144 ILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+LS A GI I VDTH+ R+S R+GL + P +E+ L+ + P+ ++ LVL G
Sbjct: 127 VLSNALGINVGIAVDTHVRRLSFRLGLTTSENPVIIEKDLMPLFAPEVYGEINHLLVLFG 186
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
R VCKAR+PQC C+++++C +
Sbjct: 187 REVCKARRPQCGDCVLNDVCPK 208
>gi|323693535|ref|ZP_08107739.1| endonuclease III [Clostridium symbiosum WAL-14673]
gi|323502390|gb|EGB18248.1| endonuclease III [Clostridium symbiosum WAL-14673]
Length = 211
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI ++P L Y + L+V+V L+AQ TD VN + L++
Sbjct: 1 MTKKELALEIIKRLKEEYPDAGCTLDYNQAWKLLVSVRLAAQCTDARVNVVVQDLYDKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + K++ +R G+ R K+ +I + IL ++ K+P+ + L +LPG+GR
Sbjct: 61 DVKALAEADVDKIEEIVRPCGLGRSKARDINACMKILWEQYGGKVPEDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDNIKDPKKVEMELWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C+ C + ++C
Sbjct: 181 LVYHGRDVCTARTKPHCEECCLKDIC 206
>gi|42520628|ref|NP_966543.1| endonuclease III [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99036070|ref|ZP_01315105.1| hypothetical protein Wendoof_01000051 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410367|gb|AAS14477.1| endonuclease III [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 212
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 113/211 (53%), Positives = 153/211 (72%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K++E IF F +PK EL Y+NH+TL+VA++LSA++TDV+VNK T+ LF IADT
Sbjct: 1 MDSKKVELIFEKFQESNSAPKIELNYINHYTLLVAIVLSARTTDVSVNKITRELFNIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KML +G+ +L+ + +IG+Y K++NII LS ILI +++K+P + L LPG+GRK
Sbjct: 61 PEKMLNLGQNELKKRVNSIGLYNSKAKNIIGLSKILIERYNSKVPTDFDDLVSLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ GIPT+ VDTH+FR+SNRIGL K K EQSLL ++P K+ AH+WLV
Sbjct: 121 SANVFLNSGLGIPTLAVDTHVFRVSNRIGLVKEKDVFKTEQSLLNVVPKKYLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNL----CKRIK 226
LHGRYVCKA+KP C++CII +L CKR K
Sbjct: 181 LHGRYVCKAQKPSCETCIIHDLCEFECKRYK 211
>gi|58578911|ref|YP_197123.1| endonuclease III [Ehrlichia ruminantium str. Welgevonden]
gi|58417537|emb|CAI26741.1| Endonuclease III [Ehrlichia ruminantium str. Welgevonden]
Length = 211
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 143/209 (68%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ +F F PK EL Y N FTL+VA++LSA++TDV+VNK T LF+IAD
Sbjct: 1 MMDENKINLLFSKFQEHNHYPKIELKYSNEFTLLVAIVLSARTTDVSVNKITSKLFKIAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKML +GE+ L+ YI TIG+Y KS+NII+LS I+IN++ +P + L LPG+GR
Sbjct: 61 TPQKMLNLGEEGLKKYINTIGLYNAKSKNIIALSSIIINQYHGMVPLEFDALVALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV L+ +PT+ VDTH+FR+SNR+GL K E +L+ +IP + AH+WL
Sbjct: 121 KSANVFLNTWLNLPTVAVDTHVFRVSNRVGLVKENNVLKTESALVNVIPEQWLLYAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VLHGRY+CK+RKP C CI+ +LC+ +
Sbjct: 181 VLHGRYICKSRKPLCSKCIVQDLCEYESK 209
>gi|260428917|ref|ZP_05782894.1| endonuclease III [Citreicella sp. SE45]
gi|260419540|gb|EEX12793.1| endonuclease III [Citreicella sp. SE45]
Length = 226
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 143/200 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+IADTPQKML
Sbjct: 22 MREIFTRFRESEPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRKLFQIADTPQKML 81
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE+ + +I+TIG+YR K++N+I LS IL+ E++ +P + L LPG+GRK ANV+
Sbjct: 82 DLGEEGVIEHIKTIGLYRNKAKNVIKLSKILVEEYNGTVPCSRAALESLPGVGRKTANVV 141
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK VE+++ IP Q +AH+WL+LHGRY
Sbjct: 142 LNMWWHYPAQAVDTHIFRVGNRTGICPGKDVVAVERAIEDNIPVDFQQHAHHWLILHGRY 201
Query: 205 VCKARKPQCQSCIISNLCKR 224
C ARKP+C +C+I +LC
Sbjct: 202 TCVARKPKCNACLIRDLCDF 221
>gi|291536153|emb|CBL09265.1| Predicted EndoIII-related endonuclease [Roseburia intestinalis
M50/1]
Length = 212
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E+ ++P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MRKKELAKEVIERLKKEYPDAGCSLEYDQAWKLLVSVRLAAQCTDARVNIVVEKLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++++ +R G+ + K+ +I + IL ++ +P+ + L +LPG+GR
Sbjct: 61 DVKALAEAPVEEIEEIVRPCGLGKSKARDISACMKILWEQYGGNVPEDFDSLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R++NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLANRIGLVDGIKEPKKVEMALWKIIPPEEGNDLCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
V HGR VC AR KP C C ++++CK+
Sbjct: 181 FVYHGREVCTARTKPYCDRCCLNDVCKK 208
>gi|157692734|ref|YP_001487196.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus pumilus
SAFR-032]
gi|157681492|gb|ABV62636.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus pumilus
SAFR-032]
Length = 220
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 141/210 (67%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K++ E + +P + EL + N F L++AV LSAQ TDV VNK TK LF+
Sbjct: 1 MLSKKQINECLDIIGDMFPEAECELVHSNPFELVIAVALSAQCTDVLVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI LS +LI E+ ++P+ + L +LPG+GR
Sbjct: 61 TPEDYLSVPLEELQQDIRSIGLYRNKAKNIQKLSKMLIEEYGGEVPKDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VEQ+L++ +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPEEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA++PQC+SC + ++C+ ++
Sbjct: 181 LIFFGRYHCKAQRPQCESCPLLDMCREGQK 210
>gi|78776716|ref|YP_393031.1| endonuclease III/Nth [Sulfurimonas denitrificans DSM 1251]
gi|78497256|gb|ABB43796.1| Endonuclease III/Nth [Sulfurimonas denitrificans DSM 1251]
Length = 228
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T +E++EI LF + EL Y N + L+VAV LSAQ TD VN T LF+
Sbjct: 20 TKEEIKEIHQLFIDNYSEAVTELDYKNAYELVVAVSLSAQCTDKRVNLITPALFKRYPDT 79
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + ++N I + + K++NII ++ + + + IP + L L G+G+K
Sbjct: 80 KSLAIADIEDVKNIINSCSFFNNKAKNIIEMAKRVEDVYGGNIPMDEKELITLSGVGQKT 139
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV++ G + VDTH+FR+S+R+GL+ T +K E +L++ + H +VL
Sbjct: 140 ANVVMIEYTGANLMAVDTHVFRVSHRLGLSSDATASKTEATLVKKF-KNNLRTLHQGMVL 198
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GRY+CKA+ P+C C +++ CK
Sbjct: 199 FGRYICKAKNPKCDECFLASYCKS 222
>gi|254450927|ref|ZP_05064364.1| endonuclease III [Octadecabacter antarcticus 238]
gi|198265333|gb|EDY89603.1| endonuclease III [Octadecabacter antarcticus 238]
Length = 228
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 105/211 (49%), Positives = 149/211 (70%), Gaps = 3/211 (1%)
Query: 17 GCLYTPKE---LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
GC+ + + EIF F P P GEL +VN +TL+VAV LSAQ+TD VNKAT L
Sbjct: 13 GCMAKQLDYHTIREIFTRFQAGEPEPLGELDHVNAYTLVVAVALSAQATDKGVNKATAAL 72
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F+IADTPQKML +G + +I+TIG++R K++N+I +S +L++E+D +P + L L
Sbjct: 73 FKIADTPQKMLDLGLDGVVEHIKTIGLFRNKAKNVIKMSQLLVDEYDGVVPNSRAALQSL 132
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK ANV+L+M +G P VDTHIFR+ NR G+APGK + VE+++ IP Q +
Sbjct: 133 PGVGRKTANVVLNMWWGQPAQAVDTHIFRLGNRSGIAPGKNVDAVERAIEDNIPADFQLH 192
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH+W++LHGRY+C ARKP+C++C I +LC+
Sbjct: 193 AHHWMILHGRYICIARKPKCKACHIRDLCQF 223
>gi|194016957|ref|ZP_03055570.1| endonuclease III [Bacillus pumilus ATCC 7061]
gi|194011563|gb|EDW21132.1| endonuclease III [Bacillus pumilus ATCC 7061]
Length = 220
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 142/210 (67%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K++ E + +P + EL + N F L++AV LSAQ TDV VNK TK LF+
Sbjct: 1 MLSKKQINECLDIIGDMFPEAECELVHSNPFELVIAVALSAQCTDVLVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI LS +LI E+D ++P+ + L +LPG+GR
Sbjct: 61 TPEDYLSVPLEELQQDIRSIGLYRNKAKNIQKLSKMLIEEYDGEVPKDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VEQ+L++ +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPEEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA++PQC+SC + ++C+ ++
Sbjct: 181 LIFFGRYHCKAQRPQCESCPLLDMCREGQK 210
>gi|325110554|ref|YP_004271622.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Planctomyces brasiliensis DSM 5305]
gi|324970822|gb|ADY61600.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Planctomyces brasiliensis DSM 5305]
Length = 237
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ +I L +P + L + N + L+ A +LSAQ TD VN+ T LF P
Sbjct: 23 KQRTAKILRLLKKSYPDVECALIHHNAYELLAATILSAQCTDARVNQTTPDLFAAYPDPF 82
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ IR++G +R K++++I ++ L+ D ++P+ LE L +LPG+GRK A
Sbjct: 83 ALAKAELADVEQIIRSLGFFRSKAKSLIGMAQGLVERHDGEVPKDLEALCKLPGVGRKTA 142
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L + + P+ + VDTH+ RIS +GL P K+EQ L++ +P K + + L+
Sbjct: 143 NVLLGVWYNHPSGVVVDTHVKRISRLLGLTEANQPEKIEQELMQKLPRKEWIDFSHRLIY 202
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR +C AR+P+C C + +C R+
Sbjct: 203 HGRQICIARRPKCCECRLLAVCPRV 227
>gi|149007053|ref|ZP_01830722.1| heat shock protein HtpX [Streptococcus pneumoniae SP18-BS74]
gi|147761357|gb|EDK68323.1| heat shock protein HtpX [Streptococcus pneumoniae SP18-BS74]
Length = 209
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ +AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKQVMDILPPEQWLDAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|332653386|ref|ZP_08419131.1| endonuclease III [Ruminococcaceae bacterium D16]
gi|332518532|gb|EGJ48135.1| endonuclease III [Ruminococcaceae bacterium D16]
Length = 219
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E+ I +P L Y + L+ +V L+AQ TD VNK T LF
Sbjct: 1 MKSQQEVRAIVDALKELYPDGICSLDYEKDYELLFSVRLAAQCTDERVNKVTPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + +++ YI + G +R K+ +I+ S +++ E+ K+P T+E L +LPG+GR
Sbjct: 61 TLEALANADISEVEQYIHSTGFFRAKARDIVLASQMILAEYGGKVPGTMEDLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGV-DTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHY 196
K AN++L F +P + V DTH RI+ +GL G K P KVE L +++PP+ + +
Sbjct: 121 KTANLMLGDVFHVPGVVVADTHCIRITGLLGLTDGSKDPTKVEMQLRKVLPPEESNDFCH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LVLHGR VC AR+PQC C++ C +
Sbjct: 181 RLVLHGRAVCIARRPQCGECVLRPWCDYFTK 211
>gi|163850028|ref|YP_001638071.1| endonuclease III [Methylobacterium extorquens PA1]
gi|163661633|gb|ABY29000.1| endonuclease III [Methylobacterium extorquens PA1]
Length = 270
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 143/198 (72%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF IADTPQKML +
Sbjct: 59 EIFSRLRAADPEPRSELEYLNPYTLLVAVVLSAQATDKSVNLATAPLFTIADTPQKMLDL 118
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE++++++IRTIG++ K++N+I+LS IL+ +P E L LPG+G K A+V+L+
Sbjct: 119 GEERVRHFIRTIGLFNTKAKNVIALSRILLERHGGAVPCEAEALEVLPGVGTKTASVVLN 178
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG+P I VDTHIFR+SNRI L T +KV+ L +P + NAH+WL+LHGRY+C
Sbjct: 179 VAFGVPRIAVDTHIFRVSNRIPLFSAATTDKVQAGLEARVPEPFRLNAHHWLILHGRYIC 238
Query: 207 KARKPQCQSCIISNLCKR 224
KAR+P+C C I++LC+
Sbjct: 239 KARRPECPRCSIADLCRY 256
>gi|162660787|gb|EDQ48537.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 103/203 (50%), Positives = 142/203 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E F PSP+ EL Y N F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MKTTSIEPFFATLKAANPSPQTELEYTNVFELLSAVLLSAQATDVGVNKATRKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G + L+ YI+TIG+YR K++++ IL+ ++P+T E L LPG+GRK
Sbjct: 61 PQAILDLGLEGLEGYIKTIGLYRSKAKHLTQTCQILVERHGGQVPRTREELEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VDTHIFR+SNR GLAPGKTP VE L++ +PP + ++H+WL+
Sbjct: 121 TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVEMQLMKRVPPAYAVDSHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
L GRYVC+ARKP C C+++ C
Sbjct: 181 LLGRYVCQARKPLCWECVVAPYC 203
>gi|120610247|ref|YP_969925.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Acidovorax citrulli AAC00-1]
gi|120588711|gb|ABM32151.1| DNA-(apurinic or apyrimidinic site) lyase [Acidovorax citrulli
AAC00-1]
Length = 226
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 100/202 (49%), Positives = 138/202 (68%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++E F P P EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A TPQ
Sbjct: 18 AQIEPFFAALKAANPQPNTELEYTTVFELLAAVLLSAQATDVGVNKATRKLFPVAGTPQA 77
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+L +G + L+ YI+TIG+YR K+ +++ IL+ +P+T E L LPG+GRK AN
Sbjct: 78 ILDLGLEGLEGYIKTIGLYRSKARHLMETCRILVERHGGTVPRTREELEALPGVGRKTAN 137
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L++AFG PT+ VDTHIFR+SNR GLAPGK P VE LL+ +P ++ ++H+WL+L G
Sbjct: 138 VVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLAVEMQLLKRVPAEYAVDSHHWLILLG 197
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RYVC+ARKP+C C+++ C
Sbjct: 198 RYVCQARKPRCWECVVAPWCDY 219
>gi|284050652|ref|ZP_06380862.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Arthrospira platensis str. Paraca]
gi|291568711|dbj|BAI90983.1| endonuclease III [Arthrospira platensis NIES-39]
Length = 217
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+ +P L Y L+VA +LSAQ TD VN+ T LF+ M
Sbjct: 12 RALEVLVRLKRLYPDAACTLNYETPLQLLVATILSAQCTDERVNQVTPALFKRFPDAFSM 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++L+ +R+ G YR K+ +I S I+ +F ++P+ +E L LPG+ RK ANV
Sbjct: 72 GTADLQELETLVRSTGFYRNKARHIKESSRIITEKFGGEVPKRMEQLLELPGVARKTANV 131
Query: 144 ILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+++ A+GI + VDTH+ R+S R+GL + P ++E+ L++++P N L+ HG
Sbjct: 132 VMANAYGINMGVTVDTHVRRLSQRLGLTQHQDPVRIERDLMQVLPQPDWENWSIRLIYHG 191
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
R +C AR P C +C +S+LC +
Sbjct: 192 REICTARNPACYNCQLSDLCPSAQ 215
>gi|302870344|ref|YP_003838981.1| endonuclease III [Micromonospora aurantiaca ATCC 27029]
gi|315503379|ref|YP_004082266.1| endonuclease iii [Micromonospora sp. L5]
gi|302573203|gb|ADL49405.1| endonuclease III [Micromonospora aurantiaca ATCC 27029]
gi|315409998|gb|ADU08115.1| endonuclease III [Micromonospora sp. L5]
Length = 259
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 103/194 (53%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ P EL + N L VA +LSAQ TD VN+ T LF T A +L
Sbjct: 23 LTETHPDAHCELDHANALELAVATILSAQCTDKKVNEVTPKLFARYRTAADYAAADRAEL 82
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G YR K+ ++I+L L +D ++P L+ L LPGIGRK ANVIL AFG+
Sbjct: 83 EELIRPTGFYRNKTSSLINLGRALCERYDGEVPGRLDDLVTLPGIGRKTANVILGNAFGV 142
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ +R L P K+E ++ + P + + ++ HGR VC ARKP
Sbjct: 143 PGITVDTHFQRLVHRWQLTTETDPVKIEHAIGALYPKRDWTMLSHRVIFHGRRVCHARKP 202
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 203 ACGACTLAKLCPAY 216
>gi|229544034|ref|ZP_04433093.1| endonuclease III [Bacillus coagulans 36D1]
gi|229325173|gb|EEN90849.1| endonuclease III [Bacillus coagulans 36D1]
Length = 219
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/210 (42%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ +P + EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLTKKQIRHCLETMGEMFPDARCELNHSNPFELLIAVTLSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +A+ ++LQ IR+IG+YR K++NI L +LI E+ ++PQT E L +LPG+GR
Sbjct: 61 TPDDYIAVPLEELQQDIRSIGLYRNKAKNIQKLCRMLIEEYGREVPQTREELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AFGIP I VDTH+ R+S R+G + +VEQ+L++ +P + H+
Sbjct: 121 KTANVVLSVAFGIPAIAVDTHVERVSKRLGFCRYKDSVLEVEQTLMKKVPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEICPLLDLCREGKK 210
>gi|329113633|ref|ZP_08242411.1| Endonuclease III [Acetobacter pomorum DM001]
gi|326697040|gb|EGE48703.1| Endonuclease III [Acetobacter pomorum DM001]
Length = 269
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 143/223 (64%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCL---YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+ K++ + Q + P TP+E+ S WP K EL Y FTL+VAV+LSA
Sbjct: 28 AKKQAPANQSSGPAAIAPRDMTPQEIYSFLKDLSQAWPDAKTELLYTTPFTLLVAVVLSA 87
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+TD +VN+ T LF+ A TP M+ +GE+++ IRTIG++R K++N++ LS L+ +
Sbjct: 88 QATDASVNRVTPALFKAAPTPAAMVELGEEEVGKLIRTIGLWRNKAKNVVELSRQLVADH 147
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
K+P T E L +L G+GRK ANV+L++AF PT+ VDTH+FR++NR GL GKT VE
Sbjct: 148 QGKLPGTREELEKLAGVGRKTANVVLNVAFHKPTVPVDTHVFRLANRSGLGRGKTVEAVE 207
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++L IP + +H+W++L GRYVCKARKP+C C C
Sbjct: 208 KALETRIPLEMIQPSHHWMILQGRYVCKARKPECWRCNAKTPC 250
>gi|218528631|ref|YP_002419447.1| endonuclease III [Methylobacterium chloromethanicum CM4]
gi|218520934|gb|ACK81519.1| endonuclease III [Methylobacterium chloromethanicum CM4]
Length = 233
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 143/198 (72%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF IADTPQKML +
Sbjct: 22 EIFSRLRAADPEPRSELEYLNPYTLLVAVVLSAQATDKSVNLATAPLFAIADTPQKMLDL 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE++++++IRTIG++ K++N+I+LS IL+ +P E L LPG+G K A+V+L+
Sbjct: 82 GEERVRHFIRTIGLFNTKAKNVIALSRILLERHGGAVPCEAEALEVLPGVGTKTASVVLN 141
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG+P I VDTHIFR+SNRI L T +KV+ L +P + NAH+WL+LHGRY+C
Sbjct: 142 VAFGVPRIAVDTHIFRVSNRIPLFSAATTDKVQAGLEARVPEPFRLNAHHWLILHGRYIC 201
Query: 207 KARKPQCQSCIISNLCKR 224
KAR+P+C C I++LC+
Sbjct: 202 KARRPECPRCSIADLCRY 219
>gi|56420704|ref|YP_148022.1| endonuclease III [Geobacillus kaustophilus HTA426]
gi|261417992|ref|YP_003251674.1| endonuclease III [Geobacillus sp. Y412MC61]
gi|319767195|ref|YP_004132696.1| endonuclease III [Geobacillus sp. Y412MC52]
gi|56380546|dbj|BAD76454.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Geobacillus kaustophilus HTA426]
gi|261374449|gb|ACX77192.1| endonuclease III [Geobacillus sp. Y412MC61]
gi|317112061|gb|ADU94553.1| endonuclease III [Geobacillus sp. Y412MC52]
Length = 223
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +++ + +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 1 MLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +A+ ++L+ IR+IG+YR K+ NI L +LI++++ ++P+ + L +LPG+GR
Sbjct: 61 TPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G + +VE++L++IIP + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC SC + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQSPQCPSCPLLHLCREGKK 210
>gi|224283614|ref|ZP_03646936.1| Putative EndoIII-related endonuclease [Bifidobacterium bifidum
NCIMB 41171]
Length = 208
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 5/201 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L +P PK L + + L++A +LSAQ+TD VN T LF + A
Sbjct: 5 YALLVEAFPHPKCALDFTSPLQLLIATVLSAQTTDKRVNTVTPELFSRFPDAASLAAANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +++ I +G YR K+++++ L+ +L + F ++P T++ L LPG+GRK ANV+L A
Sbjct: 65 QDVEDIIHPLGFYRSKTKHLLGLAVVLRDRFGGEVPDTMDSLVTLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VDTH+ R+ + P +E+ + P + + L+LHGR
Sbjct: 125 FGVPGFPVDTHVIRVTGRLRWRGDWNSSSPDPVHIEREICSYFEPSQWTDLSHRLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLCKR 224
C ARKP C C + + C
Sbjct: 185 ATCHARKPDCAVCPLHDTCPS 205
>gi|308274576|emb|CBX31175.1| Endonuclease III [uncultured Desulfobacterium sp.]
Length = 244
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 122/198 (61%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +LK+P K +L Y F L++A +LSAQ TD VN TK LFE TP +
Sbjct: 45 KILNLKYPEVKTQLNYNTPFELLIATILSAQCTDKQVNIVTKKLFEKLKTPYDFAEAPIE 104
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +I++ G +R K++NI + S +I + + ++P ++E LT L G+GRK ANV+L AF
Sbjct: 105 LIEKFIKSTGFFRNKAKNIKNCSKNIIEKHNGEVPDSIEELTGLAGVGRKTANVVLGAAF 164
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I VDTH+ RIS R+ L+ K P ++E L++IIP + + L+ GR VCKAR
Sbjct: 165 GIPGIVVDTHVARISQRLSLSDNKDPVRIEFDLMKIIPKREWNDFCLRLIYFGREVCKAR 224
Query: 210 KPQCQSCIISNLCKRIKQ 227
KP C SC ++NLC +
Sbjct: 225 KPLCPSCPLTNLCDYQHK 242
>gi|58698597|ref|ZP_00373495.1| endonuclease III [Wolbachia endosymbiont of Drosophila ananassae]
gi|58534893|gb|EAL58994.1| endonuclease III [Wolbachia endosymbiont of Drosophila ananassae]
Length = 205
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 147/203 (72%), Gaps = 4/203 (1%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
IF F P+PK EL Y N FTL+VA++LSA++TD++VNK TK LF I DTP+KML+ G
Sbjct: 2 IFEKFQQSNPAPKIELNYTNDFTLLVAIVLSARTTDISVNKITKELFSITDTPEKMLSFG 61
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +L+ I +IG+Y K++NII LS ILI +++K+P + L LPG+GRK ANV L+
Sbjct: 62 QSELRKCISSIGLYNSKAKNIIGLSKILIERYNSKVPTDFDDLVSLPGVGRKSANVFLNS 121
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
GIPT+ VDTH+FR+SNRIGL K K EQSLL ++P K+ AH+WLVLHGRYVCK
Sbjct: 122 GLGIPTLAVDTHVFRVSNRIGLVKEKDVFKTEQSLLNVVPKKYLLYAHHWLVLHGRYVCK 181
Query: 208 ARKPQCQSCIISNL----CKRIK 226
A+KP C++CII +L CKR K
Sbjct: 182 AQKPSCETCIIHDLCEFECKRYK 204
>gi|210631996|ref|ZP_03297161.1| hypothetical protein COLSTE_01054 [Collinsella stercoris DSM 13279]
gi|210159798|gb|EEA90769.1| hypothetical protein COLSTE_01054 [Collinsella stercoris DSM 13279]
Length = 220
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 123/210 (58%), Gaps = 4/210 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E + ++ + L + F L++AVLLSAQ+TD VNK T LF TP
Sbjct: 9 KRERAIETCRRLNERYGPVECFLDHETPFRLVIAVLLSAQTTDAQVNKVTPELFRRWPTP 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M ++L I+++G Y+ K+++ I + +++ ++ +P ++ L +LPG+GRK
Sbjct: 69 EAMAGATYEELSGVIKSLGFYKTKAKHCIECAQMIVADYGGVVPADMKELVKLPGVGRKT 128
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN++L++ +GI I VDTH+ RI++R+ L K P K EQ LL+I+P ++ + ++
Sbjct: 129 ANIVLNVGYGIVDGIAVDTHVNRIAHRLKLSPKTHEKEPLKTEQDLLKILPREYWNDVNH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GR +C ARKP C C ++++C K
Sbjct: 189 QWIMLGREICDARKPLCGECPLADICPSAK 218
>gi|73662601|ref|YP_301382.1| endonuclease [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72495116|dbj|BAE18437.1| putative endonuclease [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 219
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P+ + EL + N F L +AVLLSAQ+TDV+VNK TK LF+
Sbjct: 1 MISNKKALEMVDVIANMFPNAECELKHDNPFELTIAVLLSAQTTDVSVNKLTKDLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +L+N +RTIG+YR K++NI L L+++FD +IP T L L G+GR
Sbjct: 61 TPEDYLNVDISELENDLRTIGLYRNKAKNIQKLCRSLLDQFDGEIPHTHAELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ RIS R+G+ +VE L ++P + H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERISKRLGICRWKDNVRQVEDKLCHVVPRERWNKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C AR P+C C + N C+ ++
Sbjct: 181 LIFFGRYHCLARSPKCDVCPLFNDCREGQK 210
>gi|254456973|ref|ZP_05070401.1| endonuclease III [Campylobacterales bacterium GD 1]
gi|207085765|gb|EDZ63049.1| endonuclease III [Campylobacterales bacterium GD 1]
Length = 213
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE+ EI LF ++ EL Y N + L+VAV LSAQ TD VN T LFEI +P
Sbjct: 5 TKKEILEIHELFIQRYSDAVTELEYKNAYELVVAVALSAQCTDKRVNIITPKLFEIYPSP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ ++ I + + K++NII+++ +++ ++ +IP + L L G+G+K
Sbjct: 65 KELADANIDDVKGLINSCSFFNNKAKNIIAMARRVVDVYEGEIPMREKDLITLGGVGQKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV++ G + VDTH+FR+S+R+GL+ KT K E +L++ + + H +VL
Sbjct: 125 ANVVMIEYTGANLMAVDTHVFRVSHRLGLSDDKTALKTEATLVKKF-KNNLHALHQGMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
GRY+C A+ P+C C ++ CK
Sbjct: 184 FGRYICTAKNPKCDECFLTEYCK 206
>gi|312135267|ref|YP_004002605.1| endonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775318|gb|ADQ04805.1| endonuclease III [Caldicellulosiruptor owensensis OL]
Length = 211
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 122/208 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + +P PK L Y + L++A +L+AQSTD VNK T LF+
Sbjct: 1 MTKKEKVNYVIKELLKIYPQPKCTLNYDKPYELLIATILAAQSTDECVNKITAELFKKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +L+N I+ +G Y+ K+++I + IL+ +++ +P T+E L +L G+GR
Sbjct: 61 TLESFAEADLSELENDIKPVGFYKNKAKSIKETAKILVEKYNGTLPTTIEELVKLKGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI++ +GIP+I VDTH R+SNR+GL K K+E L I+ P+ +
Sbjct: 121 KTANVIMANIYGIPSIIVDTHCMRLSNRLGLVNSKDATKIEFELRDIVEPQLYTIFSNLM 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V HGR VCKA KP+C+ C I ++CK K
Sbjct: 181 VYHGRAVCKAIKPKCEVCTIKDVCKYFK 208
>gi|114764069|ref|ZP_01443308.1| endonuclease III [Pelagibaca bermudensis HTCC2601]
gi|114543427|gb|EAU46442.1| endonuclease III [Roseovarius sp. HTCC2601]
Length = 214
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 143/200 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF IADTP+KML
Sbjct: 10 LREIFTRFHEAEPEPKGELDHVNAYTLVVAVALSAQATDAGVNKATRELFRIADTPEKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ + +I+TIG+YR K++N+I LS IL ++ ++P + L LPG+GRK ANV+
Sbjct: 70 ALGEEGVIEHIKTIGLYRNKAKNVIKLSKILHEQYGGEVPCSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK E+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWHYPAQAVDTHIFRVGNRSGICPGKDVVATERAIEDNIPVDFQQHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
C ARKP+CQ+C+I +LC+
Sbjct: 190 TCVARKPKCQACLIRDLCQF 209
>gi|303228390|ref|ZP_07315223.1| endonuclease III [Veillonella atypica ACS-134-V-Col7a]
gi|302516892|gb|EFL58801.1| endonuclease III [Veillonella atypica ACS-134-V-Col7a]
Length = 211
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF +
Sbjct: 1 MRVTKAIKAEQLALLEEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPVL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KML +G KL+ I+ G+Y+ K++N+I+ HIL+ ++ ++P+ + L LPG+G
Sbjct: 61 NHPAKMLEVGVTKLETLIKDCGLYKSKAKNLIATCHILVEQYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR++NR+ L KTP ++EQ L + IP + AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVANRLKLGIAKTPEEMEQKLQKAIPKEKWSAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR VCKARKP C++C + +LC +
Sbjct: 181 LIYHGRRVCKARKPLCETCFLHHLCPSAGK 210
>gi|241767282|ref|ZP_04765015.1| endonuclease III [Acidovorax delafieldii 2AN]
gi|241362039|gb|EER58184.1| endonuclease III [Acidovorax delafieldii 2AN]
Length = 215
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 101/200 (50%), Positives = 138/200 (69%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E F P P EL Y F L+ AVLLSAQ+TDV VNKAT+ LF +A TPQ +L
Sbjct: 6 IEPFFATLRAANPQPNTELEYTTVFELLAAVLLSAQATDVGVNKATRRLFPVAGTPQAIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G + L+ YI+TIG+Y+ K+ +++ IL+ + +P+T E L LPG+GRK ANV+
Sbjct: 66 DLGLEGLEGYIKTIGLYKSKARHLLETCRILVEQHGGVVPRTREALEALPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++AFG PT+ VDTHIFR+SNR GLAPGK P VE LL+ +PP + +AH+WL+L GRY
Sbjct: 126 LNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLAVEVQLLQRVPPAYAVDAHHWLILLGRY 185
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC+ARKP+C C+++ C
Sbjct: 186 VCQARKPRCWECVVAPYCDY 205
>gi|229816038|ref|ZP_04446359.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
gi|229808352|gb|EEP44133.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
Length = 220
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E + ++ + L + F L++AVLLSAQ+TD VNK T LF TP
Sbjct: 9 KRERAIETCRRLNERYGPVECFLDHETPFRLVIAVLLSAQTTDAQVNKVTPELFRRWPTP 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++M ++L + I+++G Y+ K+++ I+ + +++ ++ +P ++ L +LPG+GRK
Sbjct: 69 EQMAGATYEELSDVIKSLGFYKTKAKHCIACAQMIVADYGGVVPNEMKELVKLPGVGRKT 128
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN++L++ +GI I VDTH+ RI++R+ L K P K EQ LL+I+P ++ + ++
Sbjct: 129 ANIVLNVGYGIVDGIAVDTHVNRIAHRLKLSPKTHEKEPLKTEQDLLKILPREYWNDVNH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GR +C ARKP C C ++++C K
Sbjct: 189 QWIMLGREICDARKPLCGECPLADICPSAK 218
>gi|119505662|ref|ZP_01627732.1| endonuclease III [marine gamma proteobacterium HTCC2080]
gi|119458474|gb|EAW39579.1| endonuclease III [marine gamma proteobacterium HTCC2080]
Length = 227
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 118/217 (54%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
Q + L + + I + +P P L + + FTL++AVLLSAQ TD VN+ T
Sbjct: 3 QKQNSPRNLMKEERVAFIDKRLAQLYPKPPVPLDHQDPFTLLIAVLLSAQCTDERVNQVT 62
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
LF ADTP+ M + + +++ IR G+ +KS+ I LS +LI + D+++P+T L
Sbjct: 63 PSLFAAADTPETMAELSVEHIRSIIRPCGLSPQKSKAIKGLSQLLITQHDSQVPRTFAEL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+G K A V+++ AFG P VDTHI R++ R GL GK + E+ L R+
Sbjct: 123 EALPGVGHKTAGVVMAQAFGHPAFPVDTHIHRLAQRWGLTRGKNVVETERDLKRVFQESR 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H ++ +GR C AR + C I C +++
Sbjct: 183 WNDLHLQIIFYGREFCTARGCDGRVCEICTTCYPLRK 219
>gi|329891220|ref|ZP_08269563.1| endonuclease III [Brevundimonas diminuta ATCC 11568]
gi|328846521|gb|EGF96085.1| endonuclease III [Brevundimonas diminuta ATCC 11568]
Length = 207
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 141/200 (70%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EEIF S P PK EL +VN +TL+VAV LSAQ+TDV VNKATK LF +ADTPQKML
Sbjct: 1 MEEIFVRLSGVMPDPKTELDFVNPYTLVVAVALSAQATDVGVNKATKALFAVADTPQKML 60
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ L I +IG+YR K++N+I+ + +L+ + ++P L LPG+GRK A+V+
Sbjct: 61 ALGEEGLIPLIASIGLYRTKAKNVIAAARMLVEKHGGEVPLNRADLQALPGVGRKTASVV 120
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ P I VDTH+FR+S+R+GLA TP+KVE L +++P AH+WL+LHGRY
Sbjct: 121 LNELGIEPAIAVDTHVFRVSHRLGLANAATPDKVEVQLHQVVPEAWLPKAHHWLILHGRY 180
Query: 205 VCKARKPQCQSCIISNLCKR 224
C A++P+C C+IS+LC
Sbjct: 181 TCLAQRPKCPGCVISDLCPS 200
>gi|227549682|ref|ZP_03979731.1| endonuclease III [Corynebacterium lipophiloflavum DSM 44291]
gi|227078259|gb|EEI16222.1| endonuclease III [Corynebacterium lipophiloflavum DSM 44291]
Length = 227
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 104/193 (53%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+P EL Y N L+VA +LSAQ+TDV VN+ T LF T + + +++
Sbjct: 1 MFPDAHAELDYTNPLELLVATVLSAQTTDVRVNQVTPELFARFPTASAYASAQQDQVEEI 60
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
IR G YR K+ N+I L L+ F +P +LE L LPG+GRK A+V+ AFG+P +
Sbjct: 61 IRPTGFYRAKAANLIGLGRALVTNFGGGVPTSLEDLVTLPGVGRKTAHVVRGNAFGMPGL 120
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ +R+ L K P +E + II K + ++ HGR VC AR P C
Sbjct: 121 TVDTHFQRLVHRLKLTEEKDPVAIEHVIGAIIEKKEWTMFSHRIIFHGRRVCHARTPACG 180
Query: 215 SCIISNLCKRIKQ 227
+C ++ C +
Sbjct: 181 ACPLAFDCPSFGE 193
>gi|225574096|ref|ZP_03782707.1| hypothetical protein RUMHYD_02161 [Blautia hydrogenotrophica DSM
10507]
gi|225038696|gb|EEG48942.1| hypothetical protein RUMHYD_02161 [Blautia hydrogenotrophica DSM
10507]
Length = 210
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
K +EI L K+ K L Y N L++A +LSAQ TD VN TK LF+ D
Sbjct: 1 MATKRTKEILALLDEKYTREYKCYLNYENPGQLLIATMLSAQCTDARVNVVTKDLFQKYD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T +K ++L+ I+ G Y K++NII + L+NE+ ++P LE L LPG+GR
Sbjct: 61 TMEKFAQADLRELEQDIKPTGFYHNKAKNIIGCAQRLVNEYGGEVPSDLEALVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI F P++ VDTH+ RIS R+GL + P K+E+ L++++P +H + +
Sbjct: 121 KTANVIRGNIFHEPSVVVDTHVKRISRRLGLTREEDPVKIEKDLMKVLPREHWILYNIQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GR +C AR P+C+ C ++ C K+
Sbjct: 181 ITFGRQICFARSPKCEECFLTKYCSEYKK 209
>gi|22299184|ref|NP_682431.1| endonuclease III [Thermosynechococcus elongatus BP-1]
gi|22295366|dbj|BAC09193.1| endonuclease III [Thermosynechococcus elongatus BP-1]
Length = 222
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI +P L + N L+VA +LSAQ TD VN+ T LF
Sbjct: 10 KQQRALEILTRLKRLYPHATCSLNFENPLQLLVATILSAQCTDERVNQVTPALFARYRDA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A +L+ YI++ G YR K+ +I ++ + ++P+ +E L LPG+ RK
Sbjct: 70 EDFAAADLAELEQYIKSTGFYRNKARHIQGACRRIVEVYGGQVPKVMEDLLSLPGVARKT 129
Query: 141 ANVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ +GI + VDTH+ R+S R+GL P K+E+ L+R+IP N L+
Sbjct: 130 ANVVLAHGYGILGGVTVDTHVKRLSRRLGLTQETDPVKIERDLMRLIPQPDWENWSIRLI 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR VC+AR+PQC+SC + +LC ++
Sbjct: 190 YHGRAVCQARQPQCESCELIDLCATGRK 217
>gi|269798164|ref|YP_003312064.1| endonuclease III [Veillonella parvula DSM 2008]
gi|282850393|ref|ZP_06259772.1| endonuclease III [Veillonella parvula ATCC 17745]
gi|269094793|gb|ACZ24784.1| endonuclease III [Veillonella parvula DSM 2008]
gi|282579886|gb|EFB85290.1| endonuclease III [Veillonella parvula ATCC 17745]
Length = 211
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF
Sbjct: 1 MRVTKAIKAEQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KML IG KL+ I+ G+Y+ K++N+I+ IL++ + ++P+ + L LPG+G
Sbjct: 61 NHPAKMLEIGVAKLETLIKDCGLYKSKAKNLIATCQILVDRYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR+SNR+ L KTP ++EQ L + IP K AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMEQKLQKAIPKKDWAAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR +CKARKP C C +++LC +
Sbjct: 181 LIYHGRRLCKARKPLCNECFLNHLCPSAGK 210
>gi|320457254|dbj|BAJ67875.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 217
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 5/202 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + P+P L++ N L++A +LSAQ+TD VN T LF T + + A
Sbjct: 5 YDILRQVIPAPACALHFSNPLELLIATVLSAQTTDKRVNTVTPELFATFPTARDLAAANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++++ I +G YR K++++I L+ L F +P+T++GLT LPG+GRK ANV+L A
Sbjct: 65 AQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTMDGLTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F IP VDTH+ R+ + P K+E+ + PP+ N + L+L GR
Sbjct: 125 FDIPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITACFPPEEWTNLSHRLILFGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C AR P C +C +S+ C
Sbjct: 185 ATCHARTPDCANCPLSDTCPSY 206
>gi|238754994|ref|ZP_04616343.1| Endonuclease III [Yersinia ruckeri ATCC 29473]
gi|238706853|gb|EEP99221.1| Endonuclease III [Yersinia ruckeri ATCC 29473]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 138/196 (70%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+TPQ ML +G L
Sbjct: 1 MRDNNPHPTTELVFNSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPQAMLNLGVDGL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
++YI+TIG++ K+EN+I IL+ ++P+ L LPG+GRK ANV+L+ AFG
Sbjct: 61 KSYIKTIGLFNTKAENVIKTCRILLETHQGEVPEDRAALEALPGVGRKTANVVLNTAFGW 120
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
PTI VDTHIFR+ NR APGK ++VE+ LL+++P + + + H+WL+LHGRY C ARKP
Sbjct: 121 PTIAVDTHIFRVCNRTHFAPGKNVDQVEEKLLKVVPSEFKQDCHHWLILHGRYTCIARKP 180
Query: 212 QCQSCIISNLCKRIKQ 227
+C SCII +LC+ ++
Sbjct: 181 RCGSCIIEDLCEFKEK 196
>gi|126178987|ref|YP_001046952.1| endonuclease III [Methanoculleus marisnigri JR1]
gi|125861781|gb|ABN56970.1| DNA-(apurinic or apyrimidinic site) lyase [Methanoculleus
marisnigri JR1]
Length = 218
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 4/205 (1%)
Query: 27 EIFYLFSLKWPSP---KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E++ +P + L + N F ++ +LSAQ+TD VN LF TP+ +
Sbjct: 8 EVYRRLLEHYPVVDGRRHFLEFHNPFETLILTILSAQTTDRAVNAVRDDLFSRYPTPEAL 67
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++++ IRTIG + K+ I+ + L+ EF ++P+T+E L LPG+GRK AN+
Sbjct: 68 ARAEPEEVEPLIRTIGFHHAKARYIVGAARKLVAEFGGEVPRTMEELQTLPGVGRKTANI 127
Query: 144 ILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+LS AF I I VDTH+ R+S R+G P+ +E+ L+ + P + + +Y L+ HG
Sbjct: 128 VLSHAFDINVGIAVDTHVRRVSKRLGFTDSTNPDIIERDLVALFPEEVWRDINYLLIRHG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R VC A+ P+ + C+++ LC+ ++
Sbjct: 188 RAVCTAKNPKHEVCVVAGLCRYYRE 212
>gi|23099212|ref|NP_692678.1| endonuclease III [Oceanobacillus iheyensis HTE831]
gi|22777440|dbj|BAC13713.1| endonuclease III (DNA repair) [Oceanobacillus iheyensis HTE831]
Length = 216
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++ + + + +P KGEL + N F L++AVLLSAQ TD VNK T LF+
Sbjct: 1 MLNQKQIRQCLDIMAEMYPDAKGELEHSNAFELVIAVLLSAQCTDKLVNKVTADLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ +L+N IR+IG+YR K++NI L +L++E++ +IP + E L +L G+GR
Sbjct: 61 TPEDYLSVELSELENDIRSIGLYRSKAKNIQKLCQMLLDEYNGEIPSSKEELVKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AF P+I VDTH+ R+S R+G+ + +VE +L++ +P H+
Sbjct: 121 KTANVVASIAFNEPSIAVDTHVERVSKRLGICKWKDSVLEVENTLMKKVPRDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR PQC C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPQCPECPLLELCREGKK 210
>gi|312796967|ref|YP_004029889.1| Endonuclease III [Burkholderia rhizoxinica HKI 454]
gi|312168742|emb|CBW75745.1| Endonuclease III (EC 4.2.99.18) [Burkholderia rhizoxinica HKI 454]
Length = 240
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 97/208 (46%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I+ P P EL Y F L++AV+LSAQ+TD++VNKA + +F +A+T
Sbjct: 27 MNAQKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDISVNKAMRQMFPVANT 86
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +LA+GE + YI+TIG+YR K++N+I+ IL+++ ++P E L LPG+GRK
Sbjct: 87 PKTILALGEDGVAQYIKTIGLYRTKAKNVIATCRILLDKHHGEVPADREALEALPGVGRK 146
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR++NR GLAPGK VE +L ++ P + +++AH+WL+
Sbjct: 147 TANVVLNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEVALEKLTPVEFRHDAHHWLI 206
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+AR P+C C I LC+ +
Sbjct: 207 LHGRYVCRARLPECWHCAIEPLCEFKSK 234
>gi|239636874|ref|ZP_04677873.1| endonuclease III [Staphylococcus warneri L37603]
gi|239597548|gb|EEQ80046.1| endonuclease III [Staphylococcus warneri L37603]
Length = 219
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ E+ + + +P + EL + N F L +AVLLSAQ TD+ VNK TK LF
Sbjct: 1 MISKKKSLEMIDVIADMFPDAECELRHDNAFELTIAVLLSAQCTDILVNKVTKSLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN I++IG+YR K++NI L L+++FD +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIKSIGLYRNKAKNIKKLCQSLLDKFDGEIPQTHQELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP + +H+
Sbjct: 121 KTANVVMSVAFNEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPKERWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + N C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCDICPLFNDCREGQK 210
>gi|307127130|ref|YP_003879161.1| endonuclease III [Streptococcus pneumoniae 670-6B]
gi|306484192|gb|ADM91061.1| endonuclease III [Streptococcus pneumoniae 670-6B]
gi|332074613|gb|EGI85087.1| endonuclease III [Streptococcus pneumoniae GA17545]
Length = 209
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ +AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLDAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|332705408|ref|ZP_08425486.1| DNA lyase/endonuclease III [Lyngbya majuscula 3L]
gi|332355768|gb|EGJ35230.1| DNA lyase/endonuclease III [Lyngbya majuscula 3L]
Length = 238
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EI +P L Y L+VA +LSAQ TD VN+ T LF
Sbjct: 10 KQQRSLEILIRLKRLYPEATCTLNYETPVQLLVATILSAQCTDERVNQVTPGLFRQFPDA 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + L+ +R+ G YR K++NI +++ E+ ++P+ ++ L +LPG+ RK
Sbjct: 70 VAIASADIEVLETLVRSTGFYRNKAKNIQGACRMIVKEYGGQVPKQMDKLLKLPGVARKT 129
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ A+GI + VDTH+ R+S R+GL K P ++E+ L+ ++P + N L+
Sbjct: 130 ANVVLAHAYGINQGVTVDTHVKRLSQRLGLTKHKDPIRIERDLMGLLPQQDWENWSIRLI 189
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
HGR +CKARKP C +C++++LC
Sbjct: 190 YHGRAICKARKPDCDACVLADLC 212
>gi|283796626|ref|ZP_06345779.1| endonuclease III [Clostridium sp. M62/1]
gi|291076049|gb|EFE13413.1| endonuclease III [Clostridium sp. M62/1]
Length = 271
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + I L ++ + L + + L++AV++SAQ TD VN T+
Sbjct: 2 KRETKAQREERVARILGLLDQEYGTEYRCYLNHETPWQLLIAVIMSAQCTDARVNLVTEK 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+ DT +K A ++L+ I +IG Y K+ NII+ L+ +F ++P+T+E LT
Sbjct: 62 LFKKYDTLEKFAAADIRELEQDIHSIGFYHSKARNIIACCRALVEQFGGRVPETMEELTS 121
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK ANVI + P+I VDTH+ RIS ++GL + P K+E +L++++P H
Sbjct: 122 LAGVGRKTANVIRGNIYNEPSIVVDTHVKRISRKLGLTKEEDPEKIEYALMKVLPRDHWI 181
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ GR +C AR P+C+ C + C
Sbjct: 182 LWNIHIITLGRTICTARNPRCRECFLRYDCPS 213
>gi|108758880|ref|YP_631351.1| endonuclease III [Myxococcus xanthus DK 1622]
gi|108462760|gb|ABF87945.1| endonuclease III [Myxococcus xanthus DK 1622]
Length = 210
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ P + EL + F L+VA +L+AQ TD VN+ T +F
Sbjct: 1 MNPAEKAALFLERLREAHPDARYELNWSTPFELLVATILAAQCTDERVNRVTATVFPKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ L+ ++ G +++K++++ ++S L+++F ++P T++ L LPG+ R
Sbjct: 61 GPQAFADADTAALEEDLKPTGFFKQKTKSVQAMSRALLDKFGGEVPHTIDELVTLPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ AF +P+ I VDTH+ R+S R+GL P +E+ L++++P +
Sbjct: 121 KTANVVLNTAFNLPSGIIVDTHVARVSQRLGLTKKDKPEAIEEDLMKLVPQEQWTFFGPA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
VLHGRY C A+KP+C CI+ ++C RI
Sbjct: 181 TVLHGRYTCTAKKPKCDDCIVKDVCPRI 208
>gi|242279970|ref|YP_002992099.1| endonuclease III [Desulfovibrio salexigens DSM 2638]
gi|242122864|gb|ACS80560.1| endonuclease III [Desulfovibrio salexigens DSM 2638]
Length = 220
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T + I+ ++P+P+ EL + N + L+VA L+AQ TDV VNK T LF+
Sbjct: 9 KTLQRATIIYDRLIKRYPNPEPELDWNNAWELMVATALAAQCTDVRVNKVTPELFKRWPG 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +M+ ++ IR+ G++R K++N+ + +++NEF ++P+T++ + +LPG+ RK
Sbjct: 69 PAEMIKADIADIEEVIRSTGLFRNKAKNLKGAAEVVMNEFGGEMPRTMKDMIKLPGVARK 128
Query: 140 GANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
AN++LS A + VDTH+ R+S R+GL PN +E+ L+ + ++ +A++ L
Sbjct: 129 TANIVLSNAMDIHEGVAVDTHVKRLSFRMGLTESTNPNVIEKDLMPLFKRENWGDANHVL 188
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
VL+GR +C AR P+C C ++++C +
Sbjct: 189 VLYGREICSARSPKCDICELNDICPK 214
>gi|327399428|ref|YP_004340297.1| endonuclease III [Hippea maritima DSM 10411]
gi|327182057|gb|AEA34238.1| endonuclease III [Hippea maritima DSM 10411]
Length = 204
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 128/201 (63%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +I +P PK EL + F L+VA++LSA+ TD NK T LFEI TP+ +
Sbjct: 1 MNQILERIKKHYPQPKLELNFSTPFELLVALVLSARCTDKLTNKITPKLFEIFPTPEALK 60
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+L I + ++ K++N+I+++ L + K+P++LE LT+LPGIGRK AN+I
Sbjct: 61 EADYDELNELISSCSMHNTKAKNLIAIAKALCEYHNCKVPESLEELTKLPGIGRKTANII 120
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
LS FGIP +GVDTH+ R++NR+G++ K + VE+ + + IP + + L+LHGR+
Sbjct: 121 LSFGFGIPAVGVDTHVLRMANRLGISDSKKADVVEEEIKQKIPKEDWIVFYSGLILHGRH 180
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKA+KP C C ++++C +I
Sbjct: 181 ICKAKKPNCDECFLNDICPKI 201
>gi|294793896|ref|ZP_06759033.1| endonuclease III [Veillonella sp. 3_1_44]
gi|294455466|gb|EFG23838.1| endonuclease III [Veillonella sp. 3_1_44]
Length = 211
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 126/199 (63%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
L + K L Y N F L+VAV+LSAQ TD VN TK LF + P KML IG
Sbjct: 12 LKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPELNHPAKMLEIGV 71
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
KL+ I+ G+Y+ K++N+I+ IL++ + ++P+ + L LPG+GRK ANV++S+
Sbjct: 72 AKLETLIKDCGLYKSKAKNLIATCQILVDRYHGEVPREFDQLVELPGVGRKTANVVVSVL 131
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
FG P I VDTH+FR+SNR+ L KTP ++EQ L + IP K AH+WL+ HGR +CKA
Sbjct: 132 FGTPAIAVDTHVFRVSNRLKLGIAKTPEEMEQKLQKAIPKKDWAAAHHWLIYHGRRLCKA 191
Query: 209 RKPQCQSCIISNLCKRIKQ 227
RKP C C +++LC +
Sbjct: 192 RKPLCNECFLNHLCPSAGK 210
>gi|283782700|ref|YP_003373454.1| endonuclease III [Gardnerella vaginalis 409-05]
gi|298253131|ref|ZP_06976923.1| EndoIII-like endonuclease [Gardnerella vaginalis 5-1]
gi|283442104|gb|ADB14570.1| endonuclease III [Gardnerella vaginalis 409-05]
gi|297532526|gb|EFH71412.1| EndoIII-like endonuclease [Gardnerella vaginalis 5-1]
Length = 224
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 21 TPKELEEIF---YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+L I+ L + P PK L + N F L++A +LSAQ+TD VN T LF I
Sbjct: 12 KQAKLARIYAEYDLLCKEIPEPKCALNFKNPFELLIATVLSAQTTDKRVNIVTPELFSIF 71
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A ++++ I +G YR K++NIISLS L+N F +P +E L LPG+G
Sbjct: 72 PNASSLAAAPVSQVESIIYPLGFYRVKAQNIISLSACLLNNFSGIVPSNMEALISLPGVG 131
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYNA 194
RK ANV+L AFG+P VDTH+ R++ R+G P +E+ + PK N
Sbjct: 132 RKTANVVLGNAFGLPGFPVDTHVIRVTGRLGWRKVQNRPNPVAIEREITAYFAPKEWTNL 191
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+LHGR +C AR P+C SC ++ C
Sbjct: 192 SHRLILHGRKICTARNPKCVSCPLNTTCPS 221
>gi|253576460|ref|ZP_04853789.1| endonuclease III [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844097|gb|EES72116.1| endonuclease III [Paenibacillus sp. oral taxon 786 str. D14]
Length = 225
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I +P + EL + N F L +AVLLSAQ TD VNK T LF+ T
Sbjct: 1 MNAADVRHILDTIGAMFPDARCELNHENAFELTIAVLLSAQCTDATVNKVTADLFKKYKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +++ ++L+ IR IG+YR K+++I SL IL+ + ++P+ E L LPG+GRK
Sbjct: 61 PEDYVSVPLEELEQDIRKIGLYRSKAKHIQSLCRILLERYGGEVPREHEKLVELPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AFG+P I VDTH+ R+S R+GLA + +VE+ L++ +P + H+ L
Sbjct: 121 TANVVVSNAFGVPAIAVDTHVERVSKRLGLAGWNDSVLEVEKKLMKRVPKEEWTLTHHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ P+C C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQAPKCDVCPLLDVCREGKK 209
>gi|221636274|ref|YP_002524150.1| Catalytic Domain Of MutyY [Thermomicrobium roseum DSM 5159]
gi|221157339|gb|ACM06457.1| Catalytic Domain Of MutyY [Thermomicrobium roseum DSM 5159]
Length = 358
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 7/230 (3%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKE-LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLL 57
+S ++ S G +P+E + + + +L + + + ++V+ ++
Sbjct: 40 LSMRREGSAAGQVAERLGQSPEEQIRAVQRRLVDWYRREARDLPWRRTRDPYRILVSEVM 99
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + T + + + ++ +G R+ + + ++
Sbjct: 100 LQQTQVERVIPYYEVFLARFPTVEALASAALAEVIAVWGGLGYNRRAV-YLWRAAREIVE 158
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+ + P L RLPG+GR A + AFG DT+I R+ R+ L P P +
Sbjct: 159 RWGGRFPGERRLLERLPGVGRYTAGAVACFAFGERVAFWDTNIARVLRRVFLGPEARPGR 218
Query: 178 VEQSL--LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
E R++P Y + L+ G +C AR+P+C+ C + LC+ +
Sbjct: 219 RELDELAERVLPLDRAYEWNQALMELGARICSARRPRCEICPLCGLCRSV 268
>gi|313114008|ref|ZP_07799563.1| putative endonuclease III [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623710|gb|EFQ07110.1| putative endonuclease III [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 243
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ +P E+ ++P L Y + + L+V+V L+AQ TD VN
Sbjct: 16 PVRKKAPEDLTAKKALALEVIDRLKKEYPDAGCTLDYDHAWQLLVSVRLAAQCTDARVNI 75
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ LF + A + ++ ++ G+ K+ +I + +L +++ ++P T E
Sbjct: 76 VVEDLFAKYPNVAALAAAEPEDIEAIVKPCGLGHSKARDISACMRVLRDKYGCQVPTTFE 135
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP 187
L LPG+GRK AN+I+ FG P I DTH R+ N+IGL G P KVE +L +I+P
Sbjct: 136 ELLALPGVGRKSANLIMGDVFGKPAIVTDTHCIRLCNKIGLVDGIKEPQKVEMALWKIVP 195
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + + V+HGR VC ARKP+C+ C + ++C+ ++
Sbjct: 196 PEEGSDLCHRFVMHGRAVCNARKPECEKCCLKDICRFARE 235
>gi|91774091|ref|YP_566783.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanococcoides burtonii DSM 6242]
gi|91713106|gb|ABE53033.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 219
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 1/212 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
SP + + I+ + ++P P+ EL Y N F L++A +LSAQ TDV VNK T L
Sbjct: 5 SPAIAMDNTANFDRIWSILKKEYPDPQPELDYSNEFELLIATILSAQCTDVQVNKVTNEL 64
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + + A L+ I + G YR KS+NI S +++++F+ K+P T+E LT
Sbjct: 65 FRKYTNVEALAAADLDVLEKEIYSTGFYRAKSKNIKRTSQLILSDFNGKVPDTMEELTTF 124
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+ RK AN++L+ FG I VDTH+ R+S ++GL P K+EQ L+++ K
Sbjct: 125 PGVARKTANIVLARGFGKVEGIAVDTHVKRVSGKLGLTENTDPKKIEQDLMKLAEQKDWE 184
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+LHGR VC A+KPQC C++S LC
Sbjct: 185 DLSMTLILHGRRVCDAKKPQCIVCLLSKLCPS 216
>gi|291528591|emb|CBK94177.1| Predicted EndoIII-related endonuclease [Eubacterium rectale M104/1]
Length = 212
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K E+ +P L Y + + L+V+V L+AQ TD VN LF+
Sbjct: 1 MTKEKLAIEVIKRLKTAYPRTDCTLEYDDAWKLLVSVRLAAQCTDARVNVVVVDLFKEYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++ +R G+ + K+ +I + +L ++F +P + L +LPG+GR
Sbjct: 61 SIEALADADVSDIEEIVRPCGLGKSKARDISACMRMLRDDFGGLVPDNMTDLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ +G P I DTH R+ NRIGL G P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVYGKPAIVTDTHCIRLCNRIGLVDGIKDPKKVEMELWKIIPPEESNDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR P C C+++++C
Sbjct: 181 LVDHGRAVCTARTTPHCDMCVLNDIC 206
>gi|297529660|ref|YP_003670935.1| endonuclease III [Geobacillus sp. C56-T3]
gi|297252912|gb|ADI26358.1| endonuclease III [Geobacillus sp. C56-T3]
Length = 223
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +++ + +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 1 MLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +A+ ++L+ IR+IG+YR K+ NI L +LI++++ ++P+ + L +LPG+GR
Sbjct: 61 TPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G + +VE++L+ IIP + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMNIIPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC SC + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQSPQCPSCPLLHLCREGKK 210
>gi|298241894|ref|ZP_06965701.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
gi|297554948|gb|EFH88812.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
Length = 232
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+P ++ I +P L + N L+VA LSAQ TD VN T LF+ +
Sbjct: 16 SPTQVHAIIAELRRLYPEAMCSLNFSNPLELMVATQLSAQCTDERVNIVTARLFKKYRSV 75
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++L+ IR+ G YR K+ N+ S +++E+ ++P+T+EGL L G+ RK
Sbjct: 76 EDYASASQEELEQDIRSTGFYRNKARNLRSACQRILSEYHGEVPRTMEGLLSLAGVARKT 135
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L AFGI VDTH+ R+S R+G P KVEQ L+RIIP + + + L+
Sbjct: 136 ANVVLGNAFGIVDGFVVDTHVGRLSRRLGWTQQTNPVKVEQELMRIIPQQDWLDLSHLLI 195
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR +C ARKP C C ++ LC
Sbjct: 196 FHGRAICDARKPLCTQCTLAVLCPS 220
>gi|317482770|ref|ZP_07941782.1| endonuclease III [Bifidobacterium sp. 12_1_47BFAA]
gi|316915805|gb|EFV37215.1| endonuclease III [Bifidobacterium sp. 12_1_47BFAA]
Length = 217
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 5/202 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + P+P L++ N L++A +LSAQ+TD VN T LF T + + A
Sbjct: 5 YDILRQVIPAPACALHFSNPLELLIATVLSAQTTDKRVNTVTPELFATYPTARDLAAANP 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++++ I +G YR K++++I L+ L F +P+T++ LT LPG+GRK ANV+L A
Sbjct: 65 AQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F IP VDTH+ R+ + P K+E+ + PP+ N + L+L GR
Sbjct: 125 FDIPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C AR P C +C +S+ C
Sbjct: 185 ATCHARTPDCANCPLSDTCPSY 206
>gi|87303146|ref|ZP_01085944.1| endonuclease III [Synechococcus sp. WH 5701]
gi|87282313|gb|EAQ74273.1| endonuclease III [Synechococcus sp. WH 5701]
Length = 228
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
I +L +P L + + L+VA +LSAQ TD VN T LFE
Sbjct: 8 RARAPLILERLALHYPHATCSLDWRTPWELLVATMLSAQCTDERVNLVTPALFERFPDAD 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
A+ +++ Y+++ G +R K+ NI++ S +LI D +P ++E L LPG+ RK A
Sbjct: 68 AAAAVSSSEVEPYVKSTGFFRNKARNIVAASQLLIERHDGAVPASMEELLELPGVARKTA 127
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NV+L+ AFGI + VDTH+ R+SNR+GL P ++E L++++P N L+
Sbjct: 128 NVVLAHAFGINAGVTVDTHVRRLSNRLGLTRQSDPRRIEPDLMKLLPQPEWENFSIRLIF 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC ARKP C C +++LC
Sbjct: 188 HGRAVCNARKPLCAGCPLADLCPS 211
>gi|294787263|ref|ZP_06752516.1| endonuclease III [Parascardovia denticolens F0305]
gi|294484619|gb|EFG32254.1| endonuclease III [Parascardovia denticolens F0305]
Length = 244
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + + +P+PK L + N F L++A ++SAQ+TDV VNK T LF TP +
Sbjct: 34 RMHKEYAILCQVYPTPKSALTFSNPFELLIATMMSAQTTDVQVNKVTPELFRRFPTPLAL 93
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ I +IG +R K+++ + +++ LI F ++P+T+E LT LPG+GRK ANV
Sbjct: 94 SQANPSEVAEIINSIGFFRTKAQHAVMIANDLITRFGGEVPRTMEELTTLPGVGRKTANV 153
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
IL AF +P VDTH+ R++ R+ P +E+ + P + + L
Sbjct: 154 ILGNAFDLPGFPVDTHVMRVTKRLHWRSDWNKTKDDPVAIEKEVTAAFEPTEWRDLSHRL 213
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ GR C ARKP+C C + + C
Sbjct: 214 IDFGRDTCHARKPECLICPLRDTCPSF 240
>gi|42522185|ref|NP_967565.1| endo III-related endonuclease [Bdellovibrio bacteriovorus HD100]
gi|39574716|emb|CAE78558.1| Endo III-related endonuclease [Bdellovibrio bacteriovorus HD100]
Length = 221
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 7/224 (3%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++SK+S + + ++ + L +P L Y N F L+VA +LSAQ
Sbjct: 1 MASKQSPAKKPSA------KQAGILATIELLKRYYPDAYCALNYTNPFELLVATILSAQC 54
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN T LF+ TP+ M + L+ IR+ G Y+ K++N+ + + L+ +
Sbjct: 55 TDERVNMVTPALFKKYPTPKAMAKAPVESLEELIRSTGFYKNKAKNLKACATTLVEKHHG 114
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++PQ+LE L L G+GRK ANV+L AF IP+ I VDTH+ R++NR+G +E+
Sbjct: 115 EVPQSLEALVELGGVGRKTANVVLGNAFNIPSGIVVDTHVTRLANRLGWVKTDNAVMIER 174
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L +++P + +WL+ HGR VCKARKP C C + C +
Sbjct: 175 QLSKLVPVEDWIMLPHWLISHGRAVCKARKPACSHCFLEETCPK 218
>gi|111021299|ref|YP_704271.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1]
gi|110820829|gb|ABG96113.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus
jostii RHA1]
Length = 281
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 101/194 (52%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + L VA +LSAQ TDV VN T LF + +L
Sbjct: 60 LAEAFPHVYCELDFTTPLDLAVATILSAQCTDVRVNMVTPALFARYPDAKAYAEAERTEL 119
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ YIR+ G YR K+ ++I L L+ FD ++P L+ L LPGIGRK ANVIL AF +
Sbjct: 120 EEYIRSTGFYRNKTNSLIGLGQALLERFDGEVPGNLKDLVTLPGIGRKTANVILGNAFDV 179
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R + P KVE ++ +I K + ++ HGR VC ARKP
Sbjct: 180 PGITVDTHFGRLVRRWKWTEEEDPVKVEHAIGALIERKEWTLLSHRVIFHGRRVCHARKP 239
Query: 212 QCQSCIISNLCKRI 225
C C+++ C
Sbjct: 240 ACGVCVLAKDCPSY 253
>gi|317486241|ref|ZP_07945074.1| endonuclease III [Bilophila wadsworthia 3_1_6]
gi|316922487|gb|EFV43740.1| endonuclease III [Bilophila wadsworthia 3_1_6]
Length = 216
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 1/213 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + ++ L + ++P + L + + L+VA +L+AQ TD VN+ T L
Sbjct: 1 MKETTMTDKQRAAKVLELLAERYPDLETHLMAESPWELLVATVLAAQCTDKRVNQVTPEL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F P + +L+ I ++G Y K++++I+ + +++ EF+ + P T++ L +L
Sbjct: 61 FRRWPDPAALAQATIPELEEVIHSVGFYHSKAKHLIAAAQLVVKEFNGETPNTMKDLIKL 120
Query: 134 PGIGRKGANVILSMAFGIPTI-GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+ RK ANV+L FGI VDTH+ RIS R+GL P +E+ L+++ P
Sbjct: 121 PGVARKTANVVLWGGFGINEGLAVDTHVKRISGRLGLTKHTDPVDIEKDLVKLFPQSEWG 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ +V GR+VC ARKP C C ++ C ++
Sbjct: 181 KVNHRMVWFGRHVCDARKPLCDECEMAPFCPKV 213
>gi|317501913|ref|ZP_07960097.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088272|ref|ZP_08337191.1| hypothetical protein HMPREF1025_00774 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896593|gb|EFV18680.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|330408516|gb|EGG87982.1| hypothetical protein HMPREF1025_00774 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 212
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ ++PS L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKKQRALQVIERLKKEYPSAGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEGLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + +++ +R G+ R K+ +I ++ +E++ K+P + L +LPG+GR
Sbjct: 61 TVEALAEADVDEIEKIVRPCGLGRSKARDISGCMKMIRDEYEGKVPDDFDALMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIKEPKKVEMALWKIIPPQEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP C+ C ++++CK+
Sbjct: 181 LVFHGRDVCTARTKPYCEKCCLADICKK 208
>gi|224476573|ref|YP_002634179.1| putative endonuclease III [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421180|emb|CAL27994.1| putative endonuclease III [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 223
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + + + +P + EL + N F L +AVLLSAQ TDV VNK T +LF+
Sbjct: 1 MLSKKKALSMIDVIADMFPDAECELKHNNPFELTIAVLLSAQCTDVLVNKVTTNLFKKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + + ++L+ IR+IG+YR K++NI L H LI++FD K+P L L G+GR
Sbjct: 61 TPQDYINVSLEELEQDIRSIGLYRNKAKNIKKLCHSLIDKFDGKVPHDRADLESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ + +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPALAVDTHVERVSKRLGICRWKDSVKEVESRLCSIIPKDRWTKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C AR P+C C + + C+ ++
Sbjct: 181 LIFFGRYHCLARAPKCDICPLFDECREGQK 210
>gi|213691195|ref|YP_002321781.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213522656|gb|ACJ51403.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 228
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 5/202 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + P+P L++ N L++A +LSAQ+TD VN T LF T + + A
Sbjct: 16 YDILRQVIPAPACALHFSNPLELLIATVLSAQTTDKRVNTVTPELFATFPTARDLAAANP 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++++ I +G YR K++++I L+ L F +P+T++GLT LPG+GRK ANV+L A
Sbjct: 76 AQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTMDGLTSLPGVGRKTANVVLGNA 135
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F IP VDTH+ R+ + P K+E+ + PP+ N + L+L GR
Sbjct: 136 FDIPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITACFPPEEWTNLSHRLILFGR 195
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C AR P C +C +S+ C
Sbjct: 196 ATCHARTPDCANCPLSDTCPSY 217
>gi|89070691|ref|ZP_01157960.1| endonuclease III [Oceanicola granulosus HTCC2516]
gi|89043712|gb|EAR49916.1| endonuclease III [Oceanicola granulosus HTCC2516]
Length = 214
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 146/209 (69%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + L +F F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT+ LF+
Sbjct: 1 MAKQLDYQTLRAVFARFHEAEPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRELFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ADTP+KMLA+GE+ L +I+TIG++R+K++N+I LS IL+ E ++P + L LPG
Sbjct: 61 VADTPEKMLALGEEGLIEHIKTIGLFRQKAKNVIKLSRILVEEHGGEVPNSRAALVALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANV+L+M + P VDTHIFR+ NR G+APGK VE+++ +P +Q +AH
Sbjct: 121 VGRKTANVVLNMWWRHPAQAVDTHIFRVGNRTGIAPGKDVEAVERAIEDHVPADYQLHAH 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+WL+LHGRY+C ARKP+C +C I C+
Sbjct: 181 HWLILHGRYICVARKPKCAACHIYEYCRY 209
>gi|315227180|ref|ZP_07868967.1| endonuclease III [Parascardovia denticolens DSM 10105]
gi|315119630|gb|EFT82763.1| endonuclease III [Parascardovia denticolens DSM 10105]
Length = 327
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + + +P+PK L + N F L++A ++SAQ+TDV VNK T LF TP +
Sbjct: 117 RMHKEYAILCQVYPTPKSALTFSNPFELLIATMMSAQTTDVQVNKVTPELFRRFPTPLAL 176
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ I +IG +R K+++ + +++ LI F ++P+T+E LT LPG+GRK ANV
Sbjct: 177 SQANPSEVAEIINSIGFFRTKAQHAVMIANDLITRFGGEVPRTMEELTTLPGVGRKTANV 236
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
IL AF +P VDTH+ R++ R+ P +E+ + P + + L
Sbjct: 237 ILGNAFDLPGFPVDTHVMRVTKRLHWRSDWNKTKDDPVAIEKEVTAAFEPTEWRDLSHRL 296
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ GR C ARKP+C C + + C
Sbjct: 297 IDFGRDTCHARKPECLICPLRDTCPSF 323
>gi|158604986|gb|ABW74799.1| endonuclease III [Campylobacter concisus 13826]
Length = 210
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ EI ++ K EL + N + L+V V+LSAQ TD VN T LFE
Sbjct: 1 MRTKKDILEIKKRLLEEFKDAKSELKFRNLYELLVCVMLSAQCTDKRVNLITPALFEAYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
++ + L+ I + + K+ N+I +++ ++ ++ +IP E L L G+G+
Sbjct: 61 DVFELASANLASLKLMINSCSFFNNKALNLIKMANSVVELYNGEIPLDEEKLKALAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L A + VDTH+FR+S+R+GL+ KTP E L R H +
Sbjct: 121 KTAHVVLLEATNANVMAVDTHVFRVSHRLGLSSAKTPEATEDDLSRAF-KTDLGKLHQGM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VL GRY CKA+KP C CI+++LCK +
Sbjct: 180 VLFGRYTCKAKKPLCHECILNDLCKSKDK 208
>gi|167752258|ref|ZP_02424385.1| hypothetical protein ALIPUT_00501 [Alistipes putredinis DSM 17216]
gi|167660499|gb|EDS04629.1| hypothetical protein ALIPUT_00501 [Alistipes putredinis DSM 17216]
Length = 218
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F P + EL Y + + L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MTLKERYAGVIAWFEEHMPVAESELAYGSPYELLVAVILSAQCTDKRVNMTTPALFEAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A +++ YI++I K++N+ ++ +L EF ++P L+ L RLPG+GR
Sbjct: 61 TPQAMAAATPEQIYPYIKSISYPNNKAKNLAGMARMLCEEFGGEVPSDLKELQRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ ++ + + VDTH+FR+SNRIGL KTP + E +L + IP AH+W
Sbjct: 121 KTANVVGAVIWQKEVMPVDTHVFRVSNRIGLTNRSKTPLQTELTLEKYIPSHLLPTAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRYVC AR P+C C +S C++ +
Sbjct: 181 LILHGRYVCTARAPKCAECGVSTWCRKYAE 210
>gi|121604980|ref|YP_982309.1| endonuclease III [Polaromonas naphthalenivorans CJ2]
gi|120593949|gb|ABM37388.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Polaromonas naphthalenivorans CJ2]
Length = 214
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 139/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + F P P EL Y + F L+ AVLLSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MKREHIGLFFATLKAANPMPVTELEYTSVFELLTAVLLSAQATDVSVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G +L+ YI+TIG+Y K++N+++ +LI + ++P+T E L +LPG+GRK
Sbjct: 61 PQAILNLGVDRLEAYIKTIGLYHSKAKNLLATCEMLIAQHGGQVPRTREALEKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG + VDTHIFR+SNR GLAPGK +VEQ L++ IP ++ +AH+WL+
Sbjct: 121 TANVVLNTAFGEAVMAVDTHIFRVSNRTGLAPGKNVQEVEQKLMQRIPTEYLIDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC ARKP C C ++ C
Sbjct: 181 LLGRYVCIARKPLCWQCAVAPFCDY 205
>gi|187250570|ref|YP_001875052.1| endonuclease III [Elusimicrobium minutum Pei191]
gi|186970730|gb|ACC97715.1| Endonuclease III [Elusimicrobium minutum Pei191]
Length = 215
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L +++ +I + +P K L Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 2 LLKKEKISKIVKILRKDYPDTKTALGYESAFQLLVAVILSAQCTDARVNMVTPVLFAKYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM + ++ I++ G Y K+++I++ + IL +F+ ++P + L +L G+ R
Sbjct: 62 TPQKMAKANLEDIETIIKSTGFYHAKAKSIVTTAQILTEDFNGEVPDNMNDLLKLRGVAR 121
Query: 139 KGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + VDTH+ R+S R GL P KVE L++ +P + A
Sbjct: 122 KTANVVLSDFFKKTEGVVVDTHVKRVSYRTGLTNNTAPVKVELDLMKKLPKQDWLWAGNA 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
V HGR VC ARKP+C C I+ +C +
Sbjct: 182 FVWHGRKVCDARKPKCSLCSITKICPK 208
>gi|240137162|ref|YP_002961631.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Methylobacterium extorquens AM1]
gi|240007128|gb|ACS38354.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Methylobacterium extorquens AM1]
Length = 233
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 143/198 (72%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF IADTPQKML +
Sbjct: 22 EIFSRLRAADPEPRSELEYLNPYTLLVAVVLSAQATDKSVNLATAPLFAIADTPQKMLDL 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE++++++IRTIG++ K++N+I+LS IL+ +P E L LPG+G K A+V+L+
Sbjct: 82 GEEQVRHFIRTIGLFNTKAKNVIALSRILLERHGGAVPCEAEALEVLPGVGTKTASVVLN 141
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG+P I VDTHIFR+SNRI L T ++V+ L +P + NAH+WL+LHGRY+C
Sbjct: 142 VAFGVPRIAVDTHIFRVSNRIPLFSAATTDRVQAGLEARVPEPFRLNAHHWLILHGRYIC 201
Query: 207 KARKPQCQSCIISNLCKR 224
KAR+P+C C I++LC+
Sbjct: 202 KARRPECPRCSIADLCRY 219
>gi|41406498|ref|NP_959334.1| hypothetical protein MAP0400 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394847|gb|AAS02717.1| Nth [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 265
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 101/196 (51%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +P EL + L VA +LSAQSTD VN T LF+
Sbjct: 42 RILAQAFPEAHCELDFTTPLELTVATILSAQSTDKRVNLTTPALFKRYTCALDYARADRD 101
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L+N IR G +R K+ +I L L+ FD ++P T+ L LPG+GRK ANVIL AF
Sbjct: 102 ELENLIRPTGFFRNKASALIRLGQALVERFDGEVPATMAELVTLPGVGRKTANVILGNAF 161
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
G+P I VDTH R+ +R K P K+E ++ +I + ++ HGR VC +R
Sbjct: 162 GVPGITVDTHFARLVHRWRWTAEKDPVKIEHAVGELIERSEWTMLSHRVIFHGRRVCHSR 221
Query: 210 KPQCQSCIISNLCKRI 225
KP C C+++ C
Sbjct: 222 KPACGVCLLAKDCPSF 237
>gi|325508103|gb|ADZ19739.1| endonuclease, gene nth [Clostridium acetobutylicum EA 2018]
Length = 196
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 125/193 (64%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+P K L + + L++A +LSAQ TD VN T+ LF+ +TP KM + E++LQ
Sbjct: 1 MYPQAKCALDFKTPYELLIATVLSAQCTDKRVNLVTQELFKEYNTPYKMCELTEEELQEK 60
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
IRT G+Y+ KS+NI+ S LI+ F+ ++P +E LT LPG+GRK ANV++S AFGIP I
Sbjct: 61 IRTCGLYKNKSKNILEASRGLIDRFNGEVPSNMEELTSLPGVGRKTANVVMSNAFGIPAI 120
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH+FR+SNRIGLA K + E+ L+ I K H+ L+ HGR +CKAR+P C+
Sbjct: 121 AVDTHVFRVSNRIGLAKSKNVYETEKQLMENIDKKDWSTMHHALIWHGRQICKARRPDCE 180
Query: 215 SCIISNLCKRIKQ 227
C + +C K+
Sbjct: 181 KCGLKEVCNYFKE 193
>gi|238019075|ref|ZP_04599501.1| hypothetical protein VEIDISOL_00937 [Veillonella dispar ATCC 17748]
gi|237864330|gb|EEP65620.1| hypothetical protein VEIDISOL_00937 [Veillonella dispar ATCC 17748]
Length = 211
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF
Sbjct: 1 MRVTKAIKAEQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KML IG KL+ I+ G+Y+ K++N+I+ IL+ ++ ++P+ + L LPG+G
Sbjct: 61 NHPAKMLEIGVTKLETLIKDCGLYKSKAKNLIATCQILVEQYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR++NR+ L KTP ++E+ L + IP + AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVANRLKLGIAKTPEEMEKKLQKAIPKEDWAAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR +CKARKP C+ C ++++C +
Sbjct: 181 LIYHGRKLCKARKPLCEECFLNHVCPSAGK 210
>gi|313904296|ref|ZP_07837674.1| DNA-(apurinic or apyrimidinic site) lyase [Eubacterium
cellulosolvens 6]
gi|313470846|gb|EFR66170.1| DNA-(apurinic or apyrimidinic site) lyase [Eubacterium
cellulosolvens 6]
Length = 209
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+++V L+AQ TD V+ T L+E
Sbjct: 1 MTKKELALEVIRRLKKEYPDTHCTLDYSQAWQLLISVRLAAQCTDKRVDMITPLLYEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + +++ IR G+ + K+ +I + +L E+ +++P ++ L +LPG+GR
Sbjct: 61 SIEALAVADPDEIEEIIRPCGLGKSKARDISACMKMLHYEYQDQVPDNMKELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+SN IGL K P KVE+ L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLSNLIGLVDDLKDPAKVEKELWKIIPPEEGNDFCHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
+V HGR VC ARKP C+ C + ++C+
Sbjct: 181 MVDHGRAVCVARKPACERCCLMDICRH 207
>gi|289550767|ref|YP_003471671.1| Endonuclease III [Staphylococcus lugdunensis HKU09-01]
gi|289180299|gb|ADC87544.1| Endonuclease III [Staphylococcus lugdunensis HKU09-01]
Length = 219
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VNK T LF
Sbjct: 1 MISKKKALKMIDIIADMFPNAECELRHNNAFELTIAVLLSAQCTDNLVNKVTATLFTKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++L+ IR+IG+YR K++NI L L+ +F+ +IPQT L L G+GR
Sbjct: 61 TPEDYLAVPLEELEQDIRSIGLYRNKAKNIKKLCTSLLEKFNGQIPQTHAELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPALAVDTHVERVSKRLGINRWKDNVRQVEDRLCSIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + + C+ ++
Sbjct: 181 LIFFGRYHCIARKPKCDICPLFDDCREGQK 210
>gi|109947926|ref|YP_665154.1| endonuclease III [Helicobacter acinonychis str. Sheeba]
gi|109715147|emb|CAK00155.1| endonuclease III [Helicobacter acinonychis str. Sheeba]
Length = 216
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ ++I L P+ EL++ N + L+VA +LSAQ TD VN T LFE +
Sbjct: 10 QKAQQIKELLLKHSPNQTTELHHKNPYELLVATILSAQCTDARVNIVTPKLFEKYPSVND 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++++ I+++ + KS+++I+++ ++ +F+ IP T + L L G+G+K AN
Sbjct: 70 LALASLEEVKEIIKSVSYFNNKSKHLINMAQKVVRDFNGVIPSTQKELMGLDGVGQKTAN 129
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+LS+ F + VDTH+FR ++R+GL+ KTP K E+ L + H+ L+L G
Sbjct: 130 VVLSVCFDANCLAVDTHVFRATHRLGLSDAKTPIKTEEELSELF-KDDLSKLHHALILFG 188
Query: 203 RYVCKARKPQCQSCIISNLC 222
RY CKA+ P C +C ++ C
Sbjct: 189 RYTCKAKNPLCDACFLTAFC 208
>gi|317473465|ref|ZP_07932759.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
gi|316899115|gb|EFV21135.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
Length = 211
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K EI ++P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKDKLALEIIERLKKEYPDVGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVQDLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ +R G+ R K+ +I + IL +E+ IP + L +LPG+GR
Sbjct: 61 DVNALAEADPADIEAIVRPCGLGRSKARDISACMKILRDEYGGGIPDNFKDLMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+++ FG P I DTH R+ NR+GL P KVE +L IIPP+ + +
Sbjct: 121 KSANLVMGDVFGEPAIVTDTHCIRLVNRMGLVNQIKDPKKVEMALWEIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV GR +C AR KP C+ C + ++C +
Sbjct: 181 LVFLGRDICTARTKPHCEKCCLRDICPK 208
>gi|295093523|emb|CBK82614.1| Predicted EndoIII-related endonuclease [Coprococcus sp. ART55/1]
Length = 216
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +I ++P L + + L+V+V L+AQ TD VN + LF
Sbjct: 9 KKQRTLDIIERLKKEYPDTVCTLDTSHAWQLLVSVRLAAQCTDARVNVVVQDLFAKYPGV 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ A ++ +R G+ + K+ +I + ++L++ +D ++P +L+ L +LPG+GRK
Sbjct: 69 KELAAADVSDIEAIVRPCGLGKSKARDISACMNMLVDSYDCQVPDSLDELLKLPGVGRKS 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+I+ +G P I DTH R+ NR+GL G P KVE L +++PP + + LV
Sbjct: 129 ANLIMGDIYGKPAIVTDTHCIRLVNRMGLVDGIKDPKKVEMELWKLVPPDESNDFCHRLV 188
Query: 200 LHGRYVCKAR-KPQCQSCIISNLCKRI 225
HGR VC AR KP C +C +S++CK+I
Sbjct: 189 DHGRSVCTARTKPHCDACCLSDICKKI 215
>gi|242242733|ref|ZP_04797178.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis W23144]
gi|242233869|gb|EES36181.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis W23144]
Length = 219
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VN+ T+ LF
Sbjct: 1 MISKKKALQMIDVIADMFPNAECELNHRNAFDLTIAVLLSAQCTDNLVNRVTQSLFRKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L H LI +F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCHSLIEQFNGQIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCDIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C+ C + N C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCEICPLLNDCREGQK 210
>gi|254773460|ref|ZP_05214976.1| endonuclease III [Mycobacterium avium subsp. avium ATCC 25291]
Length = 226
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 102/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +P EL + L VA +LSAQSTD VN T+ LF+
Sbjct: 3 RILAQAFPEAHCELDFTTPLELTVATILSAQSTDKRVNLTTRALFKRYTCALDYAQADRD 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L+N IR G +R K+ +I L L+ FD ++P T+ L LPG+GRK ANVIL AF
Sbjct: 63 ELENLIRPTGFFRNKASALIRLGQALVERFDGEVPATMAELVTLPGVGRKTANVILGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
G+P I VDTH R+ +R K P K+E ++ +I + ++ HGR VC +R
Sbjct: 123 GVPGITVDTHFARLVHRWRWTAEKDPVKIEHAVGELIERSEWTMLSHRVIFHGRRVCHSR 182
Query: 210 KPQCQSCIISNLCKRI 225
KP C C+++ C
Sbjct: 183 KPACGVCLLAKDCPSF 198
>gi|315658263|ref|ZP_07911135.1| endonuclease III [Staphylococcus lugdunensis M23590]
gi|315496592|gb|EFU84915.1| endonuclease III [Staphylococcus lugdunensis M23590]
Length = 219
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 127/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VNK LF
Sbjct: 1 MISKKKALKMIDIIADMFPNAECELRHNNAFELTIAVLLSAQCTDNLVNKVIATLFTKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++L+ IR+IG+YR K++NI L L+ +F+ +IPQT L L G+GR
Sbjct: 61 TPEDYLAVPLEELEQDIRSIGLYRNKAKNIKKLCTSLLEKFNGQIPQTHAELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPALAVDTHVERVSKRLGINRWKDNVRQVEDRLCSIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + + C+ ++
Sbjct: 181 LIFFGRYHCIARKPKCDICPLFDDCREGQK 210
>gi|119356338|ref|YP_910982.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Chlorobium phaeobacteroides DSM 266]
gi|119353687|gb|ABL64558.1| DNA-(apurinic or apyrimidinic site) lyase [Chlorobium
phaeobacteroides DSM 266]
Length = 216
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 1/205 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++ I +P PK EL Y + F L++A +L+AQ+TD VN+ATK LF +
Sbjct: 6 KEKITFIKKALGSVYPEPKSELQYASAFQLLIATILAAQATDKKVNEATKELFLLCPDAL 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M ++ +RT+ + K+ NI+++S L+ EF+ ++P E L LPG+GRK A
Sbjct: 66 SMSRTEPDTIKQLVRTLNYFNNKAANILAVSCRLVEEFNGEVPPNREALESLPGVGRKTA 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+L+ AFG P + VDTH+ R+SNRIGL P + E++L IIP + H++L+LH
Sbjct: 126 NVVLANAFGQPVMPVDTHVHRVSNRIGLCATSKPEQTEEALTNIIPEPWMIDFHHYLLLH 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
GRY CKA+KP C C++ +C K
Sbjct: 186 GRYTCKAKKPACADCVLKEIC-AFK 209
>gi|330813407|ref|YP_004357646.1| endonuclease III [Candidatus Pelagibacter sp. IMCC9063]
gi|327486502|gb|AEA80907.1| endonuclease III [Candidatus Pelagibacter sp. IMCC9063]
Length = 210
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 95/202 (47%), Positives = 142/202 (70%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ IF S +PK +L Y + FTL+V+V+LSAQ TDVNVN TK ++ + +TP+ +
Sbjct: 6 DNIFKELSKIIKNPKSDLKYRSKFTLLVSVVLSAQCTDVNVNNVTKDIYPLYNTPEDFVK 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+G+KK++ I IG++R K++++ +LS +L+ + +K+P + L LPG+GRK ANV+L
Sbjct: 66 LGQKKIEKLINRIGLFRNKAKSVYNLSKLLVEKHKSKVPNNFDKLFALPGVGRKTANVVL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ FG PTI VDTHIFR+SNR GLAPGK P++VEQ+L +++P K+ AH+ ++LHGRY
Sbjct: 126 NEGFGKPTIAVDTHIFRVSNRTGLAPGKGPDQVEQALYKVVPDKYLKEAHHLILLHGRYT 185
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
CKAR P C+ C+I CK +
Sbjct: 186 CKARTPNCKECVIIKFCKFKNK 207
>gi|167754535|ref|ZP_02426662.1| hypothetical protein CLORAM_00037 [Clostridium ramosum DSM 1402]
gi|237733826|ref|ZP_04564307.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167705367|gb|EDS19946.1| hypothetical protein CLORAM_00037 [Clostridium ramosum DSM 1402]
gi|229383164|gb|EEO33255.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 220
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 1/205 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + F +P EL + + F L+VAV+LSAQ+TD VN+ T++LF+ T
Sbjct: 8 MNKEKTNRVLEYFDELFPDAYCELNHESDFQLLVAVMLSAQTTDKKVNQLTENLFKKYPT 67
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + +L+ I+TIG+YR K++N+++LSH+LI +FD +P + L LPG+GRK
Sbjct: 68 VEAVSQASLPELEQDIKTIGLYRNKAKNLLALSHVLIEQFDGIVPSDQKQLESLPGVGRK 127
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+ S+AF IP VDTH+ RIS R+G A VE+ L R IP +H+
Sbjct: 128 TANVVRSVAFDIPAFAVDTHVERISKRLGFAKRDDNVLTVEKKLCRSIPRNRWNKSHHQF 187
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ GRY CKA P C C + ++CK
Sbjct: 188 IFFGRYFCKATNPSCTECKLFDMCK 212
>gi|239827461|ref|YP_002950085.1| endonuclease III [Geobacillus sp. WCH70]
gi|239807754|gb|ACS24819.1| endonuclease III [Geobacillus sp. WCH70]
Length = 223
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +++ +P EL + N F L++AV+LSAQ TD VNK TKHLFE
Sbjct: 1 MLTKQQIRYCLDKMGEMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKHLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ +++ ++LQ IR+IG+YR K++NI L IL+ +++ ++P+ + L +LPG+GR
Sbjct: 61 TPEDYVSVPLEELQQDIRSIGLYRNKAKNIQKLCAILMEKYNGEVPKDRDELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+G + +VE++L++ IP + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLGFCRWDASVLEVEETLMKKIPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC C + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQSPQCHVCPLLDLCREGKK 210
>gi|304406876|ref|ZP_07388530.1| endonuclease III [Paenibacillus curdlanolyticus YK9]
gi|304343863|gb|EFM09703.1| endonuclease III [Paenibacillus curdlanolyticus YK9]
Length = 235
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + +P EL + N F L +AVLLSAQ TD VN+ T+ LF+
Sbjct: 1 MKAKERMRRILDDMTEMFPDAHCELRHSNPFELTIAVLLSAQCTDETVNRVTESLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ +A+ +L+ IR IG++R K+ NI L H++I +F +P+ E LT LPG+GR
Sbjct: 61 KPEDYIAVPLDELEQDIRRIGLFRSKASNIQKLCHLVIEKFGGDVPREHEQLTELPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S AFG+P I VDTH+ R+S R+ +A +VE+ L++++P + H+
Sbjct: 121 KTANVVMSNAFGVPAIAVDTHVERVSKRLSIAKPDDSVLEVEKKLMKLVPREEWTQTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
++ GRY CKA++P+C+ C + ++CK
Sbjct: 181 MIFFGRYHCKAQQPKCEICPLLDICK 206
>gi|225026761|ref|ZP_03715953.1| hypothetical protein EUBHAL_01013 [Eubacterium hallii DSM 3353]
gi|224955880|gb|EEG37089.1| hypothetical protein EUBHAL_01013 [Eubacterium hallii DSM 3353]
Length = 218
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + ++P L Y + L+V+V L+AQ TD VN K LF
Sbjct: 1 MRKKERAAIVIERLKKEYPGADCTLDYNEAWKLLVSVRLAAQCTDERVNIIVKDLFAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
++ + ++ +R G+ + K+ +I +L +EF +K+P E L +LPG+GR
Sbjct: 61 GVNELAEAEPEDIEAIVRPCGLGKSKARDISKCMRMLRDEFGSKVPDNFEDLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL K P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDNEKNPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
LV HGR VC AR P C+ C ++++CK
Sbjct: 181 LVYHGREVCTARTTPYCEKCCLADVCKSY 209
>gi|23335629|ref|ZP_00120863.1| COG0177: Predicted EndoIII-related endonuclease [Bifidobacterium
longum DJO10A]
gi|23464990|ref|NP_695593.1| endonuclease III [Bifidobacterium longum NCC2705]
gi|189440057|ref|YP_001955138.1| putative EndoIII-related endonuclease [Bifidobacterium longum
DJO10A]
gi|227545733|ref|ZP_03975782.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239622592|ref|ZP_04665623.1| endonuclease III [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296453434|ref|YP_003660577.1| endonuclease III [Bifidobacterium longum subsp. longum JDM301]
gi|312133395|ref|YP_004000734.1| nth [Bifidobacterium longum subsp. longum BBMN68]
gi|322688415|ref|YP_004208149.1| endonuclease III [Bifidobacterium longum subsp. infantis 157F]
gi|322690434|ref|YP_004220004.1| endonuclease III [Bifidobacterium longum subsp. longum JCM 1217]
gi|23325590|gb|AAN24229.1| endonuclease III [Bifidobacterium longum NCC2705]
gi|189428492|gb|ACD98640.1| Putative EndoIII-related endonuclease [Bifidobacterium longum
DJO10A]
gi|227213849|gb|EEI81688.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239514589|gb|EEQ54456.1| endonuclease III [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291517527|emb|CBK71143.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Bifidobacterium longum subsp. longum F8]
gi|296182865|gb|ADG99746.1| endonuclease III [Bifidobacterium longum subsp. longum JDM301]
gi|311772621|gb|ADQ02109.1| Nth [Bifidobacterium longum subsp. longum BBMN68]
gi|320455290|dbj|BAJ65912.1| endonuclease III [Bifidobacterium longum subsp. longum JCM 1217]
gi|320459751|dbj|BAJ70371.1| endonuclease III [Bifidobacterium longum subsp. infantis 157F]
Length = 228
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 5/202 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + P+P L++ N L++A +LSAQ+TD VN T LF T + + A
Sbjct: 16 YDILRQVIPAPACALHFSNPLELLIATVLSAQTTDKRVNTVTPELFATYPTARDLAAANP 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++++ I +G YR K++++I L+ L F +P+T++ LT LPG+GRK ANV+L A
Sbjct: 76 AQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLGNA 135
Query: 149 FGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F IP VDTH+ R+ + P K+E+ + PP+ N + L+L GR
Sbjct: 136 FDIPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGR 195
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C AR P C +C +S+ C
Sbjct: 196 ATCHARTPDCANCPLSDTCPSY 217
>gi|170079050|ref|YP_001735688.1| endonuclease III [Synechococcus sp. PCC 7002]
gi|169886719|gb|ACB00433.1| endonuclease III [Synechococcus sp. PCC 7002]
Length = 220
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K + +P L Y L+VA +LSAQ TD VNK T LF
Sbjct: 9 KKKRAIAVLEKLHELYPDATCSLDYETPVQLMVATILSAQCTDERVNKVTPALFARFPDA 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++ +R+ G YR K++NI ++ F+ K+PQT+E L LPG+ RK
Sbjct: 69 AAFAGANVADIEQLVRSTGFYRNKAKNIQGACQRIMAVFNGKVPQTMEELLTLPGVARKT 128
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFGI + VDTH+ R+SNR+ L + P ++E+ L+++IP N L+
Sbjct: 129 ANVVLAHAFGICAGVTVDTHVKRLSNRLRLTKSENPVQIERDLMKLIPQPEWENWSIRLI 188
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
HGR VC ARKPQC+ C I+NLC
Sbjct: 189 YHGRAVCNARKPQCEVCAIANLCPS 213
>gi|115372345|ref|ZP_01459654.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|115370558|gb|EAU69484.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
Length = 207
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 109/189 (57%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + EL + L+VAV+LSAQ TD VN T LF+ + + ++ YI+
Sbjct: 2 PDARIELDHRTPLELLVAVILSAQCTDKRVNLVTPALFQRFPDARAYAEAQPQDVEPYIQ 61
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
T G+YR K++NI++ + L++E +++P++ E L +LPG+GRK A V+ G V
Sbjct: 62 TCGLYRAKAKNIVAAAQALVHEHGSEVPRSREALEQLPGVGRKTAGVVCIHLGGDTAFPV 121
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
DTH+ R++NR+G P+KVE L ++P + H LV HGR C AR P C+ C
Sbjct: 122 DTHVNRLANRLGFTRHHHPDKVEDDLQALLPSERWRMGHQLLVWHGRRTCFARSPACERC 181
Query: 217 IISNLCKRI 225
+++ LC ++
Sbjct: 182 VVAGLCPKL 190
>gi|303230869|ref|ZP_07317616.1| endonuclease III [Veillonella atypica ACS-049-V-Sch6]
gi|302514629|gb|EFL56624.1| endonuclease III [Veillonella atypica ACS-049-V-Sch6]
Length = 211
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++ E L + K L Y N F L+VAV+LSAQ TD VN TK LF
Sbjct: 1 MRVTKAIKAEQLALLEEHYFDAKPALKYTNEFELLVAVVLSAQCTDERVNIVTKRLFPAL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P KML +G KL+ I+ G+Y+ K++N+I+ HIL+ ++ ++P+ + L LPG+G
Sbjct: 61 NHPAKMLEVGVTKLEALIKDCGLYKSKAKNLIATCHILVEQYHGEVPREFDQLVELPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV++S+ FG P I VDTH+FR++NR+ L KTP ++EQ L + IP + AH+W
Sbjct: 121 RKTANVVVSVLFGTPAIAVDTHVFRVANRLKLGIAKTPEEMEQKLQKAIPKEKWSAAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ HGR VCKARKP C++C + +LC +
Sbjct: 181 LIYHGRRVCKARKPLCETCFLHHLCPSAGK 210
>gi|297627092|ref|YP_003688855.1| endonuclease III [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922857|emb|CBL57437.1| Putative endonuclease III [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 252
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 101/201 (50%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
EIF + +P + L + + F L+VA +LSAQ+TD VNK T LF+ +
Sbjct: 35 AHEIFRILHQTYPDARCALTFHDPFELLVATVLSAQTTDKGVNKVTPILFDHYPDAAALG 94
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A +++ IR G + K+ I+ + L F +P+ ++ LT LPG+GRK A V+
Sbjct: 95 AASLPEVEQIIRPTGFFHNKATAIVGIGQALTENFHGVVPREIDQLTSLPGVGRKTAQVV 154
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
AFGIP + DTH+ R+S R+G P VE+ + + L+ HGR
Sbjct: 155 RGHAFGIPGVTTDTHVLRVSKRLGFTSSTKPLTVERDVSALFDESTWTLLSDTLIFHGRA 214
Query: 205 VCKARKPQCQSCIISNLCKRI 225
C A+K C +C ++ LC
Sbjct: 215 RCHAKKAACGACPVAGLCPSF 235
>gi|300087945|ref|YP_003758467.1| endonuclease III [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527678|gb|ADJ26146.1| endonuclease III [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 213
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 1/202 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ E+ +P + L Y N L+ AV+LSAQ+TD VN T LFE T
Sbjct: 6 ADIHEVIARLKQAYPDGRIALAYSNPLELLAAVILSAQTTDAAVNSVTSALFEKYRTAPD 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+L+ +R G Y K+ ++I + +L+ +FD ++PQT+ L ++PG RK AN
Sbjct: 66 YADADVAELETIVRRTGFYHNKARSLIGMGRLLVEKFDGQVPQTMAELIQIPGAARKTAN 125
Query: 143 VILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++L AFG I VDTH+ R++ R+G + K P+K+E++L++I+P + + + H
Sbjct: 126 IVLWNAFGKIEGIAVDTHVARLAKRLGYSQEKDPDKIEKNLMKIVPHEEWGRFPHLIQEH 185
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
GR +C ARKP+C C + +C
Sbjct: 186 GRVICFARKPKCVECFMKEICP 207
>gi|294055768|ref|YP_003549426.1| endonuclease III [Coraliomargarita akajimensis DSM 45221]
gi|293615101|gb|ADE55256.1| endonuclease III [Coraliomargarita akajimensis DSM 45221]
Length = 217
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 114/201 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +P P L + + +TL++AVLLSAQ TD VN+ T LFE AD
Sbjct: 1 MIKSERVTHIQERLQSLYPEPPIPLNHKDPYTLLIAVLLSAQCTDERVNQITPLLFERAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + + ++ IR G+ KS+ I LS IL+++ + ++P ++ L LPG+G
Sbjct: 61 NPTDMVKLSVEAIRAIIRPCGLSPMKSKGIAGLSQILLDQHNGEVPADMDALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P+ VDTHI R++ R GL+ GK + E+ L R+ P + + H +
Sbjct: 121 KTASVVMSQAFGVPSFPVDTHIHRLAQRWGLSSGKNVVQTERDLKRLFPREAWNDLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IYYGREYCTARGCDGTVCEMC 201
>gi|329725405|gb|EGG61888.1| endonuclease III [Staphylococcus epidermidis VCU144]
Length = 219
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VN+ T+ LF
Sbjct: 1 MISKKKALQMIDVIADMFPNAECELNHRNAFDLTIAVLLSAQCTDNLVNRVTQSLFRKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L H LI +F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCHSLIEQFNGQIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ + +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDSVRQVEDRLCDIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C+ C + N C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCEICPLLNDCREGQK 210
>gi|27468058|ref|NP_764695.1| endonuclease-like protein [Staphylococcus epidermidis ATCC 12228]
gi|57866952|ref|YP_188599.1| endonuclease III [Staphylococcus epidermidis RP62A]
gi|293366579|ref|ZP_06613256.1| endonuclease III [Staphylococcus epidermidis M23864:W2(grey)]
gi|27315603|gb|AAO04737.1|AE016747_234 endonuclease-like protein [Staphylococcus epidermidis ATCC 12228]
gi|57637610|gb|AAW54398.1| endonuclease III [Staphylococcus epidermidis RP62A]
gi|291319348|gb|EFE59717.1| endonuclease III [Staphylococcus epidermidis M23864:W2(grey)]
gi|329735386|gb|EGG71678.1| endonuclease III [Staphylococcus epidermidis VCU045]
Length = 219
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VN+ T+ LF
Sbjct: 1 MISKKKALQMIDVIADMFPNAECELNHRNAFDLTIAVLLSAQCTDNLVNRVTQSLFRKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L H LI +F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCHSLIEQFNGQIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ + +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDSVRQVEDRLCDIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C+ C + N C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCEICPLLNDCREGQK 210
>gi|120603042|ref|YP_967442.1| endonuclease III [Desulfovibrio vulgaris DP4]
gi|120563271|gb|ABM29015.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Desulfovibrio vulgaris DP4]
Length = 285
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++ L ++P+P L N + L+VA +L+AQ TD VNK T HLF
Sbjct: 1 MPLPSVQQRALQVLDLLRRRYPTPATHLVARNPWELLVATVLAAQCTDERVNKVTPHLFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ P + ++ L+ I + G YR K++N++ + + ++P+T++ L +LPG
Sbjct: 61 LWPDPAALACATQEALEEVIHSTGFYRNKAKNLLGAARRVTEVHGGEVPRTMDELVQLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ RK ANV+L FG+ I VDTH+ RI +R+GL P VE+ L+R+ P + +
Sbjct: 121 VARKTANVVLWGGFGVNEGIAVDTHVKRIVHRMGLTKETDPVAVERDLMRLYPREAWGDV 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ LV GR+VC ARKP C+ C ++ +C ++
Sbjct: 181 NHMLVWFGRHVCDARKPLCEQCEMAGICAKV 211
>gi|239623210|ref|ZP_04666241.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522176|gb|EEQ62042.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 261
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQS 61
+SK S +E I ++ + L + + L++AV++SAQ
Sbjct: 36 ASKPSSGKPSKKRETKKEQAARIERILNALDKEYGTEYRCYLNHETPWQLLIAVIMSAQC 95
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN T LF+ DT +K A K+L+ I + G Y K++NII+ L+ +F
Sbjct: 96 TDARVNIVTADLFKKYDTLEKFAAADLKELEKDIHSTGFYHMKAKNIIACCKDLVEKFGG 155
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P T+E LT L G+GRK ANVI + P+I VDTH+ RIS ++GL + P K+E
Sbjct: 156 QVPDTIEDLTSLAGVGRKTANVIRGNIYNEPSIVVDTHVKRISRKLGLTKEEDPEKIEYD 215
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
L++++P H + ++ GR +C AR+P C C + C
Sbjct: 216 LMKVLPKDHWILWNIHIITLGRTICIARRPGCGQCFLREDCP 257
>gi|320538045|ref|ZP_08037947.1| endonuclease III [Treponema phagedenis F0421]
gi|320145100|gb|EFW36814.1| endonuclease III [Treponema phagedenis F0421]
Length = 243
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 108/205 (52%), Positives = 150/205 (73%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L K + E+F + P PKGELY+ N FTL+VAV+LSAQ+TDV VNKATK LFE+A
Sbjct: 31 RLLDKKAIYEVFKRWQSNNPEPKGELYWKNTFTLLVAVVLSAQATDVGVNKATKVLFEVA 90
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+P+++L +GE+ L+ YI+TI +Y K++ II LS ++ EF K+P + E L LPG+G
Sbjct: 91 SSPEEILKLGEENLKEYIKTINLYPTKAKRIIGLSEQILREFGGKVPCSREALESLPGVG 150
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L++ FG+P I VDTHI R + RIGL+ GKTP +VE+ LLRI P + NAH+W
Sbjct: 151 RKTANVVLNIGFGMPAIAVDTHILRTAPRIGLSDGKTPREVEEDLLRITPEEFLPNAHHW 210
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++LHGRY+C+ARKP+C C + ++C
Sbjct: 211 ILLHGRYICQARKPKCAECFLEDIC 235
>gi|15789799|ref|NP_279623.1| endonuclease III [Halobacterium sp. NRC-1]
gi|169235518|ref|YP_001688718.1| DNA-(apurinic or apyrimidinic site) lyase endonuclease III
[Halobacterium salinarum R1]
gi|10580185|gb|AAG19103.1| endonuclease III [Halobacterium sp. NRC-1]
gi|167726584|emb|CAP13369.1| DNA-(apurinic or apyrimidinic site) lyase endonuclease III
[Halobacterium salinarum R1]
Length = 227
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + P P+ L + + L+VAV+LSAQ TD VN T+HLF+ +T
Sbjct: 8 RSAQVGTVIDRLREQHPDPEISLRFSSRMELLVAVILSAQCTDERVNAETEHLFDTYETV 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
E+ L + +I Y K+ I S + ++ + D +P T+ LT L G+GRK
Sbjct: 68 ADYANADEEALAAELNSITYYNSKAGYIKSAAQSILEDHDGAVPDTMSDLTDLSGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ R+S R+G+ K P +E L+ ++P H N +WL+
Sbjct: 128 ANVVLQHGHDLTQGIVVDTHVQRLSRRLGITEKKRPEAIETDLMPVVPEDHWKNYTHWLI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C AR P C +C+++++C K
Sbjct: 188 AHGRETCTARNPDCGACVLADICPSSK 214
>gi|304415107|ref|ZP_07395839.1| endonuclease III [Candidatus Regiella insecticola LSR1]
gi|304283040|gb|EFL91471.1| endonuclease III [Candidatus Regiella insecticola LSR1]
Length = 211
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I F + P P EL Y F L++AVLLSAQ+TDV+VNK T L+ +A+T
Sbjct: 1 MNKQKRVAILTRFQERNPHPTTELIYSTPFELLIAVLLSAQATDVSVNKVTAKLYAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+++LA+G ++++I+TIG++ K+ENII +L+++ K+P+ E L L G+GRK
Sbjct: 61 PERLLAMGVDAIKDHIKTIGLFNNKAENIIKTCRLLLDKHQGKVPEDREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG PTI VDTHIFR+ NR G APGK ++VEQ LL+++P + + N H+WL+
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGKNVDQVEQKLLKVVPTEFKPNCHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY C ARKP C SC+I +LC+ +
Sbjct: 181 LHGRYSCMARKPHCASCLIEDLCEFKDK 208
>gi|332671879|ref|YP_004454887.1| endonuclease III [Cellulomonas fimi ATCC 484]
gi|332340917|gb|AEE47500.1| endonuclease III [Cellulomonas fimi ATCC 484]
Length = 231
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 112/190 (58%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P + EL + + F L+VA +LSAQ+TDV VN T LF P + A +L+
Sbjct: 25 RYPDARCELDFTSPFELLVATVLSAQTTDVRVNLTTPTLFARYPDPAALAAADPDELEEI 84
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+R G +R K++++ LS +L+ +F +P L+ L RLPG+GRK ANV+L AFGIP I
Sbjct: 85 LRPTGFFRAKAKSVTGLSRVLVEQFGGVVPHRLDDLVRLPGVGRKTANVVLGNAFGIPGI 144
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
DTH+ R+S R+G + P VE+ L ++P K A + L+ HGR C AR+P C
Sbjct: 145 TTDTHVLRLSLRLGYTTSEDPLVVERELGELLPRKDWTMACHRLIFHGRRTCFARRPACG 204
Query: 215 SCIISNLCKR 224
+C ++ C
Sbjct: 205 ACPVAAWCPS 214
>gi|88607623|ref|YP_505472.1| endonuclease III [Anaplasma phagocytophilum HZ]
gi|88598686|gb|ABD44156.1| endonuclease III [Anaplasma phagocytophilum HZ]
Length = 209
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 144/200 (72%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + IF F P P+ EL Y N FTL+VA++LSA++TDV+VNK T LF++A++ +K
Sbjct: 2 QKADIIFSRFFSDNPHPRIELQYRNEFTLLVAIVLSARTTDVSVNKITAKLFDVANSAKK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+GE L+ YI +IG+Y K++NII LS I+ N + IP+ + LT LPG+GRK AN
Sbjct: 62 MLALGESGLKRYINSIGLYNSKAKNIIQLSEIIENTYGGTIPRDFDALTALPGVGRKSAN 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V L+ G+PTI VDTH+FR+SNRIGL + VE+SL +++P K + AH+WLVLHG
Sbjct: 122 VFLNSCLGVPTIAVDTHVFRVSNRIGLVQESSVLGVEKSLEKVVPEKWKLYAHHWLVLHG 181
Query: 203 RYVCKARKPQCQSCIISNLC 222
RYVCKAR P C CI+S+LC
Sbjct: 182 RYVCKARTPLCGKCIVSDLC 201
>gi|322435227|ref|YP_004217439.1| endonuclease III [Acidobacterium sp. MP5ACTX9]
gi|321162954|gb|ADW68659.1| endonuclease III [Acidobacterium sp. MP5ACTX9]
Length = 275
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 1/209 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ I +P L + N F L +A +LSAQ+TDV VNKAT LF++
Sbjct: 59 AKPLAQDRVAAILDGLRKTYPGVVCALTHRNAFELTIATILSAQTTDVGVNKATPELFKM 118
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP+K+ +++ I+T G YR K++NI + +L+ F ++P+T+ + LPG+
Sbjct: 119 YPTPKKLAEAPTLEVERLIKTTGFYRAKAKNIQGAARVLVERFGGEVPKTIAEMIELPGV 178
Query: 137 GRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
RK ANV+L +GI + + VDTH+ R+S R+ L P KVEQ L+++IP
Sbjct: 179 ARKTANVVLGSWYGIASGVVVDTHVLRLSRRLELTKNDDPVKVEQDLIKVIPQDRWIQFS 238
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ HGR VC ARKP+C C + +C
Sbjct: 239 HELIHHGRQVCIARKPRCVDCSLERVCNS 267
>gi|159030796|emb|CAO88474.1| nth [Microcystis aeruginosa PCC 7806]
Length = 218
Score = 135 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI +P L Y L+VAV+LSAQ TD VNK T LF + +
Sbjct: 12 RALEILSNLKQLYPEATCSLNYQTPVQLLVAVILSAQCTDERVNKVTPALFARFPDAKSL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++L+ IR+ G YR K++NI ++ +F ++P+T+E L LPG+ RK ANV
Sbjct: 72 AFAEREELETLIRSTGFYRNKAKNIQGACQKILKDFQGEVPKTMEELLTLPGVARKTANV 131
Query: 144 ILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ A+GI + VDTH+ R+SNR+GL P K+E L+ ++P ++ HG
Sbjct: 132 VLAHAYGIIEGVTVDTHVKRLSNRLGLTTNNDPVKIELDLMALLPQPDWETFSISIIYHG 191
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
R VCKAR P C SC +++LC
Sbjct: 192 RAVCKARNPTCFSCQLASLCPA 213
>gi|254464059|ref|ZP_05077470.1| endonuclease III [Rhodobacterales bacterium Y4I]
gi|206684967|gb|EDZ45449.1| endonuclease III [Rhodobacterales bacterium Y4I]
Length = 214
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 144/200 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F P PKGEL +VN +TL+VAV LSAQ+TD VNKAT LF+IADTPQKML
Sbjct: 10 LREIFTRFHAAEPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATHELFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+GE++L +I+TIG+YR K++N+I LS IL+ E+ ++P + L LPG+GRK ANV+
Sbjct: 70 DLGEERLIEHIKTIGLYRNKAKNVIKLSRILVEEYGGEVPNSRAALQSLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK + VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRYPAQAVDTHIFRVGNRSGICPGKDVDAVERAIEDNIPVDFQQHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C SC+I +LC
Sbjct: 190 HCKARKPMCGSCLIRDLCMY 209
>gi|154174715|ref|YP_001408065.1| endonuclease III [Campylobacter curvus 525.92]
gi|112802892|gb|EAU00236.1| endonuclease III [Campylobacter curvus 525.92]
Length = 211
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K++ +I L + K EL + + + LIV V+LSAQ TD VN T LFE
Sbjct: 1 MRSKKDISQIKSRLLLAYKDAKSELRFKSPYELIVCVMLSAQCTDKRVNLITPALFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M ++ I + + K++N+I ++ ++ E D +IP L +L G+G+
Sbjct: 61 NVKAMANANLASVKLLINSCSFFNNKAQNLIKMAKSVMAEHDGEIPLDESKLIKLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L A G + VDTH+FR+S+R+GL+ KTP E L I H +
Sbjct: 121 KTAHVVLLEATGANVMAVDTHVFRVSHRLGLSRAKTPEATEVDLSEIF-KTELGRLHQAM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VL GRY CKA+KP C CI+++LCK +
Sbjct: 180 VLFGRYTCKAQKPLCAQCILNDLCKSKDK 208
>gi|160898265|ref|YP_001563847.1| endonuclease III [Delftia acidovorans SPH-1]
gi|160363849|gb|ABX35462.1| endonuclease III [Delftia acidovorans SPH-1]
Length = 250
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 142/215 (66%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+E F P P+ EL Y N F L+ AVLLSAQ+TDV VNKA
Sbjct: 24 ATSMDTRPPTMKTTSIEPFFATLKAANPWPQTELEYTNVFELLSAVLLSAQATDVGVNKA 83
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T+ LF +A+TPQ +L +G + L+ YI+TIG+YR K+++++ IL+ ++P+T E
Sbjct: 84 TRKLFPVANTPQAILDLGLEGLEGYIKTIGLYRSKAKHLMQTCQILVERHGGQVPRTREE 143
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+GRK ANV+L++AFG PT+ VDTHIFR+ NR GLAPGKTP VE L++ +PP
Sbjct: 144 LEALPGVGRKTANVVLNVAFGEPTMAVDTHIFRVGNRTGLAPGKTPLAVEMQLMKRVPPA 203
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++H+WL+L GRYVC+ARKP+C C+++ C
Sbjct: 204 YAVDSHHWLILLGRYVCQARKPRCWECVVAPYCDY 238
>gi|307721595|ref|YP_003892735.1| endonuclease III [Sulfurimonas autotrophica DSM 16294]
gi|306979688|gb|ADN09723.1| endonuclease III [Sulfurimonas autotrophica DSM 16294]
Length = 213
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE++EI F ++ EL+Y N + L++AV LSAQ TD VN T LFE TP
Sbjct: 5 TKKEIQEIKKRFIERYSDAVTELHYKNAYELVIAVALSAQCTDKRVNLITPLLFEKYPTP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + ++ I + + K++N+I+++ ++ ++ +IP + L L G+G+K
Sbjct: 65 QDLANAAIEDVKELINSCSFFNNKAKNLIAMAKRVVEVYNGEIPMNEKDLQTLAGVGQKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+V++ G + VDTH+FR+++R+GL+ KT E +L++ + H +VL
Sbjct: 125 AHVVMIEYTGANLMAVDTHVFRVAHRLGLSDDKTAKATEATLVKKF-KTDLHVLHQAMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
GRY+C A+ P+C C ++ CK
Sbjct: 184 FGRYICTAKNPKCDECFLTQFCK 206
>gi|15843291|ref|NP_338328.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
CDC1551]
gi|254233170|ref|ZP_04926496.1| endonuclease III nth [Mycobacterium tuberculosis C]
gi|308232527|ref|ZP_07664110.1| endonuclease III nth [Mycobacterium tuberculosis SUMu001]
gi|308369190|ref|ZP_07666681.1| endonuclease III nth [Mycobacterium tuberculosis SUMu002]
gi|308371410|ref|ZP_07667156.1| endonuclease III nth [Mycobacterium tuberculosis SUMu003]
gi|308372613|ref|ZP_07667421.1| endonuclease III nth [Mycobacterium tuberculosis SUMu004]
gi|308372701|ref|ZP_07667438.1| endonuclease III nth [Mycobacterium tuberculosis SUMu005]
gi|308373777|ref|ZP_07667653.1| endonuclease III nth [Mycobacterium tuberculosis SUMu006]
gi|308374943|ref|ZP_07667904.1| endonuclease III nth [Mycobacterium tuberculosis SUMu007]
gi|308376184|ref|ZP_07668212.1| endonuclease III nth [Mycobacterium tuberculosis SUMu008]
gi|308378433|ref|ZP_07668753.1| endonuclease III nth [Mycobacterium tuberculosis SUMu009]
gi|308379576|ref|ZP_07668990.1| endonuclease III nth [Mycobacterium tuberculosis SUMu010]
gi|308380764|ref|ZP_07669279.1| endonuclease III nth [Mycobacterium tuberculosis SUMu011]
gi|308406212|ref|ZP_07669545.1| endonuclease III nth [Mycobacterium tuberculosis SUMu012]
gi|13883650|gb|AAK48142.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
CDC1551]
gi|124602963|gb|EAY61238.1| endonuclease III nth [Mycobacterium tuberculosis C]
gi|308213558|gb|EFO72957.1| endonuclease III nth [Mycobacterium tuberculosis SUMu001]
gi|308328433|gb|EFP17284.1| endonuclease III nth [Mycobacterium tuberculosis SUMu002]
gi|308328835|gb|EFP17686.1| endonuclease III nth [Mycobacterium tuberculosis SUMu003]
gi|308332674|gb|EFP21525.1| endonuclease III nth [Mycobacterium tuberculosis SUMu004]
gi|308340159|gb|EFP29010.1| endonuclease III nth [Mycobacterium tuberculosis SUMu005]
gi|308344161|gb|EFP33012.1| endonuclease III nth [Mycobacterium tuberculosis SUMu006]
gi|308347961|gb|EFP36812.1| endonuclease III nth [Mycobacterium tuberculosis SUMu007]
gi|308351893|gb|EFP40744.1| endonuclease III nth [Mycobacterium tuberculosis SUMu008]
gi|308352470|gb|EFP41321.1| endonuclease III nth [Mycobacterium tuberculosis SUMu009]
gi|308356418|gb|EFP45269.1| endonuclease III nth [Mycobacterium tuberculosis SUMu010]
gi|308360366|gb|EFP49217.1| endonuclease III nth [Mycobacterium tuberculosis SUMu011]
gi|308364065|gb|EFP52916.1| endonuclease III nth [Mycobacterium tuberculosis SUMu012]
gi|323717535|gb|EGB26737.1| endonuclease III nth [Mycobacterium tuberculosis CDC1551A]
Length = 262
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 113/234 (48%), Gaps = 9/234 (3%)
Query: 1 MVSSKKSDSYQGNSPLGCL--YTPKELEE-------IFYLFSLKWPSPKGELYYVNHFTL 51
M ++K S S ++ + + + +P EL + L
Sbjct: 1 MTAAKSSRSKPAARAADVPGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLEL 60
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
VA +LSAQSTD VN T LF T + +L++ IR G YR K+ ++I L
Sbjct: 61 AVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGL 120
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
L+ F ++P T++ L LPG+GRK ANVIL AFGIP I VDTH R+ R
Sbjct: 121 GQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTT 180
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P KVEQ++ +I K + ++ HGR VC AR+P C C+++ C
Sbjct: 181 AEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSF 234
>gi|126724954|ref|ZP_01740797.1| endonuclease III [Rhodobacterales bacterium HTCC2150]
gi|126706118|gb|EBA05208.1| endonuclease III [Rhodobacterales bacterium HTCC2150]
Length = 214
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 112/208 (53%), Positives = 149/208 (71%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L EIF F + PKGEL +VN +TL+VAV LSAQ+TDV VNKATK LF+IADT
Sbjct: 5 MPYQTLHEIFSRFQTQEAEPKGELDHVNVYTLVVAVALSAQATDVGVNKATKELFKIADT 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+KMLA+GE + +I+TIG++R K++N+I LS L++EF K+P + L LPG+GRK
Sbjct: 65 PEKMLALGEAGVIEHIKTIGLFRNKAKNVIKLSQKLVDEFGGKVPSSRAALESLPGVGRK 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+M F P VDTHIFRI NR G+ PGK VE+++ IP + Q++AH+WL+
Sbjct: 125 TANVVLNMWFHHPAQAVDTHIFRIGNRTGICPGKDVVAVERAIEDNIPVEFQHHAHHWLI 184
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVCKAR P C +CII +LC ++
Sbjct: 185 LHGRYVCKARAPVCGNCIIRDLCPFEEK 212
>gi|291458840|ref|ZP_06598230.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418094|gb|EFE91813.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
Length = 231
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P + L Y + + L+++V L+AQ TD+ V++ T L+E T + + A
Sbjct: 26 VIERLKELYPDTRCTLSYRDAWQLLISVRLAAQCTDLRVDQVTPKLYEKFPTVEAIAAAS 85
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++++ +R G+ R K+ +I + IL +++K+P+ L LPG+GRK AN+I+
Sbjct: 86 PEEIEEIVRPCGLGRSKARDISACMRILHERYEDKVPEDFGELLALPGVGRKSANLIMGD 145
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
FG P I DTH R+SNRIGL K P KVE+ L RIIPP+ + +V HGR VC
Sbjct: 146 IFGKPAIVTDTHCIRLSNRIGLVNDVKEPAKVERLLRRIIPPEESNQFCHRMVDHGRAVC 205
Query: 207 KARKPQCQSCIISNLCKRIK 226
AR PQC+ C + LC+ +
Sbjct: 206 TARSPQCEKCTLLTLCRFGR 225
>gi|228469748|ref|ZP_04054714.1| endonuclease III [Porphyromonas uenonis 60-3]
gi|228308683|gb|EEK17416.1| endonuclease III [Porphyromonas uenonis 60-3]
Length = 214
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P+ EL Y + F+L+VAV+LSAQ TD VN T L
Sbjct: 1 MTLDERYGLALEGLTKLYPNADTELIYHDPFSLLVAVVLSAQCTDKRVNMVTPQLMAHFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M L ++ ++ K++++I LS + E +P T E L LPG+GR
Sbjct: 61 TPEAMARASVDDLLAFMGSVSYPNNKAKHLIGLSERIAQEHHGVVPSTREELEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A+V+L++ F P + VDTH+FR++ RIGLA TP VEQ+L R IP + AH+
Sbjct: 121 KSASVMLAVCFDTPAMPVDTHVFRVAKRIGLASSRATTPLAVEQALRRRIPREQLIRAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+L GRY+CKARKP C C ++ C+
Sbjct: 181 QLILLGRYICKARKPLCDECTLTACCRHY 209
>gi|148546376|ref|YP_001266478.1| endonuclease III [Pseudomonas putida F1]
gi|148510434|gb|ABQ77294.1| endonuclease III [Pseudomonas putida F1]
Length = 335
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 143/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EIF P PK EL Y F L+VAV LSAQSTDV VNKAT LF +A+T
Sbjct: 124 MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 183
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + A+G + L YI+TIG+Y K++N+I +LI D+++PQT E L LPG+GRK
Sbjct: 184 PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK 243
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AF P + VDTHIFR+SNR G+APGKT +VE+ L++ +P + +AH+WL+
Sbjct: 244 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI 303
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC+ARKP+C SC I +LC+ +
Sbjct: 304 LHGRYVCQARKPRCGSCRIEDLCEYKHK 331
>gi|57238974|ref|YP_180110.1| endonuclease III [Ehrlichia ruminantium str. Welgevonden]
gi|57161053|emb|CAH57960.1| endonuclease III [Ehrlichia ruminantium str. Welgevonden]
Length = 210
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 142/208 (68%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ +F F PK EL Y N FTL+VA++LSA++TDV+VNK T LF+IADT
Sbjct: 1 MDENKINLLFSKFQEHNHYPKIELKYSNEFTLLVAIVLSARTTDVSVNKITSKLFKIADT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQKML +GE+ L+ YI TIG+Y KS+NII+LS I+IN++ +P + L LPG+GRK
Sbjct: 61 PQKMLNLGEEGLKKYINTIGLYNAKSKNIIALSSIIINQYHGMVPLEFDALVALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV L+ +PT+ VDTH+FR+SNR+GL K E +L+ +IP + AH+WLV
Sbjct: 121 SANVFLNTWLNLPTVAVDTHVFRVSNRVGLVKENNVLKTESALVNVIPEQWLLYAHHWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+CK+RKP C CI+ +LC+ +
Sbjct: 181 LHGRYICKSRKPLCSKCIVQDLCEYESK 208
>gi|188579829|ref|YP_001923274.1| endonuclease III [Methylobacterium populi BJ001]
gi|179343327|gb|ACB78739.1| endonuclease III [Methylobacterium populi BJ001]
Length = 233
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 145/198 (73%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF IADTPQKMLA+
Sbjct: 22 EIFSRLQAADPEPRSELEYINPYTLLVAVVLSAQATDKSVNLATAPLFAIADTPQKMLAL 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE++++++IRTIG++ K++N+I+LS IL++ +P+ E L LPG+G K A+V+L+
Sbjct: 82 GEEQVRHFIRTIGLFNTKAKNVIALSQILVDRHGGAVPREAEALEVLPGVGTKTASVVLN 141
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG+P I VDTHIFR+SNRI L T +KV+ L +P + NAH+WL+LHGRY C
Sbjct: 142 VAFGVPRIAVDTHIFRVSNRIPLFVAPTTDKVQAGLEARVPEPFRLNAHHWLILHGRYTC 201
Query: 207 KARKPQCQSCIISNLCKR 224
KAR+P+C C +++LC+
Sbjct: 202 KARRPECPRCALADLCRY 219
>gi|310642477|ref|YP_003947235.1| endonuclease iii [Paenibacillus polymyxa SC2]
gi|309247427|gb|ADO56994.1| Endonuclease III [Paenibacillus polymyxa SC2]
Length = 224
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
I + +P EL + N F L +AVLLSAQ +D VNK T LF+ +
Sbjct: 1 MNAATARHILDIIGTMFPDAHCELNHDNAFELTIAVLLSAQCSDQMVNKVTADLFQKYKS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ LA+ ++L+ IR IG+YR K+++I +L ILI+++ +IP + L +LPG+GRK
Sbjct: 61 PEDYLAVPLEELEQDIRRIGLYRNKAKHIHNLCRILIDQYGGEIPSEHDQLVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AF +P I VDTH+ R+S R+G A + +VE+ L++ +P H+ L
Sbjct: 121 TANVVVSTAFDVPAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEWSVTHHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ PQCQ C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQNPQCQVCPLLDVCREGKK 209
>gi|312899629|ref|ZP_07758955.1| endonuclease III [Enterococcus faecalis TX0470]
gi|311293308|gb|EFQ71864.1| endonuclease III [Enterococcus faecalis TX0470]
Length = 215
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ + I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIDKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|227499736|ref|ZP_03929836.1| DNA-(apurinic or apyrimidinic site) lyase [Anaerococcus tetradius
ATCC 35098]
gi|227218203|gb|EEI83466.1| DNA-(apurinic or apyrimidinic site) lyase [Anaerococcus tetradius
ATCC 35098]
Length = 203
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 126/200 (63%), Gaps = 1/200 (0%)
Query: 29 FYLFSLKWPSPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P L + F L+VA +LSAQSTDV VNK T +F+ +TP++
Sbjct: 1 MEILDKMYPDVDYSMLKFTTPFELLVATILSAQSTDVRVNKVTSVMFKDMNTPEQFAKAD 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
K ++NYI+T+GIY+ K++NI + S IL ++++K+P+ ++ L +LPG+GRK ANV+ S
Sbjct: 61 IKTIENYIKTVGIYKNKAKNISATSKILYKDYNSKVPKDIKELMKLPGVGRKTANVVASN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AF IP I VDTH+FR+SNR+GLA K E+ L+ I H+ L+ HGR +CK
Sbjct: 121 AFNIPAIAVDTHVFRVSNRLGLACANNVEKTEEQLMANIDKNRWRKTHHQLITHGRALCK 180
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
AR P C+ C ++ LC+ ++
Sbjct: 181 ARNPLCEECDLNVLCEYYRR 200
>gi|307268732|ref|ZP_07550100.1| endonuclease III [Enterococcus faecalis TX4248]
gi|306514860|gb|EFM83407.1| endonuclease III [Enterococcus faecalis TX4248]
Length = 215
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A ++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVDEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|166031547|ref|ZP_02234376.1| hypothetical protein DORFOR_01247 [Dorea formicigenerans ATCC
27755]
gi|166028524|gb|EDR47281.1| hypothetical protein DORFOR_01247 [Dorea formicigenerans ATCC
27755]
Length = 249
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + E+ ++P L Y + L+V+V L+AQ TD VN + L+
Sbjct: 37 SMRKKELALEVIRRLKEEYPDADCTLDYDEAWKLLVSVRLAAQCTDARVNVVVEDLYAKF 96
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++++ +R G+ + K+ +I + IL +E++ K+P + L +LPG+G
Sbjct: 97 PDVNALADAPVEEIEEIVRPCGLGKSKARDISACMKILRDEYNGKVPDDFDKLLKLPGVG 156
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
RK AN+I+ FG P I DTH R+ NRIGL P KVE +L +IIPP+ + +
Sbjct: 157 RKSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDKMKDPKKVEMALWKIIPPEEGNSFCH 216
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
LV HGR VC AR KP C C + ++CK++
Sbjct: 217 RLVNHGREVCTARTKPYCDKCCLQDICKKV 246
>gi|259417828|ref|ZP_05741747.1| endonuclease III [Silicibacter sp. TrichCH4B]
gi|259346734|gb|EEW58548.1| endonuclease III [Silicibacter sp. TrichCH4B]
Length = 214
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 145/200 (72%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L EIF F PKGEL +VN +TL+VAV LSAQ+TD VNKATK LF+IADTPQKML
Sbjct: 10 LREIFTRFQDAEAEPKGELDHVNVYTLVVAVALSAQATDAGVNKATKDLFKIADTPQKML 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ + +I+TIG+YR K++N+I LS IL++++ ++P + L LPG+GRK ANV+
Sbjct: 70 ALGEEGVIEHIKTIGLYRNKAKNVIKLSRILVDQYGGEVPCSRAALESLPGVGRKTANVV 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+M + P VDTHIFR+ NR G+ PGK N VE+++ IP Q +AH+WL+LHGRY
Sbjct: 130 LNMWWRYPAQAVDTHIFRVGNRSGICPGKDVNAVERAIEDNIPVDFQLHAHHWLILHGRY 189
Query: 205 VCKARKPQCQSCIISNLCKR 224
CKARKP C +CII +LC
Sbjct: 190 HCKARKPLCSTCIIRDLCLY 209
>gi|209525884|ref|ZP_03274419.1| endonuclease III [Arthrospira maxima CS-328]
gi|209493693|gb|EDZ94013.1| endonuclease III [Arthrospira maxima CS-328]
Length = 217
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+ +P L Y L+VA +LSAQ TD VN+ T LF+ +
Sbjct: 12 RALEVLVRLKRLYPDAACTLNYETPLQLLVATILSAQCTDERVNQVTPALFKRFPDAFSL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++L+ +R+ G YR K+ +I S ++ +F ++P+ +E L LPG+ RK ANV
Sbjct: 72 ATADLQELETLVRSTGFYRNKARHIKESSRMIAEKFGGEVPKRMEQLLELPGVARKTANV 131
Query: 144 ILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+++ A+GI + VDTH+ R+S R+GL K P ++E+ L++++P N L+ HG
Sbjct: 132 VMANAYGINMGVTVDTHVRRLSQRLGLTQHKDPVRIERDLMQVLPQPDWENWSIRLIYHG 191
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
R +C AR P C +C +S+LC +
Sbjct: 192 RGICTARNPACYNCKLSDLCPSAQ 215
>gi|52080742|ref|YP_079533.1| endonuclease III [Bacillus licheniformis ATCC 14580]
gi|52786113|ref|YP_091942.1| hypothetical protein BLi02369 [Bacillus licheniformis ATCC 14580]
gi|319645300|ref|ZP_07999533.1| nth protein [Bacillus sp. BT1B_CT2]
gi|52003953|gb|AAU23895.1| endonuclease III [Bacillus licheniformis ATCC 14580]
gi|52348615|gb|AAU41249.1| Nth [Bacillus licheniformis ATCC 14580]
gi|317393109|gb|EFV73903.1| nth protein [Bacillus sp. BT1B_CT2]
Length = 220
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++E +P + EL + N F L++AV LSAQ TD VNK TK LF+
Sbjct: 1 MLTKKQIEFCLDTIGEMFPDAECELVHDNPFELVIAVALSAQCTDALVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ I++IG+YR K++NI L +L+ ++ ++P+ + L +LPG+GR
Sbjct: 61 KPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLCKMLLEDYGGEVPRDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVMEVEKTLMKKVPESEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA++P+C+ C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQRPKCEECPLFSLCREGQK 210
>gi|315174673|gb|EFU18690.1| endonuclease III [Enterococcus faecalis TX1346]
Length = 215
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 78/210 (37%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ FG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDVFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|226363643|ref|YP_002781425.1| endonuclease III [Rhodococcus opacus B4]
gi|226242132|dbj|BAH52480.1| putative endonuclease III [Rhodococcus opacus B4]
Length = 251
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 101/194 (52%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + L VA +LSAQ TDV VN T LF + +L
Sbjct: 30 LAEAFPHVYCELDFTTPLDLAVATILSAQCTDVRVNMVTPALFARYPDAKAYAEAERTEL 89
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ YIR+ G YR K+ ++I L L+ FD ++P L+ L LPGIGRK ANVIL AF +
Sbjct: 90 EEYIRSTGFYRNKTNSLIGLGQALLERFDGEVPGNLKDLVTLPGIGRKTANVILGNAFDV 149
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R + P KVE ++ +I K + ++ HGR VC ARKP
Sbjct: 150 PGITVDTHFGRLVRRWKWTEEEDPVKVEHAIGALIERKEWTLLSHRVIFHGRRVCHARKP 209
Query: 212 QCQSCIISNLCKRI 225
C C+++ C
Sbjct: 210 ACGVCVLAGDCPSY 223
>gi|78213015|ref|YP_381794.1| endonuclease III [Synechococcus sp. CC9605]
gi|78197474|gb|ABB35239.1| endonuclease III [Synechococcus sp. CC9605]
Length = 217
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 114/201 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E I ++P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRRSERVEVILQRLHEQYPETPVPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A+ E+++ +IR +G+ + K+ N+ L+ IL+ +D +PQ+ E L LPG+G
Sbjct: 61 TPAAMAALEEEQILAFIRQLGLAKTKARNVRRLAQILVAAYDGDVPQSFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + EQ L R+ P +H H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSDGSSVARTEQDLKRLFPKEHWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ GR C AR C +
Sbjct: 181 IFWGREFCTARGCDGTVCPMC 201
>gi|81428527|ref|YP_395527.1| putative DNA repair protein, endonuclease III [Lactobacillus sakei
subsp. sakei 23K]
gi|78610169|emb|CAI55218.1| Putative DNA repair protein, endonuclease III [Lactobacillus sakei
subsp. sakei 23K]
Length = 216
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + P KG L + F L++AV+LSAQ+TDV+VNK T LFE
Sbjct: 1 MLSKAKTRWAMTQLYDLIPDAKGALIADSPFQLLIAVMLSAQATDVSVNKVTPQLFEHFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP A ++ IR+IG+Y K+++I + LI +F ++PQT L +L G+GR
Sbjct: 61 TPASFAAADLTAIEADIRSIGLYHNKAKHIRTCCQQLITDFGGEVPQTHAELEQLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AF +P+ VDTH+ RI+ R+ + A + ++E +P K AH+
Sbjct: 121 KTANVVLGDAFNVPSFAVDTHVSRIAKRLTISAENASVRQIETDFQTKLPQKEWVQAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+L GR VC AR P+C C + ++C ++
Sbjct: 181 LILFGRQVCTARNPKCNQCPLLSICPAGQR 210
>gi|302037773|ref|YP_003798095.1| endonuclease III [Candidatus Nitrospira defluvii]
gi|300605837|emb|CBK42170.1| Endonuclease III [Candidatus Nitrospira defluvii]
Length = 223
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 111/205 (54%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L I P+ EL + + L+VA +LSAQ TD VN+ T +LF P +
Sbjct: 16 RRLARILTALRATSPAMNVELDHRTPWELLVATILSAQCTDQRVNQVTPNLFRRYQHPHE 75
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +L+ IR G ++ K+ N+I + + +F ++P T+E LT LPG+GRK AN
Sbjct: 76 YASADPAELEALIRPTGFFKTKARNLIRCAKTVAEQFHGEVPDTMEALTTLPGVGRKTAN 135
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L AF P I VDTH+ R++ R+ L P K+E L R++P L+LHG
Sbjct: 136 VLLGNAFEKPAIVVDTHVKRVAGRLDLTRHTDPEKIEMDLQRLLPADQWTEGSQRLLLHG 195
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY+C AR P+C+ C I C+ +
Sbjct: 196 RYICLARTPKCRHCPIYADCRWKGK 220
>gi|325263222|ref|ZP_08129957.1| endonuclease III [Clostridium sp. D5]
gi|324031615|gb|EGB92895.1| endonuclease III [Clostridium sp. D5]
Length = 212
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKQELALEVIERLKKEYPDADCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEDLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ + K+ +I + IL E++ IP+T L +LPG+GR
Sbjct: 61 DVDALAEADVEEIERIVRPCGLGKSKARDISACMKILKEEYEGGIPKTFNELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL G K P KVE L +IIPPK + +
Sbjct: 121 KSANLIMGDVFGEPAIVTDTHCIRLVNRMGLVDGLKDPKKVEMELWKIIPPKEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C C ++++C
Sbjct: 181 LVYHGRDVCTARTKPHCDKCCLADIC 206
>gi|332299912|ref|YP_004441833.1| endonuclease III [Porphyromonas asaccharolytica DSM 20707]
gi|332176975|gb|AEE12665.1| endonuclease III [Porphyromonas asaccharolytica DSM 20707]
Length = 219
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P+ EL Y + F+L+VAV+LSAQ TD VN T L
Sbjct: 1 MTLDERYRLALEGLAQLYPNADTELIYHDPFSLLVAVVLSAQCTDKRVNMVTPQLMAHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M L ++ ++ K++++I LS + + +P T E L LPG+GR
Sbjct: 61 TPEAMARASVDDLLAFMGSVSYPNNKAKHLIGLSERITQKHHGIVPSTREELEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A+V+L++ F P + VDTH++R++ RIGLA TP VEQ+L++ IP AH+
Sbjct: 121 KSASVMLAVCFETPAMPVDTHVYRVAKRIGLASSRATTPLAVEQALVKRIPQAQLIRAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+L GRY+CKARKP C C + C+
Sbjct: 181 QLILLGRYICKARKPLCAECTLHACCRHY 209
>gi|282898312|ref|ZP_06306303.1| Endonuclease III/Nth [Raphidiopsis brookii D9]
gi|281196843|gb|EFA71748.1| Endonuclease III/Nth [Raphidiopsis brookii D9]
Length = 218
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 1/212 (0%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
GN + L EI +P L Y L+VA +LSAQ TD VNK T
Sbjct: 2 GNKKISKLSKRGLALEILSRLYRLYPDATCSLNYQTPVQLLVATILSAQCTDERVNKVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF Q + +L+N + + G YR K++NI S +++++F++ +P +E L
Sbjct: 62 DLFGRFPDVQSLAEADVLELENLVHSTGFYRNKAKNIKSACTMIVSDFNSTVPNKMEDLL 121
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+ RK ANV+L+ A+GI + VDTH+ R++ R+GL P +E+ L+ ++P
Sbjct: 122 KLPGVARKTANVVLAHAYGINAGVTVDTHVKRLTQRLGLTASTEPISIEKDLMELLPQPE 181
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
N L+ HGR VCKAR P C+SC + ++C
Sbjct: 182 WENWSIRLIYHGRAVCKARSPSCESCDLVDVC 213
>gi|169350613|ref|ZP_02867551.1| hypothetical protein CLOSPI_01384 [Clostridium spiroforme DSM 1552]
gi|169292667|gb|EDS74800.1| hypothetical protein CLOSPI_01384 [Clostridium spiroforme DSM 1552]
Length = 214
Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 124/210 (59%), Gaps = 2/210 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + +P EL + + F L+VAV+LSAQ+TD VN+ TK LF+
Sbjct: 1 MNKEKTTRVLNYLEELFPDAYCELNHDSDFQLLVAVMLSAQTTDKKVNELTKDLFKKYPD 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M +LQ I+TIG+YR K++N++++S +LI+++D K+P + L LPG+GRK
Sbjct: 61 VKTMSQASLIQLQEDIKTIGLYRNKAKNLLAMSKMLIDKYDGKVPSVQKELESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+ S+AF IP VDTH+ RIS R+G A VE+ L R IP + AH+
Sbjct: 121 TANVVRSVAFDIPAFAVDTHVERISKRLGFAKKDDNVLNVEKKLCRSIPKERWNKAHHQF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK-RIKQ 227
+ GRY CKA P C+ C + ++CK IK+
Sbjct: 181 IFFGRYFCKATNPNCKECKLFDMCKDSIKK 210
>gi|282880796|ref|ZP_06289492.1| endonuclease III [Prevotella timonensis CRIS 5C-B1]
gi|281305330|gb|EFA97394.1| endonuclease III [Prevotella timonensis CRIS 5C-B1]
Length = 216
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F P EL + + F L+VA LLSAQ TD +N+ T LF
Sbjct: 1 MTRKERYKFILDYFKEISPEVTTELEFGSAFQLLVATLLSAQCTDKRINQVTPALFARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M + + Y+R++ KS++++ ++ +L+ +FD ++P L +LPG+GR
Sbjct: 61 DAPSMAQATAEDIFTYVRSVSYPNSKSKHLVEMAQMLVRDFDGEVPDNTTDLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ +G I VDTH++R+S+R+GL TP KVE L++ IP +AH+
Sbjct: 121 KTANVVQAVWYGKAKIAVDTHVYRVSHRLGLVSQKSNTPLKVELDLMKYIPEADVSSAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRY+C++ +P+C+ C +C ++
Sbjct: 181 WLLLHGRYICQSLRPKCEKCPFEAICPKL 209
>gi|239625177|ref|ZP_04668208.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519407|gb|EEQ59273.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 211
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI ++P L Y + L+V+V L+AQ TD VN K L+E
Sbjct: 1 MTKEELALEIIKRLKKEYPDAGCTLDYNQAWKLLVSVRLAAQCTDARVNVVVKELYERYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++ ++ G+ K+ +I + IL E+ ++P + L +LPG+GR
Sbjct: 61 DVGALAEAKVEDIERIVKPCGLGHSKARDISACMKILQEEYGGRVPDDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NR+GL G P KVE +L +++P K + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKLVPAKEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR +P C +C +S++C
Sbjct: 181 LVYHGRDVCTARTRPHCDACCLSDIC 206
>gi|289747510|ref|ZP_06506888.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
02_1987]
gi|294995420|ref|ZP_06801111.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis 210]
gi|289688038|gb|EFD55526.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
02_1987]
gi|326905510|gb|EGE52443.1| endonuclease III nth [Mycobacterium tuberculosis W-148]
Length = 245
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 103/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P EL + L VA +LSAQSTD VN T LF T +
Sbjct: 22 RALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRT 81
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L++ IR G YR K+ ++I L L+ F ++P T++ L LPG+GRK ANVIL AF
Sbjct: 82 ELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAF 141
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I VDTH R+ R + P KVEQ++ +I K + ++ HGR VC AR
Sbjct: 142 GIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHAR 201
Query: 210 KPQCQSCIISNLCKRI 225
+P C C+++ C
Sbjct: 202 RPACGVCVLAKDCPSF 217
>gi|215405723|ref|ZP_03417904.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
02_1987]
gi|215413599|ref|ZP_03422267.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
94_M4241A]
gi|215424915|ref|ZP_03422834.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis T92]
gi|215432649|ref|ZP_03430568.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
EAS054]
gi|218755454|ref|ZP_03534250.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis GM
1503]
gi|219559750|ref|ZP_03538826.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis T17]
gi|254552785|ref|ZP_05143232.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 226
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 103/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P EL + L VA +LSAQSTD VN T LF T +
Sbjct: 3 RALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRT 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L++ IR G YR K+ ++I L L+ F ++P T++ L LPG+GRK ANVIL AF
Sbjct: 63 ELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAF 122
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I VDTH R+ R + P KVEQ++ +I K + ++ HGR VC AR
Sbjct: 123 GIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHAR 182
Query: 210 KPQCQSCIISNLCKRI 225
+P C C+++ C
Sbjct: 183 RPACGVCVLAKDCPSF 198
>gi|31794844|ref|NP_857337.1| endonuclease III [Mycobacterium bovis AF2122/97]
gi|57117142|ref|NP_218191.2| endonuclease III [Mycobacterium tuberculosis H37Rv]
gi|121639587|ref|YP_979811.1| putative endonuclease III nth [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663537|ref|YP_001285060.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
H37Ra]
gi|148824878|ref|YP_001289632.1| endonuclease III nth [Mycobacterium tuberculosis F11]
gi|167970825|ref|ZP_02553102.1| endonuclease III nth [Mycobacterium tuberculosis H37Ra]
gi|224992083|ref|YP_002646772.1| putative endonuclease III [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800717|ref|YP_003033718.1| endonuclease III nth [Mycobacterium tuberculosis KZN 1435]
gi|254366219|ref|ZP_04982263.1| endonuclease III nth [Mycobacterium tuberculosis str. Haarlem]
gi|260184592|ref|ZP_05762066.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
CPHL_A]
gi|260198716|ref|ZP_05766207.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis T46]
gi|260202872|ref|ZP_05770363.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis K85]
gi|289441106|ref|ZP_06430850.1| endonuclease III nth [Mycobacterium tuberculosis T46]
gi|289445270|ref|ZP_06435014.1| endonuclease III nth [Mycobacterium tuberculosis CPHL_A]
gi|289555937|ref|ZP_06445147.1| endonuclease III nth [Mycobacterium tuberculosis KZN 605]
gi|289571914|ref|ZP_06452141.1| endonuclease III nth [Mycobacterium tuberculosis T17]
gi|289572322|ref|ZP_06452549.1| endonuclease III nth [Mycobacterium tuberculosis K85]
gi|289748187|ref|ZP_06507565.1| endonuclease III nth [Mycobacterium tuberculosis T92]
gi|289755800|ref|ZP_06515178.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
EAS054]
gi|289763852|ref|ZP_06523230.1| endonuclease III nth [Mycobacterium tuberculosis GM 1503]
gi|297636350|ref|ZP_06954130.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis KZN
4207]
gi|297733344|ref|ZP_06962462.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis KZN
R506]
gi|298527148|ref|ZP_07014557.1| endonuclease III nth [Mycobacterium tuberculosis 94_M4241A]
gi|313660675|ref|ZP_07817555.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis KZN
V2475]
gi|54037049|sp|P63541|END3_MYCBO RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|54040808|sp|P63540|END3_MYCTU RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|31620441|emb|CAD95884.1| PROBABLE ENDONUCLEASE III NTH (DNA-(APURINIC OR APYRIMIDINIC
SITE)LYASE) (AP LYASE) (AP ENDONUCLEASE CLASS I)
(ENDODEOXYRIBONUCLEASE (APURINIC OR APYRIMIDINIC))
(DEOXYRIBONUCLEASE (APURINIC OR APYRIMIDINIC))
[Mycobacterium bovis AF2122/97]
gi|48596285|emb|CAA17996.2| PROBABLE ENDONUCLEASE III NTH (DNA-(APURINIC OR APYRIMIDINIC
SITE)LYASE) (AP LYASE) (AP ENDONUCLEASE CLASS I)
(ENDODEOXYRIBONUCLEASE (APURINIC OR APYRIMIDINIC))
(DEOXYRIBONUCLEASE (APURINIC OR APYRIMIDINIC))
[Mycobacterium tuberculosis H37Rv]
gi|121495235|emb|CAL73721.1| Probable endonuclease III nth [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|134151731|gb|EBA43776.1| endonuclease III nth [Mycobacterium tuberculosis str. Haarlem]
gi|148507689|gb|ABQ75498.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
H37Ra]
gi|148723405|gb|ABR08030.1| endonuclease III nth [Mycobacterium tuberculosis F11]
gi|224775198|dbj|BAH28004.1| putative endonuclease III [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322220|gb|ACT26823.1| endonuclease III nth [Mycobacterium tuberculosis KZN 1435]
gi|289414025|gb|EFD11265.1| endonuclease III nth [Mycobacterium tuberculosis T46]
gi|289418228|gb|EFD15429.1| endonuclease III nth [Mycobacterium tuberculosis CPHL_A]
gi|289440569|gb|EFD23062.1| endonuclease III nth [Mycobacterium tuberculosis KZN 605]
gi|289536753|gb|EFD41331.1| endonuclease III nth [Mycobacterium tuberculosis K85]
gi|289545668|gb|EFD49316.1| endonuclease III nth [Mycobacterium tuberculosis T17]
gi|289688774|gb|EFD56203.1| endonuclease III nth [Mycobacterium tuberculosis T92]
gi|289696387|gb|EFD63816.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis
EAS054]
gi|289711358|gb|EFD75374.1| endonuclease III nth [Mycobacterium tuberculosis GM 1503]
gi|298496942|gb|EFI32236.1| endonuclease III nth [Mycobacterium tuberculosis 94_M4241A]
gi|328460446|gb|AEB05869.1| endonuclease III nth [Mycobacterium tuberculosis KZN 4207]
Length = 245
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 103/196 (52%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P EL + L VA +LSAQSTD VN T LF T +
Sbjct: 22 RALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRT 81
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L++ IR G YR K+ ++I L L+ F ++P T++ L LPG+GRK ANVIL AF
Sbjct: 82 ELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAF 141
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
GIP I VDTH R+ R + P KVEQ++ +I K + ++ HGR VC AR
Sbjct: 142 GIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHAR 201
Query: 210 KPQCQSCIISNLCKRI 225
+P C C+++ C
Sbjct: 202 RPACGVCVLAKDCPSF 217
>gi|85706179|ref|ZP_01037274.1| endonuclease III [Roseovarius sp. 217]
gi|85669343|gb|EAQ24209.1| endonuclease III [Roseovarius sp. 217]
Length = 214
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 141/196 (71%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EIF F P P GEL +VN +TL+VAV LSAQ+TDV VN+AT+ LF+IADTPQKML +
Sbjct: 12 EIFTRFQAAEPEPMGELDHVNAYTLVVAVALSAQATDVGVNRATRDLFKIADTPQKMLDL 71
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
GE+ L +I+TIG+YR K+++++ LS IL+ ++ +P + L LPG+GRK ANV+L+
Sbjct: 72 GEEGLIQHIKTIGLYRNKAKHVMKLSRILVEDYGGCVPNSRAALQSLPGVGRKTANVVLN 131
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
M + P VDTHIFR+ NR G+ PG+ VE+++ +P Q +AH+WL+LHGRY C
Sbjct: 132 MWWHYPAQAVDTHIFRVGNRSGIGPGRDVVAVERAIEDNVPVGFQRHAHHWLILHGRYTC 191
Query: 207 KARKPQCQSCIISNLC 222
KARKP C +C+I +LC
Sbjct: 192 KARKPACGTCLIRDLC 207
>gi|294791208|ref|ZP_06756365.1| endonuclease III [Scardovia inopinata F0304]
gi|294457679|gb|EFG26033.1| endonuclease III [Scardovia inopinata F0304]
Length = 210
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 5/202 (2%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +P P+ L + N F L++A ++SAQ+TDV VNK T LF TPQ +
Sbjct: 5 YDILRQVYPHPQSALNFRNAFELLIATMMSAQTTDVQVNKVTPELFNRYPTPQALAQAHV 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ ++ IRTIG + K++ I ++H L+ FD ++P T+E LT LPG+GRK ANV+L A
Sbjct: 65 QDVEQIIRTIGFFHTKAQRAIMIAHELLTRFDGQVPATMEELTSLPGVGRKTANVVLGNA 124
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F +P VDTH+ R++ R+ P K+E + PP + + L+ GR
Sbjct: 125 FDLPGFPVDTHVIRVTGRLHWRSDWRTAKGDPEKIETEITAAFPPSEWKDLSHRLINLGR 184
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C ARKP+C C + C
Sbjct: 185 DTCHARKPECLVCPVRESCPSF 206
>gi|29375731|ref|NP_814885.1| endonuclease III [Enterococcus faecalis V583]
gi|227518409|ref|ZP_03948458.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
TX0104]
gi|227552941|ref|ZP_03982990.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
HH22]
gi|229550352|ref|ZP_04439077.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
ATCC 29200]
gi|255973123|ref|ZP_05423709.1| endonuclease III/Nth [Enterococcus faecalis T1]
gi|255976166|ref|ZP_05426752.1| endonuclease III/Nth [Enterococcus faecalis T2]
gi|256618739|ref|ZP_05475585.1| endonuclease III/Nth [Enterococcus faecalis ATCC 4200]
gi|256762163|ref|ZP_05502743.1| endonuclease III [Enterococcus faecalis T3]
gi|256958651|ref|ZP_05562822.1| endonuclease III/Nth [Enterococcus faecalis DS5]
gi|256962250|ref|ZP_05566421.1| endonuclease III/Nth [Enterococcus faecalis Merz96]
gi|256965444|ref|ZP_05569615.1| endonuclease III/Nth [Enterococcus faecalis HIP11704]
gi|257077995|ref|ZP_05572356.1| endonuclease III/Nth [Enterococcus faecalis JH1]
gi|257082883|ref|ZP_05577244.1| endonuclease III [Enterococcus faecalis E1Sol]
gi|257085585|ref|ZP_05579946.1| endonuclease III/Nth [Enterococcus faecalis Fly1]
gi|257086509|ref|ZP_05580870.1| endonuclease III/Nth [Enterococcus faecalis D6]
gi|257089566|ref|ZP_05583927.1| endonuclease III [Enterococcus faecalis CH188]
gi|257415773|ref|ZP_05592767.1| endonuclease III/Nth [Enterococcus faecalis AR01/DG]
gi|257418983|ref|ZP_05595977.1| endonuclease III/Nth [Enterococcus faecalis T11]
gi|257422928|ref|ZP_05599918.1| endonuclease III [Enterococcus faecalis X98]
gi|293383279|ref|ZP_06629194.1| endonuclease III [Enterococcus faecalis R712]
gi|293387564|ref|ZP_06632113.1| endonuclease III [Enterococcus faecalis S613]
gi|294781025|ref|ZP_06746377.1| endonuclease III [Enterococcus faecalis PC1.1]
gi|300859914|ref|ZP_07106002.1| endonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|307274543|ref|ZP_07555723.1| endonuclease III [Enterococcus faecalis TX2134]
gi|307278810|ref|ZP_07559873.1| endonuclease III [Enterococcus faecalis TX0860]
gi|312903687|ref|ZP_07762863.1| endonuclease III [Enterococcus faecalis TX0635]
gi|312905786|ref|ZP_07764806.1| endonuclease III [Enterococcus faecalis DAPTO 512]
gi|312909159|ref|ZP_07768018.1| endonuclease III [Enterococcus faecalis DAPTO 516]
gi|312951406|ref|ZP_07770304.1| endonuclease III [Enterococcus faecalis TX0102]
gi|29343192|gb|AAO80955.1| endonuclease III [Enterococcus faecalis V583]
gi|227074087|gb|EEI12050.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
TX0104]
gi|227177911|gb|EEI58883.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
HH22]
gi|229304474|gb|EEN70470.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
ATCC 29200]
gi|255964141|gb|EET96617.1| endonuclease III/Nth [Enterococcus faecalis T1]
gi|255969038|gb|EET99660.1| endonuclease III/Nth [Enterococcus faecalis T2]
gi|256598266|gb|EEU17442.1| endonuclease III/Nth [Enterococcus faecalis ATCC 4200]
gi|256683414|gb|EEU23109.1| endonuclease III [Enterococcus faecalis T3]
gi|256949147|gb|EEU65779.1| endonuclease III/Nth [Enterococcus faecalis DS5]
gi|256952746|gb|EEU69378.1| endonuclease III/Nth [Enterococcus faecalis Merz96]
gi|256955940|gb|EEU72572.1| endonuclease III/Nth [Enterococcus faecalis HIP11704]
gi|256986025|gb|EEU73327.1| endonuclease III/Nth [Enterococcus faecalis JH1]
gi|256990913|gb|EEU78215.1| endonuclease III [Enterococcus faecalis E1Sol]
gi|256993615|gb|EEU80917.1| endonuclease III/Nth [Enterococcus faecalis Fly1]
gi|256994539|gb|EEU81841.1| endonuclease III/Nth [Enterococcus faecalis D6]
gi|256998378|gb|EEU84898.1| endonuclease III [Enterococcus faecalis CH188]
gi|257157601|gb|EEU87561.1| endonuclease III/Nth [Enterococcus faecalis ARO1/DG]
gi|257160811|gb|EEU90771.1| endonuclease III/Nth [Enterococcus faecalis T11]
gi|257164752|gb|EEU94712.1| endonuclease III [Enterococcus faecalis X98]
gi|291079302|gb|EFE16666.1| endonuclease III [Enterococcus faecalis R712]
gi|291083074|gb|EFE20037.1| endonuclease III [Enterococcus faecalis S613]
gi|294451971|gb|EFG20421.1| endonuclease III [Enterococcus faecalis PC1.1]
gi|295112731|emb|CBL31368.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Enterococcus sp. 7L76]
gi|300850732|gb|EFK78481.1| endonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|306504481|gb|EFM73688.1| endonuclease III [Enterococcus faecalis TX0860]
gi|306508695|gb|EFM77785.1| endonuclease III [Enterococcus faecalis TX2134]
gi|310628125|gb|EFQ11408.1| endonuclease III [Enterococcus faecalis DAPTO 512]
gi|310630666|gb|EFQ13949.1| endonuclease III [Enterococcus faecalis TX0102]
gi|310633040|gb|EFQ16323.1| endonuclease III [Enterococcus faecalis TX0635]
gi|311290583|gb|EFQ69139.1| endonuclease III [Enterococcus faecalis DAPTO 516]
gi|315028111|gb|EFT40043.1| endonuclease III [Enterococcus faecalis TX2137]
gi|315031632|gb|EFT43564.1| endonuclease III [Enterococcus faecalis TX0017]
gi|315034925|gb|EFT46857.1| endonuclease III [Enterococcus faecalis TX0027]
gi|315144668|gb|EFT88684.1| endonuclease III [Enterococcus faecalis TX2141]
gi|315148491|gb|EFT92507.1| endonuclease III [Enterococcus faecalis TX4244]
gi|315150361|gb|EFT94377.1| endonuclease III [Enterococcus faecalis TX0012]
gi|315153677|gb|EFT97693.1| endonuclease III [Enterococcus faecalis TX0031]
gi|315156505|gb|EFU00522.1| endonuclease III [Enterococcus faecalis TX0043]
gi|315158331|gb|EFU02348.1| endonuclease III [Enterococcus faecalis TX0312]
gi|315160901|gb|EFU04918.1| endonuclease III [Enterococcus faecalis TX0645]
gi|315168422|gb|EFU12439.1| endonuclease III [Enterococcus faecalis TX1341]
gi|315171005|gb|EFU15022.1| endonuclease III [Enterococcus faecalis TX1342]
gi|315573746|gb|EFU85937.1| endonuclease III [Enterococcus faecalis TX0309B]
gi|315577515|gb|EFU89706.1| endonuclease III [Enterococcus faecalis TX0630]
gi|315582639|gb|EFU94830.1| endonuclease III [Enterococcus faecalis TX0309A]
gi|323480393|gb|ADX79832.1| endonuclease III [Enterococcus faecalis 62]
gi|327534785|gb|AEA93619.1| endonuclease III [Enterococcus faecalis OG1RF]
Length = 215
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|78779194|ref|YP_397306.1| putative endonuclease [Prochlorococcus marinus str. MIT 9312]
gi|78712693|gb|ABB49870.1| endonuclease III [Prochlorococcus marinus str. MIT 9312]
Length = 217
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 118/201 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N +TL+VAV+LSAQSTD VN+ TK+LF++AD
Sbjct: 1 MRKAERAEIIRKELKNLYPSPPIPLDHSNAYTLLVAVVLSAQSTDKKVNELTKNLFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+KM+ +G + YI+ +G+ +KS+NI +LS +LI + + +P T E L LPG+G
Sbjct: 61 NPEKMVNLGINGIYEYIKFLGLSNQKSKNIYNLSKLLIEKHKSIVPNTFEKLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F IP+ VDTHI R+S R GL+ G + + E+ L +I P H +
Sbjct: 121 KTASVVMSQVFKIPSFPVDTHIHRLSQRWGLSNGDSVVQTEKDLKKIFPVNEWNTLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ GR C AR C +
Sbjct: 181 IFFGREYCTARGCDGTKCYLC 201
>gi|87311493|ref|ZP_01093612.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
gi|87285749|gb|EAQ77664.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
Length = 219
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 1/212 (0%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
L K+ + + +P + L Y + L++A +LSAQ TD+ VN TK
Sbjct: 2 PKKLSLEDRKKQARRVVKQLASDYPIAECALNYETPYQLLIATILSAQCTDIRVNIVTKE 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF T +++ A+ K++ +++ G +R K++NI + S L++ +D ++P L+ L
Sbjct: 62 LFAKYPTAEEIAALPIAKIEKLVQSTGFFRNKAKNIKAASQELVDAYDGQVPADLDALVA 121
Query: 133 LPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+GRK ANV+L AFGIPT + VDTH+ R+S R+GL KVE L++++P K
Sbjct: 122 LPGVGRKTANVVLGTAFGIPTGVVVDTHVGRLSRRMGLTAQVDAVKVESELIQLLPQKEW 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ HGR +C ARKP+C C C
Sbjct: 182 IQFSHRMIHHGRAICDARKPKCDQCHFMKFCP 213
>gi|167761558|ref|ZP_02433685.1| hypothetical protein CLOSCI_03969 [Clostridium scindens ATCC 35704]
gi|167661224|gb|EDS05354.1| hypothetical protein CLOSCI_03969 [Clostridium scindens ATCC 35704]
Length = 215
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + L+
Sbjct: 1 MMKEQLAVEVIERLKKEYPDAGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEDLYARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A + ++ +R G+ + K+ +I + IL E+D KIP+ L +LPG+GR
Sbjct: 61 DVEALAAADVEDIERIVRPCGLGKSKARDISACMKILKEEYDGKIPRDFNALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R++NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGEPAIVTDTHCIRLTNRIGLVDGIKDPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR +C AR KP C C + ++C
Sbjct: 181 LVYHGRDICTARTKPFCDRCCLEDIC 206
>gi|126696201|ref|YP_001091087.1| putative endonuclease [Prochlorococcus marinus str. MIT 9301]
gi|126543244|gb|ABO17486.1| putative endonuclease [Prochlorococcus marinus str. MIT 9301]
Length = 217
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 119/201 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N +TL+VAV+LSAQSTD VN+ TK LF++AD
Sbjct: 1 MRKSERAEIIRKELKKLYPSPPIPLDHTNAYTLLVAVVLSAQSTDKKVNELTKRLFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+KM+ +G + YI+ +G+ +KS+NI +LS +LI + + K+P + E L LPG+G
Sbjct: 61 NPEKMIQLGINGIYEYIKFLGLSNQKSKNIFNLSKLLIEKHNGKVPNSFEKLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F IP+ VDTHI R+S R GL+ G + + E+ L +I P H +
Sbjct: 121 KTASVVMSQVFKIPSFPVDTHIHRLSQRWGLSNGDSVVQTEKDLKKIFPVNDWNTLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTKCYLC 201
>gi|254449397|ref|ZP_05062837.1| endonuclease III [gamma proteobacterium HTCC5015]
gi|198261002|gb|EDY85307.1| endonuclease III [gamma proteobacterium HTCC5015]
Length = 217
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 109/201 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P L + + +TL++AVLLSAQ TD VN+ T LF +AD
Sbjct: 1 MLKKERADYVLNKLQALYPETPIPLDHKDEYTLLIAVLLSAQCTDERVNQVTPALFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM+ + ++N I+ G+ +KS I LS IL+ + D +P++ L LPG+G
Sbjct: 61 TPQKMVKQSVESIRNIIKPCGLSPRKSAAIHRLSEILLEQHDGHVPESFSELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG P VDTHI R++ R GL+ G+ + E L ++ P + H +
Sbjct: 121 KTASVVMSQGFGHPAFPVDTHIHRLAQRWGLSKGRNVEQTEADLKKLFPEAYWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IYYGREYCTARGCDGTVCPMC 201
>gi|307288541|ref|ZP_07568525.1| endonuclease III [Enterococcus faecalis TX0109]
gi|306500448|gb|EFM69781.1| endonuclease III [Enterococcus faecalis TX0109]
gi|315165565|gb|EFU09582.1| endonuclease III [Enterococcus faecalis TX1302]
Length = 215
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++L GRY C AR P+C++C + +C+ K+
Sbjct: 181 MILFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|281356952|ref|ZP_06243442.1| endonuclease III [Victivallis vadensis ATCC BAA-548]
gi|281316510|gb|EFB00534.1| endonuclease III [Victivallis vadensis ATCC BAA-548]
Length = 212
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 120/206 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +++ + L + + F L+VAV+LSAQ D VN+ TK LF +A
Sbjct: 1 MASSAQWRKLYDGLYKLYGDCTCPLKHASPFQLLVAVMLSAQCRDDRVNEVTKELFAVAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M + +++ IRT G+YR KSEN+ + + L++EF ++P T+E LT LPGIGR
Sbjct: 61 DPASMAELPVERIAEIIRTCGLYRNKSENLSACAKKLVDEFGGEVPHTMEELTTLPGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L AF IP VDTH+ R+ NRIGL P K+E +PP+ N + L
Sbjct: 121 KSANVVLGDAFKIPGFPVDTHVNRLLNRIGLVDCDDPVKIEAEQNAKVPPELWSNFSHIL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ HGR VC ARKP C C I +CKR
Sbjct: 181 IQHGRRVCDARKPACDRCTIRPICKR 206
>gi|51473913|ref|YP_067670.1| AP endonuclease class I. [Rickettsia typhi str. Wilmington]
gi|59797722|sp|Q68W04|END3_RICTY RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|51460225|gb|AAU04188.1| AP endonuclease class I [Rickettsia typhi str. Wilmington]
Length = 212
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 144/201 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +IF +FS P P+ L Y N FTL+VAV+LSA++TD++VN TKHLFE +TP+K+L
Sbjct: 6 VNKIFEIFSKNNPKPQTALIYKNDFTLLVAVILSARATDISVNLVTKHLFETYNTPEKIL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+GE+ L+ YI++IG++ K++NII+ ILI + IP + L +LPG+GRK ANV+
Sbjct: 66 ALGEEGLKKYIKSIGLFNSKAKNIIASCQILIKNYQASIPNDFKELVKLPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ F +PT+ VDTH+FR+S RIGLA G T VE+ LL+II K +AH+WLVLHGRY
Sbjct: 126 LNCLFAMPTMAVDTHVFRVSKRIGLAKGNTTVIVEKELLQIIDEKWLTHAHHWLVLHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+CKARKP C+ C I C+
Sbjct: 186 ICKARKPSCRICHIKEYCEYY 206
>gi|254168035|ref|ZP_04874883.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289596043|ref|YP_003482739.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
gi|197623078|gb|EDY35645.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289533830|gb|ADD08177.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
Length = 211
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ ++ + P F +++A ++S ++ D + LF
Sbjct: 1 MVKDEDIGKVMEILRANVP--PHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLFGKYP 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + + + I G Y++K++ I ++ I+ ++D K+P LE L +LPG+GR
Sbjct: 59 LPRDLKNAPTDDIAHLIYPAGFYKQKAKKIKEIAKIIDEDYDGKVPDNLEELLKLPGVGR 118
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++LS + I VDTH+ RISNR+G KTP + E+ L++++ K+ + + L
Sbjct: 119 KTANIVLSRCYDKDVIAVDTHVHRISNRLGWVNTKTPEETERELMKVLLKKYWKDINELL 178
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V+ GR +C+ P+C C I CK K+
Sbjct: 179 VMFGRTICRPVAPKCDVCPIKKYCKYYKE 207
>gi|88608856|ref|YP_506140.1| endonuclease III [Neorickettsia sennetsu str. Miyayama]
gi|88601025|gb|ABD46493.1| endonuclease III [Neorickettsia sennetsu str. Miyayama]
Length = 216
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 137/209 (65%), Gaps = 5/209 (2%)
Query: 19 LYTPKE-----LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + EI F + P PK EL YVN FTLI+AVLLSAQSTDV+VNKATK L
Sbjct: 1 MMKKTRPSRSWVVEILERFQRQMPEPKIELEYVNKFTLIIAVLLSAQSTDVSVNKATKAL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A P+ + KL+ I+TIG++ K++NII+L+ LI++ IP + L L
Sbjct: 61 FRVAYEPEHYAKMDLAKLKESIKTIGLHNNKAKNIIALAKKLISDKQTDIPNNFQYLQSL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PGIGRK ANVIL FG I VDTH+FR+SNRIGL + +VE+ LL IP
Sbjct: 121 PGIGRKSANVILCTLFGEKRIAVDTHVFRVSNRIGLVHARNVLEVEKQLLENIPKTFLPQ 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
AH WLVLHGRY+CKARKP+C++CII++LC
Sbjct: 181 AHLWLVLHGRYICKARKPECKNCIINDLC 209
>gi|329576491|gb|EGG58001.1| endonuclease III [Enterococcus faecalis TX1467]
Length = 215
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF +
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAASP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A ++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVLEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|269958962|ref|YP_003328751.1| endonuclease 3 [Anaplasma centrale str. Israel]
gi|269848793|gb|ACZ49437.1| endonuclease 3 [Anaplasma centrale str. Israel]
Length = 210
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 110/202 (54%), Positives = 149/202 (73%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+++ +F FS P P+ EL Y N FTL+VA++LSA++TDV+VNK T LF++AD+PQK
Sbjct: 2 KDVDLLFGRFSEDNPHPRIELRYRNEFTLLVAIVLSARTTDVSVNKITDKLFDVADSPQK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+GE L++YI +IG+Y K++NII LS I++ ++ +PQ + LT LPG+GRK A+
Sbjct: 62 MLALGEDGLKSYINSIGLYNSKAKNIIKLSEIIVKDYGGVVPQDFDTLTDLPGVGRKSAS 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V L+ AFGIP I VDTH+FR+SNRIGL T VE SL +++P K + AH+WLVLHG
Sbjct: 122 VFLNSAFGIPAIAVDTHVFRVSNRIGLVKESTVLGVENSLNKVVPEKWKLYAHHWLVLHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RYVCKAR P C CII++LC
Sbjct: 182 RYVCKARAPLCHKCIINDLCDS 203
>gi|332526725|ref|ZP_08402827.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rubrivivax benzoatilyticus JA2]
gi|332111128|gb|EGJ11160.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Rubrivivax benzoatilyticus JA2]
Length = 214
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 143/200 (71%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E F + PSP+ EL + + F L+ AVLLSAQ+TDV VNKATK LF A TPQ++L
Sbjct: 6 IEPFFATLAAANPSPQTELEFTSVFELLCAVLLSAQATDVGVNKATKRLFARAPTPQRLL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G ++ IRTIG++R K++N+I IL+ + ++P++ E L LPG+GRK ANV+
Sbjct: 66 DLGLDQVTESIRTIGLFRTKAKNLIQTCRILVEQHGGEVPRSREALEALPGVGRKTANVV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++AFG PT+ VDTHIFR++NR GLAPGKTP VE LL +PPK+ +AH+WL+LHGRY
Sbjct: 126 LNVAFGEPTMAVDTHIFRVANRTGLAPGKTPLAVELKLLERVPPKYAVDAHHWLILHGRY 185
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC+AR+PQC+ C + C
Sbjct: 186 VCQARRPQCERCAVHRWCDS 205
>gi|46579403|ref|YP_010211.1| endonuclease III [Desulfovibrio vulgaris str. Hildenborough]
gi|46448817|gb|AAS95470.1| endonuclease III, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233225|gb|ADP86079.1| endonuclease III [Desulfovibrio vulgaris RCH1]
Length = 285
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++ L ++P+P L N + L+VA +L+AQ TD VNK T HLF
Sbjct: 1 MPLPSVQQRALQVLDLLRRRYPTPATHLVARNPWELLVATVLAAQCTDERVNKVTPHLFA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ P + ++ L+ I + G YR K++N++ + + ++P+T++ L +LPG
Sbjct: 61 LWPDPAALACATQEALEEVIHSTGFYRNKAKNLLGAARRVTEVHGGEVPRTMDELVQLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ RK ANV+L FG+ I VDTH+ RI +R+GL P VE+ L+R+ P + +
Sbjct: 121 VARKTANVVLWGGFGVNEGIAVDTHVKRIVHRMGLTKETDPVAVERDLMRLYPREAWGDV 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ LV GR+VC ARKP C+ C ++ +C ++
Sbjct: 181 NHMLVWFGRHVCDARKPLCEQCEMAGICAKV 211
>gi|33865876|ref|NP_897435.1| putative endonuclease [Synechococcus sp. WH 8102]
gi|33633046|emb|CAE07857.1| putative endonuclease [Synechococcus sp. WH 8102]
Length = 217
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 112/201 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + ++P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRKKERAQVVLERLNDQYPETPVPLDHSDSFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M + E+++ +IR +G+ + K++N+ L+ +L+ D ++PQ+ E L LPG+G
Sbjct: 61 EPAAMAQLEEQEILEHIRQLGLAKTKAKNVRRLAQLLLERHDGEVPQSFEALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL+ G + E+ L + P + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSNGDNVQRTERDLKDLFPREAWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR + C +
Sbjct: 181 IFYGREFCTARGCDGRICPMC 201
>gi|313886400|ref|ZP_07820122.1| endonuclease III [Porphyromonas asaccharolytica PR426713P-I]
gi|312924146|gb|EFR34933.1| endonuclease III [Porphyromonas asaccharolytica PR426713P-I]
Length = 219
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P+ EL Y + F+L+VAV+LSAQ TD VN T L
Sbjct: 1 MTLDERYRLALEGLAQLYPNADTELIYHDPFSLLVAVVLSAQCTDKRVNMVTPQLMAHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M L ++ ++ K++++I LS + + +P T E L LPG+GR
Sbjct: 61 TPEAMARASVDDLLAFMGSVSYPNNKAKHLIGLSERITQKHHGIVPSTREELEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A+V+L++ F P + VDTH++R++ RIGLA TP VEQ+L++ IP AH+
Sbjct: 121 KSASVMLAVCFETPAMPVDTHVYRVAKRIGLASSRATTPLAVEQALVKRIPQAQLIRAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+L GRY+CKARKP C C + C+
Sbjct: 181 QLILLGRYICKARKPLCAECTLHACCRHY 209
>gi|260587425|ref|ZP_05853338.1| endonuclease III [Blautia hansenii DSM 20583]
gi|260542292|gb|EEX22861.1| endonuclease III [Blautia hansenii DSM 20583]
Length = 217
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 23 KELEEIFYLFSLKW-PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +EI + K L + N L++A +LSAQ TD VN TK LF Q
Sbjct: 3 KRTKEILDKLDEVYTREYKCYLNHENPGQLLIATMLSAQCTDARVNIVTKDLFVKYPDMQ 62
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
K+L+ I+ G Y K++NII + + + ++P++LE L LPG+GRK A
Sbjct: 63 AFAKADLKELEQDIKPTGFYHNKAKNIIGCAQRICQVYGGEVPRSLEDLVSLPGVGRKTA 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NVI F P++ VDTH+ RIS R+G + P K+EQ L++++P +H + ++
Sbjct: 123 NVIRGNIFHEPSVVVDTHVKRISKRLGFTKEEDPEKIEQDLMKVLPKEHWILYNIQIITF 182
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
GR +C AR P+C+ C ++ CK
Sbjct: 183 GRQICFARSPKCEECFLTEYCKEY 206
>gi|227551375|ref|ZP_03981424.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257887515|ref|ZP_05667168.1| endonuclease III [Enterococcus faecium 1,141,733]
gi|257896010|ref|ZP_05675663.1| endonuclease III [Enterococcus faecium Com12]
gi|293378818|ref|ZP_06624975.1| endonuclease III [Enterococcus faecium PC4.1]
gi|227179494|gb|EEI60466.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257823569|gb|EEV50501.1| endonuclease III [Enterococcus faecium 1,141,733]
gi|257832575|gb|EEV58996.1| endonuclease III [Enterococcus faecium Com12]
gi|292642611|gb|EFF60764.1| endonuclease III [Enterococcus faecium PC4.1]
Length = 225
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKQKTMEALETMYEMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P T E L LPG+GR
Sbjct: 61 TPDALADASIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTTREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + + +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDASVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTARNPKCEVCPLLSICQDGK 209
>gi|163816208|ref|ZP_02207576.1| hypothetical protein COPEUT_02392 [Coprococcus eutactus ATCC 27759]
gi|158448628|gb|EDP25623.1| hypothetical protein COPEUT_02392 [Coprococcus eutactus ATCC 27759]
Length = 216
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 118/207 (57%), Gaps = 2/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +I ++P L + + L+V+V L+AQ TD VN + LF
Sbjct: 9 KKQRTLDIIERLKKEYPDTVCTLDTSHAWQLLVSVRLAAQCTDARVNVVVQDLFAKYPGV 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ A ++ ++ G+ + K+ +I + ++L++ ++ ++P +L+ L +LPG+GRK
Sbjct: 69 KELAAADVSDIEAIVKPCGLGKSKARDISACMNMLVDSYNCQVPDSLDELLKLPGVGRKS 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+I+ +G P I DTH R+ NR+GL G P KVE L ++IPP+ + + LV
Sbjct: 129 ANLIMGDIYGKPAIVTDTHCIRLVNRMGLVDGIKDPKKVEMELWKLIPPEESNDFCHRLV 188
Query: 200 LHGRYVCKAR-KPQCQSCIISNLCKRI 225
HGR VC AR KP C +C ++++CK+I
Sbjct: 189 DHGRAVCSARTKPHCDACCLNDICKKI 215
>gi|298675712|ref|YP_003727462.1| endonuclease III [Methanohalobium evestigatum Z-7303]
gi|298288700|gb|ADI74666.1| endonuclease III [Methanohalobium evestigatum Z-7303]
Length = 212
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E I+ L ++P+P+ L + N F L++A +LSAQ+TD VN+ T+HLF+ +
Sbjct: 9 FENIWSLLQKEYPNPEPALRFNNPFQLLIATILSAQATDTQVNRVTEHLFKKYPYVDDLA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
K+L+ I + G Y+ K++NI + ++ ++F++K+P + + L G+GRK AN++
Sbjct: 69 NADIKELEKDIYSTGFYKNKAKNIKKCAQMIKSQFNSKVPDNMNDMMELSGVGRKTANIV 128
Query: 145 LSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
LS FG I VDTH+ R+S R+GL KTP K+EQ L+++ + L+LHGR
Sbjct: 129 LSRGFGVHEGIAVDTHVKRLSQRLGLTQNKTPEKIEQDLMKLADKRDWDTLSLILILHGR 188
Query: 204 YVCKARKPQCQSCIISNLCKR 224
+C A+ P+C++C+++ LC
Sbjct: 189 KICHAKNPECENCVVNTLCPS 209
>gi|227502465|ref|ZP_03932514.1| endonuclease III [Corynebacterium accolens ATCC 49725]
gi|227076834|gb|EEI14797.1| endonuclease III [Corynebacterium accolens ATCC 49725]
Length = 196
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 112/193 (58%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ + P + EL + + L+VA +LSAQ TD VN T LF T A + L
Sbjct: 1 MAHEHPDARCELDFDSPLQLLVATVLSAQCTDARVNSVTPELFRTYPTAADYAAARREDL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +R +G R K+ +++ + L++EFD ++PQT++ LT LPG+GRK A V+L AFGI
Sbjct: 61 EAILRPLGFQRAKAGHLMGIGERLVSEFDGEVPQTVKELTSLPGVGRKTALVVLGDAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P + VDTH R+ R+ L KTP K+E+ + ++I + ++ HGR VC AR P
Sbjct: 121 PGLTVDTHFSRLMQRLELTGEKTPVKIERDIAKLIAEAEWTMFSHRVIFHGRRVCHARNP 180
Query: 212 QCQSCIISNLCKR 224
+C +C++ +LC
Sbjct: 181 ECGNCVVRDLCPA 193
>gi|220903480|ref|YP_002478792.1| endonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219867779|gb|ACL48114.1| endonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 228
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
P +++ ++P+P L + L+VA +L+AQ TD VN T LF P
Sbjct: 7 RPARAQKVLAALRTRYPAPHTHLDAETAWQLLVATVLAAQCTDARVNTVTPELFRRWPGP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++ + ++L+ IR+ G YR K++N++ + + +D +IP +LE L LPG+ RK
Sbjct: 67 ADLMGVPVEELEAVIRSTGFYRSKAKNLLGAAARVCEVYDGRIPNSLEELITLPGVARKT 126
Query: 141 ANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L AFGI VDTH+ RIS R+GL P +E+ L+ + P + + ++ +V
Sbjct: 127 ANVVLFGAFGINEGLAVDTHVKRISYRLGLTESTDPVVIERDLMALFPREEWGDVNHRMV 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
GR VC+ARKP C C ++ C R++
Sbjct: 187 WFGREVCEARKPLCGQCEMAIFCPRLE 213
>gi|261406127|ref|YP_003242368.1| endonuclease III [Paenibacillus sp. Y412MC10]
gi|329929806|ref|ZP_08283482.1| endonuclease III [Paenibacillus sp. HGF5]
gi|261282590|gb|ACX64561.1| endonuclease III [Paenibacillus sp. Y412MC10]
gi|328935784|gb|EGG32245.1| endonuclease III [Paenibacillus sp. HGF5]
Length = 223
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I +P EL + N F L +AVLLSAQ TD VNK TK LF+ T
Sbjct: 1 MNAATVRHILDTMESMFPDAHCELNHSNAFELTIAVLLSAQCTDETVNKVTKDLFQKYKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +++ ++L+ IR IG+YR K+++I +L ILI ++ ++P+ + L +LPG+GRK
Sbjct: 61 PLDYVSVPIEELEQDIRRIGLYRNKAKHIQNLCRILIEQYGGEVPEAHDELVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AFG+P I VDTH+ R+S R+GLA + +VE+ L++ +P + H+ +
Sbjct: 121 TANVVVSNAFGVPAIAVDTHVERVSKRLGLAAWKDSVLEVEKKLMKRVPREEWTMTHHRI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ PQC C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQNPQCPVCPLLDVCREGKK 209
>gi|327440742|dbj|BAK17107.1| predicted EndoIII-related endonuclease [Solibacillus silvestris
StLB046]
Length = 219
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + +P EL + N F L +A LLSAQ TDV VNK TK LF+
Sbjct: 1 MITKAKWNHFLDEMDRMYPDAHCELVHDNPFELTIATLLSAQCTDVLVNKVTKQLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ L + ++LQN IR+IG+YR K++NI L LINE+ ++P + E L LPG+GR
Sbjct: 61 TPQDYLNVSLEELQNDIRSIGLYRNKAKNIQLLCARLINEYGGEVPASREELVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF IP + VDTH+ R+S R+GL + +VE+++++ P + AH+
Sbjct: 121 KTANVVLSVAFDIPAMAVDTHVERVSKRLGLCRWKDSVLEVEETIMKKTPIERWSRAHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ P C +C + + C+ ++
Sbjct: 181 IIFFGRYHCKAQNPGCGTCPLLDDCREGQK 210
>gi|258543592|ref|YP_003189025.1| endonuclease III [Acetobacter pasteurianus IFO 3283-01]
gi|256634670|dbj|BAI00646.1| endonuclease III [Acetobacter pasteurianus IFO 3283-01]
gi|256637726|dbj|BAI03695.1| endonuclease III [Acetobacter pasteurianus IFO 3283-03]
gi|256640780|dbj|BAI06742.1| endonuclease III [Acetobacter pasteurianus IFO 3283-07]
gi|256643835|dbj|BAI09790.1| endonuclease III [Acetobacter pasteurianus IFO 3283-22]
gi|256646890|dbj|BAI12838.1| endonuclease III [Acetobacter pasteurianus IFO 3283-26]
gi|256649943|dbj|BAI15884.1| endonuclease III [Acetobacter pasteurianus IFO 3283-32]
gi|256652933|dbj|BAI18867.1| endonuclease III [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655987|dbj|BAI21914.1| endonuclease III [Acetobacter pasteurianus IFO 3283-12]
Length = 285
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 142/223 (63%), Gaps = 3/223 (1%)
Query: 3 SSKKSDSYQGNSPLGCL---YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+ K + + + P TP+E+ S WP + EL Y FTL+VAV+LSA
Sbjct: 44 AKKTAPATPSSGPAAIAPRDMTPQEIYSFLTDLSQAWPDAQTELLYTTPFTLLVAVVLSA 103
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+TD +VN+ T LFE A TP M+ +GE+++ IRTIG++R K++N++ LS L+ +
Sbjct: 104 QATDASVNRVTPALFEAAPTPAAMVELGEEEVGKLIRTIGLWRNKAKNVVELSRQLVEDH 163
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P T E L +L G+GRK ANV+L++AF PT+ VDTH+FR++NR GL GKT VE
Sbjct: 164 HGEVPGTREELEKLAGVGRKTANVVLNVAFHKPTVPVDTHVFRLANRSGLGRGKTVEAVE 223
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++L IP + +H+W++L GRYVCKARKP+C C N C
Sbjct: 224 KALEARIPLEMIQPSHHWMILQGRYVCKARKPECWRCNAKNPC 266
>gi|19551543|ref|NP_599545.1| EndoIII-related endonuclease [Corynebacterium glutamicum ATCC
13032]
gi|62389190|ref|YP_224592.1| endonuclease III protein [Corynebacterium glutamicum ATCC 13032]
gi|21323057|dbj|BAB97686.1| Predicted EndoIII-related endonuclease [Corynebacterium glutamicum
ATCC 13032]
gi|41324523|emb|CAF18863.1| PROBABLE ENDONUCLEASE III PROTEIN [Corynebacterium glutamicum ATCC
13032]
Length = 260
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 107/194 (55%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ +P EL + N L VA +LSAQ TDV VN+ T LF+ T +L
Sbjct: 38 LTVAYPDAHCELDFTNPLELTVATILSAQCTDVRVNQVTPALFKRYPTATDYANADRTEL 97
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +IR G YR K+ ++I L LI+ D ++P TLE L LPG+GRK ANV+L AFG+
Sbjct: 98 EEFIRPTGFYRNKATSLIGLGEALISLHDGQVPGTLEQLVELPGVGRKTANVVLGNAFGV 157
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R+ L + P KVE+ + +I + L+ HGR +C +R+
Sbjct: 158 PGITVDTHFGRLVRRLKLTDEEDPVKVEKVMNELIEKPEWTMFSHRLIFHGRRICHSRRA 217
Query: 212 QCQSCIISNLCKRI 225
C +C+++ C
Sbjct: 218 ACGACMLAADCPSF 231
>gi|25026845|ref|NP_736899.1| putative endonuclease III [Corynebacterium efficiens YS-314]
gi|259506093|ref|ZP_05748995.1| endonuclease III [Corynebacterium efficiens YS-314]
gi|23492125|dbj|BAC17099.1| putative endonuclease III [Corynebacterium efficiens YS-314]
gi|259166309|gb|EEW50863.1| endonuclease III [Corynebacterium efficiens YS-314]
Length = 264
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 106/194 (54%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ +P EL + N L VA +LSAQ TDV VN+ T LF T +L
Sbjct: 42 LAVAYPDAHCELDFTNPLELTVATILSAQCTDVRVNQVTPALFRRYPTAWDYANADRAEL 101
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G YR K+ ++I L L++ D ++P TLE L +LPGIGRK ANV+L AFG+
Sbjct: 102 EELIRPTGFYRNKATSLIGLGRALVSLHDGEVPHTLEELVKLPGIGRKTANVVLGDAFGV 161
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R++ R+ L P +VE + +I K + L+ HGR +C +R+
Sbjct: 162 PGITVDTHFGRLARRLKLTEETDPVRVEHEIGALIEKKEWTLFSHRLIFHGRRICHSRRA 221
Query: 212 QCQSCIISNLCKRI 225
C +C+++ C
Sbjct: 222 ACGACMLAADCPSF 235
>gi|297584383|ref|YP_003700163.1| endonuclease III [Bacillus selenitireducens MLS10]
gi|297142840|gb|ADH99597.1| endonuclease III [Bacillus selenitireducens MLS10]
Length = 217
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E+E + ++ +P EL + N L +AV+LSAQ+TD VNK T LF
Sbjct: 1 MLKKSEIERVRQTWADMFPDAHCELTHQNPLELTIAVVLSAQATDSLVNKVTPRLFAKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + ++L+ IR+IG+YR K++NI L+ +I+++ +IP++ L +L G+GR
Sbjct: 61 TPEDYANVPLEELEQDIRSIGLYRSKAKNIKKLAQSVIDDYQGEIPKSKTELKKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AF P I VDTH+ R+S R+G+ + +VE++L++ IP + H+
Sbjct: 121 KTANVVASVAFDEPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKIPREEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ P C +C +S++C+ K+
Sbjct: 181 MIFFGRYHCKAQNPNCTACPLSDMCREGKK 210
>gi|149918760|ref|ZP_01907247.1| putative endonuclease [Plesiocystis pacifica SIR-1]
gi|149820361|gb|EDM79777.1| putative endonuclease [Plesiocystis pacifica SIR-1]
Length = 279
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 111/203 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++I +P L + + FTL+VAVLLSAQ+TD VN+ T LF
Sbjct: 1 MRRADKAQKILAQLDELYPELPIPLDHRDAFTLLVAVLLSAQTTDARVNEVTPALFADGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M A+ K++ +I+T+G+ K++ + +L+ L++E D ++PQ + L RLPG+G
Sbjct: 61 DPATMAALPVKQILGHIKTLGLAPTKAKRVKALAQQLVDEHDGEVPQDMAALERLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G T + E L R+ P + H
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAARWGLSNGTTVERTEADLKRLFPEDRWNDVHLQF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNL 221
+ GR C A + C I
Sbjct: 181 IFFGREYCPALYHELADCPICGW 203
>gi|72382050|ref|YP_291405.1| putative endonuclease [Prochlorococcus marinus str. NATL2A]
gi|72001900|gb|AAZ57702.1| endonuclease III/Nth [Prochlorococcus marinus str. NATL2A]
Length = 217
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 119/202 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ I +P L + N FTL+VAV+LSAQSTD VN+ TK LF++A
Sbjct: 1 MKKDERIKIIIKRLEEIYPETPIPLDHQNGFTLLVAVVLSAQSTDKKVNELTKELFKVAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +KM +GE K+ NYI+ +G+ + K++N +LS I+ +F+N +P T + L LPG+G
Sbjct: 61 SAEKMYKLGENKIYNYIKQLGLAKTKAKNTHNLSKIIYEKFNNIVPNTFQELESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG+P+ VDTHI R+S R GL GK + E+ L R+ P K H +
Sbjct: 121 KTASVVMSQVFGVPSFPVDTHIHRLSQRWGLTSGKNVIQTEKDLKRLFPKKLWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGREYCSARGCNGTICNLCK 202
>gi|119483275|ref|ZP_01618689.1| endonuclease III [Lyngbya sp. PCC 8106]
gi|119458042|gb|EAW39164.1| endonuclease III [Lyngbya sp. PCC 8106]
Length = 224
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
L + EI L +P + L Y L+VA +LSAQ TD VNK T LF+
Sbjct: 5 KRLSIKQRALEILVRLKLLYPDARCTLTYQTPVQLLVATILSAQCTDERVNKVTPALFKR 64
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ +++LQ +R+ G YR K++NI + ++ +F K+P+ +E L LPG+
Sbjct: 65 FPDAFSLAKADDEQLQELVRSTGFYRNKAKNIKAACRMIEEKFGGKVPKMMEQLLELPGV 124
Query: 137 GRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
RK ANV+L+ A+GI + VDTH+ R+S R+GL P ++E+ L+ ++P N
Sbjct: 125 ARKTANVVLANAYGINMGVTVDTHVKRLSQRLGLTKHTDPVRIERDLMLLVPQPDWENWS 184
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR VC AR P C C +S+LC
Sbjct: 185 IRLIYHGRAVCSARNPACYDCKLSDLCPS 213
>gi|282899607|ref|ZP_06307571.1| Endonuclease III/Nth [Cylindrospermopsis raciborskii CS-505]
gi|281195486|gb|EFA70419.1| Endonuclease III/Nth [Cylindrospermopsis raciborskii CS-505]
Length = 217
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
GN + L EI +P L Y L+VA +LSAQ TD VNK T
Sbjct: 2 GNKKISKLSKRGLALEILSRLYRLYPDATCSLNYQTPVQLLVATILSAQCTDERVNKVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF Q + +L+ + + G YR K++NI S +++++F++ +P +E L
Sbjct: 62 DLFGRFPDVQSLAEADVLELEKLVHSTGFYRNKAKNIKSACMMIVSDFNSIVPNKMEELL 121
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+ RK ANV+L+ A+GI + VDTH+ R++ R+GL P +E+ L+ ++P
Sbjct: 122 KLPGVARKTANVVLAHAYGINAGVTVDTHVKRLTQRLGLTASTEPISIEKDLMELLPQPE 181
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
N L+ HGR VCKAR P C++C + ++C
Sbjct: 182 WENWSIRLIYHGRAVCKARSPSCENCDLVDVC 213
>gi|293570521|ref|ZP_06681576.1| endonuclease III [Enterococcus faecium E980]
gi|291609467|gb|EFF38734.1| endonuclease III [Enterococcus faecium E980]
Length = 225
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKQKTMEALETMYEMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI S + LI FD ++P T E L LPG+GR
Sbjct: 61 TPDALADASIDEIILKIKTIGLYRNKAKNIKSCAQQLIERFDGQVPTTREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + + +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDASVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTARNPKCEVCPLLSICQDGK 209
>gi|331083706|ref|ZP_08332817.1| endonuclease III [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403917|gb|EGG83469.1| endonuclease III [Lachnospiraceae bacterium 6_1_63FAA]
Length = 217
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 1/204 (0%)
Query: 23 KELEEIFYLFSLKW-PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K +EI + K L + N L++A +LSAQ TDV VN TK LF Q
Sbjct: 3 KRTKEILDKLDEVYTREYKCYLNHENPGQLLIATMLSAQCTDVRVNIVTKDLFVKYPDMQ 62
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
K+L+ I+ G Y K++NII + + + ++P++LE L LPG+GRK A
Sbjct: 63 AFAKADLKELEQDIKPTGFYHNKAKNIIGCAQRICQVYSGEVPRSLEDLVSLPGVGRKTA 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NVI F P++ VDTH+ RIS R+G + P K+EQ L++++P +H + ++
Sbjct: 123 NVIRGNIFHEPSVVVDTHVKRISKRLGFTKEEDPEKIEQDLMKVLPKEHWILYNIQIITF 182
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
GR +C AR P+C+ C ++ CK
Sbjct: 183 GRQICFARSPKCEECFLTEYCKEY 206
>gi|167747754|ref|ZP_02419881.1| hypothetical protein ANACAC_02475 [Anaerostipes caccae DSM 14662]
gi|167653116|gb|EDR97245.1| hypothetical protein ANACAC_02475 [Anaerostipes caccae DSM 14662]
Length = 231
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K EI ++P L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 21 MTKDKLALEIIERLKKEYPDVGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVQDLYEKYP 80
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ +R G+ R K+ +I + IL +E+ IP + L +LPG+GR
Sbjct: 81 DVNALAEADPADIEAIVRPCGLGRSKARDISACMKILRDEYGGGIPDNFKALMKLPGVGR 140
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+++ FG P I DTH R+ NR+GL P KVE +L IIPP+ + +
Sbjct: 141 KSANLVMGDVFGEPAIVTDTHCIRLVNRMGLVDQIKDPKKVEMALWEIIPPEEGSDFCHR 200
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV GR +C AR KP C+ C + ++C +
Sbjct: 201 LVFLGRDICTARTKPHCEVCCLKDICPK 228
>gi|296120881|ref|YP_003628659.1| endonuclease III [Planctomyces limnophilus DSM 3776]
gi|296013221|gb|ADG66460.1| endonuclease III [Planctomyces limnophilus DSM 3776]
Length = 286
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
I +P + L + + + L+ A +LSAQ TD VN T LF+ TP
Sbjct: 13 DRTGRILAQLERTYPDVECALEHTSPYELLAATILSAQCTDERVNMVTPGLFKAYPTPVH 72
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ ++ +++ G +R K+ N+I ++ ++ + +IPQ LE L LPG+GRK AN
Sbjct: 73 LAKARQEDVEALVKSTGFFRNKAANLIGMAQAVVEKHQGEIPQALEELVALPGVGRKTAN 132
Query: 143 VILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+L G+P+ + VDTH+ RIS +GLA G +E+ L+ I+P + L+ H
Sbjct: 133 VLLGTFHGVPSGVVVDTHVQRISRLLGLAKGNNAETIERELMAIVPQHEWIMLSHRLIHH 192
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
GR +C AR+PQC C + C+R+
Sbjct: 193 GRQICIARRPQCTRCPLLADCRRV 216
>gi|299821672|ref|ZP_07053560.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
gi|299817337|gb|EFI84573.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
Length = 219
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T ++ +P EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLTKQQTIMCIEEMERMFPMAHCELEHRNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ L + ++L + IR+IG+Y+ K++NI LS L+ FD ++P T L LPG+GR
Sbjct: 61 RPEDYLDVSVEELMDDIRSIGLYKNKAKNIQGLSRKLLKTFDGQVPATHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP + VDTH+ R+S R+ + + +VEQ+L+R +P + +AH+
Sbjct: 121 KTANVVLSVGFGIPALAVDTHVERVSKRLAICRWKDSVTEVEQTLMRKLPKEMWSDAHHA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKARKP+CQ C + ++C+ K+
Sbjct: 181 MIFFGRYHCKARKPECQVCPLLSICREGKK 210
>gi|168701184|ref|ZP_02733461.1| endonuclease III [Gemmata obscuriglobus UQM 2246]
Length = 250
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ + I + +P +G L Y N F L+VAV+LSAQ TD VN T
Sbjct: 4 PDPTAPKLAPARDRVGPINERLAPLYPEFEG-LNYANPFQLLVAVVLSAQCTDKRVNTIT 62
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
LF T M ++L+ ++ G Y+ K++NI + ++ F ++P L+ L
Sbjct: 63 PALFARFPTAADMATCDIRELEQLVKPSGFYKNKAKNIRAACVEMVARFGGQVPTDLDDL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANVI AF P + VDTH+ R+S R+GL ++P KVE +L I+P
Sbjct: 123 VSLPGVGRKTANVIRGHAFETPGVTVDTHVGRLSRRLGLTRHQSPVKVELALAEIVPQAE 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L++HGR VC ARKP+C+ C +++LC ++
Sbjct: 183 WLHFSGRLIMHGRKVCLARKPRCEQCAVADLCPKV 217
>gi|331092189|ref|ZP_08341019.1| hypothetical protein HMPREF9477_01662 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401961|gb|EGG81535.1| hypothetical protein HMPREF9477_01662 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 210
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V V L+AQ TD VN + L+
Sbjct: 1 MRKKELALEVIERLKKEYPVADCTLDYDEAWKLLVGVRLAAQCTDERVNIVVEKLYAKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++++ +R G+ + K+ +I + IL +++++IP T + + LPG+GR
Sbjct: 61 DVESLANAPVEEIEEIVRPCGLGKSKARDISACMKILHEKYNDQIPTTFDEILALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE L +IIP + + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVNGIKEPKKVEMELWKIIPGEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C C ++++C
Sbjct: 181 LVYHGREVCTARTKPYCDRCCLADIC 206
>gi|254482872|ref|ZP_05096109.1| endonuclease III [marine gamma proteobacterium HTCC2148]
gi|214036953|gb|EEB77623.1| endonuclease III [marine gamma proteobacterium HTCC2148]
Length = 217
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 115/204 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E I +P L + + +TL++AVLLSAQ TD VN+ T LF +AD
Sbjct: 1 MLKAERVEYILQRLQALYPETPVPLDHTDPYTLLIAVLLSAQCTDERVNQVTPALFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M ++ ++++ IR G+ +KS+ I LS IL++E D +P +E L RLPG+G
Sbjct: 61 NPHDMASLDVEQIRLIIRPCGLSPQKSKAIKRLSEILLDEHDAVVPADMEALERLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL GK + E+ L R+ +H H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLTSGKNVVQTERDLKRLFAEEHWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR + C I C
Sbjct: 181 IFYGREFCSARGCDGRVCEICTTC 204
>gi|227485039|ref|ZP_03915355.1| DNA-(apurinic or apyrimidinic site) lyase [Anaerococcus
lactolyticus ATCC 51172]
gi|227237036|gb|EEI87051.1| DNA-(apurinic or apyrimidinic site) lyase [Anaerococcus
lactolyticus ATCC 51172]
Length = 201
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+P L + F L+VA +LSAQ+TD++VNK TK +F++A+TP+ + K+
Sbjct: 2 LDKMYPDVDHSMLNFTTPFELLVATILSAQATDISVNKVTKEMFKVANTPEDFANMDIKE 61
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L+N+IRTIGIYR K++NI + S ILI ++++ +P + L +LPG+GRK ANV+ + AFG
Sbjct: 62 LENHIRTIGIYRNKAKNIKAASKILIEDYNSIVPADKKELQKLPGVGRKTANVVCANAFG 121
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
IP+I VDTH+FR++NRIGLA +K + L + + H+ L+ HGR +CKAR
Sbjct: 122 IPSIAVDTHVFRVANRIGLADANNVDKTQDQLEKRLDKSRWSKTHHQLITHGRVLCKARN 181
Query: 211 PQCQSCIISNLCKRIKQ 227
P C+ C+I+ LC ++
Sbjct: 182 PLCEECLINKLCIYYRR 198
>gi|182413747|ref|YP_001818813.1| endonuclease III [Opitutus terrae PB90-1]
gi|177840961|gb|ACB75213.1| endonuclease III [Opitutus terrae PB90-1]
Length = 216
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 115/201 (57%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P PK L + + FTL++AVLLSA +TD +VNKAT LF +AD
Sbjct: 1 MTRQERAAYVDRRLAELYPDPKIPLDHQDAFTLLIAVLLSAHTTDRSVNKATPELFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+KM + K+++ IR +G++ KS+ I L+ +L+ + ++P+T E L LPG+G
Sbjct: 61 TPEKMARVPVKEIERIIRPVGLFAAKSKAIAGLARMLMEKHGGQVPRTFEELEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R L GK+ + E+ L + P H
Sbjct: 121 KTASVVMTQAFGVPAFPVDTHIHRLAQRWKLTSGKSVEQTERDLKALFPEARWNKLHLQF 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C I
Sbjct: 181 IYYGREHCTARGCDGTICEIC 201
>gi|148985179|ref|ZP_01818418.1| endonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|147922624|gb|EDK73742.1| endonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|301800192|emb|CBW32800.1| putative endonuclease III [Streptococcus pneumoniae OXC141]
Length = 209
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF +
Sbjct: 2 ILSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVVFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|189218449|ref|YP_001939090.1| endoIII-related endonuclease [Methylacidiphilum infernorum V4]
gi|189185307|gb|ACD82492.1| Predicted EndoIII-related endonuclease [Methylacidiphilum
infernorum V4]
Length = 232
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 4/228 (1%)
Query: 2 VSSKKSDSYQGNSPL---GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLS 58
+ K+ + + +SP L + + +I + +P+ K L++ N L++A +LS
Sbjct: 1 MKKKQKTAIEASSPAHGPASLDEKERIAKILAILEKTYPNSKPALFFRNPLELLIATILS 60
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
A+ TD VN T LFE T + + ++L+ I ++G Y+ K+ NI + ++ +
Sbjct: 61 ARCTDEQVNLVTAKLFEKYKTAEDYASASIEELERMIHSLGFYKTKARNIKNTCRLIATK 120
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNK 177
F+ ++P ++ L LPG+GRK ANV+L A+GI I VDTH+ R++ R+GL K P K
Sbjct: 121 FNGQVPPQMDKLVELPGVGRKTANVVLGNAYGINEGIVVDTHVSRVAYRLGLTKEKQPEK 180
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+E L+R IP + L+ HGR CKAR P C C ++ LC +I
Sbjct: 181 IELDLMRCIPQESWTTFSNLLIWHGRKRCKARNPDCLHCELNLLCPKI 228
>gi|325663082|ref|ZP_08151532.1| hypothetical protein HMPREF0490_02272 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470536|gb|EGC73766.1| hypothetical protein HMPREF0490_02272 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 213
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ K E+ ++P + L Y + L++ V L+AQ TD VN + L+E
Sbjct: 1 MAKTKKQKLALEVIERLREEYPDAECTLDYDQAWKLLIGVRLAAQCTDERVNIVVEKLYE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ +++ +R G+ + K+ +I + IL ++ +IP+T + L +LPG
Sbjct: 61 KFPDVDALADADVAEIEEIVRPCGLGKSKARDISACMKILKEQYGGQIPKTFDELLKLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNA 194
+GRK AN+I+ FG P I DTH R+ NRIGL G P KVE L +IIPP+ +
Sbjct: 121 VGRKSANLIMGDVFGEPAIVTDTHCIRLVNRIGLVDGIKEPKKVEMELWKIIPPEEGSDF 180
Query: 195 HYWLVLHGRYVCKAR-KPQCQSCIISNLC 222
+ LV HGR VC AR KP C C ++++C
Sbjct: 181 CHRLVYHGREVCTARTKPHCDRCCLADIC 209
>gi|323344306|ref|ZP_08084532.1| endonuclease III [Prevotella oralis ATCC 33269]
gi|323095035|gb|EFZ37610.1| endonuclease III [Prevotella oralis ATCC 33269]
Length = 216
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F K P+ EL++ + F L+V+ LLSAQ TD +N+ T LF
Sbjct: 1 MNRKERYVYILNYFRKKMPNVSTELHFGSAFQLLVSTLLSAQCTDKRINQITPALFRRYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ+M + + YI+T+ KS++++ ++ +++++F +P+T+E LT+LPG+GR
Sbjct: 61 TPQEMAKAEVEDVLEYIKTVSYPNAKSKHLVEMARMIVDDFGGIVPETMEELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG T+ VDTH++R+S+R+GL P TP KVE+ LLR IP + +AH+
Sbjct: 121 KTANVLQAVWFGKATMAVDTHVYRVSHRLGLVPKTANTPYKVERELLRNIPKEDVPDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC +R P+C C + C ++
Sbjct: 181 WLLLHGRYVCLSRIPKCPECPFGSFCPKL 209
>gi|145294424|ref|YP_001137245.1| hypothetical protein cgR_0379 [Corynebacterium glutamicum R]
gi|140844344|dbj|BAF53343.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 260
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 107/194 (55%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ +P EL + N L VA +LSAQ TDV VN+ T LF+ T +L
Sbjct: 38 LTVAYPDAHCELDFTNPLELTVATILSAQCTDVRVNQVTPALFKRYPTAADYANADRTEL 97
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +IR G YR K+ ++I L LI+ D ++P TLE L LPG+GRK ANV+L AFG+
Sbjct: 98 EEFIRPTGFYRNKATSLIGLGEALISLHDGQVPGTLEQLVELPGVGRKTANVVLGNAFGV 157
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+ R+ L + P KVE+ + +I + L+ HGR +C +R+
Sbjct: 158 PGITVDTHFGRLVRRLKLTDEEDPVKVEKVMNELIEKPEWTMFSHRLIFHGRRICHSRRA 217
Query: 212 QCQSCIISNLCKRI 225
C +C+++ C
Sbjct: 218 ACGACMLAADCPSF 231
>gi|56416622|ref|YP_153696.1| endonuclease III [Anaplasma marginale str. St. Maries]
gi|222474988|ref|YP_002563403.1| endonuclease III (nth) [Anaplasma marginale str. Florida]
gi|255002967|ref|ZP_05277931.1| endonuclease III (nth) [Anaplasma marginale str. Puerto Rico]
gi|255004095|ref|ZP_05278896.1| endonuclease III (nth) [Anaplasma marginale str. Virginia]
gi|56387854|gb|AAV86441.1| endonuclease III [Anaplasma marginale str. St. Maries]
gi|222419124|gb|ACM49147.1| endonuclease III (nth) [Anaplasma marginale str. Florida]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 110/202 (54%), Positives = 148/202 (73%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+++ +F FS P P+ EL Y N FTL+VA++LSA++TDV+VNK T LF++AD+PQK
Sbjct: 2 KDVDLLFGRFSEDNPHPRIELRYRNEFTLLVAIVLSARTTDVSVNKITDKLFDVADSPQK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+GE L+ YI +IG+Y K++NII LS I++ ++ +PQ + LT LPG+GRK A+
Sbjct: 62 MLALGEDGLKGYIDSIGLYNSKAKNIIKLSEIIVKDYGGVVPQDFDALTDLPGVGRKSAS 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V L+ AFGIP I VDTH+FR+SNRIGL T VE SL +++P K + AH+WLVLHG
Sbjct: 122 VFLNSAFGIPAIAVDTHVFRVSNRIGLVKESTVLGVENSLNKVVPEKWKLYAHHWLVLHG 181
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
RYVCKAR P C CII++LC
Sbjct: 182 RYVCKARAPLCHKCIINDLCDS 203
>gi|6939619|dbj|BAA90651.1| End3 [Paenibacillus polymyxa]
Length = 224
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
I +P EL + N F L +AVLLSAQ +D VNK T LF+ +
Sbjct: 1 MNAATARHILDTIGTMFPDAHCELNHDNAFELTIAVLLSAQCSDQMVNKVTADLFQKYKS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ LA+ ++L+ IR IG+YR K+++I +L ILI+++ +IP + L +LPG+GRK
Sbjct: 61 PEDYLAVPLEELEQDIRRIGLYRNKAKHIHNLCRILIDQYGGEIPSEHDQLVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AF +P I VDTH+ R+S R+G A + +VE+ L++ +P H+ L
Sbjct: 121 TANVVVSTAFDVPAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEWSVTHHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ PQCQ C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQNPQCQVCPLLDVCREGKK 209
>gi|281417954|ref|ZP_06248974.1| endonuclease III [Clostridium thermocellum JW20]
gi|281409356|gb|EFB39614.1| endonuclease III [Clostridium thermocellum JW20]
Length = 213
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 109/196 (55%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
F + + L Y N L+++ L+AQ TD VN TK LF+ + K+L
Sbjct: 15 FDELYRDAQCTLDYENPLQLLISTQLAAQCTDARVNVVTKTLFKKYKDARDFANADLKEL 74
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ I+ G Y K++NI I++ +F K+P +E L LPG+GRK ANVIL AFGI
Sbjct: 75 EQDIKPTGFYHNKAKNIKETCKIIVEKFGGKVPDNMEDLLTLPGVGRKTANVILGDAFGI 134
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+SNRIGL P K+E L+ I+P + + LV HGR VCKARKP
Sbjct: 135 PGIVVDTHAKRLSNRIGLVNTGDPKKIEFELMEIVPKEKWSLFCHQLVYHGRAVCKARKP 194
Query: 212 QCQSCIISNLCKRIKQ 227
+C C I + C K+
Sbjct: 195 ECDKCAIIDYCDYGKE 210
>gi|323485385|ref|ZP_08090733.1| hypothetical protein HMPREF9474_02484 [Clostridium symbiosum
WAL-14163]
gi|323694147|ref|ZP_08108326.1| endonuclease III [Clostridium symbiosum WAL-14673]
gi|323401248|gb|EGA93598.1| hypothetical protein HMPREF9474_02484 [Clostridium symbiosum
WAL-14163]
gi|323501864|gb|EGB17747.1| endonuclease III [Clostridium symbiosum WAL-14673]
Length = 218
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 1/206 (0%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + I L ++ + L + + L++AV++SAQ TD VN T LF+ DT +
Sbjct: 11 ERVNRILALLDEEYGTDYRCYLNHETPWQLLIAVIMSAQCTDARVNIVTADLFKKYDTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
K K+L+ I + G Y K++NII+ L+ F ++P+TLE LT L G+GRK A
Sbjct: 71 KFANADLKELEKDIHSTGFYHMKAKNIIACCKSLVENFGGEVPRTLEELTSLAGVGRKTA 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NVI + P+I VDTH+ RIS ++GL + P K+E L++++P +H + ++
Sbjct: 131 NVIRGNIYNEPSIVVDTHVKRISRKLGLTKEEDPEKIEYDLMKVLPKEHWILWNIQIITL 190
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GR +C AR P+C C + C ++
Sbjct: 191 GRSICIARSPKCGECFLRENCPGAEK 216
>gi|125973798|ref|YP_001037708.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Clostridium thermocellum ATCC 27405]
gi|256004530|ref|ZP_05429509.1| endonuclease III [Clostridium thermocellum DSM 2360]
gi|125714023|gb|ABN52515.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Clostridium thermocellum ATCC 27405]
gi|255991535|gb|EEU01638.1| endonuclease III [Clostridium thermocellum DSM 2360]
gi|316940009|gb|ADU74043.1| endonuclease III [Clostridium thermocellum DSM 1313]
Length = 213
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 109/196 (55%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
F + + L Y N L+++ L+AQ TD VN TK LF+ + K+L
Sbjct: 15 FDELYRDAQCTLDYENPLQLLISTQLAAQCTDARVNVVTKTLFKKYKDARDFANADLKEL 74
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ I+ G Y K++NI I++ +F K+P +E L LPG+GRK ANVIL AFGI
Sbjct: 75 EQDIKPTGFYHNKAKNIKETCKIIVEKFGGKVPDNMEDLLTLPGVGRKTANVILGDAFGI 134
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH R+SNRIGL P K+E L+ I+P + + LV HGR VCKARKP
Sbjct: 135 PGIVVDTHAKRLSNRIGLVNTDDPKKIEFELMEIVPKEKWSLFCHQLVYHGRAVCKARKP 194
Query: 212 QCQSCIISNLCKRIKQ 227
+C C I + C K+
Sbjct: 195 ECDKCAIIDYCDYGKE 210
>gi|295107866|emb|CBL21819.1| Predicted EndoIII-related endonuclease [Ruminococcus obeum A2-162]
Length = 210
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K E+ ++P L Y + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTKEKLALEVIDRLKKEYPDVGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEDLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A + ++ +R G+ + K+ +I + IL ++ + +P T E L +LPG+GR
Sbjct: 61 DVASLAAAEPEDIETIVRPCGLGKSKARDISACMRILHEQYADNVPTTFEELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDGIKEPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C C ++++C
Sbjct: 181 LVYHGREVCTARTKPYCDRCCLADIC 206
>gi|291562481|emb|CBL41297.1| Predicted EndoIII-related endonuclease [butyrate-producing
bacterium SS3/4]
Length = 217
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ ++P L Y + L+V+V L+AQ TD VN + L++
Sbjct: 8 KKELAAKVIAALKKEYPDAGCTLDYNEAWKLLVSVRLAAQCTDARVNVVVQDLYKKFPDV 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++ +R G+ R K+ +I + IL ++ +P + L +LPG+GRK
Sbjct: 68 KALAEADVDEIEEIVRPCGLGRSKARDISACMKILYEQYHGNVPDDFDALLKLPGVGRKS 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+I+ FG P I DTH R++NRIGL G P KVE +L +IIPP+ + + LV
Sbjct: 128 ANLIMGDVFGKPAIVTDTHCIRLTNRIGLVDGIKEPKKVEMALWKIIPPEEGNDFCHRLV 187
Query: 200 LHGRYVCKAR-KPQCQSCIISNLCKR 224
HGR VC AR KP C C ++ C++
Sbjct: 188 EHGRAVCTARTKPYCDKCCLAEFCEK 213
>gi|210613469|ref|ZP_03289728.1| hypothetical protein CLONEX_01935 [Clostridium nexile DSM 1787]
gi|210151169|gb|EEA82177.1| hypothetical protein CLONEX_01935 [Clostridium nexile DSM 1787]
Length = 212
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V V L+AQ TD VN L+E
Sbjct: 1 MRKKELALEVIERLKKEYPDADCTLDYDEAWKLLVGVRLAAQCTDERVNIVVGKLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A K++ +R G+ + K+ +I + IL +E+D IP T E L +LPG+GR
Sbjct: 61 DVNALAAADVDKIEEIVRPCGLGKSKARDISACMKILRDEYDGGIPNTFEELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL K P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGEPAIVTDTHCIRLVNRIGLVKDLKEPKKVEMELWKIIPPQEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
LV HGR VC AR KP C+ C + ++CK+
Sbjct: 181 LVYHGRDVCTARTKPHCERCCLEDICKK 208
>gi|307708822|ref|ZP_07645284.1| endonuclease III [Streptococcus mitis NCTC 12261]
gi|307615188|gb|EFN94399.1| endonuclease III [Streptococcus mitis NCTC 12261]
Length = 209
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLSGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|308069414|ref|YP_003871019.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Paenibacillus polymyxa E681]
gi|305858693|gb|ADM70481.1| Probable endonuclease III (DNA-(apurinic or apyrimidinic site)
lyase) [Paenibacillus polymyxa E681]
Length = 224
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
I +P EL + N F L +AVLLSAQ +D VNK T LF+ +
Sbjct: 1 MNAATARHILDTIGTMFPDAHCELNHDNAFELTIAVLLSAQCSDQMVNKVTADLFQKYKS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ LA+ ++L+ IR IG+YR K+++I +L ILI+++ +IP + L +LPG+GRK
Sbjct: 61 PEDYLAVPLEELEQDIRRIGLYRNKAKHIYNLCRILIDQYGGEIPSEHDQLVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AF +P I VDTH+ RIS R+G A + +VE+ L++ +P H+ L
Sbjct: 121 TANVVVSTAFNVPAIAVDTHVERISKRLGFAGWDDSVLEVEKKLMKRVPRDEWSLTHHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ PQCQ C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQNPQCQVCPLLDVCREGKK 209
>gi|318042669|ref|ZP_07974625.1| endonuclease III [Synechococcus sp. CB0101]
Length = 217
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 106/201 (52%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I +P+ L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRKEERAALILQRLEEHYPTTPVPLDHSDAFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A+ E + +IR +G+ + K+ N+ L+ +L+ +P + + L LPG+G
Sbjct: 61 TPQAMAALPEATILGHIRQLGLAKTKARNVKRLAELLLERHGGDVPASFQALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + E L R+ P H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGVSVTRTETDLKRLFPKHAWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREFCTARGCDGTVCPLC 201
>gi|307706744|ref|ZP_07643549.1| endonuclease III [Streptococcus mitis SK321]
gi|307617829|gb|EFN96991.1| endonuclease III [Streptococcus mitis SK321]
Length = 209
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNK T LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKVTPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|307709222|ref|ZP_07645681.1| endonuclease III [Streptococcus mitis SK564]
gi|307620168|gb|EFN99285.1| endonuclease III [Streptococcus mitis SK564]
Length = 209
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNK T LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKVTPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEKWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|269217530|ref|ZP_06161384.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212465|gb|EEZ78805.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
Length = 190
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 109/183 (59%)
Query: 43 LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYR 102
+ Y N F L+VA +LSAQ+TD VN T LFE P+ + +L++ + +G YR
Sbjct: 1 MDYSNPFELLVATVLSAQTTDARVNTVTPRLFEAYPGPEALAGADRLELEDILHPLGFYR 60
Query: 103 KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
K+ + I L+ L ++P+TLE L +LPG+GRK ANV+L AFG+P I VDTH+ R
Sbjct: 61 AKAASCIGLAASLCANHGGEVPRTLEELVKLPGVGRKTANVVLGNAFGVPGITVDTHVGR 120
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ R + P KVE + R+IP A + ++ HGR VC+ARKP C +C ++++C
Sbjct: 121 LARRWAWTRSEDPVKVEADIARLIPESEWTQACHRIIFHGRQVCRARKPACGACALADVC 180
Query: 223 KRI 225
Sbjct: 181 PSY 183
>gi|15901139|ref|NP_345743.1| endonuclease III [Streptococcus pneumoniae TIGR4]
gi|15903200|ref|NP_358750.1| endonuclease III [Streptococcus pneumoniae R6]
gi|111658506|ref|ZP_01409172.1| hypothetical protein SpneT_02000333 [Streptococcus pneumoniae
TIGR4]
gi|116516035|ref|YP_816604.1| endonuclease III [Streptococcus pneumoniae D39]
gi|148989304|ref|ZP_01820684.1| endonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|148994090|ref|ZP_01823430.1| endonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|148998918|ref|ZP_01826353.1| endonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|149002652|ref|ZP_01827584.1| endonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|149012336|ref|ZP_01833405.1| endonuclease III [Streptococcus pneumoniae SP19-BS75]
gi|149019274|ref|ZP_01834636.1| endonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|168484505|ref|ZP_02709457.1| endonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|168487447|ref|ZP_02711955.1| endonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|168489105|ref|ZP_02713304.1| endonuclease III [Streptococcus pneumoniae SP195]
gi|168491198|ref|ZP_02715341.1| endonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|168493199|ref|ZP_02717342.1| endonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|168575734|ref|ZP_02721649.1| endonuclease III [Streptococcus pneumoniae MLV-016]
gi|169832730|ref|YP_001694704.1| endonuclease III [Streptococcus pneumoniae Hungary19A-6]
gi|182684213|ref|YP_001835960.1| endonuclease III [Streptococcus pneumoniae CGSP14]
gi|225854742|ref|YP_002736254.1| endonuclease III [Streptococcus pneumoniae JJA]
gi|225856940|ref|YP_002738451.1| endonuclease III [Streptococcus pneumoniae P1031]
gi|225859073|ref|YP_002740583.1| endonuclease III [Streptococcus pneumoniae 70585]
gi|225860890|ref|YP_002742399.1| endonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|237649978|ref|ZP_04524230.1| endonuclease III [Streptococcus pneumoniae CCRI 1974]
gi|237821116|ref|ZP_04596961.1| endonuclease III [Streptococcus pneumoniae CCRI 1974M2]
gi|298230791|ref|ZP_06964472.1| endonuclease III [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254281|ref|ZP_06977867.1| endonuclease III [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502724|ref|YP_003724664.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae
TCH8431/19A]
gi|303254475|ref|ZP_07340580.1| endonuclease III [Streptococcus pneumoniae BS455]
gi|303258916|ref|ZP_07344895.1| endonuclease III [Streptococcus pneumoniae SP-BS293]
gi|303261599|ref|ZP_07347546.1| endonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|303264269|ref|ZP_07350189.1| endonuclease III [Streptococcus pneumoniae BS397]
gi|303267149|ref|ZP_07353017.1| endonuclease III [Streptococcus pneumoniae BS457]
gi|303268442|ref|ZP_07354237.1| endonuclease III [Streptococcus pneumoniae BS458]
gi|307067927|ref|YP_003876893.1| putative EndoIII-related endonuclease [Streptococcus pneumoniae
AP200]
gi|14972763|gb|AAK75383.1| endonuclease III [Streptococcus pneumoniae TIGR4]
gi|15458787|gb|AAK99960.1| endonuclease III (DNA repair) [Streptococcus pneumoniae R6]
gi|116076611|gb|ABJ54331.1| endonuclease III [Streptococcus pneumoniae D39]
gi|147755228|gb|EDK62280.1| endonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|147759263|gb|EDK66256.1| endonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|147763662|gb|EDK70597.1| endonuclease III [Streptococcus pneumoniae SP19-BS75]
gi|147925282|gb|EDK76361.1| endonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|147927443|gb|EDK78472.1| endonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|147931144|gb|EDK82123.1| endonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|168995232|gb|ACA35844.1| endonuclease III [Streptococcus pneumoniae Hungary19A-6]
gi|172042290|gb|EDT50336.1| endonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|182629547|gb|ACB90495.1| endonuclease III [Streptococcus pneumoniae CGSP14]
gi|183569713|gb|EDT90241.1| endonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|183572548|gb|EDT93076.1| endonuclease III [Streptococcus pneumoniae SP195]
gi|183574327|gb|EDT94855.1| endonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|183576746|gb|EDT97274.1| endonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|183578378|gb|EDT98906.1| endonuclease III [Streptococcus pneumoniae MLV-016]
gi|225722115|gb|ACO17969.1| endonuclease III [Streptococcus pneumoniae 70585]
gi|225723656|gb|ACO19509.1| endonuclease III [Streptococcus pneumoniae JJA]
gi|225726021|gb|ACO21873.1| endonuclease III [Streptococcus pneumoniae P1031]
gi|225726637|gb|ACO22488.1| endonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|298238319|gb|ADI69450.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae
TCH8431/19A]
gi|301794355|emb|CBW36782.1| putative endonuclease III [Streptococcus pneumoniae INV104]
gi|301802069|emb|CBW34801.1| putative endonuclease III [Streptococcus pneumoniae INV200]
gi|302598561|gb|EFL65602.1| endonuclease III [Streptococcus pneumoniae BS455]
gi|302637179|gb|EFL67667.1| endonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|302639859|gb|EFL70315.1| endonuclease III [Streptococcus pneumoniae SP-BS293]
gi|302642048|gb|EFL72400.1| endonuclease III [Streptococcus pneumoniae BS458]
gi|302643310|gb|EFL73589.1| endonuclease III [Streptococcus pneumoniae BS457]
gi|302646081|gb|EFL76308.1| endonuclease III [Streptococcus pneumoniae BS397]
gi|306409464|gb|ADM84891.1| Predicted EndoIII-related endonuclease [Streptococcus pneumoniae
AP200]
gi|327389514|gb|EGE87859.1| endonuclease III [Streptococcus pneumoniae GA04375]
gi|332073618|gb|EGI84097.1| endonuclease III [Streptococcus pneumoniae GA17570]
gi|332074891|gb|EGI85363.1| endonuclease III [Streptococcus pneumoniae GA41301]
gi|332200724|gb|EGJ14796.1| endonuclease III [Streptococcus pneumoniae GA41317]
gi|332201743|gb|EGJ15813.1| endonuclease III [Streptococcus pneumoniae GA47368]
gi|332203128|gb|EGJ17196.1| endonuclease III [Streptococcus pneumoniae GA47901]
Length = 209
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|307704970|ref|ZP_07641858.1| endonuclease III [Streptococcus mitis SK597]
gi|307621480|gb|EFO00529.1| endonuclease III [Streptococcus mitis SK597]
Length = 209
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|306835036|ref|ZP_07468082.1| endonuclease III [Corynebacterium accolens ATCC 49726]
gi|304569094|gb|EFM44613.1| endonuclease III [Corynebacterium accolens ATCC 49726]
Length = 196
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 111/193 (57%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ + P + EL + + L+VA +LSAQ TD VN T LF T A + L
Sbjct: 1 MAHEHPDARCELDFDSPLQLLVATVLSAQCTDARVNSVTPELFRTYPTAADYAAARREDL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +R +G R K+ +++ + L++EFD ++PQT++ LT LPG+GRK A V+L AFG+
Sbjct: 61 EAILRPLGFQRAKAGHLMGIGERLVSEFDGEVPQTVKELTSLPGVGRKTALVVLGDAFGV 120
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P + VDTH R+ R+ L KTP K+E+ + ++I + ++ HGR C AR P
Sbjct: 121 PGLTVDTHFSRLMQRLELTGEKTPVKIERDIAKLIAEDEWTMFSHRVIFHGRRFCHARNP 180
Query: 212 QCQSCIISNLCKR 224
+C +C++ +LC
Sbjct: 181 ECGNCVVRDLCPA 193
>gi|313891859|ref|ZP_07825464.1| endonuclease III [Dialister microaerophilus UPII 345-E]
gi|329121043|ref|ZP_08249674.1| endonuclease III [Dialister micraerophilus DSM 19965]
gi|313119853|gb|EFR43040.1| endonuclease III [Dialister microaerophilus UPII 345-E]
gi|327471205|gb|EGF16659.1| endonuclease III [Dialister micraerophilus DSM 19965]
Length = 213
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 131/207 (63%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEI-FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K ++EI + L Y + FTL+VAV+LSAQ TD VN TK +F
Sbjct: 1 MKINKSVKEIQLQRLEKYYGEYNTALEYTSPFTLLVAVILSAQCTDKRVNIITKRIFPKL 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
DTP KM+ + + +L+ IR G+Y+ K+++++ + ++L+ E++ ++P + E L +LPG+G
Sbjct: 61 DTPAKMVKLSQSELEKEIRDCGLYKSKAKHLLGMCNVLLKEYNGEVPHSFEDLIKLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+ S+A+G P I VDTH+FR+SNR+ LA GK P VE L + +P + H+W
Sbjct: 121 RKTANVVRSVAWGYPAIAVDTHVFRVSNRLNLAKGKKPLDVELELQKTVPKEKWSACHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ HGR C AR P C++C +S++C
Sbjct: 181 LIWHGRKFCHARNPDCKNCFLSDVCPS 207
>gi|124025549|ref|YP_001014665.1| putative endonuclease [Prochlorococcus marinus str. NATL1A]
gi|123960617|gb|ABM75400.1| putative endonuclease [Prochlorococcus marinus str. NATL1A]
Length = 217
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 119/202 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ I +P L + N FTL+VAV+LSAQSTD VN+ TK LF++A
Sbjct: 1 MKKDERIKIIIKRLEEIYPETPIPLDHQNGFTLLVAVVLSAQSTDKKVNELTKELFKVAP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +KM +GE K+ NYI+ +G+ + K++N +LS I+ +F+N IP + + L LPG+G
Sbjct: 61 SAEKMYKLGENKIYNYIKQLGLAKTKAKNTHNLSKIIYEKFNNIIPNSFQELESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG+P+ VDTHI R+S R GL GK + E+ L R+ P H +
Sbjct: 121 KTASVVMSQVFGVPSFPVDTHIHRLSQRWGLTSGKNVIQTEKDLKRLFPKNLWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR +C +
Sbjct: 181 IFYGREYCSARGCNGTNCNLCK 202
>gi|291523946|emb|CBK89533.1| Predicted EndoIII-related endonuclease [Eubacterium rectale DSM
17629]
Length = 212
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K E+ +P L Y + L+V+V L+AQ TD VN LF+
Sbjct: 1 MTKEKLAIEVIKRLKTAYPRTDCTLEYDEAWKLLVSVRLAAQCTDARVNVVVVDLFKKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + ++ +R G+ + K+ +I + +L ++F +P + L +LPG+GR
Sbjct: 61 SIEALADADVSDIEEIVRPCGLGKSKARDISACMRMLRDDFGGLVPDNMTDLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ +G P I DTH R+ NRIGL G P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVYGKPAIVTDTHCIRLCNRIGLVDGIKDPKKVEMELWKIIPPEESNDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR P C C+++++C
Sbjct: 181 LVDHGRAVCTARTTPHCDMCVLNDIC 206
>gi|332876792|ref|ZP_08444550.1| endonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685351|gb|EGJ58190.1| endonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 222
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F P + EL+Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MKKQELYDRVIAYFEQAIPVAETELHYHDPFQLLVAVILSAQCTDKRVNMITPPLFRDYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + YIR++ K+++++ ++ +L+ + +++P L+ L +LPG+GR
Sbjct: 61 TPEAMAAATPETIYEYIRSVSYPNNKAKHLVGMARMLVENYHSEVPSDLDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ F + VDTH+FR+S+RIGL P P VE+ L+R P AH+
Sbjct: 121 KTANVIQAVVFEKAAMAVDTHVFRVSHRIGLVPDTCTTPYSVEKQLVRYFPDPIIPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRY C AR P+C+ C + +C+
Sbjct: 181 WLILHGRYTCTARTPKCEVCGLKMICRHY 209
>gi|218135014|ref|ZP_03463818.1| hypothetical protein BACPEC_02919 [Bacteroides pectinophilus ATCC
43243]
gi|217990399|gb|EEC56410.1| hypothetical protein BACPEC_02919 [Bacteroides pectinophilus ATCC
43243]
Length = 210
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K E+ ++P L Y + + L+V+V L+AQ TD VN + LF+
Sbjct: 1 MTKKKLALEVIEKLKNEYPDAACTLDYDDAWKLLVSVRLAAQCTDARVNVVVEGLFDKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++N +R G+ R K+ +I + +L ++ + +P + L +LPG+GR
Sbjct: 61 SVAALAEADVDDIENIVRPCGLGRSKARDISACMKMLHEKYSDTVPDDFDELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R++NRIGL P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLANRIGLVDNIKEPKKVEMALWKIIPPEEGSDLCHR 180
Query: 198 LVLHGRYVCKARK-PQCQSCIISNLCKR 224
LV+HGR VC AR P C C ++++C++
Sbjct: 181 LVIHGREVCTARTAPYCDRCCLADICRK 208
>gi|281423216|ref|ZP_06254129.1| endonuclease III [Prevotella oris F0302]
gi|281402552|gb|EFB33383.1| endonuclease III [Prevotella oris F0302]
Length = 229
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F + EL + + F LIVA LLSAQ TD +N T L+
Sbjct: 1 MTRKERFNYILDYFRKEQGPVTTELEFGSAFQLIVATLLSAQCTDKRINMITPELYRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M + + I+++ K+ ++ ++ IL+ F+ ++P + LT+LPG+GR
Sbjct: 61 TAEAMAQADWEDIFQLIKSVSYPNSKAHHLSEMAKILVERFNGEVPDNTDDLTQLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP NAH+
Sbjct: 121 KTANVVQAVWFGKPTLAVDTHVYRVSHRLGLVPETANTPLKVELELMKYIPKADVGNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRY+CK++KPQCQ C + C
Sbjct: 181 WLLLHGRYICKSQKPQCQDCPFNTFCP 207
>gi|138895748|ref|YP_001126201.1| endonuclease III [Geobacillus thermodenitrificans NG80-2]
gi|196248630|ref|ZP_03147330.1| endonuclease III [Geobacillus sp. G11MC16]
gi|134267261|gb|ABO67456.1| Endonuclease III [Geobacillus thermodenitrificans NG80-2]
gi|196211506|gb|EDY06265.1| endonuclease III [Geobacillus sp. G11MC16]
Length = 223
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T +++ + +P EL + N F L++AV+LSAQ TD VNK TK LFE
Sbjct: 1 MLTKQQIRYCLDEMANMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +A+ ++L+ IR+IG+YR K++NI L +LI E++ ++P+ + L +LPG+GR
Sbjct: 61 TPHDYIAVPLEELEQDIRSIGLYRNKAKNIQKLCAMLIEEYNGEVPRDRDELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFG+P I VDTH+ R+S R+G + +VEQ+L+R IP + H+
Sbjct: 121 KTANVVASVAFGVPAIAVDTHVERVSKRLGFCRWNDSVLEVEQTLMRKIPKEEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC C + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQAPQCPVCPLLHLCREGKK 210
>gi|311085863|gb|ADP65945.1| endonuclease III [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
Length = 210
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 137/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ EI + S P PK EL++ + F L+++V+LSAQSTD VNK TK LF+IA+T
Sbjct: 1 MNKKKRYEILSILSRNNPEPKIELFFSSDFELLLSVILSAQSTDFIVNKTTKILFKIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +G ++L+NYI+ IG+Y K+ NII S I++ ++++ +P L LPG+GRK
Sbjct: 61 PETIFLLGLERLKNYIKDIGLYNTKALNIIRTSFIILTKYNSIVPNNRIELESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+IL++ F TI VDTH+FR+ NR A GK VE+ L++++P + N H W +
Sbjct: 121 TANIILNILFKKKTIAVDTHVFRVCNRTNFAKGKNVKIVEEKLIKVVPSIFKLNFHSWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARK +C C+I LC+ K+
Sbjct: 181 LHGRYICTARKIKCNICLIFKLCEFKKK 208
>gi|284989118|ref|YP_003407672.1| endonuclease III [Geodermatophilus obscurus DSM 43160]
gi|284062363|gb|ADB73301.1| endonuclease III [Geodermatophilus obscurus DSM 43160]
Length = 276
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 104/194 (53%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ P EL + N F L+VA +LSAQ+TD VN+ T LF Q + +L
Sbjct: 60 LAVIHPDAHCELDFTNAFELLVATVLSAQTTDKTVNRVTPVLFAKYPDAQALAGADRAEL 119
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ ++ G +R K+ +++ L+ L+ FD ++P + L LPG+GRK ANV+L AF +
Sbjct: 120 EEVLKPTGFFRAKANSVLGLAQALLERFDGEVPGRMADLVTLPGVGRKTANVVLGNAFDV 179
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P + VDTH R+ R G + P +VE + +IP + + ++ HGR VC A+K
Sbjct: 180 PGLTVDTHFGRLVRRFGWTAEEDPVRVEAEVAELIPKREWTMFSHRVIFHGRRVCHAKKA 239
Query: 212 QCQSCIISNLCKRI 225
C +C ++ C
Sbjct: 240 ACGACGLARWCPSY 253
>gi|154149294|ref|YP_001406776.1| endonuclease III [Campylobacter hominis ATCC BAA-381]
gi|153805303|gb|ABS52310.1| endonuclease III [Campylobacter hominis ATCC BAA-381]
Length = 212
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T KE+ EI LF + P EL + + + LIV V+LSAQ TD VN T LF
Sbjct: 1 MRTKKEISEIKKLFLEHFEKPTTELKFKSPYELIVCVMLSAQCTDKRVNLITPSLFAEFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ L+ I + + K++N+I ++ ++ F+ +IP + L L G+G+
Sbjct: 61 DIFALSNANLASLKILIGSCSFFNNKAKNLIKMAKAVVENFNGEIPLNEKDLMSLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L G + VDTH+FR+S+R+GL+ KTP E L +I H +
Sbjct: 121 KTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSTAKTPELTEADLTKIF-KTDLNYLHQAM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VL GRY+CKA KP+C+ C + +C +
Sbjct: 180 VLFGRYICKAIKPKCEECFLYEVCDSKDK 208
>gi|46204880|ref|ZP_00209603.1| COG0177: Predicted EndoIII-related endonuclease [Magnetospirillum
magnetotacticum MS-1]
Length = 247
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 101/197 (51%), Positives = 143/197 (72%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
IF P P+ EL Y+N +TL+VAV+LSAQ+TD +VN AT LF +ADTP+KMLA+G
Sbjct: 37 IFSRLRAADPEPRSELEYINPYTLLVAVVLSAQATDKSVNLATAPLFALADTPEKMLALG 96
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E++++++IRTIG++ K++N+I+LS ILI ++P+ E L LPG+G K A+V+L++
Sbjct: 97 EERVRHFIRTIGLFNTKAKNVIALSRILIERHGGEVPREAEALEVLPGVGTKTASVVLNV 156
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG+P I VDTHIFR+SNRI L T +KV+ L +P + NAH+WL+LHGRY CK
Sbjct: 157 AFGVPRIAVDTHIFRVSNRIPLFVAPTTDKVQAGLEARVPEPFRLNAHHWLILHGRYTCK 216
Query: 208 ARKPQCQSCIISNLCKR 224
AR+P C C I++LC+
Sbjct: 217 ARRPDCPRCAIADLCRY 233
>gi|163755316|ref|ZP_02162436.1| endonuclease III [Kordia algicida OT-1]
gi|161324736|gb|EDP96065.1| endonuclease III [Kordia algicida OT-1]
Length = 222
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 116/191 (60%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P L + + +TL++AVL+SAQSTDV VN+ T LFE AD
Sbjct: 1 MTKQEKVQFVIDTLEKIYPEIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++++ IR +G+ KS+ I LSHILI++ + ++P+TLE L LP +G
Sbjct: 61 NPYDMIKLSVEEIRDIIRPVGLSPMKSKGIHGLSHILIDKHNGEVPRTLEELEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R L+ GK + E+ R+ P + + H +
Sbjct: 121 KTASVVISQAFGIPAFPVDTHIHRLMYRWNLSNGKNVVQTEKDAKRLFPKEKWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR C AR
Sbjct: 181 IWYGREYCPAR 191
>gi|326560410|gb|EGE10792.1| endonuclease III [Moraxella catarrhalis 7169]
gi|326561365|gb|EGE11721.1| endonuclease III [Moraxella catarrhalis 46P47B1]
gi|326564013|gb|EGE14258.1| endonuclease III [Moraxella catarrhalis 103P14B1]
gi|326565853|gb|EGE16015.1| endonuclease III [Moraxella catarrhalis BC1]
gi|326570510|gb|EGE20550.1| endonuclease III [Moraxella catarrhalis BC8]
gi|326571193|gb|EGE21217.1| endonuclease III [Moraxella catarrhalis BC7]
gi|326573111|gb|EGE23080.1| endonuclease III [Moraxella catarrhalis CO72]
gi|326576129|gb|EGE26045.1| endonuclease III [Moraxella catarrhalis 101P30B1]
gi|326577082|gb|EGE26976.1| endonuclease III [Moraxella catarrhalis O35E]
Length = 217
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 89/203 (43%), Positives = 135/203 (66%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ F + P EL+Y + F L++AV+LSAQ+TD +VN AT LF++A+T
Sbjct: 1 MNANKRLVFFQKLAKHIKEPVTELHYTSEFELLIAVMLSAQATDKSVNIATDKLFKVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ +L +G L++YI +IG+Y K+ N+I LI + + ++P+T + L L G+GRK
Sbjct: 61 PKAILDLGLDNLKSYISSIGLYNSKAANVIKTCQDLITKHNGQVPRTRDELEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L+ AFG P + VDTHIFR+ NR GLA GKT VE++L++ IP K +AH++L+
Sbjct: 121 TANVVLNTAFGEPVMAVDTHIFRVGNRTGLATGKTVLAVEKALMKRIPAKFLVDAHHYLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
LHGRY C AR+P+C +C++ + C
Sbjct: 181 LHGRYTCTARQPKCGACVVFDEC 203
>gi|251810880|ref|ZP_04825353.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876114|ref|ZP_06284981.1| endonuclease III [Staphylococcus epidermidis SK135]
gi|251805560|gb|EES58217.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295139|gb|EFA87666.1| endonuclease III [Staphylococcus epidermidis SK135]
gi|329737287|gb|EGG73541.1| endonuclease III [Staphylococcus epidermidis VCU028]
Length = 219
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ ++ + + +P+ + EL + N F L +AVLLSAQ TD VN+ T+ LF
Sbjct: 1 MISKKKALQMIDVIADMFPNAECELNHRNAFDLTIAVLLSAQCTDNLVNRVTQSLFRKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + +++LQN IR+IG+YR K++NI L H LI +F+ +IPQT + L L G+GR
Sbjct: 61 TPEDYLNVSDEELQNDIRSIGLYRNKAKNIKKLCHSLIEQFNGQIPQTHKELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P++ VDTH+ R+S R+G+ + +VE L IIP +H+
Sbjct: 121 KTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDSVRQVEDRLCDIIPRDRWNKSHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C+ C + C+ ++
Sbjct: 181 LIFFGRYHCLARKPKCEICPLLYDCREGQK 210
>gi|124485824|ref|YP_001030440.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanocorpusculum labreanum Z]
gi|124363365|gb|ABN07173.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanocorpusculum labreanum Z]
Length = 216
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 25 LEEIFYLFSLKWPSPKGE---LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E I ++P + E L + N F L++ +LSAQ+TDV +N LF P
Sbjct: 6 AESILEELDHQYPCNQDEMNFLKFRNPFELLIMTILSAQTTDVTINGLRDELFSAYPNPA 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ I + G Y K++NII + +L F +P+T+E LT LPG+GRK A
Sbjct: 66 ALARADPLDVERIIHSAGFYHSKAKNIIGTAKMLEENFGGVVPRTIEELTTLPGVGRKTA 125
Query: 142 NVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
N++ + AF I VDTH+ R+S +IG P K+E+ L+++ P K +Y L+
Sbjct: 126 NIVTNHAFHEACGIAVDTHVRRLSKKIGFTQNTDPEKIEKDLMKLFPEKWWSKINYLLIR 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR VC A+KP C CII + C+
Sbjct: 186 HGRAVCTAKKPDCMKCIIRHNCQSY 210
>gi|325479490|gb|EGC82586.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 35 KWPSPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
+P L + F L+VA +LSAQSTDV VNK TK +F +TP++ K ++N
Sbjct: 1 MYPDVDYSMLNFTTPFELLVATILSAQSTDVRVNKVTKVMFADMNTPEEFAKADIKTIEN 60
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
YIRT+GIY+ K++NI + S IL N++++++P ++ L +LPG+GRK ANV+ S AFGIP
Sbjct: 61 YIRTVGIYKNKAKNISATSKILYNDYNSEVPADIKELMKLPGVGRKTANVVASNAFGIPA 120
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
I VDTH+FR++NR+GLA K K E L++ IP + H+ L+ HGR +CKAR P C
Sbjct: 121 IAVDTHVFRVANRLGLASAKNVEKTEDQLMKNIPKERWRKTHHQLITHGRAICKARNPLC 180
Query: 214 QSCIISNLCKRIKQ 227
+ C + C+ ++
Sbjct: 181 EECNMKITCEYYRR 194
>gi|294674100|ref|YP_003574716.1| endonuclease III [Prevotella ruminicola 23]
gi|294473695|gb|ADE83084.1| endonuclease III [Prevotella ruminicola 23]
Length = 211
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F K P EL + + F L+VAV+LSAQ TD +N+ T LF
Sbjct: 1 MKKKERYDLILEHFREKMPLVTTELDFGSTFQLLVAVVLSAQCTDKRINQVTPDLFAHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
Q M E+ + +IR++ K+++++ ++ +L+ +F+ ++P TL+ L LPG+GR
Sbjct: 61 DAQSMAKAEEEDIFEWIRSVSYPNAKAKHLVEMARVLMEKFNGEVPSTLDELLTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI S+AFG T+ VDTH+FR+++R+GL TP KVE +L + IP + NAH+
Sbjct: 121 KTANVIQSVAFGKATLAVDTHVFRVAHRLGLVSKSDNTPYKVEMALTKYIPEEDIPNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC ARKP C+ C I C +I
Sbjct: 181 WLLLHGRYVCTARKPHCEKCEIEKYCAKI 209
>gi|310825899|ref|YP_003958256.1| hypothetical protein ELI_0274 [Eubacterium limosum KIST612]
gi|308737633|gb|ADO35293.1| hypothetical protein ELI_0274 [Eubacterium limosum KIST612]
Length = 213
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY--VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K I ++P + L Y + L+V+V L+AQ TD VN K L+
Sbjct: 1 MTKEKRALAIIDRLKKEYPDAECSLEYDPKEAWRLLVSVRLAAQCTDARVNVVVKELYAK 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ ++++ +R G+ + K+ +I + IL +++D +P + L +LPG+
Sbjct: 61 FPDVAALAQAEPEEIEAIVRPCGLGKSKARDISACMKILRDQYDGMVPDDFDALLKLPGV 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK AN+I+ FG P I DTH R+ NR+GL K P KVE +L ++IPP+ +
Sbjct: 121 GRKSANLIVGDVFGKPAIVTDTHCIRLVNRMGLVENTKDPKKVEMALWKLIPPEEGNSFC 180
Query: 196 YWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ LVLHGR +C AR KP C C ++++C++
Sbjct: 181 HRLVLHGREICTARTKPHCDRCCLADICEK 210
>gi|257069732|ref|YP_003155987.1| endonuclease III [Brachybacterium faecium DSM 4810]
gi|256560550|gb|ACU86397.1| endonuclease III [Brachybacterium faecium DSM 4810]
Length = 230
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+S S P G P + + + + EL + + F L+VA +LSAQ+
Sbjct: 1 MSMSTPRSTDLPRPAG----PADASRVASRLAALHAEARTELDHRDAFELLVATVLSAQT 56
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TDV VN+ T LF P + A E + +R +G+ ++ +I L+ L+
Sbjct: 57 TDVRVNQVTPELFSRWPDPAALAAADEGAVTEVVRPLGMGATRARRLIGLAQGLLARHGG 116
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P L LPG+GRK A+V+ FG + VDTH+ R++ R+G TP +VE+
Sbjct: 117 EVPDDQAALEALPGVGRKTAHVVRGAWFGHSLLAVDTHVGRLAQRLGWTTATTPRRVEED 176
Query: 182 LLRII-------PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ + P + L+LHGR VC AR P+C C + +LC R
Sbjct: 177 VVARVEADGTGAPEEDLTILGLRLILHGRRVCTARAPRCGQCALVDLCPR 226
>gi|254526684|ref|ZP_05138736.1| endonuclease III [Prochlorococcus marinus str. MIT 9202]
gi|221538108|gb|EEE40561.1| endonuclease III [Prochlorococcus marinus str. MIT 9202]
Length = 217
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 119/201 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N +TL+VAV+LSAQSTD VN+ TK LF++AD
Sbjct: 1 MRKSERAEIIRKELKKLYPSPPIPLDHSNAYTLLVAVVLSAQSTDKKVNELTKSLFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+KM+ +G K + YI+ +G+ +KS+NI +LS +LI + + +P T E L LPG+G
Sbjct: 61 NPEKMVELGIKGIYEYIKFLGLSNQKSKNIYNLSKLLIEKHKSIVPNTFEALESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F IP+ VDTHI R+S R GL+ G + + E+ L +I P H +
Sbjct: 121 KTASVVMSQVFKIPSFPVDTHIHRLSQRWGLSNGDSVVQTEKDLKKIFPVNDWNALHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTKCYLC 201
>gi|269123280|ref|YP_003305857.1| endonuclease III [Streptobacillus moniliformis DSM 12112]
gi|268314606|gb|ACZ00980.1| endonuclease III [Streptobacillus moniliformis DSM 12112]
Length = 215
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ K+ +PK L Y N + L+VAV+LSAQ TD VN T+ F++ +
Sbjct: 1 MTKKDRVKQVLEALRNKFKNPKIALNYNNEYQLMVAVILSAQCTDKRVNIVTEEFFKVIE 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ M + ++++ YI++ G Y+ K+ N+ + + ILI +++ +P+T+E L +LPG+GR
Sbjct: 61 KPEDMEKLSLEEVERYIKSTGFYKNKALNLKANAKILIEKYNGVLPRTMEELIKLPGVGR 120
Query: 139 KGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ + I VDTH+ R+SN IG +E+ L++IIP K+ Y ++
Sbjct: 121 KTANVLLGDLWGIREGIVVDTHVRRLSNLIGFVDNDNVEIIERELMKIIPKKYWYEYSHF 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGR C AR+P+C C I +LCK ++
Sbjct: 181 LILHGRDKCIARRPKCHECEIKHLCKYNEK 210
>gi|262195685|ref|YP_003266894.1| endonuclease III [Haliangium ochraceum DSM 14365]
gi|262079032|gb|ACY15001.1| endonuclease III [Haliangium ochraceum DSM 14365]
Length = 220
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 112/203 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + +P P L + + FTL+VAVLLSAQ TD VN T LF AD
Sbjct: 1 MRRQDKADRILAILDELFPEPPIPLDHSDPFTLLVAVLLSAQCTDQRVNLVTPALFAAAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A+ + ++ +IR+ G+ K++NI +LS IL ++P L+ L LPG+G
Sbjct: 61 TPADMAALEQAEILGHIRSCGLAPAKAKNIRALSEILCERHGGQVPAQLDALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ + + E+ L ++ P + H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAGRWGLSRARNVVETERDLKKLFPEQRWNTVHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNL 221
+ GR C AR +C I +
Sbjct: 181 IYFGRAYCPARGHDFATCPICHW 203
>gi|270340077|ref|ZP_06006953.2| endonuclease III [Prevotella bergensis DSM 17361]
gi|270332749|gb|EFA43535.1| endonuclease III [Prevotella bergensis DSM 17361]
Length = 226
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + I F P+ EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 10 IMTRKERYRYILDYFRTHNPNVGTELDFGSAFQLLCATLLSAQCTDKRINAITPELFRRY 69
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T +M ++ Y+R++ KS +++ ++ +L+ +D +P+ + +LPG+G
Sbjct: 70 PTATEMSKAEPAEVFEYVRSVSYPNSKSRHLVEMARMLVEHYDGDVPEDPREMMKLPGVG 129
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAH 195
RK ANVI ++ FG + VDTH++R+S+R+GL P TP KVE+ L+R IP + +AH
Sbjct: 130 RKTANVIQAVWFGKAAMAVDTHVYRVSHRLGLVPKTANTPLKVEEWLMRSIPEEDIPDAH 189
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+WL+LHGRYVC++ +PQC++C + C ++
Sbjct: 190 HWLLLHGRYVCRSVRPQCENCPFDSFCPKL 219
>gi|229546166|ref|ZP_04434891.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
TX1322]
gi|256852805|ref|ZP_05558175.1| endonuclease III [Enterococcus faecalis T8]
gi|307291137|ref|ZP_07571022.1| endonuclease III [Enterococcus faecalis TX0411]
gi|229308690|gb|EEN74677.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecalis
TX1322]
gi|256711264|gb|EEU26302.1| endonuclease III [Enterococcus faecalis T8]
gi|306497791|gb|EFM67323.1| endonuclease III [Enterococcus faecalis TX0411]
gi|315030680|gb|EFT42612.1| endonuclease III [Enterococcus faecalis TX4000]
Length = 215
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSQEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLARAPKCEACPLLYMCQEGKE 210
>gi|291520827|emb|CBK79120.1| Predicted EndoIII-related endonuclease [Coprococcus catus GD/7]
Length = 210
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ + +P + L Y + L+V+V L+AQ TD VN + L+E
Sbjct: 1 MTKEELTLEVIRRLKVAYPLAECTLDYDQAWKLLVSVRLAAQCTDARVNVVVEGLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A ++ +R G+ + K+ +I + IL ++ +K+P L +LPG+GR
Sbjct: 61 DVASLAAADVTDIEEIVRPCGLGKSKARDISACMKILHEQYHDKVPDDFNALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIG+ G P KVE +L +++PP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGIVDGIKDPKKVEMALWKLVPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C C ++++C
Sbjct: 181 LVEHGREVCTARTKPYCDKCCLADIC 206
>gi|194398645|ref|YP_002037882.1| endonuclease III [Streptococcus pneumoniae G54]
gi|194358312|gb|ACF56760.1| endonuclease III [Streptococcus pneumoniae G54]
Length = 209
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIISLFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|292655011|ref|YP_003534908.1| endonuclease III [Haloferax volcanii DS2]
gi|291372240|gb|ADE04467.1| endonuclease III [Haloferax volcanii DS2]
Length = 227
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ EE+ ++P L Y N L++AV+LSAQ TD VNK T LFE D
Sbjct: 8 REAQAEEVLDRLYEEYPDTTISLSYSNRLELLIAVMLSAQCTDERVNKVTAELFEKYDDA 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
A +++L + I +I Y K++ I S +I + D ++P T+ LT L G+GRK
Sbjct: 68 ADYAAADQEELADDISSITYYNNKAKYIRSACADIIEKHDGEVPDTMSALTDLAGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L I I VDTH+ R+S R+GL + P ++E+ L+ ++P + + +
Sbjct: 128 ANVVLQHGHDIVEGIVVDTHVQRLSRRLGLTEEEYPERIEEDLMPVVPERDWQQFTHLFI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR VC AR P C +C++ +LC K+
Sbjct: 188 SHGRAVCDARNPDCDACVLEDLCPSSKR 215
>gi|281420062|ref|ZP_06251061.1| endonuclease III [Prevotella copri DSM 18205]
gi|281405862|gb|EFB36542.1| endonuclease III [Prevotella copri DSM 18205]
Length = 215
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F P+ EL + + F L+VA LLSAQ TD +N T LF
Sbjct: 1 MLRKERYDFILNHFRSALPNVTTELQFGSAFQLLVATLLSAQCTDKRINMVTPALFARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
Q M E+ + I ++ K++++ +S L+ F ++P+ + L +L G+GR
Sbjct: 61 DAQHMAQASEEDIYELISSVSYPNAKAKHLAEMSRQLVEMFGGEVPEAADDLEKLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ FG T+ VDTH++R+S+R+GL P TP KVE L++ IP + NAH+
Sbjct: 121 KTANVIRAVWFGHATMAVDTHVYRVSHRMGLVPKTADTPRKVEDYLMKHIPAEDIPNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
W++LHGRY+CK+ KP C C + C ++
Sbjct: 181 WILLHGRYICKSTKPLCDKCFFNEYCPKL 209
>gi|160878304|ref|YP_001557272.1| endonuclease III [Clostridium phytofermentans ISDg]
gi|160426970|gb|ABX40533.1| endonuclease III [Clostridium phytofermentans ISDg]
Length = 229
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Query: 22 PKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ I L + K L + + L++A +LSAQ TD VN TK LF +
Sbjct: 17 KERIDAILALLDEHYSTEYKCYLNHETPWQLLIATILSAQCTDERVNIVTKDLFVKYKSV 76
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L+ I + G YR K++NII+ L+ E+ ++P ++ LT L G+GRK
Sbjct: 77 EDFANADLSELEKDIHSTGFYRNKAKNIIACCQTLLREYHGEVPNDIDALTNLAGVGRKT 136
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI F P+I VDTH+ RIS ++G P KVE L++I+P +H + ++
Sbjct: 137 ANVIRGNIFHEPSIVVDTHVKRISKKLGFTKEDDPVKVEYDLMKILPREHWILYNIQIIT 196
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
HGR +C AR PQC C +S+LCK
Sbjct: 197 HGRGLCTARSPQCDRCFLSHLCK 219
>gi|315646506|ref|ZP_07899624.1| endonuclease III [Paenibacillus vortex V453]
gi|315278149|gb|EFU41469.1| endonuclease III [Paenibacillus vortex V453]
Length = 228
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ I +P EL + N F L +AVLLSAQ TD VNK TK LF+ T
Sbjct: 1 MNAATVRHILDTMESMFPDAHCELVHSNAFELTIAVLLSAQCTDETVNKVTKDLFQKYKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P +++ ++L+ IR IG+YR K+++I +L ILI ++ ++P+ + L +LPG+GRK
Sbjct: 61 PLDYVSVPIEELEQDIRRIGLYRNKAKHIQNLCSILIEQYGGEVPEAHDELVKLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S AFG+P I VDTH+ R+S R+GLA + +VE+ L++ +P + H+ +
Sbjct: 121 TANVVVSNAFGVPAIAVDTHVERVSKRLGLAGWKDSVLEVEKKLMKRVPREEWTLTHHRI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA+ PQCQ C + ++C+ K+
Sbjct: 181 IFFGRYHCKAQNPQCQVCPLLDVCREGKK 209
>gi|315640880|ref|ZP_07895977.1| endonuclease III [Enterococcus italicus DSM 15952]
gi|315483358|gb|EFU73857.1| endonuclease III [Enterococcus italicus DSM 15952]
Length = 215
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ +P GEL + N F L++AV+LSAQ+TD++VNK T LF
Sbjct: 1 MISKQKTLIALQKMMDMYPEAHGELVHKNAFELLIAVILSAQATDISVNKVTPDLFAKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P ++ YI++IG++R K++NI S LI +D ++P + E L L G+GR
Sbjct: 61 DPAAFANASVNEIIPYIKSIGLFRNKAKNIQLCSQQLIATYDGQVPASREELMSLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFG+P I VDTH+ RIS R+ + +VE++L++ IP AH+
Sbjct: 121 KTANVVLGDAFGVPAIAVDTHVERISKRLRICKLTANVIEVEETLMKKIPENLWIRAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY C ARKP C C + ++C+ K
Sbjct: 181 MIFFGRYHCTARKPNCAQCPLLDMCQEGK 209
>gi|330995722|ref|ZP_08319620.1| endonuclease III [Paraprevotella xylaniphila YIT 11841]
gi|329574781|gb|EGG56342.1| endonuclease III [Paraprevotella xylaniphila YIT 11841]
Length = 222
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 124/209 (59%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F P + EL+Y + F L+VAV+LSAQ TD VN T LF
Sbjct: 1 MKKQELYDRVIAYFEQAMPVAETELHYHDPFQLLVAVILSAQCTDKRVNMITPPLFRDYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A + + Y+R++ K+++++ ++ +L+ + +++P L+ L +LPG+GR
Sbjct: 61 TPEAMAAATPETIYEYVRSVSYPNNKAKHLVGMARMLVENYHSEVPSDLDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ F + VDTH+FR+S+RIGL P P VE+ L+R P AH+
Sbjct: 121 KTANVIQAVVFEKAAMAVDTHVFRVSHRIGLVPATCTTPYSVEKQLVRYFPAPIIPKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRY C AR P+C++C + +C+
Sbjct: 181 WLILHGRYTCTARTPKCEACGLKMICRHY 209
>gi|317499730|ref|ZP_07957987.1| endonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
gi|316892980|gb|EFV15205.1| endonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
Length = 210
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN K LFE
Sbjct: 1 MNKKELALEVIERLKNEYPDADCTLEYDQAWKLLVSVRLAAQCTDARVNVVVKGLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + A ++ +R G+ + K+ +I +L +E++ KIP + + LPG+GR
Sbjct: 61 TVEALAAADVADIEEIVRPCGLGKSKARDISKCMKVLRDEYNGKIPTDFKSILSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIKDPKKVEMALWEIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C+ C ++++C
Sbjct: 181 LVWHGRDVCTARTKPHCERCCLNDIC 206
>gi|257898638|ref|ZP_05678291.1| endonuclease III [Enterococcus faecium Com15]
gi|257836550|gb|EEV61624.1| endonuclease III [Enterococcus faecium Com15]
Length = 225
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKQKTMEALETMYEMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P T E L LPG+GR
Sbjct: 61 TPDALADAPIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTTREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + + +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDASVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C A+ P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTAKNPKCEVCPLLSICQDGK 209
>gi|322376827|ref|ZP_08051320.1| endonuclease III [Streptococcus sp. M334]
gi|321282634|gb|EFX59641.1| endonuclease III [Streptococcus sp. M334]
Length = 209
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSAATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMGILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|223940701|ref|ZP_03632540.1| endonuclease III [bacterium Ellin514]
gi|223890628|gb|EEF57150.1| endonuclease III [bacterium Ellin514]
Length = 221
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 116/213 (54%), Gaps = 1/213 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
S ++I +P EL + N L++A +LSAQ TD VN T L
Sbjct: 2 SRESVQDKQSRTQKILAGLKKAYPDAHCELVHANPLQLLIATILSAQCTDKQVNIVTADL 61
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F+ T + + +N IR IG+YR K++NI + L+ ++ ++P+T+E L L
Sbjct: 62 FKKYKTAADFANVDSTQFENDIRRIGLYRNKAKNIQACCRDLVEKYGGEVPRTMEQLIEL 121
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
G+GRK ANV+L AF I I VDTH+ R+SNR+GL + P K+E++L++++P
Sbjct: 122 GGVGRKTANVVLGNAFNINCGIVVDTHVARLSNRLGLTKEQAPEKIERALVKLVPQSEWT 181
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR C AR P C +C + LC RI
Sbjct: 182 LLSHLLIWHGRRRCFARNPDCLNCEVRPLCPRI 214
>gi|160893761|ref|ZP_02074545.1| hypothetical protein CLOL250_01315 [Clostridium sp. L2-50]
gi|156864746|gb|EDO58177.1| hypothetical protein CLOL250_01315 [Clostridium sp. L2-50]
Length = 214
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 19 LYTPKE--LEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ + EI + + + K L + N + L++A +LSAQ TD VN TK LF
Sbjct: 1 MTKKEKQQVAEICRILNETYGTDYKCYLNHENAWQLLIATMLSAQCTDARVNIVTKDLFV 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q K+L+ I + G Y+ K++NII + LI+E+ ++P +E LT+L G
Sbjct: 61 KYPTLQAFADADIKELEKDIYSTGFYKNKAKNIIGCAKKLISEYGGEVPSDIESLTKLDG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK ANVI + P+I VDTH+ RIS +GL P K+E L+ +P + +
Sbjct: 121 VGRKTANVIRGNIYHEPSIVVDTHVKRISRLLGLTDSDDPVKIEHELMEKLPKEQWILYN 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ GR +C AR+P+C C ++ +C
Sbjct: 181 IQIITLGRTICIARRPKCAECALNRVCPS 209
>gi|212550403|ref|YP_002308720.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548641|dbj|BAG83309.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 217
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ F + EL Y + F L++AV+L+AQ TD VN T LF
Sbjct: 1 MGIKERCAKVIDWFEKNMSRAETELCYTDPFQLLIAVVLAAQCTDKRVNLITPTLFNAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + E + YI++I + KS+ +++++ +L+ + ++P ++ L +LPG+GR
Sbjct: 61 TPEILASSNEDVIYEYIKSISYPKNKSKFLLAMAKMLVASYAGQVPSNIKELMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFGIP I VDTH+FR+SNRIGL +TP + E L + IP K AH+W
Sbjct: 121 KTANVVASIAFGIPAIAVDTHVFRVSNRIGLTNHTQTPIQTEYVLTKHIPKKLWTKAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+LHGRY+C ARKP C +C + C +
Sbjct: 181 LILHGRYICIARKPHCYNCGLKEFCDYFSK 210
>gi|148242144|ref|YP_001227301.1| endonuclease III [Synechococcus sp. RCC307]
gi|147850454|emb|CAK27948.1| Endonuclease III [Synechococcus sp. RCC307]
Length = 217
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 111/202 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E I + ++P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MKKQERVETIIRRLNEQYPETPIPLDHSDAFTLLIAVLLSAQCTDKKVNEVTPALFAAGP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M A+ E ++ IR +G+ + K++N+ L+ +L+ ++P + E L LPG+G
Sbjct: 61 NPAAMAALSEAEILGLIRQLGLAKTKAKNVKRLAELLLERHGGEVPGSFEALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R++ R GL+ G + + E L R+ P +H H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSNGDSVAQTEADLKRLFPKEHWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ GR C AR + C +
Sbjct: 181 IFWGREFCTARGCDGRVCSMCT 202
>gi|167766158|ref|ZP_02438211.1| hypothetical protein CLOSS21_00652 [Clostridium sp. SS2/1]
gi|167712238|gb|EDS22817.1| hypothetical protein CLOSS21_00652 [Clostridium sp. SS2/1]
gi|291560097|emb|CBL38897.1| Predicted EndoIII-related endonuclease [butyrate-producing
bacterium SSC/2]
Length = 210
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN K LFE
Sbjct: 1 MNKKELALEVIERLKNEYPDADCTLEYDQAWKLLVSVRLAAQCTDARVNVVVKGLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + A ++ +R G+ + K+ +I +L +E++ KIP + + LPG+GR
Sbjct: 61 TVEALAAADVADIEEIVRPCGLGKSKARDISKCMKVLRDEYNGKIPTDFKSILSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L I+PP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIKDPKKVEMALWEIVPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C+ C ++++C
Sbjct: 181 LVWHGRDVCTARTKPHCERCCLNDIC 206
>gi|221231967|ref|YP_002511119.1| endonuclease III [Streptococcus pneumoniae ATCC 700669]
gi|220674427|emb|CAR68979.1| putative endonuclease III [Streptococcus pneumoniae ATCC 700669]
Length = 201
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|167769432|ref|ZP_02441485.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM
17241]
gi|167668400|gb|EDS12530.1| hypothetical protein ANACOL_00762 [Anaerotruncus colihominis DSM
17241]
Length = 214
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/208 (35%), Positives = 116/208 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E L +P L Y L++A L+AQ TD VN LF+
Sbjct: 1 MTKKQAAHEAVRLLKEAYPDAICSLEYRKPHELMIATRLAAQCTDARVNIVCVDLFDKYR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ++ I++ G+Y+ K+ +II++ +L+ +++ ++P T+E LT+LPGIGR
Sbjct: 61 SVRDFAEANLTDVEEIIKSCGLYKTKAHDIIAMCQMLMEKYNGELPDTVEELTKLPGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+++ F P I DTH RI+N +GL GK P KVE L ++PP+ + + L
Sbjct: 121 KTANLVVGDVFHKPAIVCDTHCIRITNLLGLTEGKDPVKVENQLRPLLPPEESNDFCHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
VLHGR VC AR+PQC +C++ CK K
Sbjct: 181 VLHGRAVCVARRPQCDACVLKVCCKHYK 208
>gi|160945074|ref|ZP_02092300.1| hypothetical protein FAEPRAM212_02593 [Faecalibacterium prausnitzii
M21/2]
gi|158442805|gb|EDP19810.1| hypothetical protein FAEPRAM212_02593 [Faecalibacterium prausnitzii
M21/2]
Length = 229
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 118/220 (53%), Gaps = 1/220 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ +P E+ ++P L Y + + L+V+V L+AQ TD VN
Sbjct: 2 PVRKKAPEDLTAKKALALEVIRRLKAEYPDAGCTLDYDHAWQLLVSVRLAAQCTDARVNI 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ LF + + A + ++ ++ G+ K+ +I + +L +++D ++P T +
Sbjct: 62 VVEELFAKYPSVAALAAAEPEDIEAIVKPCGLGHSKARDISACMRMLRDKYDCRVPDTFD 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP 187
L LPG+GRK AN+I+ FG P I DTH R+ N+IGL G P KVE +L +IIP
Sbjct: 122 ELLALPGVGRKSANLIMGDVFGKPAIVTDTHCIRLCNKIGLVGGIKEPQKVEMALWKIIP 181
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + + V+HGR VC ARKP+C+ C + ++C+ ++
Sbjct: 182 PEEGSDLCHRFVMHGRAVCNARKPECEKCCLKDICRTARE 221
>gi|218888021|ref|YP_002437342.1| endonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758975|gb|ACL09874.1| endonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 281
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + L L++P+ + L N + L+VA +L+AQ TDV VN+ T LF
Sbjct: 1 MQTADRAARVLELLRLRYPTRETHLVAQNAWELLVATVLAAQCTDVRVNQVTPGLFSRWP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P ++ +++L+ I + G YR K+ N++ + + + ++P+T+ L +LPG+ R
Sbjct: 61 GPAELARATQEELEEVIHSTGFYRNKATNLLGAARRVTDVHGGEVPRTMAELVQLPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L A+GI I VDTH+ RI+ R+G P ++E+ L+ + P + ++
Sbjct: 121 KTANVVLWGAYGINEGIAVDTHVKRIAFRMGFTESVDPVQIERDLMDLFPRDAWGDVNHM 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LV GR+VC AR P+C C + +C R
Sbjct: 181 LVWFGRHVCDARAPRCGECEMIEVCPR 207
>gi|317471045|ref|ZP_07930420.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
gi|316901486|gb|EFV23425.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
Length = 216
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + T + + +I + + + K L + N + L++A +LSAQ TD VN T+
Sbjct: 2 AKVSKRVTKERVRKICDILNETYTTEYKCYLNHENAWQLLIATMLSAQCTDARVNIVTEK 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF+ + + ++L+ I + G Y+ K++NII + +I ++P+++E LT
Sbjct: 62 LFKKYMSLEAFARADIRELERDIYSTGFYKNKAKNIIGAAGQIIERHGGEVPESIEELTA 121
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK ANVI F P+I VDTH+ RIS ++ L P K+E L++++P +
Sbjct: 122 LDGVGRKTANVIRGNIFHEPSIVVDTHVKRISKKLYLTKNDDPVKIEHDLMKVLPKEQWI 181
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ HGR VC AR+P+C C + ++C
Sbjct: 182 LYNIQIITHGRNVCIARRPKCGECTLQSVCPS 213
>gi|293569819|ref|ZP_06680906.1| endonuclease III [Enterococcus faecium E1071]
gi|291587567|gb|EFF19444.1| endonuclease III [Enterococcus faecium E1071]
Length = 225
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKQKTMEALETMYGMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P + E L LPG+GR
Sbjct: 61 TPDALAEASIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTSREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + T +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDATVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTARNPKCEVCPLLSICQDGK 209
>gi|326772555|ref|ZP_08231839.1| endonuclease III [Actinomyces viscosus C505]
gi|326637187|gb|EGE38089.1| endonuclease III [Actinomyces viscosus C505]
Length = 279
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T + + +P L + F L+VA +LSAQ+TD VN T LFE P
Sbjct: 71 TARRAGAVDDELMTLYPDAACALDHDGPFQLLVATVLSAQTTDARVNTVTPELFERYPDP 130
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + L+ +R +G R K+ +++ + L F+ ++P + E L LPG+GRK
Sbjct: 131 AALGAARREDLEAILRPLGFQRAKAGHLLGIGQALTERFEGRVPCSREELVALPGVGRKT 190
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L AFG P I VDTH+ R+S R+G K P +VE+ + + P + + L+
Sbjct: 191 ANVVLGNAFGRPAITVDTHVGRLSRRLGWTTSKDPLRVEKDIAALWEPWRWTDGCHRLIE 250
Query: 201 HGRYVCKARKPQCQSCII--SNLCK 223
HGR VC AR P+C C + + LC
Sbjct: 251 HGRQVCSARSPRCGQCTLLEAGLCP 275
>gi|257878198|ref|ZP_05657851.1| endonuclease III [Enterococcus faecium 1,230,933]
gi|257881020|ref|ZP_05660673.1| endonuclease III [Enterococcus faecium 1,231,502]
gi|257884680|ref|ZP_05664333.1| endonuclease III [Enterococcus faecium 1,231,501]
gi|257889604|ref|ZP_05669257.1| endonuclease III [Enterococcus faecium 1,231,410]
gi|257892456|ref|ZP_05672109.1| endonuclease III [Enterococcus faecium 1,231,408]
gi|260559243|ref|ZP_05831429.1| endonuclease III/Nth [Enterococcus faecium C68]
gi|261207777|ref|ZP_05922462.1| endonuclease III/Nth [Enterococcus faecium TC 6]
gi|289565851|ref|ZP_06446293.1| endonuclease III [Enterococcus faecium D344SRF]
gi|293553461|ref|ZP_06674089.1| endonuclease III [Enterococcus faecium E1039]
gi|293559319|ref|ZP_06675861.1| endonuclease III [Enterococcus faecium E1162]
gi|294614033|ref|ZP_06693962.1| endonuclease III [Enterococcus faecium E1636]
gi|294619868|ref|ZP_06699250.1| endonuclease III [Enterococcus faecium E1679]
gi|294622656|ref|ZP_06701619.1| endonuclease III [Enterococcus faecium U0317]
gi|314939768|ref|ZP_07846990.1| endonuclease III [Enterococcus faecium TX0133a04]
gi|314942100|ref|ZP_07848956.1| endonuclease III [Enterococcus faecium TX0133C]
gi|314948275|ref|ZP_07851667.1| endonuclease III [Enterococcus faecium TX0082]
gi|314952363|ref|ZP_07855370.1| endonuclease III [Enterococcus faecium TX0133A]
gi|314992018|ref|ZP_07857471.1| endonuclease III [Enterococcus faecium TX0133B]
gi|314995685|ref|ZP_07860775.1| endonuclease III [Enterococcus faecium TX0133a01]
gi|257812426|gb|EEV41184.1| endonuclease III [Enterococcus faecium 1,230,933]
gi|257816678|gb|EEV44006.1| endonuclease III [Enterococcus faecium 1,231,502]
gi|257820518|gb|EEV47666.1| endonuclease III [Enterococcus faecium 1,231,501]
gi|257825964|gb|EEV52590.1| endonuclease III [Enterococcus faecium 1,231,410]
gi|257828835|gb|EEV55442.1| endonuclease III [Enterococcus faecium 1,231,408]
gi|260075000|gb|EEW63316.1| endonuclease III/Nth [Enterococcus faecium C68]
gi|260078160|gb|EEW65866.1| endonuclease III/Nth [Enterococcus faecium TC 6]
gi|289162394|gb|EFD10252.1| endonuclease III [Enterococcus faecium D344SRF]
gi|291593079|gb|EFF24659.1| endonuclease III [Enterococcus faecium E1636]
gi|291593897|gb|EFF25389.1| endonuclease III [Enterococcus faecium E1679]
gi|291597886|gb|EFF29015.1| endonuclease III [Enterococcus faecium U0317]
gi|291602338|gb|EFF32562.1| endonuclease III [Enterococcus faecium E1039]
gi|291606683|gb|EFF36075.1| endonuclease III [Enterococcus faecium E1162]
gi|313590076|gb|EFR68921.1| endonuclease III [Enterococcus faecium TX0133a01]
gi|313593453|gb|EFR72298.1| endonuclease III [Enterococcus faecium TX0133B]
gi|313595480|gb|EFR74325.1| endonuclease III [Enterococcus faecium TX0133A]
gi|313599110|gb|EFR77955.1| endonuclease III [Enterococcus faecium TX0133C]
gi|313640997|gb|EFS05577.1| endonuclease III [Enterococcus faecium TX0133a04]
gi|313645256|gb|EFS09836.1| endonuclease III [Enterococcus faecium TX0082]
Length = 225
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKQKTMEALETMYGMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P + E L LPG+GR
Sbjct: 61 TPDALAEASIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTSREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + T +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDATVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTARNPKCEVCPLLSICQDGK 209
>gi|154150304|ref|YP_001403922.1| endonuclease III [Candidatus Methanoregula boonei 6A8]
gi|153998856|gb|ABS55279.1| endonuclease III [Methanoregula boonei 6A8]
Length = 220
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPK---GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ ++I+ ++P + + F +++ +LSAQ+TD V + + LF
Sbjct: 1 MDAQDAKKIYSALLKRYPRARESPTTICRGTPFEVLILTILSAQTTDKAVLQVKEPLFSA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+P + ++ I ++G Y K+++I++ + + NEF ++P+T++ L +PG+
Sbjct: 61 YPSPHALARANPADVEPIIHSLGYYHAKAKHIVAAAASVENEFGGEVPRTMDELLSIPGV 120
Query: 137 GRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
GRK AN++L FG I VDTH+ R++ RIG++ +EQ L+ + P K +
Sbjct: 121 GRKTANIVLYHGFGQNHGIAVDTHVRRLAQRIGISDTDDVKVIEQDLMALYPKKDWGDLT 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ HGR C ARKP C C+I C+ +
Sbjct: 181 DVFIAHGRATCDARKPLCGDCVIRKYCRYYR 211
>gi|261338652|ref|ZP_05966536.1| endonuclease III [Bifidobacterium gallicum DSM 20093]
gi|270276374|gb|EFA22228.1| endonuclease III [Bifidobacterium gallicum DSM 20093]
Length = 220
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + L + P PK L + F L++A +LSAQ TD VN+ T LFE T +
Sbjct: 11 ERMHSEYALLCDEIPYPKCALNFSTPFELLIATVLSAQCTDKRVNETTPVLFEAYPTAHE 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + +++ I +G +R K+++II+LS +++EFD ++P T+E L LPG+GRK AN
Sbjct: 71 LAAANPQDVEDIIHPLGFFRAKTKHIIALSQAIVHEFDGEVPGTMEQLVTLPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYW 197
V+L AF +P VDTH+ R++ R+ P +EQ + PP + +
Sbjct: 131 VVLGNAFHVPGFPVDTHVIRVTARLHWRASWNDPKAKPELIEQEITACFPPSEWTDLSHR 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+LHGR VCKAR+P C+ C ++ C
Sbjct: 191 LILHGRNVCKARRPLCEQCPLNLTCPS 217
>gi|291455992|ref|ZP_06595382.1| endonuclease III [Bifidobacterium breve DSM 20213]
gi|291382401|gb|EFE89919.1| endonuclease III [Bifidobacterium breve DSM 20213]
Length = 222
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 5/207 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + + + P P+ L++ + L++A +LSAQ+TD VN T LF T
Sbjct: 10 ERMHKEYDILCRMIPQPQCALHFTSPLQLLIATVLSAQTTDKRVNTVTPELFATYPTAHD 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++++ I +G YR K++++I L+ L FD ++PQ+++ LT LPG+GRK AN
Sbjct: 70 LAEANPAQVEDIIHPLGFYRSKTQHLIGLATALDERFDGQVPQSMDELTSLPGVGRKTAN 129
Query: 143 VILSMAFGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
V+L AFGIP VDTH+ R+ + P K+E+ + PP+ + +
Sbjct: 130 VVLGNAFGIPGFPVDTHVMRVTGRLRWRSDWRSTHLDPVKIEREITACFPPEEWTDLSHR 189
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+L GR C AR P C +C ++ C
Sbjct: 190 LILFGRSTCHARTPDCANCPLAATCPS 216
>gi|163782108|ref|ZP_02177107.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159882640|gb|EDP76145.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 209
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 115/205 (56%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E+ +P + EL Y N F L++ +L+AQ +D VN LF +P+
Sbjct: 2 RERALEVIERLEKLYPDARLELEYDNAFELLIEAILAAQESDKKVNTLRAELFSKYKSPE 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ + ++L+ I +I YR+K++ + L+ EF +IP+++E + +LPG+GRK A
Sbjct: 62 DIVRVPLEELEKDISSINFYRRKAKLLKKCCEALVKEFGGEIPKSVEEMVKLPGVGRKTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
N++L AF +P I VD H+ R++ RIG K +K EQ L+ I+P + + L+ H
Sbjct: 122 NMVLGGAFNLPAIIVDRHVLRVAQRIGFTDKKDADKAEQDLMDIVPEELWTKFSFLLLNH 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G+ +C A+ P+C+ C I LC K
Sbjct: 182 GKNLCTAKNPKCEECPICELCDSCK 206
>gi|162453022|ref|YP_001615389.1| putative endonuclease III [Sorangium cellulosum 'So ce 56']
gi|161163604|emb|CAN94909.1| putative endonuclease III [Sorangium cellulosum 'So ce 56']
Length = 213
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 116/210 (55%), Gaps = 1/210 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + + ++P + EL + L+VA +L+AQ TD VN+ T LF
Sbjct: 1 MTPMNARDRIPLLLEQLREEYPDARYELDWKTPLDLLVATILAAQCTDERVNRVTATLFP 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q +L+ ++ G YR+K++ + + L+ F ++P T+ LT LPG
Sbjct: 61 KYPTAQAYADAPTAELEEELKPTGFYRQKTKTVQATCRELVARFGGEVPATMAELTTLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ RK ANV+L+ AF IP+ I VDTH+ R+S RIGL+ + P ++E+ L++I+P
Sbjct: 121 VARKTANVVLNTAFDIPSGIIVDTHVARLSGRIGLSKREKPEQIEEDLMKIVPKDQWTFF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
LVLHGRY C ARKP+C C +S C +
Sbjct: 181 GPALVLHGRYTCVARKPKCGECRMSEFCPK 210
>gi|315452516|ref|YP_004072786.1| endonuclease III [Helicobacter felis ATCC 49179]
gi|315131568|emb|CBY82196.1| endonuclease III [Helicobacter felis ATCC 49179]
Length = 214
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 1/201 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + I + +P EL+Y N + L+VAV+LSAQ TD VN T LF +
Sbjct: 2 KTKAQHIKARLVEHFGNPSTELHYDNTYQLLVAVILSAQCTDARVNATTPALFALYPNVD 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ L+ I++I K++++I ++ + + F IP T L LPG+G+K A
Sbjct: 62 SLARADLTTLKECIKSISYPNNKAKHLIKMAQEVCSRFKGVIPSTQAELKSLPGVGQKSA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NV+LS+ FG + VDTH+FR+++R+GL+ KTP + E+ L + H+ L+L
Sbjct: 122 NVVLSVCFGQNYLAVDTHVFRVAHRLGLSQAKTPLQTEKDLSALF-ESDLAQLHHALILF 180
Query: 202 GRYVCKARKPQCQSCIISNLC 222
GRY CKA KP C++C + +LC
Sbjct: 181 GRYTCKALKPLCENCFLGDLC 201
>gi|294498166|ref|YP_003561866.1| endonuclease III [Bacillus megaterium QM B1551]
gi|294348103|gb|ADE68432.1| endonuclease III [Bacillus megaterium QM B1551]
Length = 223
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 132/206 (64%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ + + +P EL + N F L++AV LSAQ TD VN+ T LF+
Sbjct: 1 MLTLKQIRQCLDAMAEMFPDAHCELNHRNPFDLVIAVALSAQCTDALVNRVTADLFKKYQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI L +LI+E+ ++P + LT LPG+GR
Sbjct: 61 TPEDYLAVSLEELQQDIRSIGLYRNKAKNIQKLCRMLIDEYGGEVPTDRDELTNLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P+I VDTH+ R+S R+G+ + +VE++L+R +P H+
Sbjct: 121 KTANVVVSVAFGVPSIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKVPKDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
L+ GRY CKA+ PQC C + +LC+
Sbjct: 181 LIFFGRYHCKAQSPQCHVCPLLDLCR 206
>gi|295703517|ref|YP_003596592.1| endonuclease III [Bacillus megaterium DSM 319]
gi|294801176|gb|ADF38242.1| endonuclease III [Bacillus megaterium DSM 319]
Length = 223
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 132/206 (64%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ + + +P EL + N F L++AV LSAQ TD VN+ T LF+
Sbjct: 1 MLTLKQIRQCLDAMAEMFPDAHCELNHRNPFDLVIAVALSAQCTDALVNRVTADLFKKYQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI L +LI+E+ ++P + LT LPG+GR
Sbjct: 61 TPEDYLAVSLEELQQDIRSIGLYRNKAKNIQKLCRMLIDEYGGEVPTDRDELTNLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P+I VDTH+ R+S R+G+ + +VE++L+R IP H+
Sbjct: 121 KTANVVVSVAFGVPSIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKIPKDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
L+ GRY CKA+ PQC C + +LC+
Sbjct: 181 LIFFGRYHCKAQSPQCHVCPLLDLCR 206
>gi|299140539|ref|ZP_07033677.1| endonuclease III [Prevotella oris C735]
gi|298577505|gb|EFI49373.1| endonuclease III [Prevotella oris C735]
Length = 229
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 122/207 (58%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F + EL + + F LIVA LLSAQ TD +N T L+
Sbjct: 1 MTRKERFKYILDYFRKEQGPVTTELEFGSAFQLIVATLLSAQCTDKRINMITPELYRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M + + I+++ K+ ++ ++ IL+ F+ ++P + LT+LPG+GR
Sbjct: 61 TAEAMAQADWEDIFQLIKSVSYPNSKAHHLSEMAKILVERFNGEVPDNTDDLTQLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP NAH+
Sbjct: 121 KTANVVQAVWFGKPTLAVDTHVYRVSHRLGLVPETANTPLKVELELMKYIPKADVGNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRY+CK+++PQCQ C S C
Sbjct: 181 WLLLHGRYICKSQRPQCQDCPFSTFCP 207
>gi|289168078|ref|YP_003446347.1| endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site)
lyase [Streptococcus mitis B6]
gi|288907645|emb|CBJ22482.1| endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site)
lyase [Streptococcus mitis B6]
Length = 209
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFATFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++P+T E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPRTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|55377588|ref|YP_135438.1| endonuclease III [Haloarcula marismortui ATCC 43049]
gi|55230313|gb|AAV45732.1| endonuclease III [Haloarcula marismortui ATCC 43049]
Length = 227
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ E+ ++P L Y + L++AV+LSAQ TD VN+ T LFE
Sbjct: 8 REEQATEVVDRLHEEYPDSTISLNYSSRLELLIAVVLSAQCTDERVNEVTADLFEKYQGA 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A E++L I I + K + + IL E D ++P T+ LT LPG+GRK
Sbjct: 68 EDYAAASEEQLAEDIYGITFHNNKGGYLQGIGEILTEEHDGEVPDTMSALTDLPGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L I I VDTH+ R+S R+ L + P +EQ LL ++P + L+
Sbjct: 128 ANVVLQHGHDIVEGIVVDTHVQRLSRRLELTEEERPEAIEQDLLDVVPESEWQQFTHLLI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VC AR C++C+++++C K
Sbjct: 188 DHGRAVCGARSADCEACVLADICPSEK 214
>gi|15616739|ref|NP_239951.1| endonuclease III [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219681494|ref|YP_002467879.1| endonuclease III [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|219682050|ref|YP_002468434.1| endonuclease III [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|257471175|ref|ZP_05635174.1| endonuclease III [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|11386793|sp|P57219|END3_BUCAI RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|25292130|pir||E84943 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) [imported]
- Buchnera sp. (strain APS)
gi|10038802|dbj|BAB12837.1| endonuclease III [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219621783|gb|ACL29939.1| endonuclease III [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|219624337|gb|ACL30492.1| endonuclease III [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|311086433|gb|ADP66514.1| endonuclease III [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
gi|311087016|gb|ADP67096.1| endonuclease III [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
gi|311087585|gb|ADP67664.1| endonuclease III [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
Length = 210
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 91/208 (43%), Positives = 137/208 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ EI + S P PK EL++ + F L+++V+LSAQSTD VNK TK LF+IA+T
Sbjct: 1 MNKKKRYEILSILSRNNPEPKIELFFSSDFELLLSVILSAQSTDFIVNKTTKILFKIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + +G ++L+NYI+ IG+Y K+ NII S I++ ++++ +P L LPG+GRK
Sbjct: 61 PETIFLLGLERLKNYIKDIGLYNTKALNIIRTSFIILTKYNSIVPNNRIELESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+IL++ F TI VDTH+FR+ NR A GK VE+ L++++P + N H W +
Sbjct: 121 TANIILNILFKKKTIAVDTHVFRVCNRTNFAKGKNVKIVEEKLIKVVPSIFKLNFHSWFI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRY+C ARK +C C+I LC+ ++
Sbjct: 181 LHGRYICTARKIKCNICLIFKLCEFKQK 208
>gi|313637221|gb|EFS02735.1| endonuclease III [Listeria seeligeri FSL S4-171]
Length = 232
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 1/213 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 11 VTKLLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
P+ LA+ +L + IR+IG+YR K++NI LS L+ EF+ ++PQT L LPG
Sbjct: 71 KYHRPEDYLAVSLDELMDDIRSIGLYRNKAKNIQGLSQKLLTEFNGEVPQTHAELESLPG 130
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +A
Sbjct: 131 VGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELWSDA 190
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H++++ GRY CKAR P C +C + LC+ K+
Sbjct: 191 HHYMIFFGRYHCKARNPDCPTCPLLYLCREGKK 223
>gi|294495039|ref|YP_003541532.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanohalophilus mahii DSM 5219]
gi|292666038|gb|ADE35887.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanohalophilus mahii DSM 5219]
Length = 212
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 118/199 (59%), Gaps = 1/199 (0%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+I+ L ++P P+ L++ L+VA +LSAQSTDV +NK T+ LF +
Sbjct: 11 QIWGLLKKEYPDPQPALHFKTPLQLLVATILSAQSTDVQINKVTRELFRKYRSVFDYADA 70
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+L+ I + G YR K++++ + ++I +FD ++P T+E L +LPG+ RK AN++L+
Sbjct: 71 DISELEKDIYSTGFYRNKAKHLQQSARVIIEDFDGEVPSTMEDLLKLPGVARKTANIVLA 130
Query: 147 MAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
FG I VDTH+ R++ R+G K P K+E+ L+ ++ + L+LHGR +
Sbjct: 131 RGFGVKAGIAVDTHVKRLATRLGFTVNKDPVKIERDLMELVDRNEWDDFSLTLILHGRNI 190
Query: 206 CKARKPQCQSCIISNLCKR 224
C ARKP C C++++LC
Sbjct: 191 CFARKPACGKCVVNHLCPS 209
>gi|329945578|ref|ZP_08293314.1| endonuclease III [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528709|gb|EGF55665.1| endonuclease III [Actinomyces sp. oral taxon 170 str. F0386]
Length = 263
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 2/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +P L + F L++A +LSAQ+TD VN T LF +
Sbjct: 58 RAGAVDDELIALYPDAACALDHDGPFQLLIATVLSAQTTDARVNTVTPELFGRYPDAAAL 117
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + L+ +R +G R K+ +++ + L F+ ++P + E L LPG+GRK ANV
Sbjct: 118 GAARREDLEAILRPLGFQRAKAGHLLGIGQALTERFEGRVPCSREELVSLPGVGRKTANV 177
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L AFG P I VDTH+ R+S R+G K P +VE+ + + P + + L+ HGR
Sbjct: 178 VLGNAFGKPAITVDTHVGRLSRRLGWTTSKDPLRVEKDIAALWEPWRWTDGCHRLIEHGR 237
Query: 204 YVCKARKPQCQSCII--SNLCK 223
VC AR P+C C + + LC
Sbjct: 238 RVCSARSPRCGECALLEAGLCP 259
>gi|323144835|ref|ZP_08079404.1| endonuclease III [Succinatimonas hippei YIT 12066]
gi|322415360|gb|EFY06125.1| endonuclease III [Succinatimonas hippei YIT 12066]
Length = 238
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 140/211 (66%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
L + + + + P+P+ EL Y N F L+ AV+LSAQ+TD +VNKAT LF
Sbjct: 23 KKSSLLSKAIRYSLMSVLREQNPNPQSELKYNNPFELLCAVVLSAQATDASVNKATPALF 82
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++A TP+ M +G + + YI+TIG++R K++N+ LS IL ++++++P T E L +LP
Sbjct: 83 KVAPTPELMCKLGAEGIAPYIKTIGLWRNKAKNLQILSQILYEKYNSQVPDTYEELIKLP 142
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+G K A V+L++AF P I VDTHIFR+ NR GL GKT +VE +L +I + +A
Sbjct: 143 GVGSKTAKVVLNVAFKKPYIAVDTHIFRVCNRTGLCVGKTVKEVEDNLPALIDKEFIQDA 202
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H++++LHGRYVCKA++PQC SC+I CK
Sbjct: 203 HHYILLHGRYVCKAQRPQCSSCVIREYCKSY 233
>gi|291543935|emb|CBL17044.1| endonuclease III [Ruminococcus sp. 18P13]
Length = 219
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 107/199 (53%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +P L+Y + L++A LSAQ TD VN T+ LFE T +
Sbjct: 7 ARAVCDRLEQVYPDAVCALHYQKPYELMIAARLSAQCTDARVNIVTRTLFEKYPTLESFA 66
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+L+ IR G Y K+++II + ++ + ++P T+E L LPGIGRK AN++
Sbjct: 67 NAELTELEQDIRPCGFYHTKAQSIIGMCRRILEVYGGELPHTMEDLLTLPGIGRKTANLL 126
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
+ +G P + DTH RI R+GL K P KVE L +++ P+ + + +VL GR
Sbjct: 127 MGDVYGKPAVVTDTHCIRICGRLGLTRHKEPAKVEADLWKVLEPERASDFCHRIVLFGRE 186
Query: 205 VCKARKPQCQSCIISNLCK 223
+C+AR P+C+ C + +LC
Sbjct: 187 ICRARHPRCEGCPLQDLCP 205
>gi|157413232|ref|YP_001484098.1| putative endonuclease [Prochlorococcus marinus str. MIT 9215]
gi|157387807|gb|ABV50512.1| putative endonuclease [Prochlorococcus marinus str. MIT 9215]
Length = 217
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 117/201 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N +TL+VAV+LSAQSTD VN+ TK+LF +AD
Sbjct: 1 MRKSERAEIIRKELKNLYPSPPIPLDHTNAYTLLVAVVLSAQSTDKKVNELTKNLFRVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+KM+ +G + YI+ +G+ +KS+NI +LS ILI + +P + E L LPG+G
Sbjct: 61 NPEKMVKLGINGIYEYIKFLGLSNQKSKNIYNLSKILIEKHKGIVPNSFEKLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+VI+S F IP+ VDTHI R+S R GL+ G + + E+ L +I P H +
Sbjct: 121 KTASVIMSQVFKIPSFPVDTHIHRLSQRWGLSNGDSVVQTEKDLKKIFPVNEWNTLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTKCYLC 201
>gi|319651307|ref|ZP_08005437.1| endonuclease III [Bacillus sp. 2_A_57_CT2]
gi|317397087|gb|EFV77795.1| endonuclease III [Bacillus sp. 2_A_57_CT2]
Length = 218
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDAMGEMFPEAHCELNHSNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ L + ++LQ IR+IG+YR K++NI L +L++E++ +P+ + LT+LPG+GR
Sbjct: 61 TPQDYLNVSIEELQEDIRSIGLYRNKAKNIQKLCRLLLDEYEGVVPRDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+A+G+P I VDTH+ R+S R+G + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAYGVPAIAVDTHVERVSKRLGFCRWKDSVLEVEKTLMKKVPMDEWSITHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC+ C + +LC+ K+
Sbjct: 181 MIFFGRYHCKAQNPQCEICPLLDLCREGKK 210
>gi|148543434|ref|YP_001270804.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Lactobacillus reuteri DSM 20016]
gi|184152842|ref|YP_001841183.1| endonuclease III [Lactobacillus reuteri JCM 1112]
gi|227363583|ref|ZP_03847700.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Lactobacillus reuteri MM2-3]
gi|325681777|ref|ZP_08161296.1| endonuclease III [Lactobacillus reuteri MM4-1A]
gi|148530468|gb|ABQ82467.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus reuteri
DSM 20016]
gi|183224186|dbj|BAG24703.1| endonuclease III [Lactobacillus reuteri JCM 1112]
gi|227071379|gb|EEI09685.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Lactobacillus reuteri MM2-3]
gi|324978868|gb|EGC15816.1| endonuclease III [Lactobacillus reuteri MM4-1A]
Length = 213
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 123/205 (60%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +P E+ + +P L ++ ++A +LSAQSTD +VN+ T LF
Sbjct: 1 MLSPDEIRYSIKVMRQTFPEAGTTLIADTNYHFLLATILSAQSTDQSVNEVTPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + + +++ YI+ +G+YR K++ ++ S ++ +F+ ++P TL+ L L G+GR
Sbjct: 61 LPADLAGVEPAEVEPYIKRLGLYRNKAKFLVKTSQQIVTDFNGEVPHTLKELITLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ F IP VDTH+ R++ R+ + K + +E+ L++ IPP+H +AH+
Sbjct: 121 KVADVVLAECFNIPAFPVDTHVSRVARRLRMVEPKASVLAIEKKLMKTIPPEHWLDAHHS 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ GRYVC AR P+CQ+C + +LC
Sbjct: 181 MIFWGRYVCTARNPKCQTCPLLSLC 205
>gi|301167808|emb|CBW27392.1| putative endonuclease [Bacteriovorax marinus SJ]
Length = 218
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ I +P L +VN FTL++AVLLSAQ TD VNK T LFE A P
Sbjct: 4 KKERAAYIDERLEELFPETPVPLDHVNPFTLLIAVLLSAQCTDERVNKVTPALFEKATCP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M+ + +++ ++ G+ +K++ I LS ILI + ++P E L LPG+G K
Sbjct: 64 EDMVKLTVDEIEAIVKPCGLAPRKAKAIHRLSEILIEKHGGEVPDNFEDLEELPGVGHKT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L+ +FGIP VDTHI R++ + GL GK + E+ L R P H ++
Sbjct: 124 AGVVLAQSFGIPAFPVDTHIHRLAQQWGLTSGKNVVETEKDLKRCFPKDRWNKLHLQIIF 183
Query: 201 HGRYVCKARKPQCQSCIISNLC-------KRIKQ 227
GR C AR+ C + C ++ K+
Sbjct: 184 FGRKYCAARQCDGLQCELCQTCFPDRKRARKYKK 217
>gi|300933715|ref|ZP_07148971.1| endonuclease III [Corynebacterium resistens DSM 45100]
Length = 225
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 105/194 (54%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N L++A +LSAQ TDV VN T LF + Q +L
Sbjct: 2 LAEAYPDAHAELDFSNPLELLIATVLSAQCTDVRVNIVTPALFSRFLSAQAYAEADRDEL 61
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ IR G YR K+ +I+ L+ ++ D ++P LE L LPG+GRK ANV+L AFG+
Sbjct: 62 EQMIRPTGFYRSKANSILGLARAIVENHDGEVPNNLEDLVALPGVGRKTANVVLGNAFGV 121
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH+ R++ R L + P VE+ L+ +I K + + HGR VC +R+
Sbjct: 122 PGITVDTHLGRLARRWKLTEHEDPVHVERDLMELIERKEWTQFSHRTIFHGRRVCHSRRA 181
Query: 212 QCQSCIISNLCKRI 225
C +C+++ C
Sbjct: 182 ACGACLLAKQCPSF 195
>gi|89099879|ref|ZP_01172751.1| endonuclease III [Bacillus sp. NRRL B-14911]
gi|89085437|gb|EAR64566.1| endonuclease III [Bacillus sp. NRRL B-14911]
Length = 215
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL++ N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRHCLDVMGEMFPDAHCELHHENPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ +LQN IR+IG++R K++NI L +LI+E++ +P + LT+LPG+GR
Sbjct: 61 TPEDYLAVSLDELQNDIRSIGLFRNKAKNIHKLCRLLIDEYNGIVPHDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+A+ +P I VDTH+ R+S R+G + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAYDVPAIAVDTHVERVSKRLGFCRWKDSVLEVEKTLMKKVPEEEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA+ PQC+ C + +LC+ ++
Sbjct: 181 MIFFGRYHCKAQNPQCEICPLLDLCREGRK 210
>gi|69249465|ref|ZP_00604988.1| Endonuclease III/Nth [Enterococcus faecium DO]
gi|68194149|gb|EAN08683.1| Endonuclease III/Nth [Enterococcus faecium DO]
Length = 225
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLRKQKTMEALETMYGMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P + E L LPG+GR
Sbjct: 61 TPDALAEASIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTSREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + T +VE++L+R +P + H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDATVMEVEETLMRKVPQELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + ++C+ K
Sbjct: 181 LIFFGRYHCTARNPKCEVCPLLSICQDGK 209
>gi|295105670|emb|CBL03214.1| Predicted EndoIII-related endonuclease [Faecalibacterium
prausnitzii SL3/3]
Length = 229
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 1/220 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ +P E+ ++P L Y + + L+V+V L+AQ TD VN
Sbjct: 2 PVRKKAPEDLTAKKALALEVIRRLKAEYPDAGCTLDYDHAWQLLVSVRLAAQCTDARVNI 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ LF + + A + ++ ++ G+ K+ +I + +L +++D ++P T E
Sbjct: 62 VVEELFAKYPSVAALAAAEPEDIEAIVKPCGLGHSKARDISACMRMLRDKYDCRVPNTFE 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP 187
L LPG+GRK AN+I+ FG P I DTH R+ N+IGL G P KVE +L +IIP
Sbjct: 122 ELLALPGVGRKSANLIMGDVFGKPAIVTDTHCIRLCNKIGLVDGIKEPQKVEMALWKIIP 181
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + + V+HGR VC ARKP+C+ C + ++C+ ++
Sbjct: 182 PEEGSDLCHRFVMHGRAVCNARKPECEKCCLKDICRTARE 221
>gi|147678561|ref|YP_001212776.1| EndoIII-related endonuclease [Pelotomaculum thermopropionicum SI]
gi|146274658|dbj|BAF60407.1| predicted EndoIII-related endonuclease [Pelotomaculum
thermopropionicum SI]
Length = 230
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 118/202 (58%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ I + + K+P L + F L+VA +LSAQ TD VN+ T LF+ +TP
Sbjct: 22 KEEAAARIMEILAEKYPEAGTALNFRTPFELLVAAILSAQCTDRQVNRITAGLFKKYNTP 81
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q+ A+ ++L I+ G++R KS +II S L+ +PQ + L LPG+GRK
Sbjct: 82 QEFAALSPEELAGEIKGCGLHRVKSRHIIEASRELVKRHGGLVPQDRKALEALPGVGRKT 141
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A V+L +AFG + VDTH++R++ R+GL+ K P +VE+ L +IPP + AH+ L+
Sbjct: 142 AGVVLGVAFGGCELPVDTHVYRVARRLGLSEAKRPEEVEEELAGLIPPPQRMAAHHRLIA 201
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
HGR VC ARKP C C + + C
Sbjct: 202 HGRQVCSARKPACHRCCVKDFC 223
>gi|258645531|ref|ZP_05733000.1| endonuclease III [Dialister invisus DSM 15470]
gi|260402887|gb|EEW96434.1| endonuclease III [Dialister invisus DSM 15470]
Length = 219
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 86/198 (43%), Positives = 134/198 (67%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
E + + + L Y + FTL+VAV+LSAQ TD VN T +F TP+KM A+
Sbjct: 10 EQLRRLADVYKNEGTMLTYGSSFTLLVAVILSAQCTDKRVNIITNRIFPRLGTPEKMGAL 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +L+ I G+YR K++N++ + H+LI+ + K+P+ + L +LPG+GRK ANV+ S
Sbjct: 70 SQTELEKEIHDCGLYRAKAKNLLGMCHMLISRYGGKVPEDFDELVKLPGVGRKTANVVRS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG P I VDTH+FR+SNR+ L+ G TP++VE+ L ++IP ++ NAH+WL+ HGR VC
Sbjct: 130 VAFGYPAIAVDTHVFRVSNRLKLSVGDTPDQVEEGLKKVIPMRNWSNAHHWLIWHGRRVC 189
Query: 207 KARKPQCQSCIISNLCKR 224
AR+P C++C ++++C
Sbjct: 190 HARRPSCETCFLADVCPS 207
>gi|288928383|ref|ZP_06422230.1| endonuclease III [Prevotella sp. oral taxon 317 str. F0108]
gi|288331217|gb|EFC69801.1| endonuclease III [Prevotella sp. oral taxon 317 str. F0108]
Length = 216
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F + P EL + + F L+VA LLSAQ TD +N+ T LF
Sbjct: 1 MTRNERYKYILDYFRAQAPVVTTELEFGSAFQLLVATLLSAQCTDKRINQVTPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T ++M +++ YI+++ K+ ++++++ L+++F ++P T LT LPG+GR
Sbjct: 61 TAEEMAKAEVEEVFEYIKSVSYPNAKANHLVAMARKLVDDFKGEMPSTTAELTTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ F P + VDTH+FR+S+R+GL TP KVEQ LLR IP AH+
Sbjct: 121 KTANVLQAVWFDKPNMAVDTHVFRVSHRMGLVSKKANTPLKVEQELLRHIPSVDVNKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC +RKP+C+ C+ +++C ++
Sbjct: 181 WLLLHGRYVCVSRKPKCEECVFNDICPKL 209
>gi|123968399|ref|YP_001009257.1| putative endonuclease [Prochlorococcus marinus str. AS9601]
gi|123198509|gb|ABM70150.1| putative endonuclease [Prochlorococcus marinus str. AS9601]
Length = 217
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 119/201 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N +TL+VAV+LSAQSTD VN+ TK LF++AD
Sbjct: 1 MRKSERAEIISRELKKLYPSPPIPLDHTNAYTLLVAVVLSAQSTDKKVNELTKSLFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+KM+ +G K + YI+ +G+ +KS+NI +LS +LI + + +P T E L LPG+G
Sbjct: 61 NPEKMVKLGIKGIYEYIKFLGLSNQKSKNIYNLSKLLIEKHKSIVPNTFEELESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F IP+ VDTHI R++ R GL+ G + + E+ L +I P H +
Sbjct: 121 KTASVVMSQVFKIPSFPVDTHIHRLAQRWGLSNGDSVVQTEEDLKKIFPVNDWNTLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C +
Sbjct: 181 IFYGREYCTARGCDGTKCYLC 201
>gi|326564044|gb|EGE14288.1| endonuclease III [Moraxella catarrhalis 12P80B1]
Length = 217
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 89/199 (44%), Positives = 134/199 (67%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ F + P EL+Y + F L++AV+LSAQ+TD +VN AT LF++A+TP+ +
Sbjct: 5 KRLAFFQKLAKHIKEPVTELHYSSEFELLIAVMLSAQATDKSVNIATDKLFKVANTPKAI 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L +G L++YI +IG+Y K+ N+I LI + + ++P+T L L G+GRK ANV
Sbjct: 65 LDLGLDNLKSYISSIGLYNSKAANVIKTCQDLIAKHNGQVPRTRSELEALAGVGRKTANV 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AFG P + VDTHIFR+SNR GLA GKT VE++L+ IP + +AH++L+LHGR
Sbjct: 125 VLNTAFGEPVMAVDTHIFRVSNRTGLATGKTVLAVEKALMMRIPDEFLVDAHHYLILHGR 184
Query: 204 YVCKARKPQCQSCIISNLC 222
Y C AR+P+C +C++ + C
Sbjct: 185 YTCTARQPKCGACVVFDEC 203
>gi|326791276|ref|YP_004309097.1| endonuclease III [Clostridium lentocellum DSM 5427]
gi|326542040|gb|ADZ83899.1| endonuclease III [Clostridium lentocellum DSM 5427]
Length = 230
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +++ + +P L++ F L++A +LSAQ TD VN+ T LF+
Sbjct: 1 MKQKQQIAFLLDTLDTYYPKEVICYLHHRTPFELLIATILSAQCTDDRVNQVTPGLFKQF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ K ++ I++ G Y+ K++NII+ S L+ F+ ++P +E L L G+G
Sbjct: 61 PNVEAFATAELKDVEEAIKSTGFYKNKAKNIIACSRRLVECFNGEVPSDIESLVTLAGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANVI F IP+I VDTH+ RIS R G+ P + P ++E+ L+ +P H +
Sbjct: 121 RKTANVIRGNIFHIPSIVVDTHVKRISIRWGITPYEDPVQIEKDLMTKLPDSHWIRYNTQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
++ HGR +C AR P+C +C+ + C
Sbjct: 181 VIAHGRSICTARSPKCLNCMFLSHCPY 207
>gi|260435718|ref|ZP_05789688.1| endonuclease III [Synechococcus sp. WH 8109]
gi|260413592|gb|EEX06888.1| endonuclease III [Synechococcus sp. WH 8109]
Length = 217
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 114/201 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E I ++P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRRSERVEVILQRLHEQYPETPIPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGA 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M + E+++ +IR +G+ + K++N+ L+ IL+ +D +PQ+ E L LPG+G
Sbjct: 61 TPAAMAELEEEQILAFIRQLGLAKTKAKNVRRLAQILVTAYDGDVPQSFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + + EQ L R+ P K+ H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSDGSSVGRTEQDLKRLFPKKYWNRLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ GR C AR C +
Sbjct: 181 IFWGREFCTARGCDGTVCPMC 201
>gi|225419859|ref|ZP_03762162.1| hypothetical protein CLOSTASPAR_06200 [Clostridium asparagiforme
DSM 15981]
gi|225041483|gb|EEG51729.1| hypothetical protein CLOSTASPAR_06200 [Clostridium asparagiforme
DSM 15981]
Length = 219
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ +++I ++ + L + + L++AV++SAQ TD VN T LF DT +
Sbjct: 12 ERIQKILAALDREYGTEYRCYLNHETPWQLLIAVIMSAQCTDARVNMVTADLFRKYDTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
K K+L+ I + G Y K++NII+ L+++ +++P+T+E LT L G+GRK A
Sbjct: 72 KFANADLKELEQDIHSTGFYHMKAKNIIACCRDLVDKHGSEVPRTIEELTALAGVGRKTA 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
NVI + P+I VDTH+ RIS ++GL + P K+EQ L++ +P H + ++
Sbjct: 132 NVIRGNIYNEPSIVVDTHVKRISRKLGLTKSEDPVKIEQDLMKALPRDHWILWNIHIITL 191
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
GR +C AR+P+C C + C
Sbjct: 192 GRSICIARRPKCGECFLREFCP 213
>gi|206601604|gb|EDZ38087.1| Endonuclease III/Nth [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 4/227 (1%)
Query: 2 VSSKKSDSYQGNSPLGCLYT----PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLL 57
V ++K + P L P L ++ S P P+ EL N F L+VA +L
Sbjct: 4 VRTRKKPDKKQPGPAASLPLDPGGPAPLGQVLARLSESIPDPRMELDAKNPFELLVATVL 63
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
SAQSTD VN T LF + + ++ IR+ G + +KS +I+ L+ L+
Sbjct: 64 SAQSTDRMVNSVTPALFARFPDATSLQHADPETVEGLIRSTGFFHRKSLHIVRLAKELVR 123
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+ ++P +E L LPG+GRK A+VIL+ F +P I VDTH+ R+S R+GL + P
Sbjct: 124 RYRGEVPPRMEDLLTLPGVGRKTASVILAHGFHLPAIPVDTHVTRVSLRLGLTVSRDPGV 183
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+E+ L R++ K L+LHGRYVC ARKP C +C++S++C
Sbjct: 184 IEEDLKRLMDEKDWIAGSSRLLLHGRYVCLARKPLCSNCVLSDICPS 230
>gi|121609421|ref|YP_997228.1| endonuclease III [Verminephrobacter eiseniae EF01-2]
gi|121554061|gb|ABM58210.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Verminephrobacter eiseniae EF01-2]
Length = 212
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 138/205 (67%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + F P+P EL Y + F L+ AVLLSAQ+TDV VNKAT+ LF +A+T
Sbjct: 1 MQRESIAPFFAALQAANPTPGTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFAVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G L+++IRTIG+Y+ K+ +++ IL+ +P+T E L LPG+GRK
Sbjct: 61 PQAMLDLGLAGLESHIRTIGLYKSKARHLLHSCRILVEHHGGVVPRTREALQTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT+ VD HIFR+SNR GLAPGK P VE LL+ +P +AH+WL+
Sbjct: 121 TANVVLNVAFGEPTMAVDRHIFRVSNRTGLAPGKNPLAVELQLLQRVPQTCAVDAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
L GRYVC+ARKP+CQ C+++ C
Sbjct: 181 LLGRYVCQARKPRCQQCLVAAYCDF 205
>gi|327540086|gb|EGF26680.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodopirellula baltica
WH47]
Length = 219
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 114/202 (56%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + +P P L + + FTL+VAVLLSAQ TD VN+ T LF +A
Sbjct: 2 AMLKKERAAIVLERLNTLYPDPPIPLDHTDQFTLLVAVLLSAQCTDKKVNEITPELFSVA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP KM +GE+ + IR +G+ ++K++ + LS +LI+ + ++P T E L LPG+G
Sbjct: 62 GTPSKMRELGEEGILEIIRPLGLSKQKAKALAKLSGMLIDLHEGQVPSTFEELEALPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V++S AFG P VDTHI R++ R GL+ GK+ + E+ L + P H
Sbjct: 122 HKTASVVMSQAFGFPAFPVDTHIHRLAQRWGLSSGKSVVQTERDLKSLFPESSWNKLHLQ 181
Query: 198 LVLHGRYVCKARKPQCQSCIIS 219
++ +GR C AR + C +
Sbjct: 182 IIFYGREFCTARGCDGRVCELC 203
>gi|331086689|ref|ZP_08335766.1| hypothetical protein HMPREF0987_02069 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409855|gb|EGG89290.1| hypothetical protein HMPREF0987_02069 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 213
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ K E+ ++P + L Y + L++ V L+AQ TD VN + L+E
Sbjct: 1 MAKTKKQKLALEVIERLREEYPDAECTLDYDQAWKLLIGVRLAAQCTDERVNIVVEKLYE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A +++ +R G+ + K+ +I + IL ++ +IP+T + L +LPG
Sbjct: 61 KFPDVDALAAADVAEIEEIVRPCGLGKSKARDISACMKILKEQYGGQIPKTFDELLKLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNA 194
+GRK AN+I+ FG P I DTH R+ NRIGL G P KVE L +IIPP+ +
Sbjct: 121 VGRKSANLIMGDVFGEPAIVTDTHCIRLVNRIGLVDGIKEPKKVEMELWKIIPPEEGSDF 180
Query: 195 HYWLVLHGRYVCKAR-KPQCQSCIISNLC 222
+ LV HGR VC AR KP C C ++++C
Sbjct: 181 CHRLVYHGREVCTARTKPHCDRCCLADIC 209
>gi|51892865|ref|YP_075556.1| A/G-specific adenine glycosylase [Symbiobacterium thermophilum IAM
14863]
gi|51856554|dbj|BAD40712.1| A/G-specific adenine glycosylase [Symbiobacterium thermophilum IAM
14863]
Length = 365
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + + V+ ++ Q+ V + T + +
Sbjct: 3 DRLLDWYSASARDLPWRRTRDPYHIWVSEIMLQQTRVETVIPYYERWMARFPTLEALADA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ +G Y ++ N+ + + ++ + +P + + L GIG A ILS
Sbjct: 63 PEEQVLKAWEGLGYYS-RARNLHAAAREVVARYGGTVPDDPDAVASLKGIGPYTAGAILS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+AF P VD ++ R+ R+ +A T +E+ + +IP + + L+
Sbjct: 122 IAFNRPVPAVDGNVLRVIARLYAIVDDIAQLATRRTIEELVRAMIPQDRPGDFNQALMDL 181
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
G +C R+P+C C + +LC+
Sbjct: 182 GATICTPRRPRCLLCPVRDLCE 203
>gi|260437726|ref|ZP_05791542.1| endonuclease III [Butyrivibrio crossotus DSM 2876]
gi|292809748|gb|EFF68953.1| endonuclease III [Butyrivibrio crossotus DSM 2876]
Length = 211
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + L + + + L+ A +LSAQ TD VN T+ LF+
Sbjct: 1 MTVKERALLVTKRLDEFYTTELTCYLNHDSAWQLLFATILSAQCTDARVNIVTEKLFKKY 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + K+L+ IR+ G Y K++NI + + L+ + ++P+ +E LT L G+G
Sbjct: 61 RTLEDFSKADIKELEEDIRSTGFYHNKAKNIKACATELLERHNGEVPRDIESLTALSGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANVI + P+I VDTH+ RIS ++GL P K+E L++++P H +
Sbjct: 121 RKTANVIRGNIYHEPSIVVDTHVKRISRKLGLTKEDDPVKIEFDLMKVLPKDHWILYNIQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GR +C AR P+C+ C + +LCK K
Sbjct: 181 IIRLGRNICFARNPKCEECFLRDLCKAGK 209
>gi|332663065|ref|YP_004445853.1| endonuclease III [Haliscomenobacter hydrossis DSM 1100]
gi|332331879|gb|AEE48980.1| endonuclease III [Haliscomenobacter hydrossis DSM 1100]
Length = 219
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 114/209 (54%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
N P ++ I + +P L + + +TL++AVLLSAQ TD VNK T H
Sbjct: 7 NKPPRAPGRRQKAAAIMQILEDLYPETPIPLTHQDPYTLLIAVLLSAQCTDERVNKVTPH 66
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF +AD P M A +++ IR G+ +K++ I LS IL+ + + ++PQ+ L
Sbjct: 67 LFALADNPAAMHAQSVAAIEDIIRPCGLAPRKAQAIWELSGILLEKHEGEVPQSFPALEA 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+G K A+V++S AFG+P VDTHI R++ R GL+ GK K E+ L + P
Sbjct: 127 LPGVGHKTASVVMSQAFGVPAFPVDTHIHRLAERWGLSDGKNVEKTEKDLKSLFPKDKWN 186
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNL 221
H ++ GR C AR + ++C I L
Sbjct: 187 KLHLQIIFFGRQYCPARGHKREACPICKL 215
>gi|33861359|ref|NP_892920.1| putative endonuclease [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633936|emb|CAE19261.1| putative endonuclease [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 217
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 117/201 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +PSP L + N FTL+VAV+LSAQSTD VN+ TK LF++AD
Sbjct: 1 MKKSERAEIILKELKELYPSPPIPLNHTNAFTLLVAVVLSAQSTDKKVNELTKELFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+KM +G ++ YI+ +G+ +KS+NI LS ++I EF ++P + E L LPG+G
Sbjct: 61 TPEKMKELGVSRIYEYIKQLGLSNQKSKNIYLLSKLIIEEFHGQVPNSFEELESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F IP+ VDTHI R+S R G+ G + E+ L I P H +
Sbjct: 121 KTASVVMSQVFNIPSFPVDTHIHRLSQRWGITNGDNVRQTEKDLKNIFPISEWNTLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C++
Sbjct: 181 IFYGREHCTARGCDGTKCLMC 201
>gi|32473510|ref|NP_866504.1| endonuclease III [Rhodopirellula baltica SH 1]
gi|32398190|emb|CAD78285.1| endonuclease III [Rhodopirellula baltica SH 1]
Length = 219
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 113/202 (55%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + +P P L + + FTL+VAVLLSAQ TD VN+ T LF +A
Sbjct: 2 AMLKKERAAIVLERLNTLYPDPPIPLDHTDEFTLLVAVLLSAQCTDKKVNEITPELFSVA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP KM +GE+ + IR +G+ ++K++ + LS +LI+ ++P T E L LPG+G
Sbjct: 62 GTPSKMRELGEEGILEIIRPLGLSKQKAKALAKLSGMLIDLHKGQVPSTFEELEALPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V++S AFG P VDTHI R++ R GL+ GK+ + E+ L + P H
Sbjct: 122 HKTASVVMSQAFGFPAFPVDTHIHRLAQRWGLSSGKSVVQTERDLKSLFPESSWNKLHLQ 181
Query: 198 LVLHGRYVCKARKPQCQSCIIS 219
++ +GR C AR + C +
Sbjct: 182 IIFYGREFCTARGCDGRVCELC 203
>gi|307273846|ref|ZP_07555068.1| endonuclease III [Enterococcus faecalis TX0855]
gi|306509531|gb|EFM78579.1| endonuclease III [Enterococcus faecalis TX0855]
Length = 215
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 78/210 (37%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ + EL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ I+TIG+YR K++NI + + L+ F+ ++PQT + L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++ AFG P VDTH+ R+S R+ + +VEQ+L+R +P + H+
Sbjct: 121 KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C A P+C++C + +C+ K+
Sbjct: 181 MIFFGRYHCLAIAPKCEACPLLYMCQEGKE 210
>gi|260912268|ref|ZP_05918819.1| endonuclease III [Prevotella sp. oral taxon 472 str. F0295]
gi|260633569|gb|EEX51708.1| endonuclease III [Prevotella sp. oral taxon 472 str. F0295]
Length = 216
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F + P EL + + F L+VA LLSAQ TD +N+ T LF
Sbjct: 1 MTRNERYKYILDYFRAQAPIVTTELEFGSAFQLLVATLLSAQCTDKRINQVTPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M +++ Y++++ K+ ++++++ L+++F ++P T LT LPG+GR
Sbjct: 61 TAEAMAKAEVEEVFEYVKSVSYPNAKANHLVAMARKLVDDFKGEMPSTTAELTTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ F P + VDTH++R+S+R+GL TP KVEQ LLR IP AH+
Sbjct: 121 KTANVMQAVWFDKPNMAVDTHVYRVSHRMGLVSKKATTPLKVEQELLRHIPSVDVNKAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC +RKP+C C+ +++C ++
Sbjct: 181 WLLLHGRYVCVSRKPKCDECVFNDICPKL 209
>gi|189485670|ref|YP_001956611.1| endonuclease III [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287629|dbj|BAG14150.1| endonuclease III [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 212
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 71/208 (34%), Positives = 116/208 (55%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + I + + + L + + F L+ A +LSAQ TD VNK TK LF+
Sbjct: 5 KKEHVVRIIKILEKDYGHVECALNFSSPFELLAATILSAQCTDERVNKVTKDLFKRYKNV 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L+NYI++ G +R K++NII + ++IN+++ +PQT++ L L G+ RK
Sbjct: 65 EDYANADILELENYIKSAGFFRNKAKNIIKSAQMVINKYNGDVPQTMKELLELSGVARKT 124
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L AFG I VDTH+ RI+N + L P K+E+ L++ IP K+ N + +
Sbjct: 125 ANVVLGSAFGKSEGIAVDTHVIRITNLLKLTEYDDPVKIEKDLMKTIPKKYWMNFSFLIQ 184
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GR +CKAR P C ++ +C ++
Sbjct: 185 TLGRIICKARNPGHIVCPLNEICPSSQK 212
>gi|311068747|ref|YP_003973670.1| endonuclease III [Bacillus atrophaeus 1942]
gi|310869264|gb|ADP32739.1| endonuclease III [Bacillus atrophaeus 1942]
Length = 219
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++E +P+ + EL + N F L+VAV LSAQ TD VN+ TK LF+
Sbjct: 1 MLNLKQIEFCLEKIGDMFPNAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ IR+IG+YR K++NI LS ++I E+ ++P+ + L +LPG+GR
Sbjct: 61 RPEDYLAVPLEELQQDIRSIGLYRNKAKNIQKLSKMIIEEYGGEVPKDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L+R +P H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKALMRKVPEDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPRCAECPLLSLCREGQK 210
>gi|290894249|ref|ZP_06557217.1| endonuclease III [Listeria monocytogenes FSL J2-071]
gi|290556188|gb|EFD89734.1| endonuclease III [Listeria monocytogenes FSL J2-071]
Length = 219
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|217963954|ref|YP_002349632.1| endonuclease III [Listeria monocytogenes HCC23]
gi|217333224|gb|ACK39018.1| endonuclease III [Listeria monocytogenes HCC23]
gi|307571476|emb|CAR84655.1| endonuclease III [Listeria monocytogenes L99]
Length = 219
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ F IP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFDIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|313618194|gb|EFR90275.1| endonuclease III [Listeria innocua FSL S4-378]
Length = 239
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 90/223 (40%), Positives = 139/223 (62%), Gaps = 1/223 (0%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
+ S + + L + K+ + +P+ EL + N F L+VAV+LSAQ TDV
Sbjct: 8 TTGSKKEKGDVNKLLSNKQTVLCIEEMAKMFPAAHCELIHKNTFELLVAVVLSAQCTDVL 67
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
VN+ T LFE P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+
Sbjct: 68 VNRVTASLFEKYHRPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSAKILAEFNGEVPR 127
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLR 184
T L LPG+GRK ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R
Sbjct: 128 THAELESLPGVGRKTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKR 187
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + +AH++++ GRY CKAR P+C +C + LC+ K+
Sbjct: 188 KLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKK 230
>gi|256374410|ref|YP_003098070.1| endonuclease III [Actinosynnema mirum DSM 43827]
gi|255918713|gb|ACU34224.1| endonuclease III [Actinosynnema mirum DSM 43827]
Length = 257
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%)
Query: 36 WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI 95
+P EL + L+VAV+LSAQ TD VN+ T LF + ++ A +L+ +
Sbjct: 32 YPDAHCELDFTTPLELLVAVVLSAQCTDKRVNQVTPALFARYRSAEEYAAADRTELEELV 91
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
R G YR K+ I L+ ++ D ++P T L +LPG+GRK ANV+L AFG+P I
Sbjct: 92 RPTGFYRNKAAAISGLAAEIVERHDGEVPGTQAELVKLPGVGRKTANVVLGDAFGVPGIT 151
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
VDTH R+ R G + P KVE ++ ++ K + + HGR VC AR P C +
Sbjct: 152 VDTHFGRLVRRWGWTTEEDPVKVEHAVGALVERKDWTLLSHRTIFHGRRVCHARTPACGA 211
Query: 216 CIISNLCKRI 225
C+++ C
Sbjct: 212 CLLAPQCPSF 221
>gi|238917625|ref|YP_002931142.1| DNA-(apurinic or apyrimidinic site) lyase [Eubacterium eligens ATCC
27750]
gi|238872985|gb|ACR72695.1| DNA-(apurinic or apyrimidinic site) lyase [Eubacterium eligens ATCC
27750]
Length = 213
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 119/208 (57%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P + L Y + + L+V+V L+AQ TD VN K L+E
Sbjct: 1 MTKKELALEVIRRLKAEYPDSECSLDYDDAWKLLVSVRLAAQCTDARVNVVVKGLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A ++++ IR G+ + K+++I + +L ++++K+P ++E L +LPG+GR
Sbjct: 61 DIASLAAASPEEIEKIIRPCGLGKSKAKDICACMRMLHEQYNDKVPDSMEELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL K P KVE +L +I+PP+ +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVKDEKEPKKVEMALWKIVPPEEGSGLCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKR 224
V HGR VC AR P C+ C ++++CK+
Sbjct: 181 FVDHGREVCTARTTPHCERCCLNDICKK 208
>gi|152975070|ref|YP_001374587.1| endonuclease III [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152023822|gb|ABS21592.1| endonuclease III [Bacillus cytotoxicus NVH 391-98]
Length = 215
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMAKMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQ IR+IG+YR K++NI L +LI+E+D K+P + LT+LPG+GR
Sbjct: 61 TPEDYLKVSLEELQQDIRSIGLYRNKAKNIQKLCRMLIDEYDGKVPADRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+G+ + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPMEEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+KPQC+ C + +C+ K+
Sbjct: 181 LIFFGRYHCKAQKPQCEVCPLLEICREGKK 210
>gi|227544748|ref|ZP_03974797.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Lactobacillus reuteri CF48-3A]
gi|300909006|ref|ZP_07126469.1| endonuclease III [Lactobacillus reuteri SD2112]
gi|227185288|gb|EEI65359.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Lactobacillus reuteri CF48-3A]
gi|300894413|gb|EFK87771.1| endonuclease III [Lactobacillus reuteri SD2112]
Length = 213
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ P E+ + +P L ++ ++A +LSAQSTD +VN+ T LF
Sbjct: 1 MLPPDEIRYSIKVMRQTFPEAGTTLIADTNYHFLLATILSAQSTDQSVNEVTPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + + +++ YI+ +G+YR K++ ++ S ++ +F+ ++P TL+ L L G+GR
Sbjct: 61 LPADLAGVEPAEVEPYIKRLGLYRNKAKFLVKTSQQIVTDFNGEVPHTLKELMTLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ F IP VDTH+ R++ R+ + K + +E+ L++ IPP+H +AH+
Sbjct: 121 KVADVVLAECFNIPAFPVDTHVSRVARRLRIVEPKASVLAIEKKLMKTIPPEHWLDAHHS 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ GRYVC AR P+CQ+C + +LC
Sbjct: 181 MIFWGRYVCTARNPKCQTCPLLSLC 205
>gi|323489718|ref|ZP_08094945.1| endonuclease III [Planococcus donghaensis MPA1U2]
gi|323396849|gb|EGA89668.1| endonuclease III [Planococcus donghaensis MPA1U2]
Length = 226
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + KE L +P EL + N F L++A LLSAQ TD VN+ T LF+
Sbjct: 1 MMSKKEWLACLEEMDLMFPDAHCELVHRNPFDLLIATLLSAQCTDKLVNRVTADLFQKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ +A+ ++LQ IR+IG++R K++NI +LS ILI+E ++ +P + L LPG+GR
Sbjct: 61 KPEDYVAVSLEELQQDIRSIGLFRNKAKNIQALSQILIDEHNSVVPADRDLLMTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP + VDTH+ R++ R+GL+ P +VE+++++ P H+
Sbjct: 121 KTANVVVSVAFGIPALAVDTHVERVAKRLGLSRWKDNPLQVEETIMKKTPADDWSKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CK++ P C C + + C+ ++
Sbjct: 181 IIFFGRYHCKSQNPGCHICPLFDRCREGQK 210
>gi|308174025|ref|YP_003920730.1| endonuclease III [Bacillus amyloliquefaciens DSM 7]
gi|307606889|emb|CBI43260.1| endonuclease III [Bacillus amyloliquefaciens DSM 7]
gi|328552849|gb|AEB23341.1| endonuclease III [Bacillus amyloliquefaciens TA208]
gi|328912353|gb|AEB63949.1| endonuclease III [Bacillus amyloliquefaciens LL3]
Length = 219
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++E S +P + EL + N F L+VAV LSAQ TD VN+ TK LF+
Sbjct: 1 MLNLKQIEYCLDKISDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ I++IG+YR K++NI LS ++I E+ ++P+ + L +LPG+GR
Sbjct: 61 RPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIEEYGGEVPKDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPKEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPRCAECPLLSLCREGQK 210
>gi|315282916|ref|ZP_07871216.1| endonuclease III [Listeria marthii FSL S4-120]
gi|313613434|gb|EFR87278.1| endonuclease III [Listeria marthii FSL S4-120]
Length = 219
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELIHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPDCPTCPLLYLCREGKK 210
>gi|254445004|ref|ZP_05058480.1| endonuclease III [Verrucomicrobiae bacterium DG1235]
gi|198259312|gb|EDY83620.1| endonuclease III [Verrucomicrobiae bacterium DG1235]
Length = 229
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 116/205 (56%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
G + + + +P+P L + + +TL+VAVLLSAQ TD VNK T L+++
Sbjct: 11 GGMTKKERAAYVDGELERLYPNPPIPLDHTDAYTLLVAVLLSAQCTDERVNKVTPLLWKL 70
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
AD P+ M + + ++ IR G+ +KS+ I LS IL+++++ ++P+ E L LPG+
Sbjct: 71 ADRPETMRLVPVEAIREVIRPCGLSPRKSQAIRDLSQILVDKYEGQVPEGFEELEALPGV 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
G K A+V++S AFG P+ VDTHI R+ R GL GK + E L R+ P + + H
Sbjct: 131 GHKTASVVMSQAFGHPSFPVDTHIHRLGQRWGLTSGKNVVQTEADLKRLFPRERWNHLHL 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNL 221
++ +GR C AR C+I +
Sbjct: 191 QIIYYGREYCTARGCDGTVCLICRM 215
>gi|325681145|ref|ZP_08160675.1| putative endonuclease III [Ruminococcus albus 8]
gi|324107067|gb|EGC01353.1| putative endonuclease III [Ruminococcus albus 8]
Length = 212
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 106/204 (51%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + L ++P L Y L++A LSAQ TD VN TK LF +
Sbjct: 6 KKELAVQAIELLEKQYPGAVCSLIYTKPHELLIATRLSAQCTDARVNIVTKDLFAKYRSI 65
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
++ ++ ++ G+Y+ K+++I + L + +++ +P TLE LT+L GIGRK
Sbjct: 66 EEFADADIADIEEIVKPCGLYKTKAKSIKEMCIQLRDGYNSTLPDTLEELTKLSGIGRKT 125
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
AN+I+ + P + DTH RI+ R+GL K P KVE L +I+PP + + LV+
Sbjct: 126 ANLIMGDIYHKPAVVTDTHCIRITGRLGLVKSKEPAKVEAELWKILPPDKSNDFCHRLVM 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GR C AR P+C C + +C
Sbjct: 186 FGREYCTARSPKCGGCPLREICPS 209
>gi|171059336|ref|YP_001791685.1| endonuclease III [Leptothrix cholodnii SP-6]
gi|170776781|gb|ACB34920.1| endonuclease III [Leptothrix cholodnii SP-6]
Length = 212
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 99/205 (48%), Positives = 144/205 (70%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ F P P EL Y + F L+ AVLLSAQ+TDV+VNKAT+ LF +A+T
Sbjct: 1 MQADQIQRFFSTLRAANPMPASELEYSSVFELLAAVLLSAQATDVSVNKATRRLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P K+LA+GE+++ +I+TIG+YR K++N++ +L+ ++P + E L LPG+GRK
Sbjct: 61 PAKLLALGEERVAEHIKTIGLYRNKAKNLVETCRLLLARHGGQVPHSREALEALPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++AFG PT VDTH+FR+ NR GLAPG+TP++VE LL +P + + AH+WL+
Sbjct: 121 TANVVLNVAFGEPTCAVDTHVFRVGNRTGLAPGRTPHEVEMQLLERVPDEFKVEAHHWLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
LHGRYVC+ARKPQC C +++ C
Sbjct: 181 LHGRYVCQARKPQCWLCSVADCCDF 205
>gi|296333028|ref|ZP_06875485.1| endonuclease III [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305674868|ref|YP_003866540.1| endonuclease III [Bacillus subtilis subsp. spizizenii str. W23]
gi|296149879|gb|EFG90771.1| endonuclease III [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413112|gb|ADM38231.1| endonuclease III [Bacillus subtilis subsp. spizizenii str. W23]
Length = 219
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++E +P + EL + N F L+VAV LSAQ TD VN+ TK LF+
Sbjct: 1 MLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ I++IG+YR K++NI LS ++I ++ ++P+ + L +LPG+GR
Sbjct: 61 RPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGGEVPRDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L+R +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKVPKEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPRCAECPLLSLCREGQK 210
>gi|327462992|gb|EGF09313.1| endonuclease III [Streptococcus sanguinis SK1]
gi|332362317|gb|EGJ40117.1| endonuclease III [Streptococcus sanguinis SK1056]
Length = 209
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPDLFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAMAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRTELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMEVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|289643206|ref|ZP_06475333.1| endonuclease III [Frankia symbiont of Datisca glomerata]
gi|289506977|gb|EFD27949.1| endonuclease III [Frankia symbiont of Datisca glomerata]
Length = 243
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 106/215 (49%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ L + +I + P + L + N L+ A +LSAQ TD VN+ T
Sbjct: 7 ADAATESPLARTRRARKIVRILGELHPDARIALNFGNPLELLAATVLSAQCTDKKVNEVT 66
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
LF T A +L+ +R G +R K+ ++I + L + FD +P L+ L
Sbjct: 67 PTLFAKYRTADDYAAADRAELEAILRPTGFFRAKANSLIGIGAALADRFDGNVPPRLDDL 126
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+GRK ANV+L F P I VDTH+ R+S R+GL P +VE L +++ +
Sbjct: 127 VTLPGVGRKTANVVLGHIFDQPGITVDTHVGRLSRRLGLTTNTDPVRVESDLAKLLERRD 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
A L+ HGR VC AR+P C C I+ LC
Sbjct: 187 YTIASDRLIFHGRRVCHARRPACGVCGIARLCPSF 221
>gi|260583584|ref|ZP_05851332.1| endonuclease III [Granulicatella elegans ATCC 700633]
gi|260158210|gb|EEW93278.1| endonuclease III [Granulicatella elegans ATCC 700633]
Length = 212
Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + E +P EL + N F L++A +LSAQ+TDV VNK T LFE
Sbjct: 1 MLSKTKTIEAVQTMGDLFPDAHCELNHRNAFELLIATILSAQATDVGVNKVTPKLFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP ++ A E+++ I+++G+YR K++NI + L+ FD ++P T E L L G+GR
Sbjct: 61 TPARLAAASEEEVIECIQSLGLYRNKAKNIRLCAQQLMERFDGEVPCTREELVSLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF IP VDTH+ RIS R+ + K +VE++L R IP + AH+W
Sbjct: 121 KTANVVMSVAFNIPAFAVDTHVERISKRLQICRQKDTVLEVEETLCRKIPKELWSRAHHW 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C ARKP+C C + +C ++
Sbjct: 181 MIFFGRYHCIARKPKCHECPLLEMCAFGQR 210
>gi|293365147|ref|ZP_06611864.1| endonuclease III [Streptococcus oralis ATCC 35037]
gi|307703685|ref|ZP_07640626.1| endonuclease III [Streptococcus oralis ATCC 35037]
gi|291316597|gb|EFE57033.1| endonuclease III [Streptococcus oralis ATCC 35037]
gi|307622520|gb|EFO01516.1| endonuclease III [Streptococcus oralis ATCC 35037]
Length = 209
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ I+PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEKWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|16079291|ref|NP_390115.1| endonuclease III [Bacillus subtilis subsp. subtilis str. 168]
gi|221310150|ref|ZP_03591997.1| endonuclease III [Bacillus subtilis subsp. subtilis str. 168]
gi|221314472|ref|ZP_03596277.1| endonuclease III [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319394|ref|ZP_03600688.1| endonuclease III [Bacillus subtilis subsp. subtilis str. JH642]
gi|221323670|ref|ZP_03604964.1| endonuclease III [Bacillus subtilis subsp. subtilis str. SMY]
gi|321311703|ref|YP_004203990.1| endonuclease III [Bacillus subtilis BSn5]
gi|729418|sp|P39788|END3_BACSU RecName: Full=Probable endonuclease III; AltName:
Full=DNA-(apurinic or apyrimidinic site) lyase
gi|533099|gb|AAA80005.1| endonuclease III [Bacillus subtilis subsp. subtilis str. 168]
gi|1146249|gb|AAB38457.1| endonuclease III [Bacillus subtilis subsp. subtilis str. 168]
gi|2634652|emb|CAB14150.1| endonuclease III [Bacillus subtilis subsp. subtilis str. 168]
gi|291484656|dbj|BAI85731.1| endonuclease III [Bacillus subtilis subsp. natto BEST195]
gi|320017977|gb|ADV92963.1| endonuclease III [Bacillus subtilis BSn5]
Length = 219
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++E +P + EL + N F L+VAV LSAQ TD VN+ TK LF+
Sbjct: 1 MLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ I++IG+YR K++NI LS ++I ++ ++P+ + L +LPG+GR
Sbjct: 61 RPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGGEVPRDRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L+R +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKVPKEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPRCAECPLLSLCREGQK 210
>gi|257783933|ref|YP_003179150.1| endonuclease III [Atopobium parvulum DSM 20469]
gi|257472440|gb|ACV50559.1| endonuclease III [Atopobium parvulum DSM 20469]
Length = 223
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 120/216 (55%), Gaps = 2/216 (0%)
Query: 14 SPLGCLYTP-KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
P T + E+ +PS + L Y + FTL+++V+LSAQ+TD VNK T
Sbjct: 1 MPRESKKTKVERGVELCRRMHKLYPSVQSALDYHDAFTLLISVMLSAQTTDAAVNKVTPE 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF M A ++ I+TIG +R K+++ + + IL+ E+ ++P T+E L
Sbjct: 61 LFRRWPDAPSMAAANIVEVGEVIQTIGFWRAKAKHCVETAQILLTEYGGEVPGTMEDLVT 120
Query: 133 LPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+GRK AN++L+ F + I VDTH++RIS R+ L+ TP E+ LL ++P +
Sbjct: 121 LPGVGRKTANIVLNKMFNVVDGIAVDTHVYRISKRMRLSSASTPLAAEKDLLALLPHELW 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + + GR C AR P+C C +S++C +Q
Sbjct: 181 KDVNEEWIHFGRETCTARNPKCVGCPMSDICPSYEQ 216
>gi|254831505|ref|ZP_05236160.1| endonuclease III (DNA repair) [Listeria monocytogenes 10403S]
Length = 219
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLERKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|116873329|ref|YP_850110.1| endonuclease III [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742207|emb|CAK21331.1| endonuclease III [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 219
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 RPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSQRILTEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKEMWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPDCPTCPLLYLCREGKK 210
>gi|225850013|ref|YP_002730247.1| endonuclease III [Persephonella marina EX-H1]
gi|225646620|gb|ACO04806.1| endonuclease III [Persephonella marina EX-H1]
Length = 215
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 118/202 (58%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +P P +L + N F L+VA +L+AQ+TD VN+ T F+ P+ +
Sbjct: 12 QAVIEGLKKHFPEPWIDLKFSNPFQLLVATILAAQATDKKVNEVTAVFFKKYPDPESIAK 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++++N I+ I YR+K++ + ++ EF+ KIP ++ LT+LPG+GRK A+VIL
Sbjct: 72 APLEQIENDIKQINFYRRKAKLLKECCEAIVKEFNGKIPDNIDDLTKLPGVGRKTASVIL 131
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
AF P I VDTH+ R+S R+G+ P+++E+ L ++ +VL GRY+
Sbjct: 132 VNAFNKPAIVVDTHVKRVSQRLGITESNNPDRIEKDLAEFFSKENWIFISKAMVLFGRYI 191
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
CKA+ P+C+ C + ++C K+
Sbjct: 192 CKAKNPKCKECALLDICPYDKK 213
>gi|313632665|gb|EFR99642.1| endonuclease III [Listeria seeligeri FSL N1-067]
Length = 232
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 11 VTKLLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
P+ LA+ +L + IR+IG+YR K++NI LS L+ EF+ ++PQT L LPG
Sbjct: 71 KYHRPEDYLAVSLDELMDDIRSIGLYRNKAKNIQGLSQKLLTEFNGEVPQTHAELESLPG 130
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +A
Sbjct: 131 VGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELWSDA 190
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H++++ GRY CKAR P+C +C + LC+ K+
Sbjct: 191 HHYMIFFGRYHCKARNPECPTCPLLYLCREGKK 223
>gi|16803933|ref|NP_465418.1| endonuclease III (DNA repair) [Listeria monocytogenes EGD-e]
gi|47096477|ref|ZP_00234069.1| endonuclease III [Listeria monocytogenes str. 1/2a F6854]
gi|254827221|ref|ZP_05231908.1| endonuclease III [Listeria monocytogenes FSL N3-165]
gi|254899409|ref|ZP_05259333.1| endonuclease III (DNA repair) [Listeria monocytogenes J0161]
gi|254912452|ref|ZP_05262464.1| endonuclease III [Listeria monocytogenes J2818]
gi|254936779|ref|ZP_05268476.1| endonuclease III [Listeria monocytogenes F6900]
gi|284802339|ref|YP_003414204.1| endonuclease III (DNA repair) [Listeria monocytogenes 08-5578]
gi|284995481|ref|YP_003417249.1| endonuclease III (DNA repair) [Listeria monocytogenes 08-5923]
gi|16411347|emb|CAC99972.1| probable endonuclease III (DNA repair) [Listeria monocytogenes
EGD-e]
gi|47015130|gb|EAL06071.1| endonuclease III [Listeria monocytogenes str. 1/2a F6854]
gi|258599604|gb|EEW12929.1| endonuclease III [Listeria monocytogenes FSL N3-165]
gi|258609374|gb|EEW21982.1| endonuclease III [Listeria monocytogenes F6900]
gi|284057901|gb|ADB68842.1| endonuclease III (DNA repair) [Listeria monocytogenes 08-5578]
gi|284060948|gb|ADB71887.1| endonuclease III (DNA repair) [Listeria monocytogenes 08-5923]
gi|293590434|gb|EFF98768.1| endonuclease III [Listeria monocytogenes J2818]
Length = 219
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|153852865|ref|ZP_01994302.1| hypothetical protein DORLON_00284 [Dorea longicatena DSM 13814]
gi|149754507|gb|EDM64438.1| hypothetical protein DORLON_00284 [Dorea longicatena DSM 13814]
Length = 210
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + ++P L Y + + L+V+V L+AQ TD VN + L+
Sbjct: 1 MDKQELALVVIDRLKKEYPDAGCTLDYDDAWKLLVSVRLAAQCTDARVNVVVESLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++++ +R G+ + K+ +I + +L +E+D K+P L +LPG+GR
Sbjct: 61 DVNALAEATPEEIEEIVRPCGLGKSKARDISACMRMLRDEYDGKVPDDFNKLLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL P KVE L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDEIKEPKKVEMELWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C+ C ++++C
Sbjct: 181 LVYHGRDVCTARTKPHCEKCCLADIC 206
>gi|328956172|ref|YP_004373505.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Coriobacterium glomerans PW2]
gi|328456496|gb|AEB07690.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Coriobacterium glomerans PW2]
Length = 220
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 125/208 (60%), Gaps = 4/208 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E+ ++ S + L + N + L+++VLLSAQ+TD VN+ T LF T
Sbjct: 9 KRTRAIEVCKRLEARYGSVECFLDHENPYRLVISVLLSAQTTDAQVNRVTPELFARWPTA 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +++ + IR++G Y+ K+++ + + +++++F ++P ++ L RLPG+GRK
Sbjct: 69 EALASASPEEVADVIRSLGFYKTKAKHAVEAAQMIVSDFGGEVPADMKQLMRLPGVGRKT 128
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHY 196
AN++L+++F I I VDTH+ RI++R+GL+P P K EQ LL ++P + + ++
Sbjct: 129 ANIVLNVSFNIVEGIAVDTHVNRIAHRLGLSPRTHLNDPLKTEQDLLGLLPSQWWGSVNH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ GR +C AR P+C C ++++C
Sbjct: 189 QWIKLGREICIARNPRCNLCPLADICPS 216
>gi|322391726|ref|ZP_08065193.1| endonuclease III [Streptococcus peroris ATCC 700780]
gi|321145436|gb|EFX40830.1| endonuclease III [Streptococcus peroris ATCC 700780]
Length = 209
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++F+ ++PQT E L L G+GR
Sbjct: 62 TPQAMAEASESEIASHISRLGLYRNKAKFLKKCAQQLLDDFNGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVLSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMEVLPPEEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|306825486|ref|ZP_07458826.1| endonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315612918|ref|ZP_07887829.1| endonuclease III [Streptococcus sanguinis ATCC 49296]
gi|304432424|gb|EFM35400.1| endonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315315028|gb|EFU63069.1| endonuclease III [Streptococcus sanguinis ATCC 49296]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVLSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|289435243|ref|YP_003465115.1| endonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171487|emb|CBH28031.1| endonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 219
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 133/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELIHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ L + +L + IR+IG+YR K++NI LS L+ EF+ ++PQT L LPG+GR
Sbjct: 61 RPEDYLTVSLDELMDDIRSIGLYRNKAKNIQGLSQKLLTEFNGEVPQTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|306829260|ref|ZP_07462450.1| endonuclease III [Streptococcus mitis ATCC 6249]
gi|331266656|ref|YP_004326286.1| endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site)
lyase [Streptococcus oralis Uo5]
gi|304428346|gb|EFM31436.1| endonuclease III [Streptococcus mitis ATCC 6249]
gi|326683328|emb|CBZ00946.1| endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site)
lyase [Streptococcus oralis Uo5]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|302339269|ref|YP_003804475.1| endonuclease III [Spirochaeta smaragdinae DSM 11293]
gi|301636454|gb|ADK81881.1| endonuclease III [Spirochaeta smaragdinae DSM 11293]
Length = 217
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 117/198 (59%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ WP + L + N + L++AV+LS+++TD VN T+ LF + +
Sbjct: 10 VVERLLQAWPKAETLLRHDNCYQLMIAVILSSRTTDAQVNVVTEKLFRRFPDAKSLAEAD 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+++++ I ++G YR K+ +I++ + L+ +FD +P+++E L +PG+GRKGANV+L
Sbjct: 70 GEEVEDLIHSVGFYRVKARHIVAAAAALLEKFDGSVPESMEELLMIPGLGRKGANVVLGD 129
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
FG P I VDTH R+ RIGL+ + P VE+ + +IP Q + LHGRYVC
Sbjct: 130 CFGKPAIIVDTHFGRVVRRIGLSDSENPAIVEREVKSLIPSADQTDFSMAANLHGRYVCL 189
Query: 208 ARKPQCQSCIISNLCKRI 225
+R P+C C++ ++C+
Sbjct: 190 SRNPRCSECVVQDVCRYF 207
>gi|301058277|ref|ZP_07199317.1| endonuclease III [delta proteobacterium NaphS2]
gi|300447611|gb|EFK11336.1| endonuclease III [delta proteobacterium NaphS2]
Length = 213
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 113/204 (55%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++EIF + + K L Y F L+++ +LSAQ TD VN TK LF+ +P
Sbjct: 7 KTARVKEIFKILDPLYTREKTALKYKTPFQLLISTILSAQCTDKQVNSVTKTLFQKYRSP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
L+ +L+ IR G +R K+++I L+ +F ++P T+E L +LPG+GRK
Sbjct: 67 ADFLSAPISELEMDIRPTGFFRNKTKSIKGCCQGLVEKFGGEVPATMEELIKLPGVGRKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
AN +L AF +P + VDTH+ R++ R+ L P+K+E L +++P + L+
Sbjct: 127 ANCVLGAAFDVPGVVVDTHVKRLAVRLSLTENNHPDKIEMDLQKLLPKERWRRFSDILIY 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC ARKP +C + +LC
Sbjct: 187 HGRAVCNARKPDHTACAVFSLCPS 210
>gi|325066668|ref|ZP_08125341.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces oris K20]
Length = 224
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 6/224 (2%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+SS+ + + + + + +P L + F L+VA +LSAQ+
Sbjct: 1 MSSETAGAEVAMTTEPA----RRAGAVDDELMTLYPDAACALDHDGPFQLLVATVLSAQT 56
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
TD VN T LFE + A + L+ +R +G R K+ +++ + L F+
Sbjct: 57 TDARVNTVTPELFERYPDAAALGAARREDLEAILRPLGFQRAKAGHLLGIGQALTERFEG 116
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P++ E L LPG+GRK ANV+L AFG P I VDTH+ R+S R+G K P +VE+
Sbjct: 117 RVPRSREELVALPGVGRKTANVVLGNAFGQPAITVDTHVGRLSRRLGWTTSKDPLRVEKD 176
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--SNLCK 223
+ + P + + L+ HGR VC AR P+C C + + LC
Sbjct: 177 IAALWEPWRWTDGCHRLIEHGRQVCSARSPRCGQCALLEAGLCP 220
>gi|322379169|ref|ZP_08053562.1| endonuclease III (nth) [Helicobacter suis HS1]
gi|322379654|ref|ZP_08053973.1| endonuclease III (nth) [Helicobacter suis HS5]
gi|321147916|gb|EFX42497.1| endonuclease III (nth) [Helicobacter suis HS5]
gi|321148400|gb|EFX42907.1| endonuclease III (nth) [Helicobacter suis HS1]
Length = 208
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ I L + P EL Y N + L+VAVLLSAQ TD VN T F+ +
Sbjct: 2 KAMIIKTLLLEHFKQPTTELIYQNPYELLVAVLLSAQCTDKRVNATTPAFFKAYPDVMSL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + I++I K++++I ++ ++ F+ +IP++ + L L GIG+K ANV
Sbjct: 62 ANASFEDVYQCIKSISYPNSKAKHLIQMAQQILQNFNGQIPRSQKELKTLAGIGQKSANV 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS+AF + VDTH+FR+S+R+GL K + E L + + H+ ++L GR
Sbjct: 122 VLSVAFNQNVLAVDTHVFRVSHRLGLTKAKNTLQTEADLSALF-KEDLGALHHAMILFGR 180
Query: 204 YVCKARKPQCQSCIISNLC 222
+CKA KPQC C + C
Sbjct: 181 RICKAIKPQCSICFLQEFC 199
>gi|254282823|ref|ZP_04957791.1| endonuclease III [gamma proteobacterium NOR51-B]
gi|219679026|gb|EED35375.1| endonuclease III [gamma proteobacterium NOR51-B]
Length = 224
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 111/202 (54%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + I + +P L +++ +TL++AVLLSAQ TD VN+ T LF +A TP
Sbjct: 10 KAERIAFIDQRLEALYGTPPIPLNHIDPYTLLIAVLLSAQCTDERVNQVTPELFALASTP 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
M+ + + ++ IR G+ +KS+ I LS IL+ + +P+ E L LPG+G K
Sbjct: 70 SAMVTLSPEDIRQIIRPCGLSPQKSKAIHRLSEILLEQHQGAVPRDFEHLEALPGVGHKT 129
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+V+++ AFG+PT VDTHI R++ R GL G+ + E+ L R P + H ++
Sbjct: 130 ASVVMAQAFGVPTFPVDTHIHRLAQRWGLTRGRNVTETERDLKRAFPIHRWNDLHLQIIY 189
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
+GR C AR + C I C
Sbjct: 190 YGREFCTARGCDGRVCEICRTC 211
>gi|46908127|ref|YP_014516.1| endonuclease III [Listeria monocytogenes serotype 4b str. F2365]
gi|226224498|ref|YP_002758605.1| endonuclease III (DNA repair) [Listeria monocytogenes Clip81459]
gi|254825611|ref|ZP_05230612.1| endonuclease III [Listeria monocytogenes FSL J1-194]
gi|254852798|ref|ZP_05242146.1| endonuclease III [Listeria monocytogenes FSL R2-503]
gi|254931935|ref|ZP_05265294.1| endonuclease III [Listeria monocytogenes HPB2262]
gi|254992080|ref|ZP_05274270.1| endonuclease III (DNA repair) [Listeria monocytogenes FSL J2-064]
gi|255521647|ref|ZP_05388884.1| endonuclease III (DNA repair) [Listeria monocytogenes FSL J1-175]
gi|300763796|ref|ZP_07073793.1| endonuclease III [Listeria monocytogenes FSL N1-017]
gi|46881397|gb|AAT04693.1| endonuclease III [Listeria monocytogenes serotype 4b str. F2365]
gi|225876960|emb|CAS05669.1| Putative endonuclease III (DNA repair) [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606125|gb|EEW18733.1| endonuclease III [Listeria monocytogenes FSL R2-503]
gi|293583487|gb|EFF95519.1| endonuclease III [Listeria monocytogenes HPB2262]
gi|293594854|gb|EFG02615.1| endonuclease III [Listeria monocytogenes FSL J1-194]
gi|300515532|gb|EFK42582.1| endonuclease III [Listeria monocytogenes FSL N1-017]
gi|328466243|gb|EGF37400.1| endonuclease III [Listeria monocytogenes 1816]
gi|332312335|gb|EGJ25430.1| Endonuclease III [Listeria monocytogenes str. Scott A]
Length = 219
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILIEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|325694996|gb|EGD36900.1| endonuclease III [Streptococcus sanguinis SK150]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMATAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRTELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|125718511|ref|YP_001035644.1| endonuclease III [Streptococcus sanguinis SK36]
gi|125498428|gb|ABN45094.1| Endonuclease III, putative [Streptococcus sanguinis SK36]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAMAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|323339826|ref|ZP_08080095.1| endonuclease III [Lactobacillus ruminis ATCC 25644]
gi|323092699|gb|EFZ35302.1| endonuclease III [Lactobacillus ruminis ATCC 25644]
Length = 213
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 125/210 (59%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++ +I ++P L + F +++++LSAQ+TDV+VNKAT LF+
Sbjct: 1 MLEKKQVSKILDTMKERFPKADTTLEKTDPFHFLLSIILSAQATDVSVNKATPALFKAYA 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + +++ YI+TIG+Y K++ ++ + L+ FD K+P+T E L L G+GR
Sbjct: 61 TPADLARADPSEVEKYIKTIGLYHNKAKYLVGCARDLVERFDGKVPKTREELMELTGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV L+ FGIP VDTH+ R++NR+ L P K ++E+ L+ + AH+
Sbjct: 121 KTANVELAECFGIPAFAVDTHVSRVANRLALVEPTKNVLEIERQLMEQVDESRWIEAHHL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GR+ C ARKP+C++C +S CK K+
Sbjct: 181 LIAWGRHQCLARKPKCETCPLSFECKYFKE 210
>gi|159486950|ref|XP_001701499.1| DNA repair glycosylase [Chlamydomonas reinhardtii]
gi|158271560|gb|EDO97376.1| DNA repair glycosylase [Chlamydomonas reinhardtii]
Length = 292
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 9/229 (3%)
Query: 2 VSSKKSDSYQGNSPLGCLYT---------PKELEEIFYLFSLKWPSPKGELYYVNHFTLI 52
++ + S + PL + + I + +P+P L + + F L+
Sbjct: 48 LAPTPTPSKKKLKPLPATPSFQAASLTALRAKAARIQAQLAQLYPNPPIPLTHASSFQLL 107
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
VAV+LSAQSTDV VN T LF + M + +++ IR +G+ K++N+ ++S
Sbjct: 108 VAVMLSAQSTDVKVNTVTPELFRRGPDAEAMAKLEASEIEGIIRVLGLAPTKAKNVRAMS 167
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
IL+ ++D ++P + EGL LPG+G K A+V++S AFG VDTHI R++ R GL+ G
Sbjct: 168 QILVEQYDGQVPGSWEGLEALPGVGHKTASVVMSQAFGHAAFPVDTHIHRLAQRWGLSNG 227
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
K+ + EQ L ++P +AH ++ GR C A++ +C I +
Sbjct: 228 KSVEQTEQDLKTLLPECTWRDAHLQIIYFGREHCPAQRHDATACPICSW 276
>gi|324994966|gb|EGC26879.1| endonuclease III [Streptococcus sanguinis SK678]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + N F L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNRFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 TPQDMAIASEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMEVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|162453330|ref|YP_001615697.1| putative endonuclease III [Sorangium cellulosum 'So ce 56']
gi|161163912|emb|CAN95217.1| putative endonuclease III [Sorangium cellulosum 'So ce 56']
Length = 208
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 106/203 (52%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ I + +P+P L + + ++L+VAV+LSAQ+TD VN L A
Sbjct: 1 MKRAEKAARIAEILDRLYPAPPIPLAHDDPYSLLVAVMLSAQTTDKMVNAVMPALLARAR 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A+ +++ IR IG K+ ++ +LS + E +P + E L LPG+G
Sbjct: 61 TPAAMAAVPTEEIAQLIRRIGFAPTKARHLKALSERIATEHGGVVPASFEALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG P VDTHI R++ R GL+ G+ + E+ L R PP+ H L
Sbjct: 121 KTASVVMAQAFGHPAFPVDTHIHRLAFRWGLSSGRDVVETERDLKRTFPPEQWNKLHLQL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNL 221
+ GR C A + C I +
Sbjct: 181 IYFGREHCPALRHDMTGCPICSW 203
>gi|324993721|gb|EGC25640.1| endonuclease III [Streptococcus sanguinis SK405]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMEVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|332359059|gb|EGJ36880.1| endonuclease III [Streptococcus sanguinis SK49]
Length = 209
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M GE + +I +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 TPQDMATAGEADIAKHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMEVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|34557443|ref|NP_907258.1| endonuclease III [Wolinella succinogenes DSM 1740]
gi|34483159|emb|CAE10158.1| ENDONUCLEASE III [Wolinella succinogenes]
Length = 215
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + +E I + F + K EL Y N + L+V+V+LSAQ TD VN T LFE
Sbjct: 1 MAKRPSKEAIETIRHRFLGHYKEAKTELLYRNAYELLVSVMLSAQCTDKRVNLITPALFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP+ + +++ I++ + K++N+I ++ ++ E +IP L LPG
Sbjct: 61 RFPTPESLALAEIDEVKKIIQSCSFFNNKAKNLILMAQKILQEHGGEIPLEQSLLMALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G+K ANV+L + VDTH+FR+S+R+GLA KTP + E+ L + K H
Sbjct: 121 VGQKTANVVLIEYLEKNLMAVDTHVFRVSHRLGLAKSKTPAQTEEELSKAF-KKDLSTLH 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
+VL GRY+CKA+KP C+ C ++ C+
Sbjct: 180 QAMVLFGRYLCKAQKPLCEECFLTEFCQ 207
>gi|219852559|ref|YP_002466991.1| endonuclease III [Methanosphaerula palustris E1-9c]
gi|219546818|gb|ACL17268.1| endonuclease III [Methanosphaerula palustris E1-9c]
Length = 212
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Query: 28 IFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
I+ + +P L + + F +++ +LSAQ+TD V+K LF TP + A
Sbjct: 9 IYDTLAEHYPDACTPLPFFHSPFQVLILTILSAQTTDQAVDKIRPALFARYPTPADLAAA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ I + G YR K+ +IIS + +L+N F IP T+E L LPG+GRK AN++L
Sbjct: 69 DVHEVEKIIHSTGFYRVKARHIISTAAMLVNRFGGTIPSTMEELLLLPGVGRKTANILLF 128
Query: 147 MAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
A GI I VDTH+ R++ R+GL + +EQ L+ + P + + ++ HGR
Sbjct: 129 HALGINAGIAVDTHVKRLAGRLGLTTRIEQDLIEQDLMNLYPQERWGDLTDIMIAHGRRC 188
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C A P C C +SN+C +Q
Sbjct: 189 CTAINPHCGVCPVSNVCPFYQQ 210
>gi|123966014|ref|YP_001011095.1| putative endonuclease [Prochlorococcus marinus str. MIT 9515]
gi|123200380|gb|ABM71988.1| putative endonuclease [Prochlorococcus marinus str. MIT 9515]
Length = 217
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 121/201 (60%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I + +PSP L + N FTL+VAV+LSAQSTD VN+ TK LF++AD
Sbjct: 1 MKKSERAEIILKELNKLYPSPPIPLDHTNAFTLLVAVVLSAQSTDKKVNELTKKLFKVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM+ +G K+ YI+ +G+ +KS+NI LS +++N+F+ ++P + E L LPG+G
Sbjct: 61 TPQKMVELGVSKIYEYIKQLGLSNQKSKNIYLLSKLIVNKFNYQVPNSFEDLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+VI+S F IP+ VDTHI R+S R GL G + E+ L + P H +
Sbjct: 121 KTASVIMSQVFNIPSFPVDTHIHRLSQRWGLTKGDNVRQTEKDLKNLFPISEWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR C++
Sbjct: 181 IFYGREFCTARGCDGTKCLMC 201
>gi|324991373|gb|EGC23306.1| endonuclease III [Streptococcus sanguinis SK353]
Length = 209
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRTELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|262283109|ref|ZP_06060876.1| endonuclease III [Streptococcus sp. 2_1_36FAA]
gi|262261361|gb|EEY80060.1| endonuclease III [Streptococcus sp. 2_1_36FAA]
Length = 209
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRTELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|254796630|ref|YP_003081466.1| endonuclease III [Neorickettsia risticii str. Illinois]
gi|254589867|gb|ACT69229.1| endonuclease III [Neorickettsia risticii str. Illinois]
Length = 216
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 107/196 (54%), Positives = 134/196 (68%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EI F + P PK EL Y+N FTLI+AVLLSAQSTDV+VNK TK LF +A P+ +
Sbjct: 14 EILERFQRQMPEPKIELKYINKFTLIIAVLLSAQSTDVSVNKVTKALFRVAYEPEHYAKM 73
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
KL+ YI+TIG+Y K++NII+L+ LI++ IP + L LPGIGRK ANVIL
Sbjct: 74 DLAKLKEYIKTIGLYNNKAKNIIALAKKLISDKQTDIPNNFQYLQSLPGIGRKSANVILC 133
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
FG I VDTH+FR+SNRIGL + +VE+ LL IP AH WLVLHGRYVC
Sbjct: 134 TLFGEKRIAVDTHVFRVSNRIGLVHARNVLEVEKQLLESIPQTFLPQAHLWLVLHGRYVC 193
Query: 207 KARKPQCQSCIISNLC 222
KAR+P+C++CII +LC
Sbjct: 194 KARRPECENCIIKDLC 209
>gi|149183171|ref|ZP_01861619.1| endonuclease III [Bacillus sp. SG-1]
gi|148849106|gb|EDL63308.1| endonuclease III [Bacillus sp. SG-1]
Length = 216
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 137/210 (65%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++E +P EL + N F L++AVLLSAQ TDV VNK TK LFE
Sbjct: 1 MLNKNQIEYCLTEMEQMFPDAHCELNHRNPFDLVIAVLLSAQCTDVLVNKVTKTLFEKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI SL +L+ E+ ++PQ+ + L +LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIRSLCELLLEEYGGEVPQSRDELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG P + VDTH+ R+S R+G+ + +VE++L+R IP + + H+
Sbjct: 121 KTANVVVSVAFGEPALAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKIPREKWTDTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ PQC+ C + +LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPQCEICPLLHLCREGQK 210
>gi|317502642|ref|ZP_07960762.1| endonuclease III [Prevotella salivae DSM 15606]
gi|315666261|gb|EFV05808.1| endonuclease III [Prevotella salivae DSM 15606]
Length = 229
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F K EL + + F LIVA LLSAQ TD +N T LF
Sbjct: 1 MTRKERFDYILNYFRQKQGPVTTELDFGSAFQLIVATLLSAQCTDKRINMITPELFRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + M + + I+++ K+ ++ +S IL+ F+ K+P E LT+LPG+GR
Sbjct: 61 TAEAMAKANWEDIFELIKSVSYPNAKAHHLSEMSKILVERFNGKVPDNTEELTQLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ S+ FG PT+ VDTH++R+S+R+ L P TP KVE LL+ IP NAH+
Sbjct: 121 KTANVVQSVWFGKPTLAVDTHVYRVSHRLSLVPEAANTPLKVELELLKHIPEADVSNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRYVCK++KPQC C + +C
Sbjct: 181 WLLLHGRYVCKSQKPQCDDCPFNTICP 207
>gi|302671440|ref|YP_003831400.1| endonuclease III Nth [Butyrivibrio proteoclasticus B316]
gi|302395913|gb|ADL34818.1| endonuclease III Nth [Butyrivibrio proteoclasticus B316]
Length = 217
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K E+ ++P L Y + L+V+V L+AQ TD V+ T L+E
Sbjct: 1 MTKKKLALEVIKRLKKEYPDAVCTLAYDKAWQLLVSVRLAAQCTDKRVDMITPLLYEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + ++++ +R G+ K+ +I + +L +E+ K+P ++E L +LPG+GR
Sbjct: 61 TLEALADAPVERIEEIVRPCGLGNSKARDISACMKMLRDEYGGKVPDSMEELLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L +G P I DTH R+ N IGL P KVE+ L +++PP+ +
Sbjct: 121 KSANLVLGDVYGKPAIVTDTHCIRLCNLIGLVDNIKEPAKVEKELWKLVPPEEGNALCHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
V HGR VC AR+P C C + ++CK
Sbjct: 181 FVTHGREVCVARRPDCDRCCLKDICK 206
>gi|270292997|ref|ZP_06199208.1| endonuclease III [Streptococcus sp. M143]
gi|270278976|gb|EFA24822.1| endonuclease III [Streptococcus sp. M143]
Length = 209
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ +YI +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ +AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEKWLSAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|332358814|gb|EGJ36637.1| endonuclease III [Streptococcus sanguinis SK355]
Length = 209
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPIEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|254432679|ref|ZP_05046382.1| endonuclease III [Cyanobium sp. PCC 7001]
gi|197627132|gb|EDY39691.1| endonuclease III [Cyanobium sp. PCC 7001]
Length = 221
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ +I +P L++ + L++A +LSAQ TD VN+ T LFE
Sbjct: 8 RQRAPQILERLGALYPEATCSLHWRTPYELLIATMLSAQCTDERVNRITPALFERFPDAA 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
A+ ++++ Y+++ G +R K++ I+ S +L+ ++P+++E L +LPG+ RK A
Sbjct: 68 AAAAVEPEEVEPYVKSAGFFRNKAKAIVGASRLLLERHGGEVPRSMEELLQLPGVARKTA 127
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+V+L+ +GI + VDTH+ R++ R+ L+ P ++E L++++P + L+
Sbjct: 128 SVVLAWCYGINAGVTVDTHVSRLAQRLRLSRHSEPRRIEPDLMKLVPREQWQTLSIRLIF 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC ARKP C +C +++LC
Sbjct: 188 HGRAVCAARKPLCAACSLADLCPS 211
>gi|163788317|ref|ZP_02182763.1| endonuclease III [Flavobacteriales bacterium ALC-1]
gi|159876637|gb|EDP70695.1| endonuclease III [Flavobacteriales bacterium ALC-1]
Length = 218
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P L + + +TL++AVL+SAQSTDV VN+ T LFE AD
Sbjct: 1 MTKKEKVDFVINTLDKLYPEIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ I+ +G+ KS+ I LSHILI++ + K+PQT + L LP +G
Sbjct: 61 NPYDMIKLSVEEIREIIKPVGLSPMKSKGIYGLSHILIDKHNGKVPQTYDELEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V+LS AFGIP VDTHI R+ R L GK + E+ R+ P + + H +
Sbjct: 121 KTAAVVLSQAFGIPAFPVDTHIHRLMYRWNLTNGKNVVQTEKDAKRLFPKELWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|154686481|ref|YP_001421642.1| hypothetical protein RBAM_020490 [Bacillus amyloliquefaciens FZB42]
gi|154352332|gb|ABS74411.1| Nth [Bacillus amyloliquefaciens FZB42]
Length = 219
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K++E +P + EL + N F L+VAV LSAQ TD VN+ TK LF+
Sbjct: 1 MLNLKQIEYCLEKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++LQ I++IG+YR K++NI LS ++I E+ ++P+ + L LPG+GR
Sbjct: 61 RPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEEYGGEVPKDRDELVNLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFG+P I VDTH+ R+S R+G+ + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPKEDWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P+C C + LC+ ++
Sbjct: 181 LIFFGRYHCKAQSPRCAECPLLPLCREGQK 210
>gi|160937835|ref|ZP_02085194.1| hypothetical protein CLOBOL_02727 [Clostridium bolteae ATCC
BAA-613]
gi|158439274|gb|EDP17027.1| hypothetical protein CLOBOL_02727 [Clostridium bolteae ATCC
BAA-613]
Length = 273
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDV 64
K+ + I + ++ + L + + L++AV++SAQ TD
Sbjct: 51 KTQGRPKAVRETKAELAARIARILDVLDREYGTEYRCYLNHETPWQLLIAVIMSAQCTDA 110
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
VN T LF+ DT +K A K+L+ I +IG Y K++NII+ L+ F ++P
Sbjct: 111 RVNIVTADLFQKYDTLEKFAAADLKELEQDIHSIGFYHMKAKNIIACCRDLVERFGGEVP 170
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
+T+E LT L G+GRK ANVI + P+I VDTH+ RIS ++GL + P K+E L++
Sbjct: 171 RTIEELTSLAGVGRKTANVIRGNIYNEPSIVVDTHVKRISRKLGLTKEEEPEKIEYDLMK 230
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++P H + ++ GR +C AR+P+C C + C
Sbjct: 231 VLPKDHWILWNIHIITLGRTICIARRPKCCECFLREECP 269
>gi|16801074|ref|NP_471342.1| endonuclease III (DNA repair) [Listeria innocua Clip11262]
gi|16414509|emb|CAC97238.1| probable endonuclease III (DNA repair) [Listeria innocua Clip11262]
gi|313623177|gb|EFR93437.1| endonuclease III [Listeria innocua FSL J1-023]
Length = 219
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELIHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 RPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSAKILAEFNGEVPRTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|325690667|gb|EGD32668.1| endonuclease III [Streptococcus sanguinis SK115]
gi|327470502|gb|EGF15958.1| endonuclease III [Streptococcus sanguinis SK330]
Length = 209
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|319949584|ref|ZP_08023629.1| endonuclease III [Dietzia cinnamea P4]
gi|319436760|gb|EFV91835.1| endonuclease III [Dietzia cinnamea P4]
Length = 244
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 101/192 (52%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+P EL + L VA +LSAQ TD VN+ T LF T ++L+
Sbjct: 19 EEAFPHVYCELDFTTPLELSVATILSAQCTDKRVNEVTPALFRRYRTAADYAGSDREELE 78
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
IR G YR K+ +I L L+ +D ++PQ LE L LPG GRK ANV+L AFGIP
Sbjct: 79 ELIRPTGFYRNKARSIQGLGAALVERYDGEVPQRLEDLVTLPGFGRKTANVVLGNAFGIP 138
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ VDTH R+ NR ++E+ + +++P +A + ++ HGR VC AR
Sbjct: 139 GLPVDTHFIRLVNRWKWTDATDAVRIEREVSQMLPRTSWTDASHRIIFHGRRVCHARTAA 198
Query: 213 CQSCIISNLCKR 224
C +C++++ C
Sbjct: 199 CGACVLADDCPS 210
>gi|317968676|ref|ZP_07970066.1| endonuclease III [Synechococcus sp. CB0205]
Length = 217
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 106/201 (52%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I +P L + + FTL++AVLLSAQ TD VN+ T LF
Sbjct: 1 MRKQERAALIMQRLEEHYPETPVPLDHSDPFTLLIAVLLSAQCTDKKVNEVTPALFAAGA 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A+ E ++ +IR +G+ + K+ N+ L+ +L+ ++P + L LPG+G
Sbjct: 61 TPQAMAALPESEILGHIRQLGLAKTKARNVKRLAELLLERHGGEVPASFSALEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P VDTHI R++ R GL+ G + E L R+ P H +
Sbjct: 121 KTASVVMAQAFGVPAFPVDTHIHRLAQRWGLSSGVSVACTETDLKRLFPKDAWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ +GR C AR + C +
Sbjct: 181 IFYGREFCTARGCDGRVCPLC 201
>gi|325696282|gb|EGD38173.1| endonuclease III [Streptococcus sanguinis SK160]
Length = 209
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + N F L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNRFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 TPQDMAIASEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|157150568|ref|YP_001450812.1| endonuclease III [Streptococcus gordonii str. Challis substr. CH1]
gi|157075362|gb|ABV10045.1| endonuclease III [Streptococcus gordonii str. Challis substr. CH1]
Length = 209
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 TPQDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|167947321|ref|ZP_02534395.1| endonuclease III [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 211
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 100/205 (48%), Positives = 139/205 (67%), Gaps = 1/205 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPK-GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ IF + P P L HF L++AV+LSAQ+TD VNKAT LF +A+
Sbjct: 1 MNQEKRRHIFEQAAASQPQPPPRNLTTARHFELLIAVILSAQATDKGVNKATARLFPVAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP +L +GE L+ YI+TIG++ K++NII+ +L+ ++P+ + L LPG+GR
Sbjct: 61 TPAGILELGETGLKEYIKTIGLFNSKAKNIIAACRMLLEHHGGEVPEQRKALEALPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AFG PT+ VDTHIFR+ NR LAPGKTP +VE+ LLR IP + +AH+WL
Sbjct: 121 KTANVVLNTAFGHPTMAVDTHIFRVGNRTRLAPGKTPLEVEKKLLRWIPQEFLQDAHHWL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+LHGRY C ARKP+C SC+I +LC+
Sbjct: 181 ILHGRYTCVARKPRCGSCVIEDLCE 205
>gi|256372233|ref|YP_003110057.1| endonuclease III [Acidimicrobium ferrooxidans DSM 10331]
gi|256008817|gb|ACU54384.1| endonuclease III [Acidimicrobium ferrooxidans DSM 10331]
Length = 216
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 23 KELEEIFYLFSLKWPSPK---GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +P L + F L+VA +LSAQ+TD VN T LF
Sbjct: 6 RRALAVDERLEELYPGTAVSLCALRFETPFQLLVATVLSAQTTDAAVNLVTPGLFARYPD 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++++ +R G YR K+ +I++L+ ++ F ++PQ LE LT LPG+GRK
Sbjct: 66 AETLARAPIEQVEALVRPTGFYRTKARHIVALAAAIVERFGGEVPQGLEELTSLPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+ S+ F +P + VDTH+ R+S R+G+A TP +EQ L ++ PK ++
Sbjct: 126 TANVVRSVGFSLPGLPVDTHVKRVSRRLGIARSSTPEGIEQELCAVLAPKRWGTFSLRMI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
LHGR C AR+P C C +++LC+ +
Sbjct: 186 LHGRETCTARRPLCAGCRLADLCEAHR 212
>gi|325687048|gb|EGD29071.1| endonuclease III [Streptococcus sanguinis SK72]
Length = 209
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPRDMATAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|153811234|ref|ZP_01963902.1| hypothetical protein RUMOBE_01626 [Ruminococcus obeum ATCC 29174]
gi|149832732|gb|EDM87816.1| hypothetical protein RUMOBE_01626 [Ruminococcus obeum ATCC 29174]
Length = 210
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V+V L+AQ TD VN + L+
Sbjct: 1 MKKEELALEVIARLKKEYPDAGCTLDYDQAWKLLVSVRLAAQCTDARVNVVVEELYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A ++++ +R G+ R K+ +I + IL ++D+ IP T E L +LPG+GR
Sbjct: 61 DVASLAAAEPEEIEEIVRPCGLGRSKARDISACMRILHEQYDDNIPTTFEALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL G P KVE +L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDGIKEPKKVEMALWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLC 222
LV HGR VC AR KP C C + ++C
Sbjct: 181 LVYHGREVCTARTKPYCDRCCLEDIC 206
>gi|42780750|ref|NP_977997.1| endonuclease III [Bacillus cereus ATCC 10987]
gi|42736670|gb|AAS40605.1| endonuclease III [Bacillus cereus ATCC 10987]
Length = 215
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGKVPEDRDELTNLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|327462085|gb|EGF08414.1| endonuclease III [Streptococcus sanguinis SK1057]
Length = 209
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAVAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|332367235|gb|EGJ44970.1| endonuclease III [Streptococcus sanguinis SK1059]
Length = 209
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ M GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQDMAKAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|88602341|ref|YP_502519.1| endonuclease III [Methanospirillum hungatei JF-1]
gi|88187803|gb|ABD40800.1| DNA-(apurinic or apyrimidinic site) lyase [Methanospirillum
hungatei JF-1]
Length = 215
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 4/201 (1%)
Query: 28 IFYLFSLKWP--SPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I ++ + + E L++ N + ++A +LSAQ+TD VN T+ LF +
Sbjct: 9 ILSRLRSRYDLLNSRDEFLHFKNPYETLIATILSAQTTDRCVNMVTRELFMKYPDVAALS 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++ I G +R K+ NII+ S +++ EFD ++P ++ L RLPG+GRK AN++
Sbjct: 69 EAPVQDVEKLIHPTGFFRTKARNIIAASQMVMKEFDGRVPDEMDDLVRLPGVGRKTANIV 128
Query: 145 LSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
L AF I VDTH+ R+S R+GL P+++E L+R+ P + + +LHGR
Sbjct: 129 LDHAFSKTVGIAVDTHVRRVSMRLGLTDESDPDRIEMDLVRVFPKEFWAEINGLFILHGR 188
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VC AR P C +C +++LC+
Sbjct: 189 RVCTARHPACDNCNLADLCRY 209
>gi|154498127|ref|ZP_02036505.1| hypothetical protein BACCAP_02108 [Bacteroides capillosus ATCC
29799]
gi|150273117|gb|EDN00274.1| hypothetical protein BACCAP_02108 [Bacteroides capillosus ATCC
29799]
Length = 212
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +++ I +P L Y L+ A L+AQ TD VNK T L+
Sbjct: 1 MKSEQDILAIVEELKKLYPEAICSLDYQKPHELLFATRLAAQCTDERVNKVTPGLYGRFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + +++ I + G +R K+ +I++ S +L++E+ +P T+E L RLPG+GR
Sbjct: 61 TLEALANADISEVEELIHSTGFFRAKARDIVAASRMLLDEYGGVVPDTMEDLLRLPGVGR 120
Query: 139 KGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHY 196
K AN+IL + P + DTH R+S R+GL G K P KVE L +++PP+ + +
Sbjct: 121 KTANLILGDVYRKPGVVVADTHCIRLSGRLGLTDGTKDPAKVETQLRQVLPPEESNDFCH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
LVLHGR VC AR P+C +C + C
Sbjct: 181 RLVLHGRAVCMARGPECANCTLRPWCDFY 209
>gi|24380028|ref|NP_721983.1| putative endonuclease III (DNA repair) [Streptococcus mutans UA159]
gi|24378018|gb|AAN59289.1|AE014995_6 putative endonuclease III (DNA repair) [Streptococcus mutans UA159]
Length = 207
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P L + NHF L++AV+LSAQ+TD VNK T LF
Sbjct: 2 VLSKKHARKVLEEIIALYPDAVPSLNFKNHFELLIAVILSAQTTDAAVNKVTPALFAAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + K L++YI IG+YR K++ + S L+ ++ +IPQT + L L G+GR
Sbjct: 62 RPKDLAKADLKDLESYISQIGLYRNKAKFLKGCSQQLVEHYNGQIPQTRKELESLSGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FG+P VDTH+ RI + +P +VE+ + ++PP+ AH
Sbjct: 122 KTANVVMSVGFGLPAFAVDTHVSRICKHHNIVKQTASPLEVEKRVTEVLPPEEWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
L+ GR VC + P+CQ
Sbjct: 182 LIYFGREVCHPKNPECQK 199
>gi|162452188|ref|YP_001614555.1| endonuclease III [Sorangium cellulosum 'So ce 56']
gi|161162770|emb|CAN94075.1| endonuclease III [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
F P EL + + F L+VA +LSAQ+TDV VNK T HLF + + +
Sbjct: 36 FARLRALHPDAHCELDHRSSFELLVATVLSAQTTDVLVNKVTPHLFGAYPDARALASADA 95
Query: 89 KKLQNYIRT--IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ ++ +G++ +K +NI+ L+ LI ++P+TL L +LPG+GRK ANV+L
Sbjct: 96 AEVGALLKRLGMGMFNQKGKNIVGLARGLIERHGGEVPRTLAELVKLPGVGRKTANVVLG 155
Query: 147 MAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+AFG P + VDTH+ R+S R+G P ++E+ L+ + P + + L+ HGR +
Sbjct: 156 VAFGAPEGVVVDTHVQRLSQRLGWTTSDKPEQIERDLVALFPRRDWDMLSHTLIFHGRRI 215
Query: 206 CKARKPQCQSCIISNLCKR 224
C ARKP C C IS+ C
Sbjct: 216 CFARKPACGGCGISDACPS 234
>gi|218459700|ref|ZP_03499791.1| endonuclease III protein [Rhizobium etli Kim 5]
Length = 236
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 116/200 (58%), Positives = 159/200 (79%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + + Y+ E EEIF FS++ P P+GEL + N FTL+VAV LSAQ+TD VNKA
Sbjct: 37 RKPAAAVKTAYSVAEREEIFRRFSVQRPEPRGELEHTNPFTLVVAVALSAQATDAGVNKA 96
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T+ LF++ADTPQKML +GE+K+++YI+TIG+YR K++N+I+LS L++EF K+P+T E
Sbjct: 97 TRALFKVADTPQKMLELGEEKVRDYIKTIGLYRNKAKNVIALSQTLVDEFAGKVPETREE 156
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L RLPG+GRK ANV+LSMAFG T+ VDTHIFRI+NRI LAPGKTP+++E L++++P
Sbjct: 157 LVRLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRIKLAPGKTPDEIEARLMKVVPKH 216
Query: 190 HQYNAHYWLVLHGRYVCKAR 209
+ Y+AH+WL+LHGRY CKAR
Sbjct: 217 YLYHAHHWLILHGRYTCKAR 236
>gi|310779540|ref|YP_003967873.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Ilyobacter polytropus DSM 2926]
gi|309748863|gb|ADO83525.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Ilyobacter polytropus DSM 2926]
Length = 219
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ K+ P L Y F L+VAV+LSAQ TDV VN T+ +F++ +TP+ + + K +
Sbjct: 14 LNEKFGKPHCALNYNTDFELLVAVILSAQCTDVRVNMVTEKMFKVVNTPEAFMEMPLKDI 73
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG- 150
+ +I++ G +R K++NI S L+ +++ ++P +E L LPG+GRK ANV+ +G
Sbjct: 74 ETHIKSTGFFRNKAKNIKMCSKELVEKYNGEVPSKMENLVALPGVGRKTANVVRGEIWGL 133
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
I VDTH+ R+SN IG + K+E+ L+ I+P K + ++L+L GR VC AR+
Sbjct: 134 SDGITVDTHVKRLSNLIGFVKEENVEKIERELMEIVPKKRWIDFSHYLILQGRDVCIARR 193
Query: 211 PQCQSCIISNLCKRIKQ 227
P+C +C I++LC ++
Sbjct: 194 PKCSACEINHLCNYGRK 210
>gi|283768320|ref|ZP_06341232.1| endonuclease III [Bulleidia extructa W1219]
gi|283104712|gb|EFC06084.1| endonuclease III [Bulleidia extructa W1219]
Length = 213
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I +P KGEL N + L +AV+LSAQSTDV+VN+ T LFE + +
Sbjct: 6 ALNIVEELEKLFPDAKGELNARNTYELSIAVILSAQSTDVSVNQVTPALFEAYPNLESLA 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++++YI +G+YR K+ NII + +++ F +IP ++E LT LPG+GRK ANVI
Sbjct: 66 NAKAREVESYIARLGLYRAKAANIIGFAKGVVDRFHGEIPSSMEDLTSLPGVGRKCANVI 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVLHGR 203
F +P++ VDTH+ RI+ R+GL K + +E+ L + +P + AH+ ++ GR
Sbjct: 126 QGECFHLPSLAVDTHVSRIAKRLGLVYQKDSVEVIERKLKKKLPKERWTKAHHQMIFFGR 185
Query: 204 YVCKARKPQCQSCIISNLC 222
Y+C+ARKPQC C C
Sbjct: 186 YLCQARKPQCYRCPFVEHC 204
>gi|307719736|ref|YP_003875268.1| endonuclease III [Spirochaeta thermophila DSM 6192]
gi|306533461|gb|ADN02995.1| endonuclease III [Spirochaeta thermophila DSM 6192]
Length = 238
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 111/204 (54%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K E ++ + ++P + + F L+V V+LSAQSTD VN LF TP
Sbjct: 4 RRKRFERLYGILEEEYPDTSSFISFAEPFQLLVGVILSAQSTDRQVNLILPELFARFPTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++++ +R++G +R K+ NI + ++ + ++P+ +E L LPG+GRK
Sbjct: 64 GDLAEAPVEEIEALVRSVGFFRMKARNIKETARLVHERWGGRVPERMEDLLLLPGVGRKS 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI +G P I VDTH R+ R+GL +P ++E+ L IPP+ QY +
Sbjct: 124 ANVIRGTIYGRPAIIVDTHFGRVVRRLGLTEEHSPERIERDLASWIPPEKQYPFSMRVNR 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR VC AR+P C SC ++ C R
Sbjct: 184 HGRAVCTARRPACASCRLAPFCPR 207
>gi|110667504|ref|YP_657315.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
gi|109625251|emb|CAJ51673.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
Length = 228
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++++ + + ++P L + N L++AV+LSAQ TD VN T LFE +T
Sbjct: 8 RTQQVDTVLRRLAERYPDSTISLQFSNRLELLIAVVLSAQCTDERVNSITADLFEKYETA 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
A +L I I + K+ + S+ L ++D +P T++ LT L G+GRK
Sbjct: 68 TDYAAADTDELAEDIYGITFHNNKAGYLKSIGETLAADYDGDVPDTMDELTALSGVGRKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L + I VDTH+ RI+ R+GL +TP ++E L+ +P + +
Sbjct: 128 ANVVLQHGHDVVEGIVVDTHVQRITRRLGLTDEQTPKQIETDLMESVPESEWQQFTHLFI 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR C A+ P C CI+ ++C K
Sbjct: 188 SHGRETCTAQNPDCTDCILESVCPSSK 214
>gi|298243344|ref|ZP_06967151.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
gi|297556398|gb|EFH90262.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
Length = 222
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++++ I +P + +L + L VA L+AQ TD VN TK LF+ +
Sbjct: 15 EQVQAIIDELYRLYPEARYDLDFTTPLELFVATQLAAQCTDERVNAVTKTLFQKYRSAAD 74
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+++L+ I+ G YRKK+ + L++ + ++P T+ L R+PGI RK AN
Sbjct: 75 YAGANQEELEQDIKPTGFYRKKANQLRVSCQYLLDHYGGEVPGTMAELVRIPGIARKTAN 134
Query: 143 VILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
VIL AFG+ VDTH+ R+S R G + K+E+ L+ ++P +H + ++ H
Sbjct: 135 VILGNAFGVVDGFIVDTHVDRLSKRFGWSKQNDIVKIERDLMALVPREHWLEVAHRIIYH 194
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GR VC ARKP C C +++ C
Sbjct: 195 GRAVCNARKPLCAQCTLASYCPS 217
>gi|257066254|ref|YP_003152510.1| endonuclease III [Anaerococcus prevotii DSM 20548]
gi|256798134|gb|ACV28789.1| endonuclease III [Anaerococcus prevotii DSM 20548]
Length = 197
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 35 KWPSPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
+P L + F L++A +LSAQSTDV VNK T +F+ +T ++ K ++N
Sbjct: 1 MYPDVDYSMLNFTTPFELLIATILSAQSTDVRVNKVTSVMFKDMNTAEEFAKADIKTIEN 60
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
YIRT+GIY+ K++NI + S IL ++++ ++P ++ L +LPG+GRK ANV+ S AF IP
Sbjct: 61 YIRTVGIYKNKAKNISATSKILCSDYNGEVPADIKELMKLPGVGRKTANVVASNAFNIPA 120
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
I VDTH+FR+SNR+GLA K K E+ L+ IP + H+ L+ HGR +CKAR P C
Sbjct: 121 IAVDTHVFRVSNRLGLADAKNVEKTEKQLMENIPKERWRKTHHQLITHGRALCKARGPIC 180
Query: 214 QSCIISNLCKRIKQ 227
+ C ++ +C+ ++
Sbjct: 181 EECDLNVVCEFYRR 194
>gi|313608036|gb|EFR84123.1| endonuclease III [Listeria monocytogenes FSL F2-208]
Length = 219
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P +AH++
Sbjct: 121 KTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKVLWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKAR P+C +C + LC+ K+
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGKK 210
>gi|71892150|ref|YP_277882.1| endonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796256|gb|AAZ41007.1| endonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 213
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 93/208 (44%), Positives = 134/208 (64%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +I P EL Y + F L++AVLLSAQ++DV VNK T LF++ +T
Sbjct: 1 MNRVKRYQILCKLRDNNIRPVIELVYRSEFELLIAVLLSAQTSDVQVNKVTTSLFKVVNT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ ML +G ++NYI++IG+ KS+NII +LI++++ +P GL LPG+GRK
Sbjct: 61 PQDMLRLGVDGVKNYIKSIGLSNIKSKNIIETCRLLIDKYNGILPSNRVGLESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+IL++ F PTI VDTH+FR NR A G T VE+ LL ++P + Q N H WLV
Sbjct: 121 TANIILNVVFDWPTIAVDTHVFRFCNRSRFALGNTVLSVEKKLLSVVPKEFQRNCHQWLV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGR+VC+AR+P C+ C+I +LC+ ++
Sbjct: 181 LHGRHVCRARQPNCRVCVIKDLCEFKEK 208
>gi|262277783|ref|ZP_06055576.1| endonuclease III [alpha proteobacterium HIMB114]
gi|262224886|gb|EEY75345.1| endonuclease III [alpha proteobacterium HIMB114]
Length = 219
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + I + +P L + N+FTL+++VLLSAQ TD+NVN TK ++ + P
Sbjct: 5 KKDKAKIILKELNKLYPKTPSPLTHTNNFTLLISVLLSAQCTDLNVNNVTKDIYPKYNKP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +G+KK++ I+ IG++R KS+++ LS IL+++ K+P+T E L LPG+G K
Sbjct: 65 EHFVKLGQKKIEKLIQKIGLFRMKSKSVYRLSKILLDKHGGKVPKTFEELEALPGVGHKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+V++S FG P VDTHI R++ R GL GK + E+ L + P KH H ++
Sbjct: 125 ASVVMSQGFGYPAFPVDTHIHRLAQRWGLTNGKNVVQTEKDLKELFPKKHWNKLHLQIIF 184
Query: 201 HGRYVCKARKPQCQSCIISNLC-KRIKQ 227
+GR CKAR C I C + K+
Sbjct: 185 YGREYCKARDCFGLECKICTQCNPKRKK 212
>gi|227873069|ref|ZP_03991363.1| DNA-(apurinic or apyrimidinic site) lyase [Oribacterium sinus
F0268]
gi|227841050|gb|EEJ51386.1| DNA-(apurinic or apyrimidinic site) lyase [Oribacterium sinus
F0268]
Length = 250
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ EI + P L N + L+ A +LSAQ TD VN T+ LF Q
Sbjct: 14 RVREIMKRLDAHYGDRPMIFLEAENAWQLLFATILSAQCTDARVNMVTEKLFVKYKDLQA 73
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ K+L+ I + G Y K++N+ + + L+ E+ ++P+ +E LT LPG+GRK N
Sbjct: 74 FVDCDLKELEEDIHSTGFYHNKAKNMKACAKALVEEYGGEVPRNIEALTGLPGVGRKTGN 133
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+IL + IP+I VDTH+ RISNR+GLA P KVE L+ +P + + ++ G
Sbjct: 134 LILGNIYHIPSIVVDTHVKRISNRLGLADSPDPTKVEFQLMEHLPEEFWIRWNTHIIALG 193
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
R +C ++ P+C C + +LC K+
Sbjct: 194 RTLCTSQNPKCGECYLQDLCPSSKK 218
>gi|124515301|gb|EAY56811.1| Endonuclease III/Nth [Leptospirillum rubarum]
Length = 241
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 122/225 (54%), Gaps = 3/225 (1%)
Query: 3 SSKKSDSYQGNSPLGCLY---TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+ KK D+ Q S P L E+ L S P P+ EL N F L+VA +LSA
Sbjct: 6 TRKKPDTKQPGSGASLPPVPGKPAPLGEVLALLSESIPDPRMELDARNPFELLVATVLSA 65
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
QSTD VN T LF P + + ++ IR+ G + +K+ I+ L+ L+ +
Sbjct: 66 QSTDRMVNSVTPALFARFPDPPSLQEADPETVEGLIRSTGFFHRKALQIVRLAKELVRRY 125
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
++P +E L LPG+GRK A+VIL+ F +P I VDTH+ R+S R+G P +E
Sbjct: 126 QGEVPSRMEDLLTLPGVGRKTASVILAHGFHLPAIPVDTHVTRVSLRLGFTVSHDPEVIE 185
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L R++ K + L+LHGRYVC ARKP C +C++S +C
Sbjct: 186 EDLKRLMDEKDWISGSSRLLLHGRYVCLARKPLCSNCVLSGVCPS 230
>gi|290579993|ref|YP_003484385.1| putative endonuclease III [Streptococcus mutans NN2025]
gi|254996892|dbj|BAH87493.1| putative endonuclease III [Streptococcus mutans NN2025]
Length = 207
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P L + NHF L++AV+LSAQ+TD VNK T LF
Sbjct: 2 VLSKKHARKVLEEIIALYPDAVPSLNFKNHFELLIAVILSAQTTDAAVNKVTPALFAAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + K L++YI IG+YR K++ + S L+ ++ ++PQT + L L G+GR
Sbjct: 62 RPKDLAKADLKDLESYISQIGLYRNKAKFLKECSQQLVEHYNGQVPQTRKELESLSGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FG+P VDTH+ RI + +P +VE+ + ++PP+ AH
Sbjct: 122 KTANVVMSVGFGLPAFAVDTHVSRICKHHNIVKQTASPLEVEKRVTEVLPPEEWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
L+ GR VC + P+CQ
Sbjct: 182 LIYFGREVCHPKNPECQK 199
>gi|171913023|ref|ZP_02928493.1| endonuclease III [Verrucomicrobium spinosum DSM 4136]
Length = 217
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 113/202 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + +P P L + + +TL+VAVLLSAQ TD VN T HLF +AD
Sbjct: 1 MTKKQRADHVLVRLAELYPDPPIPLDHKDPYTLLVAVLLSAQCTDARVNLVTPHLFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ M + +K+ ++ G+ +K++ I LS I++ E K+P TL+ L +LPG+G
Sbjct: 61 APEGMAEVPVEKILGIVKPCGLGPQKAKAISELSKIIVREHSGKVPDTLDALEKLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V+L+ AFG+P+ VDTHI R++ R GL G + + E+ L + P H +
Sbjct: 121 KTAQVVLAQAFGVPSFPVDTHIHRLAQRWGLTSGSSVTQTERDLKGLFPVSSWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR SC++
Sbjct: 181 IYYGREHCSARACDGLSCMLCT 202
>gi|327474595|gb|EGF20000.1| endonuclease III [Streptococcus sanguinis SK408]
gi|328946599|gb|EGG40737.1| endonuclease III [Streptococcus sanguinis SK1087]
Length = 209
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M A GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 TPHDMAAAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|194467585|ref|ZP_03073572.1| endonuclease III [Lactobacillus reuteri 100-23]
gi|194454621|gb|EDX43518.1| endonuclease III [Lactobacillus reuteri 100-23]
Length = 213
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +P E+ + +P L ++ ++A +LSAQSTD +VN+ T LF
Sbjct: 1 MLSPDEIRYSIKVMRQTFPEAGTTLIADTNYHFLLATILSAQSTDQSVNEITPALFARFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + + +++ YI+ +G+YR K++ ++ S ++ +F+ ++P TL+ L L G+GR
Sbjct: 61 LPADLAGVEPAEVEPYIKRLGLYRNKAKFLVKTSQQIVTDFNGEVPHTLKELMTLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ F IP VDTH+ R++ R+ + K + +E+ L++ IPP+H +AH+
Sbjct: 121 KVADVVLAECFNIPAFPVDTHVSRVARRLRMVEPKASVLTIEKKLMKTIPPEHWLDAHHS 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ GRYVC AR P+CQ+C + LC
Sbjct: 181 MIFWGRYVCTARNPKCQTCPLLPLC 205
>gi|47566011|ref|ZP_00237049.1| endonuclease III [Bacillus cereus G9241]
gi|229155212|ref|ZP_04283324.1| endonuclease III [Bacillus cereus ATCC 4342]
gi|47556928|gb|EAL15258.1| endonuclease III [Bacillus cereus G9241]
gi|228628339|gb|EEK85054.1| endonuclease III [Bacillus cereus ATCC 4342]
Length = 215
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|322387499|ref|ZP_08061109.1| endonuclease III [Streptococcus infantis ATCC 700779]
gi|321142028|gb|EFX37523.1| endonuclease III [Streptococcus infantis ATCC 700779]
Length = 209
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 116/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E + +I +G+YR K++ + + L+++FD+++PQT E L L G+GR
Sbjct: 62 TPQAMADASESDIAKHISRLGLYRNKAKFLKKCAQQLLDDFDSQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEKWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|229029328|ref|ZP_04185416.1| endonuclease III [Bacillus cereus AH1271]
gi|228731987|gb|EEL82881.1| endonuclease III [Bacillus cereus AH1271]
Length = 215
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L++++D K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYDGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+A+GIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAYGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|119477098|ref|ZP_01617334.1| endonuclease III [marine gamma proteobacterium HTCC2143]
gi|119449461|gb|EAW30699.1| endonuclease III [marine gamma proteobacterium HTCC2143]
Length = 217
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 115/204 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E I +P+ L + + +TL++AVLLSAQ TD VN T LF +AD
Sbjct: 1 MLKQARVEFILRKLQHLYPTQLIPLDHKDPYTLLIAVLLSAQCTDARVNTVTPALFTLAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P +M + +++ IR G+ +KS+ I +LS +L+ +++ ++P+ + L LPG+G
Sbjct: 61 NPAEMATKTVEAIRSIIRPCGLSPQKSKAIKNLSILLMEKYNGEVPEDMAALEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG PT VDTHI R++ R GL GK + E+ L R+ P +H H +
Sbjct: 121 KTASVVMSQAFGHPTFPVDTHIHRLAQRWGLTSGKNVVQTEKDLKRLFPIEHWNALHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR C AR + C I C
Sbjct: 181 IYYGREYCSARGCDGRVCEICTSC 204
>gi|118477098|ref|YP_894249.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Bacillus thuringiensis str. Al Hakam]
gi|196046606|ref|ZP_03113830.1| endonuclease III [Bacillus cereus 03BB108]
gi|118416323|gb|ABK84742.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Bacillus thuringiensis str. Al Hakam]
gi|196022539|gb|EDX61222.1| endonuclease III [Bacillus cereus 03BB108]
Length = 215
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AF IP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFDIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|30261643|ref|NP_844020.1| endonuclease III [Bacillus anthracis str. Ames]
gi|47526844|ref|YP_018193.1| endonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49184473|ref|YP_027725.1| endonuclease III [Bacillus anthracis str. Sterne]
gi|49480992|ref|YP_035762.1| endonuclease III [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52143802|ref|YP_083026.1| endonuclease III [Bacillus cereus E33L]
gi|165869478|ref|ZP_02214137.1| endonuclease III [Bacillus anthracis str. A0488]
gi|167633230|ref|ZP_02391555.1| endonuclease III [Bacillus anthracis str. A0442]
gi|167639056|ref|ZP_02397329.1| endonuclease III [Bacillus anthracis str. A0193]
gi|170686214|ref|ZP_02877436.1| endonuclease III [Bacillus anthracis str. A0465]
gi|170706506|ref|ZP_02896966.1| endonuclease III [Bacillus anthracis str. A0389]
gi|177650476|ref|ZP_02933443.1| endonuclease III [Bacillus anthracis str. A0174]
gi|190568691|ref|ZP_03021596.1| endonuclease III [Bacillus anthracis Tsiankovskii-I]
gi|196033451|ref|ZP_03100863.1| endonuclease III [Bacillus cereus W]
gi|196039039|ref|ZP_03106346.1| endonuclease III [Bacillus cereus NVH0597-99]
gi|206974874|ref|ZP_03235789.1| endonuclease III [Bacillus cereus H3081.97]
gi|217959128|ref|YP_002337676.1| endonuclease III [Bacillus cereus AH187]
gi|218902758|ref|YP_002450592.1| endonuclease III [Bacillus cereus AH820]
gi|222095276|ref|YP_002529336.1| endonuclease iii [Bacillus cereus Q1]
gi|225863510|ref|YP_002748888.1| endonuclease III [Bacillus cereus 03BB102]
gi|227815606|ref|YP_002815615.1| endonuclease III [Bacillus anthracis str. CDC 684]
gi|228914222|ref|ZP_04077838.1| endonuclease III [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228926677|ref|ZP_04089746.1| endonuclease III [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228932935|ref|ZP_04095800.1| endonuclease III [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228945246|ref|ZP_04107602.1| endonuclease III [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229090610|ref|ZP_04221844.1| endonuclease III [Bacillus cereus Rock3-42]
gi|229121189|ref|ZP_04250426.1| endonuclease III [Bacillus cereus 95/8201]
gi|229138342|ref|ZP_04266936.1| endonuclease III [Bacillus cereus BDRD-ST26]
gi|229183841|ref|ZP_04311058.1| endonuclease III [Bacillus cereus BGSC 6E1]
gi|229195848|ref|ZP_04322607.1| endonuclease III [Bacillus cereus m1293]
gi|229603272|ref|YP_002866050.1| endonuclease III [Bacillus anthracis str. A0248]
gi|254683134|ref|ZP_05146995.1| endonuclease III [Bacillus anthracis str. CNEVA-9066]
gi|254723722|ref|ZP_05185508.1| endonuclease III [Bacillus anthracis str. A1055]
gi|254734483|ref|ZP_05192195.1| endonuclease III [Bacillus anthracis str. Western North America
USA6153]
gi|254740894|ref|ZP_05198582.1| endonuclease III [Bacillus anthracis str. Kruger B]
gi|254755133|ref|ZP_05207167.1| endonuclease III [Bacillus anthracis str. Vollum]
gi|254759670|ref|ZP_05211694.1| endonuclease III [Bacillus anthracis str. Australia 94]
gi|300117426|ref|ZP_07055216.1| endonuclease III [Bacillus cereus SJ1]
gi|301053184|ref|YP_003791395.1| endonuclease III [Bacillus anthracis CI]
gi|30255871|gb|AAP25506.1| endonuclease III [Bacillus anthracis str. Ames]
gi|47501992|gb|AAT30668.1| endonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49178400|gb|AAT53776.1| endonuclease III [Bacillus anthracis str. Sterne]
gi|49332548|gb|AAT63194.1| endonuclease III [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51977271|gb|AAU18821.1| endonuclease III [Bacillus cereus E33L]
gi|164714918|gb|EDR20436.1| endonuclease III [Bacillus anthracis str. A0488]
gi|167512846|gb|EDR88219.1| endonuclease III [Bacillus anthracis str. A0193]
gi|167531268|gb|EDR93946.1| endonuclease III [Bacillus anthracis str. A0442]
gi|170128604|gb|EDS97471.1| endonuclease III [Bacillus anthracis str. A0389]
gi|170669911|gb|EDT20652.1| endonuclease III [Bacillus anthracis str. A0465]
gi|172083620|gb|EDT68680.1| endonuclease III [Bacillus anthracis str. A0174]
gi|190560291|gb|EDV14271.1| endonuclease III [Bacillus anthracis Tsiankovskii-I]
gi|195993885|gb|EDX57841.1| endonuclease III [Bacillus cereus W]
gi|196030184|gb|EDX68784.1| endonuclease III [Bacillus cereus NVH0597-99]
gi|206746893|gb|EDZ58285.1| endonuclease III [Bacillus cereus H3081.97]
gi|217068099|gb|ACJ82349.1| endonuclease III [Bacillus cereus AH187]
gi|218539442|gb|ACK91840.1| endonuclease III [Bacillus cereus AH820]
gi|221239334|gb|ACM12044.1| endonuclease III [Bacillus cereus Q1]
gi|225788128|gb|ACO28345.1| endonuclease III [Bacillus cereus 03BB102]
gi|227002398|gb|ACP12141.1| endonuclease III [Bacillus anthracis str. CDC 684]
gi|228587621|gb|EEK45680.1| endonuclease III [Bacillus cereus m1293]
gi|228599690|gb|EEK57293.1| endonuclease III [Bacillus cereus BGSC 6E1]
gi|228645107|gb|EEL01345.1| endonuclease III [Bacillus cereus BDRD-ST26]
gi|228662308|gb|EEL17911.1| endonuclease III [Bacillus cereus 95/8201]
gi|228692753|gb|EEL46478.1| endonuclease III [Bacillus cereus Rock3-42]
gi|228814481|gb|EEM60746.1| endonuclease III [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228826738|gb|EEM72507.1| endonuclease III [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228833053|gb|EEM78621.1| endonuclease III [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228845426|gb|EEM90461.1| endonuclease III [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229267680|gb|ACQ49317.1| endonuclease III [Bacillus anthracis str. A0248]
gi|298725261|gb|EFI65913.1| endonuclease III [Bacillus cereus SJ1]
gi|300375353|gb|ADK04257.1| endonuclease III [Bacillus cereus biovar anthracis str. CI]
Length = 215
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|227528843|ref|ZP_03958892.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus vaginalis
ATCC 49540]
gi|227351236|gb|EEJ41527.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus vaginalis
ATCC 49540]
Length = 213
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T E+ + +P L F ++A +LSAQSTD +VN T LF
Sbjct: 1 MLTDSEIVNAIHQMRAMFPEAGTTLKADTTFHFLLATILSAQSTDKSVNMVTPLLFARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + + ++ +I+++G+Y K++ ++ + ++ F+ ++P T++ LT L G+GR
Sbjct: 61 TPESLASAEPEDIEPFIQSLGLYHNKAKYLVKAAQGIVTNFNGEVPHTMKELTSLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ F IP VDTH+ R++ R+G+ T ++E+ L +P +AH+
Sbjct: 121 KVANVVLAECFNIPAFPVDTHVSRVARRLGMVKPNATVLQIEKRLKEAVPKDEWLDAHHA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY C A+ P+C C + +CK +
Sbjct: 181 MIFFGRYQCTAKNPKCTKCPLLPICKYGR 209
>gi|324325663|gb|ADY20923.1| endonuclease III [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 215
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAFCRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|315185324|gb|EFU19099.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Spirochaeta thermophila DSM 6578]
Length = 238
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 111/202 (54%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E I+ + ++ + + F L+V V+LSAQSTD VN LF TP
Sbjct: 4 RRERFEHIYRILEEEYADTSSFISFAEPFQLLVGVILSAQSTDRQVNLILPELFVRFPTP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++++ +R++G +R K+ NI + ++ + ++P+ +E L LPG+GRK
Sbjct: 64 KDLAEAPAEEIETLVRSVGFFRMKARNIKETARLVHERWRGRVPERMEDLLLLPGVGRKS 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI +G P I VDTH R+ R+GL +TP ++E+ L IPP QY +
Sbjct: 124 ANVIRGTIYGRPAIIVDTHFGRVVRRLGLTEERTPERIERDLASWIPPGKQYPFSMRINR 183
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
HGR VC AR+P C+SC ++ C
Sbjct: 184 HGRAVCTARRPACESCRLAPFC 205
>gi|283781452|ref|YP_003372207.1| endonuclease III [Pirellula staleyi DSM 6068]
gi|283439905|gb|ADB18347.1| endonuclease III [Pirellula staleyi DSM 6068]
Length = 214
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ + + L + + + L++A +LSAQ TD VN T+ LF+
Sbjct: 1 MARKRKGEQAGLVVEGLKRDYADALCALEHQSPYQLLIATILSAQCTDERVNIVTRDLFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T M K ++ +++ G +R K++NI S L+ ++ +P+ LE L +LPG
Sbjct: 61 HYPTADAMAEAPLKSIEKLVQSTGFFRNKAKNIKECSRQLVEQYAGAVPRELELLVKLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L FGIP+ + VDTH+ R+S R+GL P K+E+ L+ +P +
Sbjct: 121 VGRKTANVVLGTCFGIPSGVVVDTHVGRLSQRLGLTKEVDPVKIERDLMAQLPQEEWIMF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ HGR VCKARKP C C + C RI
Sbjct: 181 SHRMIHHGRRVCKARKPACDHCNFAEFCPRI 211
>gi|25010584|ref|NP_734979.1| endonuclease III [Streptococcus agalactiae NEM316]
gi|77408409|ref|ZP_00785149.1| endonuclease III [Streptococcus agalactiae COH1]
gi|77413567|ref|ZP_00789755.1| endonuclease III [Streptococcus agalactiae 515]
gi|23094937|emb|CAD46159.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160396|gb|EAO71519.1| endonuclease III [Streptococcus agalactiae 515]
gi|77173012|gb|EAO76141.1| endonuclease III [Streptococcus agalactiae COH1]
gi|319744534|gb|EFV96888.1| endonuclease III [Streptococcus agalactiae ATCC 13813]
Length = 210
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +P K L + N F L+VAV+LSAQ+TD VNK T LFE
Sbjct: 1 MLSKAKSRYIIREIIKLFPDAKPSLDFTNVFELLVAVMLSAQTTDAAVNKVTPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + K+++ YI IG+YR K+ + + LI FD K+PQT + L L G+GR
Sbjct: 61 NPLVLAQADPKEIEPYISKIGLYRNKARFLNQCAKQLIEHFDGKVPQTRQELESLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + +P ++E+ ++ ++PP+ AH
Sbjct: 121 KTANVVMSVGFGIPAFAVDTHVTRICKHHQICKQSASPLEIEKRVMEVLPPEEWLAAHQS 180
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 181 MIYFGRAICHPKNPKCDQ 198
>gi|291276709|ref|YP_003516481.1| endonuclease III [Helicobacter mustelae 12198]
gi|290963903|emb|CBG39740.1| endonuclease III [Helicobacter mustelae 12198]
Length = 212
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 77/204 (37%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ E I F +P+PK EL Y N + L+VAV+LSAQ TD VN T LF
Sbjct: 1 MRKTQKAEIIKERFLQHYPAPKTELKYQNIYELLVAVMLSAQCTDKRVNIVTPALFSRYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ ++L+ YIR++ + K++N+I++++ L+ F +IP+ E L LPG+G+
Sbjct: 61 TPKQLADANLEELKEYIRSVSFFNNKAKNLIAMANQLLESFGGEIPRDRELLKMLPGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L + VDTH+FR S+R+GL+ K+ + E L ++ H
Sbjct: 121 KTANVVLIEYCEANLMAVDTHVFRTSHRLGLSKSKSALQTEVDLCKLF-KTDLDKLHQAF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
VL GRYVCKA +P C+SC ++ C
Sbjct: 180 VLFGRYVCKALRPACESCFVNEFC 203
>gi|242309236|ref|ZP_04808391.1| endonuclease III [Helicobacter pullorum MIT 98-5489]
gi|239524277|gb|EEQ64143.1| endonuclease III [Helicobacter pullorum MIT 98-5489]
Length = 214
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 1/204 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE++EI LF + + K EL Y N + L++AV+LSAQ TD VN T LF+ P
Sbjct: 6 TKKEIQEIKSLFLKHYKNAKTELIYKNDYELLIAVMLSAQCTDKRVNLITPALFKQYPNP 65
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++ +I+T + K+ N+ +++ ++ +F+ +IP E L LPG+G+K
Sbjct: 66 KALQNAPLDEIKEFIKTCSFFNNKATNLKAMAQVVCEKFNGEIPLDREILKTLPGVGQKT 125
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV+L + I VDTH+FR+S+R+GL+ KTP + E+ L +I + H +VL
Sbjct: 126 ANVVLIESKEANFIAVDTHVFRVSHRLGLSNAKTPLQTEEELTKIFV-DNLATLHQAMVL 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GRY CKA PQCQ C +S+LCK
Sbjct: 185 FGRYTCKALNPQCQECFLSHLCKS 208
>gi|15639762|ref|NP_219212.1| endonuclease III (nth) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026000|ref|YP_001933772.1| endonuclease III [Treponema pallidum subsp. pallidum SS14]
gi|8134428|sp|O83754|END3_TREPA RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|3323085|gb|AAC65744.1| endonuclease III (nth) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018575|gb|ACD71193.1| endonuclease III [Treponema pallidum subsp. pallidum SS14]
gi|291060136|gb|ADD72871.1| endonuclease III [Treponema pallidum subsp. pallidum str. Chicago]
Length = 211
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 106/205 (51%), Positives = 143/205 (69%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L K + +F P P+GEL++ N FTL+VAVLLSAQ+TD +VNKAT LF++A
Sbjct: 2 RLLDSKGVHAVFEQLHAANPQPQGELHWRNTFTLLVAVLLSAQATDKSVNKATAALFDVA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
DTPQ MLA+GE++L +YIRTI +Y K+ II+LS LI F ++P L LPG+G
Sbjct: 62 DTPQAMLALGEERLCSYIRTINLYPTKARRIIALSAELIERFAAQVPCDAHALESLPGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+M FGIPTI VDTHI R + RIGL+ G+TP VE+ LL + P + + +AH+W
Sbjct: 122 HKTANVVLNMGFGIPTIAVDTHILRTAPRIGLSSGRTPRAVERDLLVVTPREFRMHAHHW 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++LHGRY C AR+P+C C + +LC
Sbjct: 182 ILLHGRYTCTARRPRCTECCLRDLC 206
>gi|224541854|ref|ZP_03682393.1| hypothetical protein CATMIT_01026 [Catenibacterium mitsuokai DSM
15897]
gi|224525204|gb|EEF94309.1| hypothetical protein CATMIT_01026 [Catenibacterium mitsuokai DSM
15897]
Length = 211
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + I F +P+ + L + N+ L+VAV+LSAQ+TD +VNK T HLF+ T
Sbjct: 1 MIKTKQDRILNTFDEMFPNARCVLNHSNNLELLVAVMLSAQTTDESVNKLTSHLFQKYKT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+L++ + +IG+YR K++NI +++ L F+ +P + + L LPG+GRK
Sbjct: 61 VDDYANASLPELESDLHSIGLYRNKAKNIKAMAVALQARFNGVVPASHDALISLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV+++ FG P I VDTH+ RIS R+G A P T VE+ L++ IP H+ +
Sbjct: 121 TANVVMAEGFGYPAIAVDTHVERISKRLGFAKPEDTVLTVEKKLMKTIPKNRWIKTHHQM 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CKA P C+ C + ++CK +
Sbjct: 181 IFFGRYHCKAMSPHCKECPLVDICKEKNK 209
>gi|218281634|ref|ZP_03488042.1| hypothetical protein EUBIFOR_00609 [Eubacterium biforme DSM 3989]
gi|218217269|gb|EEC90807.1| hypothetical protein EUBIFOR_00609 [Eubacterium biforme DSM 3989]
Length = 208
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
EI +P+ K ELY+ + F LIVAV+LSAQ+TD VNK T LF+ T +KM
Sbjct: 3 ANEILDEMEKIFPNAKCELYHESAFQLIVAVVLSAQTTDAMVNKVTPALFKAYPTAEKMA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+L+ YI+ IG+YR K+ +I +LS L+ + ++P T + L L G+GRK ANV+
Sbjct: 63 EATVSELEPYIKRIGLYRNKARSISNLSKDLVERYHGQVPYTYKDLMSLAGVGRKTANVV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
S+AF IP+ VDTH+ R+S R+GLA + KVE+ L R I H+ + GR
Sbjct: 123 RSVAFDIPSFAVDTHVNRVSKRLGLAKYNDSVEKVEEKLKRKIDRSRWNQGHHDFIFFGR 182
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
Y+C +R P+C+ C + CK+ K
Sbjct: 183 YLCHSRNPECERCPFKSFCKKDK 205
>gi|228984726|ref|ZP_04144898.1| endonuclease III [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228774924|gb|EEM23318.1| endonuclease III [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 215
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 KPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECPLLEVCREGKK 210
>gi|94987220|ref|YP_595153.1| endonuclease III, putative [Lawsonia intracellularis PHE/MN1-00]
gi|94731469|emb|CAJ54832.1| endonuclease III, putative [Lawsonia intracellularis PHE/MN1-00]
Length = 216
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + L ++P+ + L N + L++A +LSAQ TD VN+ T LF P
Sbjct: 8 KKQRAACVLSLLKKRYPTFETHLVASNPWELLIATILSAQCTDARVNQVTPILFTRWPDP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++++ IRT G Y+ K+++II + ++ ++ +PQT++ L LPG+ RK
Sbjct: 68 SALALAMLEEVEQVIRTTGFYKSKAKHIIETAKRIMYNYNGVVPQTMDELITLPGVARKT 127
Query: 141 ANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L FGI I VDTH+ RIS R+GL K P+ VE+ L+ + P ++ +V
Sbjct: 128 ANVVLWGGFGINVGIAVDTHVKRISYRLGLTANKDPSLVEKDLMNLFPQSEWGAINHRMV 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
GR+VCKA+ P C C ++ C
Sbjct: 188 WFGRHVCKAKNPLCTLCEMNTFCPH 212
>gi|312865711|ref|ZP_07725935.1| endonuclease III [Streptococcus downei F0415]
gi|311098832|gb|EFQ57052.1| endonuclease III [Streptococcus downei F0415]
Length = 216
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VN+ T LF+
Sbjct: 8 VLSKKRARKVIEEIIALYPHAKPSLNFTNHFELLVAVMLSAQTTDAAVNQVTPALFKAYP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ M E L YI +G+YR K++ + + L+ +F ++P T + L L G+GR
Sbjct: 68 SPEAMAQASEADLAKYISRLGLYRNKAKYLKKCAQQLVEDFGGQVPHTRKELENLAGVGR 127
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGI VDTH+ RI + +P +VE+ +++++P + AH
Sbjct: 128 KTANVVMSVGFGISAFAVDTHVERICKHHEIVKKSASPLEVERRVMKVLPREEWLPAHQA 187
Query: 198 LVLHGRYVCKARKPQCQS 215
++L GR VC + P+C +
Sbjct: 188 MILFGREVCHPKNPECHN 205
>gi|295100780|emb|CBK98325.1| Predicted EndoIII-related endonuclease [Faecalibacterium
prausnitzii L2-6]
Length = 226
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ ++P L Y + + L+V+V L+AQ TD VN + LF +
Sbjct: 14 KKELALEVIRRLKAEYPDAGCTLDYDHAWQLLVSVRLAAQCTDARVNIVVQDLFAKYPSV 73
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++ ++ G+ R K+ +I + +L +++D K+P T E L LPG+GRK
Sbjct: 74 AALAEAEPEDIEAIVKPCGLGRSKARDISACMRMLRDKYDCKVPTTFEELLALPGVGRKS 133
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+I+ FG P I DTH R+ N+IGL G P KVE +L +I+PP+ + + V
Sbjct: 134 ANLIMGDVFGKPAIVTDTHCIRLCNKIGLVDGIKEPQKVEMALWKIVPPEEGSDLCHRFV 193
Query: 200 LHGRYVCKARKPQCQSCIISNLCK 223
+HGR VC ARKP+C+ C +S++C+
Sbjct: 194 MHGRAVCNARKPECEKCCLSDICR 217
>gi|221195209|ref|ZP_03568265.1| endonuclease III [Atopobium rimae ATCC 49626]
gi|221185112|gb|EEE17503.1| endonuclease III [Atopobium rimae ATCC 49626]
Length = 231
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ E +P + L Y N +TL+VAV+LSAQ+TD VNK T LF
Sbjct: 3 RESKRLKQERGVETCRRLHTLYPHVESALEYHNAYTLLVAVMLSAQTTDAAVNKVTPELF 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
P+ M + ++ IRTIG +R K+ + ++ IL+ ++ ++PQT+E L +LP
Sbjct: 63 RRWPNPEAMASAQPSEVGECIRTIGFWRAKAAHCTEMAQILMADYGGEVPQTMEELVKLP 122
Query: 135 GIGRKGANVI-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++ M + I VDTH++RI++R+ L TP EQ LL ++P + +
Sbjct: 123 GVGRKTANIVLNKMFNTVDGIAVDTHVYRIASRLRLTSAATPLAAEQDLLSLLPHELWKD 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + GR +C AR P C +C +S++C
Sbjct: 183 VNEEWIHFGRDICTARNPTCSACPLSDICPS 213
>gi|257439848|ref|ZP_05615603.1| endonuclease III [Faecalibacterium prausnitzii A2-165]
gi|257197757|gb|EEU96041.1| endonuclease III [Faecalibacterium prausnitzii A2-165]
Length = 233
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ ++P L Y + + L+V+V L+AQ TD VN + LF
Sbjct: 13 KKELALQVIDRLKTEYPDAACTLDYDHAWQLLVSVRLAAQCTDARVNIVVQDLFAKYPNV 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A +++ ++ G+ R K+ +I + +L ++++ K+P T E L LPG+GRK
Sbjct: 73 AALAAAEPDEIEAIVKPCGLGRSKARDISACMRVLRDKYNCKVPTTFEELLALPGVGRKS 132
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+I+ F P I DTH R+ N+IGL G P KVE +L +IIPP+ + + V
Sbjct: 133 ANLIMGDVFCKPAIVTDTHCIRLCNKIGLVDGIKEPQKVEMALWKIIPPEEGSDLCHRFV 192
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+HGR VC ARKP+C+ C ++++C+ +
Sbjct: 193 MHGRAVCNARKPECEKCCLNDICRYAAE 220
>gi|304382735|ref|ZP_07365226.1| endonuclease III [Prevotella marshii DSM 16973]
gi|304336130|gb|EFM02375.1| endonuclease III [Prevotella marshii DSM 16973]
Length = 232
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + E + F K EL + + F L+ A LLSAQ TD +N+ T LF+
Sbjct: 15 VMNRKQRYEYVLNYFRKKTGRVTTELEFGSVFQLLCATLLSAQCTDKRINQVTPALFKAY 74
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ M ++ Y++++ K+ +++ +S +L+ +F ++P TL L +LPG+G
Sbjct: 75 PDAKAMAEADYDEVLEYVKSVSYPNAKTRHMVDMSRMLVEDFGGEVPDTLTDLIKLPGVG 134
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAH 195
RK ANVI ++AFG T+ VDTH++R+S+R+GL TP KVEQ L++ IP + +AH
Sbjct: 135 RKTANVIQAVAFGKATMAVDTHVYRVSHRLGLVTRTADTPLKVEQELMKNIPQEDIPDAH 194
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+WL+LHGRYVC +R P+C C ++++C ++
Sbjct: 195 HWLLLHGRYVCISRNPKCAQCDLNDVCPKL 224
>gi|22536647|ref|NP_687498.1| endonuclease III [Streptococcus agalactiae 2603V/R]
gi|76786990|ref|YP_329202.1| endonuclease III [Streptococcus agalactiae A909]
gi|77405601|ref|ZP_00782691.1| endonuclease III [Streptococcus agalactiae H36B]
gi|77411422|ref|ZP_00787768.1| endonuclease III [Streptococcus agalactiae CJB111]
gi|22533486|gb|AAM99370.1|AE014213_9 endonuclease III [Streptococcus agalactiae 2603V/R]
gi|76562047|gb|ABA44631.1| endonuclease III [Streptococcus agalactiae A909]
gi|77162508|gb|EAO73473.1| endonuclease III [Streptococcus agalactiae CJB111]
gi|77175823|gb|EAO78602.1| endonuclease III [Streptococcus agalactiae H36B]
Length = 210
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +P K L + N F L+VAV+LSAQ+TD VNK T LFE
Sbjct: 1 MLSKAKSRYIIREIIKLFPDAKPSLDFTNVFELLVAVMLSAQTTDAAVNKVTPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + K+++ YI IG+YR K+ + + LI FD K+P+T + L L G+GR
Sbjct: 61 NPLVLAQADPKEIEPYISKIGLYRNKARFLNQCAKQLIEHFDGKVPRTRQELESLAGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + +P ++E+ ++ ++PP+ AH
Sbjct: 121 KTANVVMSVGFGIPAFAVDTHVTRICKHHQICKQSASPLEIEKRVMEVLPPEEWLAAHQS 180
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 181 MIYFGRAICHPKNPKCDQ 198
>gi|322386975|ref|ZP_08060599.1| endonuclease III [Streptococcus cristatus ATCC 51100]
gi|321269257|gb|EFX52193.1| endonuclease III [Streptococcus cristatus ATCC 51100]
Length = 209
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT +LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPNLFLAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M A E + +I +G+YR K++ + + L+ +F+ ++PQT L L G+GR
Sbjct: 62 TPEAMAAASEADIAKHISRLGLYRNKAKFLKKCAQQLLEQFEGQVPQTRTELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ F IP VDTH+ RI + +P +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFSIPAFAVDTHVERICKHHNIVKKSASPLEVEKRVMDVLPPERWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|291541810|emb|CBL14920.1| endonuclease III [Ruminococcus bromii L2-63]
Length = 208
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 115/206 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + ++P L Y + L++A L+AQ TD VN T LF+
Sbjct: 1 MTKKEIAVNAVHALKKEYPDAICSLVYTDPLQLLIATRLAAQCTDARVNMVTPSLFDRFK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q +++ YI++ G+Y+ KS++I+ ++ +L ++F +P ++ LT+LPGIGR
Sbjct: 61 TAQDFADSTPEEVAEYIKSCGLYKTKSKDIVEMARMLCDDFGGVVPDNIDDLTKLPGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++ FG P + VDTH RI+ R+GL K K+E +L ++PP + + L
Sbjct: 121 KTANLVCGDIFGQPAVVVDTHCIRITKRLGLHDLKDQKKIEFALRELLPPDESNDFCHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
VLHGR VC ARK +C+ C ++ C +
Sbjct: 181 VLHGRAVCTARKAKCEECCMNEFCPK 206
>gi|261367567|ref|ZP_05980450.1| hypothetical protein SUBVAR_05668 [Subdoligranulum variabile DSM
15176]
gi|282570354|gb|EFB75889.1| endonuclease III [Subdoligranulum variabile DSM 15176]
Length = 218
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Query: 20 YTPKELEEI-FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
T KEL +I ++P + L Y + + L+V V L+AQ TD VN + LF
Sbjct: 1 MTKKELAQICIDRLKAEYPLAECTLDYDHAWQLLVEVRLAAQCTDARVNVVVQDLFARYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + A ++++ ++ G+ R K+ +I + +L ++++ K+P + L LPG+GR
Sbjct: 61 SVEALAAATPEEIEAIVKPCGLGRSKARDISACMRMLRDQYNGKVPDDFDALLSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ FG P I DTH R+ NRIGL P KVE+ L +IIPP+ + +
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLCNRIGLVDNIKEPAKVERELWKIIPPEEGSDFCHR 180
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
LV HGR VC AR P C C ++++C+ K
Sbjct: 181 LVYHGRAVCTARTTPFCSKCCLADVCRAGK 210
>gi|312622309|ref|YP_004023922.1| endonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
gi|312202776|gb|ADQ46103.1| endonuclease III [Caldicellulosiruptor kronotskyensis 2002]
Length = 202
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 119/199 (59%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P PK L Y + L++A +L+AQSTD VNK T LF+ T +
Sbjct: 1 MIKELLKIYPQPKCTLNYNKPYELLIATILAAQSTDERVNKITAELFKKYPTLESFAKAN 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+L+N I+ +G Y+ K+++I + I++ +++ +P T+E L +L G+GRK ANVI++
Sbjct: 61 ISELENDIKPVGFYKNKAKSIKETARIIVEKYNGTLPTTIEELVKLKGVGRKTANVIMAN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+GIP+I VDTH R+SNR+GL K K+E L +I+ P+ +V HGR VCK
Sbjct: 121 IYGIPSIIVDTHCKRLSNRLGLVNSKDATKIEFELKKIVEPQLYTIFSNLMVYHGRAVCK 180
Query: 208 ARKPQCQSCIISNLCKRIK 226
A KP+C+ C I ++C+ K
Sbjct: 181 AIKPRCEVCTIKDVCEYFK 199
>gi|297621994|ref|YP_003710131.1| endonuclease III [Waddlia chondrophila WSU 86-1044]
gi|297377295|gb|ADI39125.1| endonuclease III [Waddlia chondrophila WSU 86-1044]
Length = 204
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 113/198 (57%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+ + I +P+P L + + +TL++AVLLSAQ TD VN+ T LF ADTPQ+
Sbjct: 2 KKAQFIQETLEKLYPNPPIPLTHQDPYTLLIAVLLSAQCTDARVNQITPILFHRADTPQQ 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M + ++++ IR G+ KK++ I LS IL+++ + +P T E L LPG+G K A+
Sbjct: 62 MAVVPVEEIEEIIRPCGLAPKKAKAIRGLSQILLDKHNGNVPDTFEELEALPGVGHKTAS 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V++S AF P VDTHI R + R GL+ GK+ + E+ L RI P K H ++
Sbjct: 122 VVMSQAFHHPAFPVDTHIHRAAKRWGLSNGKSVEQTEKDLKRIFPKKSWNKLHLQIIYFC 181
Query: 203 RYVCKARKPQCQSCIISN 220
R C A+K C I +
Sbjct: 182 REYCPAKKHDPALCPICS 199
>gi|322389116|ref|ZP_08062680.1| endonuclease III [Streptococcus parasanguinis ATCC 903]
gi|321144200|gb|EFX39614.1| endonuclease III [Streptococcus parasanguinis ATCC 903]
Length = 207
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A E + +I +G+YR K++ + + L++ FD ++PQT E L L G+GR
Sbjct: 62 TPQAMAAASEADIAKHISKLGLYRNKAKFLKKCAQQLLDNFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPKSEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|319939582|ref|ZP_08013941.1| endonuclease III [Streptococcus anginosus 1_2_62CV]
gi|319811171|gb|EFW07477.1| endonuclease III [Streptococcus anginosus 1_2_62CV]
Length = 207
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VN T LF+
Sbjct: 2 VLSKKRARKVIEEIIALFPDAKPSLNFTNHFELLVAVMLSAQTTDAAVNTVTPALFKAYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM A E ++ NYI +G+YR K++ + + L+++FD ++P T + L L G+GR
Sbjct: 62 TPQKMAAASESEIANYIARLGLYRNKAKFLKKCAQQLLDDFDGQVPHTRKELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VEQ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEQRVMEVLPKNEWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C R P+C
Sbjct: 182 MICFGREICHPRNPKCDQ 199
>gi|224418313|ref|ZP_03656319.1| endonuclease III [Helicobacter canadensis MIT 98-5491]
gi|253827635|ref|ZP_04870520.1| endonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313141843|ref|ZP_07804036.1| endonuclease III [Helicobacter canadensis MIT 98-5491]
gi|253511041|gb|EES89700.1| endonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313130874|gb|EFR48491.1| endonuclease III [Helicobacter canadensis MIT 98-5491]
Length = 218
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E++ I LF + + K EL Y N + L++AV+LSAQ TD VN T LF+ TPQ +
Sbjct: 13 EIQTIKALFLEHYKNAKTELIYRNDYELLIAVMLSAQCTDKRVNLITPALFDQYPTPQDL 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++N I++ + K+ N+ +++ + +FD IP E L LPG+G+K ANV
Sbjct: 73 KDAPLEDIKNLIKSCSFFNNKATNLKAMAKEVCEKFDGVIPLDREALKSLPGVGQKTANV 132
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L + I VDTH+FR+S+R+GL+ TP K E+ L +I + H +VL GR
Sbjct: 133 VLIESKEANFIAVDTHVFRVSHRLGLSNANTPLKTEEDLTKIF-ADNLATLHQAMVLFGR 191
Query: 204 YVCKARKPQCQSCIISNLCKR 224
Y+CKA PQCQ+C +S+LCK
Sbjct: 192 YICKALNPQCQNCFLSHLCKS 212
>gi|260063003|ref|YP_003196083.1| endonuclease III [Robiginitalea biformata HTCC2501]
gi|88784572|gb|EAR15742.1| endonuclease III [Robiginitalea biformata HTCC2501]
Length = 221
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 112/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ I + +P L + + +TL+VAVLLSAQSTDV VN+ T LF A
Sbjct: 1 MTRKEKAAYIIDVLESIYPEVPVPLDHQDPYTLLVAVLLSAQSTDVRVNQTTPLLFARAS 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ M + +++++ IR +G+ K++ I LS IL+ E ++P+ LE L RLPG+G
Sbjct: 61 TPEDMAKVPVEEIRDIIRPVGLSPTKAKAIRRLSEILVEEHGGRVPRDLEALERLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R GL+ GK + E+ R+ P + H +
Sbjct: 121 KTASVVVSQAFGIPAFPVDTHIHRLMYRWGLSTGKNVVQTEKDAKRLFPEELWNKLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR C AR
Sbjct: 181 IWYGREYCPAR 191
>gi|19703409|ref|NP_602971.1| endonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713479|gb|AAL94270.1| Endonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 201
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 2/198 (1%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
K+ +PK L + F L+VAV+LSAQ TD VN T+ +F+ +TP++ + +++
Sbjct: 1 MEKKFGTPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVNTPEQFANMELEEI 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG- 150
+NYI++ G +R K++NI S L+ +++ +IPQ ++ LT L G+GRK ANV+ +G
Sbjct: 61 ENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGL 120
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
I VDTH+ R++N IGL + P K+E L++I+P K ++L+LHGR C AR+
Sbjct: 121 ADGITVDTHVKRLTNLIGLVDSEDPVKIELELMKIVPKKSWIVFSHYLILHGRATCIARR 180
Query: 211 PQCQSCIISNLCKR-IKQ 227
P+C C IS C IK+
Sbjct: 181 PRCLECEISKYCNYGIKK 198
>gi|262038946|ref|ZP_06012286.1| endonuclease III [Leptotrichia goodfellowii F0264]
gi|261747027|gb|EEY34526.1| endonuclease III [Leptotrichia goodfellowii F0264]
Length = 224
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 4/212 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + IF ++ PK L + + L++AV+LSAQ TD VN TK LF++
Sbjct: 1 MTKKERFNLIFPYLQERYGKPKCALDFETSYQLMIAVILSAQCTDARVNIVTKELFKVVK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + + L+ YI++ G YR K++NI + ++NE++ KIP+ ++ L +L G+GR
Sbjct: 61 TPEDIHNMDLETLEKYIKSTGFYRNKAKNIKLNAEQVLNEYNGKIPKKMDELVKLAGVGR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L +GI I VDTH+ R+S R+GL P +E+ L++I+P K+ + ++
Sbjct: 121 KTANVVLGEVWGISEGIVVDTHVKRLSKRMGLTKSDNPEIIERELMKIVPKKYWFVFSHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISN---LCKRIK 226
L+L+GR V A P+C CII+ C++ K
Sbjct: 181 LILYGREVSTAINPKCDICIINKYFNYCEKEK 212
>gi|223039652|ref|ZP_03609938.1| endonuclease III [Campylobacter rectus RM3267]
gi|222879035|gb|EEF14130.1| endonuclease III [Campylobacter rectus RM3267]
Length = 211
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ I LF + EL + N + L+V V+LSAQ TD VN T LFE
Sbjct: 1 MRTKKDVNAIKNLFLENYKDAGSELKFQNLYELLVCVMLSAQCTDKRVNLITPSLFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ I + + K+EN+I ++ +++EFD +IP T + L L G+G+
Sbjct: 61 DVASLARANLASVKALINSCSFFNNKAENLIKMAKSVMSEFDGEIPATEKELMSLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L FG + VDTH+FR+++R+GL+ GKTP VE L + H +
Sbjct: 121 KTAHVVLIEHFGSNLMAVDTHVFRVAHRLGLSRGKTPEAVELDLTKAF-KTQLNTLHQAM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VL GRY CKA KP C+ C ++ LC +
Sbjct: 180 VLFGRYTCKAIKPNCKECFLNELCSSKDK 208
>gi|222823916|ref|YP_002575490.1| endonuclease III [Campylobacter lari RM2100]
gi|222539138|gb|ACM64239.1| endonuclease III [Campylobacter lari RM2100]
Length = 208
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + K EL + N + LIV V+LSAQ TD VN T LFE + Q
Sbjct: 2 KRNLEIKKLFLEHFGEAKTELVFSNAYELIVCVMLSAQCTDKRVNLITPALFEAYPSVQD 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ I + Y K++N+I ++ + +F+ +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKLLINSCSFYNNKAQNLIKMAQAVCEQFNGEIPTNEQDLKTLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V++ G + VDTH+FR+S+R+ L+ KTP + E+ L +I + H +VL G
Sbjct: 122 VVMIEWCGANCMAVDTHVFRVSHRLNLSKAKTPEETEKDLTKIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+ P C+ C +++LCK +
Sbjct: 181 RYTCKAKNPLCKECFLNHLCKSKDK 205
>gi|315303830|ref|ZP_07874318.1| endonuclease III [Listeria ivanovii FSL F6-596]
gi|313627791|gb|EFR96436.1| endonuclease III [Listeria ivanovii FSL F6-596]
Length = 232
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 134/211 (63%), Gaps = 1/211 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 13 KLLSNKQTVLCIEEMAKMFPAAHCELIHKNSFELLVAVVLSAQCTDVLVNRVTASLFEKY 72
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ LA+ ++L + IR+IG+YR K++NI LS L+ EF+ K+P+T L LPG+G
Sbjct: 73 HKPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSQKLLTEFNGKVPRTHSELESLPGVG 132
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHY 196
RK ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P +AH+
Sbjct: 133 RKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPESLWSDAHH 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ GRY CKAR P+C +C + LC+ K+
Sbjct: 193 YMIFFGRYHCKARNPECPTCPLLYLCREGKK 223
>gi|309800598|ref|ZP_07694743.1| endonuclease III [Streptococcus infantis SK1302]
gi|308115778|gb|EFO53309.1| endonuclease III [Streptococcus infantis SK1302]
Length = 209
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRSRHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ +I +G+YR K++ + + L+++FD ++PQT E L L G+GR
Sbjct: 62 TPQAMADASEIEIAKHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVLSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C+
Sbjct: 182 MIYFGRAICHPKNPECE 198
>gi|320528079|ref|ZP_08029244.1| endonuclease III [Solobacterium moorei F0204]
gi|320131427|gb|EFW23992.1| endonuclease III [Solobacterium moorei F0204]
Length = 217
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
I P+ EL + N + L VAV+LSAQ+TDV+VN+ T LF+ +P +
Sbjct: 8 FILEYLQKLHPNAHCELTHRNPYELSVAVILSAQTTDVSVNRVTPALFKAYPSPYDLAKA 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
K ++ YI ++G+YR K++ I+ + ++ +F ++P T+E LT LPGIGRK ANVI++
Sbjct: 68 PTKDVEKYIASLGLYRNKAKQIVGFAQGVVEQFHGEVPHTMEELTTLPGIGRKCANVIMA 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
F IP+I VDTH+ RIS R+GL K+E+ L+R IP H+ ++ GRY+
Sbjct: 128 ECFNIPSIAVDTHVARISRRLGLCYQKDDVEKIERKLMRKIPRDRWIKTHHQMIFFGRYL 187
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C AR P+C C N C ++
Sbjct: 188 CHARNPECYRCPFVNGCHEKQK 209
>gi|319947405|ref|ZP_08021637.1| endonuclease III [Streptococcus australis ATCC 700641]
gi|319746345|gb|EFV98606.1| endonuclease III [Streptococcus australis ATCC 700641]
Length = 209
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P + L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAQPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E + +I +G+YR K++ + + L++ FD ++PQT E L L G+GR
Sbjct: 62 TPQAMAVASEADIAKHISKLGLYRNKAKFLKKCAQQLLDNFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPKSEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|282879466|ref|ZP_06288202.1| endonuclease III [Prevotella buccalis ATCC 35310]
gi|281298414|gb|EFA90847.1| endonuclease III [Prevotella buccalis ATCC 35310]
Length = 238
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 125/208 (60%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I F P EL + + F L+VA LLSAQ TD +N+ T LF+
Sbjct: 23 MTRKERYQYILDYFRKTTPIVTTELEFGSAFQLLVATLLSAQCTDKRINQVTPALFQRYP 82
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M +++ Y+R++ KS +++ ++ +L+++F ++P L +LPG+GR
Sbjct: 83 DARSMAQATPEEVLEYVRSVSYPNAKSRHLVEMAQMLVSDFGGEVPDNTADLVKLPGVGR 142
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ +G I VDTH++R+S+R+GL P TP KVE L++ IP + +AH+
Sbjct: 143 KTANVVQAVWYGKAKIAVDTHVYRVSHRMGLVPQKANTPLKVELELMKYIPEEDVSSAHH 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+LHGRY+C++++P+C+ C +C +
Sbjct: 203 WLLLHGRYICQSQRPKCEKCQFEQICPK 230
>gi|224501306|ref|ZP_03669613.1| endonuclease III (DNA repair) [Listeria monocytogenes FSL R2-561]
Length = 213
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY CKAR P+C +C + LC+ K
Sbjct: 181 MIFFGRYHCKARNPECPTCPLRYLCREGK 209
>gi|312867168|ref|ZP_07727378.1| endonuclease III [Streptococcus parasanguinis F0405]
gi|311097297|gb|EFQ55531.1| endonuclease III [Streptococcus parasanguinis F0405]
Length = 207
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A E + +I +G+YR K++ + + L++ FD K+PQT E L L G+GR
Sbjct: 62 TPQAMAAASEADIAKHISKLGLYRNKAKFLKKCAQQLLDNFDGKVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPKSEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|258648124|ref|ZP_05735593.1| endonuclease III [Prevotella tannerae ATCC 51259]
gi|260852003|gb|EEX71872.1| endonuclease III [Prevotella tannerae ATCC 51259]
Length = 215
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 2/207 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + K+ + EL++ F L+VAV+LSAQ TD VN T LFE
Sbjct: 1 MKKQELFDTVLGTLAPKYGDVETELHFTTPFQLLVAVVLSAQCTDKRVNMITPALFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M ++L YI+++ K++++ L+ +L+ F+ ++P TLE LTRLPG+GR
Sbjct: 61 DAAAMAQATPEELLEYIKSVSYPNSKAKHLAGLAQMLVEAFNGEVPTTLEELTRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++AF + VDTH+FR+S+R+GL P TP KVE +L + IP + +H+
Sbjct: 121 KTANVVQAVAFHKAALAVDTHVFRVSHRLGLVPKTANTPYKVEMALKKYIPEEKVAPSHF 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
WL+LHGRYVC A +P+C C + LCK
Sbjct: 181 WLLLHGRYVCTALRPKCDKCDLRGLCK 207
>gi|302384786|ref|YP_003820608.1| endonuclease III [Clostridium saccharolyticum WM1]
gi|302195414|gb|ADL02985.1| endonuclease III [Clostridium saccharolyticum WM1]
Length = 225
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ ++ ++ L + N + L++AV+LSAQ TD VN T
Sbjct: 2 AKKETKAERQARVIKVLEALDREYGRSYVCYLNHENPWQLLIAVILSAQCTDARVNMVTP 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF D+P+K K+L+ I ++G Y K++NIIS L+ ++ ++P+T+E LT
Sbjct: 62 DLFRKYDSPKKFAQADLKELEKDIHSLGFYHMKAKNIISCCQDLVEKYGGEVPRTMEELT 121
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
L G+GRK ANVI + P+I VDTH+ RIS ++G A + P K+E L++++P H
Sbjct: 122 SLAGVGRKTANVIRGNIYNEPSIVVDTHVKRISRKLGFAREEDPEKIEFELMKVLPKDHW 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ GR +C AR P+C C + LC +
Sbjct: 182 ILWNIQIITLGRSICVARNPKCCQCFLQTLCPSAQ 216
>gi|114798206|ref|YP_760738.1| endonuclease III [Hyphomonas neptunium ATCC 15444]
gi|114738380|gb|ABI76505.1| endonuclease III [Hyphomonas neptunium ATCC 15444]
Length = 254
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 112/188 (59%), Positives = 147/188 (78%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P P EL +VN FTL+VAV LSAQ+TDV VNKAT+ LF +ADTP+KML +GE+ + ++IR
Sbjct: 41 PDPATELEFVNPFTLLVAVALSAQATDVGVNKATRKLFAVADTPEKMLTLGEEGVASHIR 100
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
TIG++R K++N+I+LS +I E+ ++P+T + LT LPG+GRK ANV+++ AFG PTI V
Sbjct: 101 TIGLWRNKAKNVIALSRRIIEEYGGEVPRTRDELTTLPGVGRKTANVVMNEAFGEPTIAV 160
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
DTHIFR+SNR GLAPGKTP+ VE L RI PP+ + AH+WL+LHGRYVCKAR P+C C
Sbjct: 161 DTHIFRVSNRTGLAPGKTPDHVETGLERITPPEFKKGAHHWLILHGRYVCKARTPECWHC 220
Query: 217 IISNLCKR 224
I +LC
Sbjct: 221 AIKDLCDF 228
>gi|268679965|ref|YP_003304396.1| endonuclease III [Sulfurospirillum deleyianum DSM 6946]
gi|268617996|gb|ACZ12361.1| endonuclease III [Sulfurospirillum deleyianum DSM 6946]
Length = 213
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 73/203 (35%), Positives = 111/203 (54%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE E I LF +P EL Y N + L+V+V+LSAQ TD VN T LFE TP
Sbjct: 5 TQKESEMIKALFLEHFPQAVTELNYRNLYELLVSVMLSAQCTDKRVNLITPALFERFPTP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L++ I + + K+ N+I ++ ++ +D +IP + L L G+G+K
Sbjct: 65 FHLAHANLDELKSLIHSCSFFNNKAINLIKMAQKVMETYDGEIPLDEKQLIGLAGVGQKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+V++ + VDTH+FR+++R+GL+ KT K E+ L + K H +VL
Sbjct: 125 AHVVMIEYANANLMAVDTHVFRVAHRLGLSSAKTALKTEEDLTQRF-KKDLATLHQAMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
GRY CKA P C++C + CK
Sbjct: 184 FGRYTCKAINPLCENCFLKAYCK 206
>gi|228996760|ref|ZP_04156397.1| endonuclease III [Bacillus mycoides Rock3-17]
gi|229004434|ref|ZP_04162178.1| endonuclease III [Bacillus mycoides Rock1-4]
gi|228756816|gb|EEM06117.1| endonuclease III [Bacillus mycoides Rock1-4]
gi|228763079|gb|EEM11989.1| endonuclease III [Bacillus mycoides Rock3-17]
Length = 215
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK TK LF+
Sbjct: 1 MLNKTQIRYCLDTMAEMYPEAHCELNHDNPFELVIAVALSAQCTDVLVNKVTKSLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQ IR+IG+YR K++NI L +L+ +++ ++PQ + LT+LPG+GR
Sbjct: 61 TPEDYLNVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLEDYNGEVPQGRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|254455369|ref|ZP_05068798.1| endonuclease III [Candidatus Pelagibacter sp. HTCC7211]
gi|207082371|gb|EDZ59797.1| endonuclease III [Candidatus Pelagibacter sp. HTCC7211]
Length = 217
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 124/204 (60%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + I + + +P+ L + N FTL+V+VLLSAQ TD+NVN TK+++ +
Sbjct: 1 MNEKEKAKNILKILNKIYPAAPVPLKHRNIFTLLVSVLLSAQCTDLNVNNVTKNIYPKYN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + +G KK++N I+ IGI+R K+++I +S L+ + + K+P+T E L +LPG+G
Sbjct: 61 KPEHFVKLGRKKIENLIKKIGIFRIKAKSIYLMSKQLLEKHNGKVPKTFEELEKLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG P VDTHI R++ R GL GK + E+ L RI P H +
Sbjct: 121 KTASVVMSQGFGYPAFAVDTHIHRLAQRWGLTNGKNVVQTEKDLKRIFPKNTWSKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR CKAR+ +C I N C
Sbjct: 181 IYYGREYCKARECYGLTCKICNTC 204
>gi|228990662|ref|ZP_04150627.1| endonuclease III [Bacillus pseudomycoides DSM 12442]
gi|228769188|gb|EEM17786.1| endonuclease III [Bacillus pseudomycoides DSM 12442]
Length = 215
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK TK LF+
Sbjct: 1 MLNKTQIRYCLDTMAEMYPEAHCELNHDNPFELVIAVALSAQCTDVLVNKVTKSLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQ IR+IG+YR K++NI L +L+ +++ ++PQ + LT+LPG+GR
Sbjct: 61 TPEDYLNVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLEDYNGEVPQDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|302385477|ref|YP_003821299.1| endonuclease III [Clostridium saccharolyticum WM1]
gi|302196105|gb|ADL03676.1| endonuclease III [Clostridium saccharolyticum WM1]
Length = 218
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 74/203 (36%), Positives = 113/203 (55%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + I + K Y+ + L+ A++LSAQSTD V + LF+ T
Sbjct: 1 MKKENIRHILEKLDQVYGITKKGFYHNQPWQLLAAIMLSAQSTDKQVEEVLPQLFQRFRT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
++M ++++ IRTIG+Y+ K+ N+ + NEF ++P ++ + L G+GRK
Sbjct: 61 AEQMAEAPLEEIEEAIRTIGLYKNKARNLKKCCGQIANEFGGQVPGDIDKILTLAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A + L+ A+GIP I VDTH+FRIS R+G A GK P +VE L RI+P H ++ L+
Sbjct: 121 TATLFLADAYGIPGITVDTHVFRISRRLGWASGKNPAQVEMELQRILPKDHWNRINFQLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
HGR VC ARK C C++ C
Sbjct: 181 YHGREVCTARKANCGECMVREWC 203
>gi|322374552|ref|ZP_08049066.1| endonuclease III [Streptococcus sp. C300]
gi|321280052|gb|EFX57091.1| endonuclease III [Streptococcus sp. C300]
Length = 209
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 114/197 (57%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFCNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M E ++ ++I +G+YR K++ + + L+ +FD ++PQT E L L G+GR
Sbjct: 62 TPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLEDFDGQVPQTREELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|261414834|ref|YP_003248517.1| endonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261371290|gb|ACX74035.1| endonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302325463|gb|ADL24664.1| endonuclease III [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 210
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 114/202 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +PSP L + + FTL+VAV+LSAQ TD+ VN+ T LF+ A+
Sbjct: 1 MNKATKIKFISDKLDELYPSPPIPLDFTSPFTLLVAVVLSAQCTDIRVNQVTAVLFKEAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP KM+ +G ++ I+ G + KS NI LS L+ +F ++P T E L LPG+G
Sbjct: 61 TPAKMIKLGVDRIAEIIKPCGFFNTKSVNIFKLSQALVEKFKGEVPHTFEELESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+VI+S F +P VDTHI R++ R GL+ G + K E L + P + H +
Sbjct: 121 KTASVIMSHIFKLPAFPVDTHIHRLAERWGLSDGSSVEKTEADLKKAFPKEEWEKRHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ GR CKAR + + C I +
Sbjct: 181 IYFGRNYCKARGHKDEECPICS 202
>gi|257866142|ref|ZP_05645795.1| endonuclease III [Enterococcus casseliflavus EC30]
gi|257872472|ref|ZP_05652125.1| endonuclease III [Enterococcus casseliflavus EC10]
gi|257875774|ref|ZP_05655427.1| endonuclease III [Enterococcus casseliflavus EC20]
gi|257800076|gb|EEV29128.1| endonuclease III [Enterococcus casseliflavus EC30]
gi|257806636|gb|EEV35458.1| endonuclease III [Enterococcus casseliflavus EC10]
gi|257809940|gb|EEV38760.1| endonuclease III [Enterococcus casseliflavus EC20]
Length = 218
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 124/209 (59%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ + +P GEL N F L++AV+LSAQ+TDV+VNK T LFE
Sbjct: 1 MISKEKTMTAIEIMYEMFPEAHGELVSKNAFELLIAVILSAQATDVSVNKVTPALFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + + + I++IG+YR K++NI + + L+ F ++PQT E L LPG+GR
Sbjct: 61 TPQALSEAPLEDIIEKIKSIGLYRNKAKNIKACASELLLRFGGEVPQTREDLISLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R+S R+ + +VEQ+L++ IP H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDANVLEVEQTLMKKIPDTLWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + +C+ K
Sbjct: 181 LIFFGRYHCTARAPKCEVCPLLTMCQEGK 209
>gi|289450846|ref|YP_003474686.1| endonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185393|gb|ADC91818.1| endonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 248
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN-HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ + + L + + L+VA +L+AQ TD VN T LF TP
Sbjct: 38 KQRAAAVWERLVAVYGKTECTLDAKDDAWQLLVAAILAAQCTDARVNLVTPGLFAAFPTP 97
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A ++ YI + G++ K++ I + L ++F +PQT L LPG+GRK
Sbjct: 98 RDFAAATPAAIEPYISSCGLFHNKAKAIFGAAVKLESDFAGCVPQTEAELLSLPGVGRKI 157
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
AN+IL FG P I VDTH R+S +G K P KVE+ L +I+P H +++V
Sbjct: 158 ANLILGEVFGQPAIVVDTHCGRLSRLLGFTTAKDPVKVEKDLRKILPKSHWIGWGHYMVE 217
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
HGR +C AR+P CQ+C +++LC
Sbjct: 218 HGRKICSARRPACQNCFLNDLCAY 241
>gi|312194230|ref|YP_004014291.1| endonuclease III [Frankia sp. EuI1c]
gi|311225566|gb|ADP78421.1| endonuclease III [Frankia sp. EuI1c]
Length = 271
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 102/194 (52%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
P + L + LIVA +LSAQ TD VN+ T +F + +L
Sbjct: 56 LGEVHPDARIALNFTTPLELIVATVLSAQCTDKKVNEVTPTVFARYPSAAAYAGADRAEL 115
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +R G +R K+ ++I L L++ F ++P+TLE L LPG+GRK ANV+L AF
Sbjct: 116 ETILRPTGFFRAKANSVIGLGAALVDRFGGEVPRTLEELVTLPGVGRKTANVVLGHAFDT 175
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P I VDTH+ R+S R GL P KVE L +I K A ++ HGR +C AR+P
Sbjct: 176 PGITVDTHVGRLSRRFGLTTQDDPVKVEADLAALIERKDWTIASDRMIFHGRRICHARRP 235
Query: 212 QCQSCIISNLCKRI 225
C +C ++ LC
Sbjct: 236 ACGACAVAKLCPSY 249
>gi|288799887|ref|ZP_06405346.1| endonuclease III [Prevotella sp. oral taxon 299 str. F0039]
gi|288333135|gb|EFC71614.1| endonuclease III [Prevotella sp. oral taxon 299 str. F0039]
Length = 221
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I F + P EL + F LIVA LLSAQ TD +N+ T LF
Sbjct: 6 MTRKERYEYILAYFRKEMPITTTELQFTTAFELIVATLLSAQCTDKRINQVTPELFAAYP 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M ++ YIR++ K+++++ ++ IL+ +F+ ++P+ E L +LPG+GR
Sbjct: 66 TPLAMSKAEVYEVFEYIRSVSYPNAKAKHLVEMAKILVEQFNGEVPEKREDLMKLPGVGR 125
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG T+ VDTH++R+S+R+GL P TP KVE++L + IP + NAH+
Sbjct: 126 KTANVVQAVWFGKATMAVDTHVYRVSHRMGLVPKTANTPLKVEETLYKYIPAEDVPNAHH 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVC +R PQC C+ +C ++
Sbjct: 186 WLILHGRYVCLSRTPQCAKCVFDKICPKL 214
>gi|321474142|gb|EFX85108.1| hypothetical protein DAPPUDRAFT_314361 [Daphnia pulex]
Length = 486
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 83/221 (37%), Gaps = 15/221 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNH----------FTLIVAVLLSAQSTDVNVNKATK 71
+E+ + + K +L + + ++++V+ ++ Q+ V
Sbjct: 34 EEEIRNLREKLINWYDINKRDLQWRDLAKHIDPNIRGYSVLVSEIMLQQTQVATVKSYYS 93
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + +++ +G Y + + I+ + +
Sbjct: 94 KWIEKWPDLTALSKATLEEVNTLWSGLGYYSRGKRLHEAACKIVHEMDGTMPQKAEQLQK 153
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRII 186
+LPG+G A I S+AF VD ++ R+ R+ T K + + ++
Sbjct: 154 QLPGVGPYTAAAIGSIAFNERVGLVDGNVIRVITRLCSIGADTSKKSVVDVIWKLSNEMV 213
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + + ++ G VC + P CQSC IS +C+ K+
Sbjct: 214 DPERPGDFNQGMMELGATVCTPKSPLCQSCPISLMCRAYKR 254
>gi|315221912|ref|ZP_07863823.1| endonuclease III [Streptococcus anginosus F0211]
gi|315188878|gb|EFU22582.1| endonuclease III [Streptococcus anginosus F0211]
Length = 207
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+VAV+LSAQ+TD VN T LF++
Sbjct: 2 VLSKKRARKVIEEIIALFPDAKPSLNFTNHFELLVAVMLSAQTTDAAVNIVTPALFKVYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M A E ++ +YI +G+YR K++ + + L++ FD ++P T + L L G+GR
Sbjct: 62 TPREMAAASESEIASYIARLGLYRNKAKFLKKCAQQLLDNFDGQVPHTRQELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VEQ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEQRVMEVLPKNEWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C R P+C
Sbjct: 182 MICFGREICHPRNPECDQ 199
>gi|331002520|ref|ZP_08326038.1| endonuclease III [Lachnospiraceae oral taxon 107 str. F0167]
gi|330410336|gb|EGG89770.1| endonuclease III [Lachnospiraceae oral taxon 107 str. F0167]
Length = 209
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKG-ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
T K LE I + + K L Y + L+ A +LSAQ TD VN T+ L++ D
Sbjct: 1 MTDKRLERILAKLDETYGTEKIIYLEYNTPWQLLFATILSAQCTDARVNMVTRDLYKKYD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +K + ++++ I +IG Y K++N+I+ + L+++F ++P L+ L LPG+GR
Sbjct: 61 SLEKFASAKLEEMEKDIHSIGFYHNKAKNLIACARKLLSDFGGEVPSELKDLLTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI F +P+I VDTH+ RI+ ++G P K+E L+ I+P H + L
Sbjct: 121 KTANVIRGNIFDMPSIVVDTHVKRITKKLGFTQSDDPVKIEFELMEILPKDHWIVWNTDL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GR +C AR+ +C C + C K
Sbjct: 181 ITLGRTICIARREKCDICFLREDCPSAK 208
>gi|323351080|ref|ZP_08086737.1| endonuclease III [Streptococcus sanguinis VMC66]
gi|322122804|gb|EFX94513.1| endonuclease III [Streptococcus sanguinis VMC66]
Length = 209
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYS 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+PQ+M A E + YI +G+YR K++ + + L+++FD ++PQT L L G+GR
Sbjct: 62 SPQEMAAASEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FG+P VDTH+ RI + TP +VE+ ++ ++PP+ AH
Sbjct: 122 KTANVVMSVGFGVPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQ 214
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECD 198
>gi|302871735|ref|YP_003840371.1| endonuclease III [Caldicellulosiruptor obsidiansis OB47]
gi|302574594|gb|ADL42385.1| endonuclease III [Caldicellulosiruptor obsidiansis OB47]
Length = 202
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 118/199 (59%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P PK L Y + L++A +L+AQSTD VNK T LF+ T +
Sbjct: 1 MIKELLKIYPQPKCTLNYNKPYELLIATILAAQSTDERVNKITAELFKKYPTLESFAEAD 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+L+N I+ +G Y+ K+++I + IL+ +++ +P T+E L +L G+GRK ANVI++
Sbjct: 61 LSELENDIKPVGFYKNKAKSIKETARILVEKYNGTLPTTIEELVKLKGVGRKTANVIMAN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+GIP+I VDTH R+SNR+GL K K+E L I+ P+ +V HGR VCK
Sbjct: 121 IYGIPSIIVDTHCMRLSNRLGLVNSKDATKIELELRDIVEPQLYTIFSNLMVYHGRAVCK 180
Query: 208 ARKPQCQSCIISNLCKRIK 226
A KP+C+ C I ++CK K
Sbjct: 181 AIKPKCEVCTIKDVCKYFK 199
>gi|313681750|ref|YP_004059488.1| endonuclease iii [Sulfuricurvum kujiense DSM 16994]
gi|313154610|gb|ADR33288.1| endonuclease III [Sulfuricurvum kujiense DSM 16994]
Length = 215
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 114/205 (55%), Gaps = 2/205 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE+E I ++ EL Y N + L++AV LSAQ TD VN T LF+ TP
Sbjct: 5 TRKEIEAIKVALLERYSDAVTELTYSNAYELVIAVALSAQCTDKRVNLITPALFKAYPTP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++++ I++ + K+ N+I+++ +I + +IP + L L G+G+K
Sbjct: 65 EALAHADIEEVKALIQSCSFFNNKAINLIAMAKRVIEVYGGEIPMDEKELVTLAGVGQKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+V+L + VDTH+FR+S+R+GL+ + E++L++ + + H LVL
Sbjct: 125 AHVVLIEYTQANLMAVDTHVFRVSHRLGLSDDLSAVATEETLVKKF-KTNLHQLHQGLVL 183
Query: 201 HGRYVCKARKPQCQ-SCIISNLCKR 224
GRY+C A+ P+C C IS LCK
Sbjct: 184 FGRYICTAKNPKCDTECFISELCKS 208
>gi|302346414|ref|YP_003814712.1| endonuclease III [Prevotella melaninogenica ATCC 25845]
gi|302150601|gb|ADK96862.1| endonuclease III [Prevotella melaninogenica ATCC 25845]
Length = 215
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTRKERYDYALSYFRKNVGHVSTELNFGSAFQLLCATLLSAQCTDKRINAITPELFRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M ++ Y++++ K+++++ +S +L+ +FD ++P L LPG+GR
Sbjct: 61 DAKAMAEATADEIFEYVKSVSYPNSKAKHLVEMSKMLVEKFDGEVPSDPNALVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP + +AH+
Sbjct: 121 KTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMKNIPTEEVSDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
W++LHGRYVCK+ KP C+ C ++C ++
Sbjct: 181 WILLHGRYVCKSAKPDCEHCPFDDICPKL 209
>gi|157736874|ref|YP_001489557.1| endonuclease III [Arcobacter butzleri RM4018]
gi|157698728|gb|ABV66888.1| endonuclease III [Arcobacter butzleri RM4018]
Length = 214
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T ++++ I F + EL Y N + L++A++LSAQ TD VN T LFE +
Sbjct: 5 TKEDIQIIKEAFLEHYKEAVTELNYKNDYELLIAIILSAQCTDKRVNIITPALFEKYPSV 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ ++ +++ + K++NI+ ++ ++ +D IP + L +L G+G K
Sbjct: 65 KELAVADLGDVKELLKSCSFFNNKAQNIVKMAQSVVMNYDGNIPHNQKELMKLAGVGNKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV + G + VDTH+FR+S+R+GL+ K E L++ + + H +VL
Sbjct: 125 ANVFMIEFEGANLMAVDTHVFRVSHRLGLSDAKNVTLTEADLVKKL-KGDLHIFHQAMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GRY+CKA KP+C C +CK
Sbjct: 184 FGRYICKAVKPECDKCYFPQVCKS 207
>gi|302023712|ref|ZP_07248923.1| endonuclease III [Streptococcus suis 05HAS68]
Length = 207
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LFE
Sbjct: 2 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFEAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L++ D +PQT E L L G+GR
Sbjct: 62 TPQAMAAAQVKDIEPYISRLGLYRNKAKFLKECAQQLLDRHDGIVPQTREELEALAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + E+ ++ ++PP+ AH
Sbjct: 122 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETEKRVMEVLPPELWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR VC + P+C+
Sbjct: 182 MIYFGREVCHPKNPECEK 199
>gi|229084653|ref|ZP_04216921.1| endonuclease III [Bacillus cereus Rock3-44]
gi|228698676|gb|EEL51393.1| endonuclease III [Bacillus cereus Rock3-44]
Length = 215
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK TK LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELNHDNPFELVIAVALSAQCTDVLVNKVTKSLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + ++LQ IR+IG+YR K++NI L +L+ +++ ++PQ + LT+LPG+GR
Sbjct: 61 TPEDYLNVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLEDYNGEVPQDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P + H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|266619530|ref|ZP_06112465.1| endonuclease III [Clostridium hathewayi DSM 13479]
gi|288868941|gb|EFD01240.1| endonuclease III [Clostridium hathewayi DSM 13479]
Length = 217
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 22 PKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + ++ L + + L++AV++SAQ TD VN T LF+ D+
Sbjct: 11 KARVDHVLAALDQEYGTEYVCYLNHETPWQLLIAVIMSAQCTDARVNIVTADLFKKYDSI 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K K+L+ I +IG Y K++NIIS L+ F ++P+T+E LT L G+GRK
Sbjct: 71 EKFANADLKELEKDIHSIGFYHMKAKNIISCCQGLLERFGGQVPRTIEELTSLAGVGRKT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANVI + P+I VDTH+ RIS ++G A + P K+E L++++P +H + ++
Sbjct: 131 ANVIRGNIYHEPSIVVDTHVKRISRKLGFAKAEDPEKIEMELMKVLPKEHWILWNIQIIT 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GR +C AR P+C+ C + C +Q
Sbjct: 191 LGRSICFARSPKCKECFLREYCPSAEQ 217
>gi|253751599|ref|YP_003024740.1| endonuclease III [Streptococcus suis SC84]
gi|253753501|ref|YP_003026642.1| endonuclease III [Streptococcus suis P1/7]
gi|253755674|ref|YP_003028814.1| endonuclease III [Streptococcus suis BM407]
gi|251815888|emb|CAZ51501.1| putative endonuclease III [Streptococcus suis SC84]
gi|251818138|emb|CAZ55933.1| putative endonuclease III [Streptococcus suis BM407]
gi|251819747|emb|CAR45620.1| putative endonuclease III [Streptococcus suis P1/7]
Length = 207
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L+ + +PQT E L L G+GR
Sbjct: 62 TPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERHNGIVPQTREELEALAGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + E+ ++ ++PP+ AH
Sbjct: 122 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETEKRVMEVLPPELWLPAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR VC + P+C+
Sbjct: 182 MIYFGREVCHPKNPECEK 199
>gi|229172284|ref|ZP_04299848.1| endonuclease III [Bacillus cereus MM3]
gi|228611272|gb|EEK68530.1| endonuclease III [Bacillus cereus MM3]
Length = 215
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG++R K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLFRNKAKNIQKLCQMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKALMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|163939463|ref|YP_001644347.1| endonuclease III [Bacillus weihenstephanensis KBAB4]
gi|229010956|ref|ZP_04168152.1| endonuclease III [Bacillus mycoides DSM 2048]
gi|229132455|ref|ZP_04261309.1| endonuclease III [Bacillus cereus BDRD-ST196]
gi|163861660|gb|ABY42719.1| endonuclease III [Bacillus weihenstephanensis KBAB4]
gi|228651161|gb|EEL07142.1| endonuclease III [Bacillus cereus BDRD-ST196]
gi|228750356|gb|EEM00186.1| endonuclease III [Bacillus mycoides DSM 2048]
Length = 215
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDVLVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG++R K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLFRNKAKNIQKLCRMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYYCKAQRPQCEECRLLEICREGKK 210
>gi|88803253|ref|ZP_01118779.1| putative endonuclease [Polaribacter irgensii 23-P]
gi|88780819|gb|EAR11998.1| putative endonuclease [Polaribacter irgensii 23-P]
Length = 217
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 108/191 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + K+P L + + FTL++AVLLSAQ TDV VNK T LF A+
Sbjct: 1 MNKKEKVQFVIDTLEEKYPEIPIPLDHKDPFTLLIAVLLSAQCTDVRVNKITPILFAKAN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ IR G+ KS+ I LS ILI +++ +PQ+ EGL LP +G
Sbjct: 61 NPFDMVKMSVAEIKAIIRPCGLSPMKSKGIHGLSKILIEKYNGAVPQSFEGLEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V++S AFG+P VDTHI R+ R L GK+ + E+ R+ P + + H +
Sbjct: 121 KTAGVVMSQAFGVPAFPVDTHIHRLLWRWNLTNGKSVKQTEKDAKRLFPEELWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREFSPAR 191
>gi|255321568|ref|ZP_05362726.1| endonuclease III [Campylobacter showae RM3277]
gi|255301424|gb|EET80683.1| endonuclease III [Campylobacter showae RM3277]
Length = 211
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 113/204 (55%), Gaps = 1/204 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++ I LF + EL + + + L+V V+LSAQ TD VN T LFE
Sbjct: 1 MRTKKDINAIKNLFLENFKDAGSELKFRSLYELLVCVMLSAQCTDKRVNLITPSLFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ I + + K+EN+I ++ +++EFD +IP T + L L G+G+
Sbjct: 61 DVASLAQANLGSVKTLINSCSFFNNKAENLIKMAKSVMSEFDGEIPTTEKELMSLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L FG + VDTH+FR+++R+GL+ GKTP VE L + H +
Sbjct: 121 KTAHVVLIEHFGSNLMAVDTHVFRVAHRLGLSKGKTPEAVELDLTKAF-KTELNTLHQAM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
VL GRY CKA KP C+ C ++ LC
Sbjct: 180 VLFGRYTCKAIKPNCKECFLNELC 203
>gi|229016903|ref|ZP_04173831.1| endonuclease III [Bacillus cereus AH1273]
gi|229023109|ref|ZP_04179623.1| endonuclease III [Bacillus cereus AH1272]
gi|229058283|ref|ZP_04196670.1| endonuclease III [Bacillus cereus AH603]
gi|229166493|ref|ZP_04294249.1| endonuclease III [Bacillus cereus AH621]
gi|228617067|gb|EEK74136.1| endonuclease III [Bacillus cereus AH621]
gi|228720054|gb|EEL71640.1| endonuclease III [Bacillus cereus AH603]
gi|228738255|gb|EEL88737.1| endonuclease III [Bacillus cereus AH1272]
gi|228744464|gb|EEL94538.1| endonuclease III [Bacillus cereus AH1273]
Length = 215
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG++R K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLFRNKAKNIQKLCRMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYYCKAQRPQCEECRLLEICREGKK 210
>gi|298208419|ref|YP_003716598.1| endonuclease III/Nth [Croceibacter atlanticus HTCC2559]
gi|83848342|gb|EAP86211.1| endonuclease III/Nth [Croceibacter atlanticus HTCC2559]
Length = 218
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 114/191 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P+ L + + +TL++AVL+SAQSTDV VNK T LFE+AD
Sbjct: 1 MTKAEKVQFVIDKLQELYPTIPIPLDHKDPYTLLIAVLMSAQSTDVRVNKITPLLFEVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P KM+ + +++++ I+ +G+ K++ I LS ILI+++D K+P E L LP +G
Sbjct: 61 NPYKMVKLSVEEIRDIIKPVGLSPMKAKGIHGLSEILIDKYDGKVPADFEALESLPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R L GK + E+ R+ P + + H +
Sbjct: 121 KTASVVMSQAFGIPAFPVDTHIHRLMYRWNLTNGKNVVQTEKDAKRLFPKELWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|304314918|ref|YP_003850065.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
gi|302588377|gb|ADL58752.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
Length = 215
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++++ I + + + +++ +LS ++ D N ++AT LF
Sbjct: 1 MVSIRDIDRIMEGLRSLY--SLRVFEDRDPYRVLIRTILSQRTRDENTDEATARLFSEYP 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + +KL+ +R G Y K+ I +S IL+ E+ ++P ++ L +LPG+GR
Sbjct: 59 TMEDVAYAPVEKLEQLVRKAGFYHVKARRIREVSRILLEEYGGRVPDDIDELLKLPGVGR 118
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN +L AF P + VDTH+ RISNRIGL +TP + E+ L+ +IP K+ + +
Sbjct: 119 KTANCVLVYAFNKPVVPVDTHVHRISNRIGLVNTRTPEETERVLMEVIPRKYWIELNDLM 178
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V G+ +C+ P+ + C I++ C K
Sbjct: 179 VQFGQDICRPVGPRHEECPIADECDYYK 206
>gi|332686521|ref|YP_004456295.1| endonuclease III [Melissococcus plutonius ATCC 35311]
gi|332370530|dbj|BAK21486.1| endonuclease III [Melissococcus plutonius ATCC 35311]
Length = 217
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ E + +P+ KGEL N F ++AV LSAQ+TDV+VNK T LF
Sbjct: 1 MLSKEKTMEAINIMYEMFPNAKGELNRKNPFEYLIAVSLSAQTTDVSVNKVTPALFAAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + + + I+TIG+YR K++NI + + L+ FD+++PQT + L LPG+G+
Sbjct: 61 TPEALANAPIEAIIEKIKTIGLYRNKAKNIKACAEQLVERFDSQVPQTHKELMSLPGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+++ F P++ VDTH+ R+S R + ++VE++L + +P H+
Sbjct: 121 KTANVVMADMFNEPSLAVDTHVERVSKRLRFCSLKANVSQVEETLKKKVPKHLWIKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C AR P+C C + +C K+
Sbjct: 181 LIFFGRYHCFARNPKCPVCPLLYMCPEGKK 210
>gi|255027056|ref|ZP_05299042.1| endonuclease III (DNA repair) [Listeria monocytogenes FSL J2-003]
Length = 213
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ LA+ ++L IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GR
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FG+P I VDTH+ RIS R+G+ + +VE++L R +P + +AH++
Sbjct: 121 KTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHY 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY CKAR P+C +C + LC+ K
Sbjct: 181 MIFFGRYHCKARNPECPTCPLLYLCREGK 209
>gi|257420100|ref|ZP_05597094.1| A/G-specific adenine glycosylase mutY [Enterococcus faecalis T11]
gi|257161928|gb|EEU91888.1| A/G-specific adenine glycosylase mutY [Enterococcus faecalis T11]
Length = 394
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|237751971|ref|ZP_04582451.1| endonuclease III [Helicobacter winghamensis ATCC BAA-430]
gi|229376538|gb|EEO26629.1| endonuclease III [Helicobacter winghamensis ATCC BAA-430]
Length = 218
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E++EI LF + + EL + N F L++AV+LSAQ TD VN T LF+ TPQ +
Sbjct: 12 EIQEIKALFLEHFKGARTELVFSNDFELLIAVMLSAQCTDKRVNLITPALFKKFPTPQAL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ I+T + K++N+ +++ + +++ +IP E L LPG+G+K ANV
Sbjct: 72 SLADLDSIKECIKTCSFFNNKAKNLKAMAKEVYEKYNGEIPLDREILKTLPGVGQKTANV 131
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L + I VDTH+FR+S+R+GL+ TP E L +I + H +VL GR
Sbjct: 132 VLIESKEANFIAVDTHVFRVSHRLGLSFATTPLATEADLTKIF-KDNLATLHQAMVLFGR 190
Query: 204 YVCKARKPQCQSCIISNLCKR 224
Y CKA PQCQ C +++LCK
Sbjct: 191 YTCKAINPQCQECFLNHLCKS 211
>gi|75760395|ref|ZP_00740439.1| Endonuclease III [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218896576|ref|YP_002444987.1| endonuclease III [Bacillus cereus G9842]
gi|74492106|gb|EAO55278.1| Endonuclease III [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218541026|gb|ACK93420.1| endonuclease III [Bacillus cereus G9842]
gi|326939264|gb|AEA15160.1| endonuclease III [Bacillus thuringiensis serovar chinensis CT-43]
Length = 215
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK T++LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPSDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|229096138|ref|ZP_04227111.1| endonuclease III [Bacillus cereus Rock3-29]
gi|229102250|ref|ZP_04232959.1| endonuclease III [Bacillus cereus Rock3-28]
gi|229115094|ref|ZP_04244504.1| endonuclease III [Bacillus cereus Rock1-3]
gi|228668234|gb|EEL23666.1| endonuclease III [Bacillus cereus Rock1-3]
gi|228681151|gb|EEL35319.1| endonuclease III [Bacillus cereus Rock3-28]
gi|228687098|gb|EEL41003.1| endonuclease III [Bacillus cereus Rock3-29]
Length = 215
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 LIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|229828278|ref|ZP_04454347.1| hypothetical protein GCWU000342_00336 [Shuttleworthia satelles DSM
14600]
gi|229792872|gb|EEP28986.1| hypothetical protein GCWU000342_00336 [Shuttleworthia satelles DSM
14600]
Length = 300
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 4 SKKSDSYQGNSPLGCL---YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
KK+D + +P + +P + L + + + L++++ L+AQ
Sbjct: 67 RKKADHKKELTPAQKRDLDRRRELALTCIDRLKRIYPDTRTTLTFADAWQLLISLRLAAQ 126
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
TD V++ T L+ + T + + + ++ + G+ K+ +I + +L +
Sbjct: 127 CTDKRVDQVTPGLYAVYPTVEAISQAPVEAIEKIVHPCGLGPSKARDIKACMTMLHEVYQ 186
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVE 179
+++P T+E L RLPG+GRK AN+IL FG P + DTH R+SNRIGL P KVE
Sbjct: 187 DRVPDTMEELLRLPGVGRKSANLILGDVFGKPAVVTDTHCIRLSNRIGLVTDIKEPAKVE 246
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L +++P + LV HGR VC AR P+C++CI++++C +
Sbjct: 247 KELWKVLPDAEANQFCHRLVDHGRAVCMARSPRCEACILNDVCAFGQ 293
>gi|115378817|ref|ZP_01465958.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|310822146|ref|YP_003954504.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|115364173|gb|EAU63267.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|309395218|gb|ADO72677.1| Endonuclease III [Stigmatella aurantiaca DW4/3-1]
Length = 213
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + P + EL + F L+VA LL+AQ TD VN+ T LF+
Sbjct: 1 MVPAQRIPPLLQQLRQAHPDARYELNWTTPFELLVATLLAAQCTDERVNRVTATLFQKYQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ L+ +R G Y++K++ + ++S L+ F ++PQ+LE L LPG+ R
Sbjct: 61 GPQAFAQADTGALEEDLRPTGFYKQKAKAVQTMSRELLARFGGEVPQSLEQLVTLPGVAR 120
Query: 139 KGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ AF +P+ + VDTH+ R+S R+GL K P +EQ L+R++P
Sbjct: 121 KTANVVLNTAFQLPSGVIVDTHVARVSQRLGLTQKKKPEDIEQELMRLVPQDQWTFFGPA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
+VLHGRY C ARKPQC +C + C +I
Sbjct: 181 MVLHGRYTCTARKPQCGACPMVAFCPKI 208
>gi|256616791|ref|ZP_05473637.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis ATCC
4200]
gi|307276945|ref|ZP_07558055.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX2134]
gi|256596318|gb|EEU15494.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis ATCC
4200]
gi|306506368|gb|EFM75528.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX2134]
gi|315032558|gb|EFT44490.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0017]
gi|315143900|gb|EFT87916.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX2141]
Length = 394
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|325270961|ref|ZP_08137548.1| endonuclease III [Prevotella multiformis DSM 16608]
gi|324986758|gb|EGC18754.1| endonuclease III [Prevotella multiformis DSM 16608]
Length = 231
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 122/213 (57%), Gaps = 2/213 (0%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + + F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 15 RKMTRKERYTYVLDYFRKHTGHVSTELMFGSAFQLLCATLLSAQCTDKRINAITPELFRH 74
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ M +++ Y++++ K+++++ +S +L+ +F ++P LT LPG+
Sbjct: 75 YPDAKTMAKATAEEVFGYVKSVSYPNAKAKHLVEMSKMLVEQFGGEVPSDPIALTMLPGV 134
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNA 194
GRK ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP + +A
Sbjct: 135 GRKTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTADTPRKVEDYLMKNIPTEEVSDA 194
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+W++LHGRYVCK+ KP C+ C +C ++ +
Sbjct: 195 HHWILLHGRYVCKSAKPDCEHCPFDAICPKLMK 227
>gi|148269689|ref|YP_001244149.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170288365|ref|YP_001738603.1| endonuclease III [Thermotoga sp. RQ2]
gi|281411600|ref|YP_003345679.1| endonuclease III [Thermotoga naphthophila RKU-10]
gi|147735233|gb|ABQ46573.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170175868|gb|ACB08920.1| endonuclease III [Thermotoga sp. RQ2]
gi|281372703|gb|ADA66265.1| endonuclease III [Thermotoga naphthophila RKU-10]
Length = 213
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EE+ ++P E + F ++++ +LS ++ D N KA+K LFE+ TPQ++
Sbjct: 2 IEELAREIVKRFPRNHKE---TDPFRVLISTVLSQRTRDENTEKASKKLFEVYRTPQELA 58
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ L N I+ G+YR+K+ I+ +S IL+ + ++P +LE L +LPG+GRK AN++
Sbjct: 59 KAKPEDLYNLIKESGMYRQKAARIVEISRILVERYGGRVPDSLEELLKLPGVGRKTANIV 118
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + F P + VDTH+ RISNR+G +TP + E++L +++P + +V GR
Sbjct: 119 LWVGFRKPALAVDTHVHRISNRLGWVKTRTPEETEEALKKLLPEDLWGPINGSMVEFGRR 178
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+CK + P C+ C + N C+ ++
Sbjct: 179 ICKPQNPLCEECFLKNHCEFYRR 201
>gi|89890725|ref|ZP_01202234.1| endonuclease III [Flavobacteria bacterium BBFL7]
gi|89516870|gb|EAS19528.1| endonuclease III [Flavobacteria bacterium BBFL7]
Length = 219
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 107/191 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +P L + + +TL++AVL+SAQSTDV VN+ T LFE AD
Sbjct: 1 MNKEEKVNFIINKLEEFYPQIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ I+ +G+ K++ I LSH++I+ D +PQT E L +P +G
Sbjct: 61 NPYDMIRMSIDEIREIIKPVGLSPMKAKGIHGLSHMIIDLHDGVVPQTYEELEAMPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V+LS AFGIP VDTHI R+ R L GK + E+ R+ P + + H +
Sbjct: 121 KTAAVVLSQAFGIPAFPVDTHIHRLMYRWNLTNGKNVVQTEKDAKRLFPEEKWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|295107016|emb|CBL04559.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Gordonibacter pamelaeae 7-10-1-b]
Length = 220
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 127/216 (58%), Gaps = 5/216 (2%)
Query: 14 SPLGCLY-TPKELEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATK 71
P + + E+ + +P+ + L+ + + F L +AVLLSAQ+TD VNK T
Sbjct: 1 MPRETMTAKRERTLEVARRMNEHYPAAECALHYWGDPFRLTIAVLLSAQTTDKGVNKVTP 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L+E TP + + + +++ IRTIG + K+ N+I + +++ ++ +IP+ ++ L
Sbjct: 61 KLWERYPTPADLASADVRDVEDIIRTIGFFHTKAANVIKCAQMVVTDYGGEIPRDIDELQ 120
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPP 188
+LPG+GRK ANV+L+ AFGI I VDTH+FRI++R+ A TP K E +LL++ P
Sbjct: 121 KLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHRLKFAGPSADTPAKTETALLKLYPR 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ ++ VL GR C AR P+C C I +LC
Sbjct: 181 EYWGPINHQWVLFGRETCIARSPKCGECFICDLCPS 216
>gi|296272438|ref|YP_003655069.1| endonuclease III [Arcobacter nitrofigilis DSM 7299]
gi|296096612|gb|ADG92562.1| endonuclease III [Arcobacter nitrofigilis DSM 7299]
Length = 214
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T K++E I F K+ EL Y N F L++A++LSAQ TD VN T LFE TP
Sbjct: 5 TKKDIEIIKEAFVEKYSDAVTELSYKNDFELLIAIILSAQCTDKRVNIITPALFEKYPTP 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++++ +++ + KS+NII ++ ++ IP + L +L G+G K
Sbjct: 65 FDLAEASLDEVKDLLKSCSFFNNKSQNIIKMARSVVELHGGDIPHDTKALMKLAGVGNKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV + A G + VDTH+FR+S+R+GL+ GKT + E+ L++ + + H +VL
Sbjct: 125 ANVFMIEAEGANLMAVDTHVFRVSHRLGLSDGKTVEQTEEHLVKKL-KGDLHIFHQAMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
GRY CKA KP+C +C+ ++CK
Sbjct: 184 FGRYTCKAVKPECDNCLFPHVCK 206
>gi|154503500|ref|ZP_02040560.1| hypothetical protein RUMGNA_01324 [Ruminococcus gnavus ATCC 29149]
gi|153795600|gb|EDN78020.1| hypothetical protein RUMGNA_01324 [Ruminococcus gnavus ATCC 29149]
Length = 213
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + EI +P L Y + + L+V V L+AQ TD VN K L+
Sbjct: 1 MTKKQLALEIIERLRTAYPDADCTLDYDHSEAWKLLVGVRLAAQCTDERVNIVVKDLYAK 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ ++++ +R G+ + K+ +I + IL +E+ ++P + L +LPG+
Sbjct: 61 FPDVNALAEADPQEIEAIVRPCGLGKSKARDISACMRILRDEYHGEVPDDFDALLKLPGV 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAH 195
GRK AN+I+ FG P I DTH R+ NR+GL G P KVE +L +IIPP+ +
Sbjct: 121 GRKSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKIIPPEEGSSFC 180
Query: 196 YWLVLHGRYVCKARK-PQCQSCIISNLCKR 224
+ LV HGR +C AR P C C + ++CK+
Sbjct: 181 HRLVYHGREICTARTAPYCDRCCLFDICKK 210
>gi|124023464|ref|YP_001017771.1| endonuclease [Prochlorococcus marinus str. MIT 9303]
gi|123963750|gb|ABM78506.1| putative endonuclease [Prochlorococcus marinus str. MIT 9303]
Length = 217
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 3/205 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I + +P P LY+ + FTL++AV+LSAQ TD VN+ T LFE A
Sbjct: 1 MRKHQRAETIMRRLNEHYPDPAIPLYHHDDFTLLIAVVLSAQCTDKKVNEVTVSLFEHAQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M +GE K+ IR +G+ ++K++NI LS I++ F + +PQ + L LPG+G
Sbjct: 61 TPEEMYQLGEVKILTMIRQLGLSKQKAKNIHRLSGIIVQRFHSSVPQNFDDLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+PT VDTHI R++ R GL+ G + + E+ L ++ P H +
Sbjct: 121 KTASVVMAQAFGVPTFPVDTHIHRLAQRWGLSNGSSVVQTEKDLKKLFPKSAWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ +GR C AR +C +LC+
Sbjct: 181 IYYGRENCSARGCDGTTC---DLCR 202
>gi|15643134|ref|NP_228177.1| endonuclease III [Thermotoga maritima MSB8]
gi|8134433|sp|Q9WYK0|END3_THEMA RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|4980869|gb|AAD35453.1|AE001716_16 endonuclease III [Thermotoga maritima MSB8]
Length = 213
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EE+ ++P E + F ++++ +LS ++ D N KA+K LFE+ TPQ++
Sbjct: 2 IEELAREIVKRFPRNHKE---TDPFRVLISTVLSQRTRDENTEKASKKLFEVYRTPQELA 58
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ L + I+ G+YR+K+E I+ +S IL+ ++ ++P +LE L +LPG+GRK AN++
Sbjct: 59 KAKPEDLYDLIKESGMYRQKAERIVEISRILVEKYGGRVPDSLEELLKLPGVGRKTANIV 118
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + F P + VDTH+ RISNR+G +TP + E++L +++P + +V GR
Sbjct: 119 LWVGFKKPALAVDTHVHRISNRLGWVKTRTPEETEEALKKLLPEDLWGPINGSMVEFGRR 178
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+CK + P C+ C + N C+ ++
Sbjct: 179 ICKPQNPLCEECFLKNHCEFYRR 201
>gi|325860068|ref|ZP_08173194.1| endonuclease III [Prevotella denticola CRIS 18C-A]
gi|325482353|gb|EGC85360.1| endonuclease III [Prevotella denticola CRIS 18C-A]
Length = 234
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + + F EL + + F L+ A LLSAQ TD +N T L
Sbjct: 15 KRKKKMTRKERYTYVLNYFRKHTGHVSTELMFGSAFQLLCATLLSAQCTDKRINAITPEL 74
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + M +++ Y++++ K+++++ +S +L+ +F ++P + L L
Sbjct: 75 FRHYPDAKTMAKATVEEVLEYVKSVSYPNAKAKHLVEMSKMLVEKFGGEVPSDPDALVML 134
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQ 191
PG+GRK ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP +
Sbjct: 135 PGVGRKTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMKNIPTEEV 194
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+AH+W++LHGRY+CK+ KP C+ C ++C ++
Sbjct: 195 SDAHHWILLHGRYICKSAKPDCEHCPFDDICPKL 228
>gi|183220424|ref|YP_001838420.1| endonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|189910537|ref|YP_001962092.1| endonuclease III-like protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775213|gb|ABZ93514.1| Endonuclease III related protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778846|gb|ABZ97144.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 213
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/213 (29%), Positives = 115/213 (53%), Gaps = 1/213 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ E++ L ++ + L + + L +AV+LSAQ TD VN+ T LF
Sbjct: 1 MKRSKKTPKITEVYRLLEAEFGVVETPLTFSIPYELAIAVILSAQCTDERVNQVTPELFL 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + ++ I + G Y+ K+++I + ++++EF ++P+T+E RLPG
Sbjct: 61 AFPTLESFAKAPLSAIETKIFSTGFYKNKAKSIQGFARMVLSEFGGELPKTMEEAIRLPG 120
Query: 136 IGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GRK ANV+L+ +G+ VDTH+ R++ R+G P ++E+ +++I P + N
Sbjct: 121 FGRKTANVVLAEIYGVVEGFVVDTHVKRLTKRLGFTKKTDPIQIEREMMKITPKEICRNL 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+L+ GR C+AR+ C C +S+LC +
Sbjct: 181 SLYLIFLGRKYCQARRTFCSDCPLSSLCPSYSE 213
>gi|257087677|ref|ZP_05582038.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis D6]
gi|256995707|gb|EEU83009.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis D6]
gi|315025524|gb|EFT37456.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX2137]
Length = 394
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|255974887|ref|ZP_05425473.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T2]
gi|307278744|ref|ZP_07559811.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0860]
gi|255967759|gb|EET98381.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T2]
gi|306504605|gb|EFM73808.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0860]
gi|327535925|gb|AEA94759.1| A/G-specific adenine glycosylase [Enterococcus faecalis OG1RF]
Length = 394
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|332882777|ref|ZP_08450388.1| endonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679279|gb|EGJ52265.1| endonuclease III [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 209
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 112/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +P L + + +TL++AVLLSAQ+TD VN+ T LF AD
Sbjct: 1 MKKKEKVNFIIDTLENLYPEITIPLQHKDPYTLLIAVLLSAQTTDARVNQITPILFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ I+ +G+ KS+ I LS ILI++++ ++PQT E L LP +G
Sbjct: 61 NPYDMVLLSVDEIREIIKPLGLAPMKSKGIHGLSQILIDKYNGEVPQTFEALEALPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+LS AFGIPT VDTHI R+ +R GL+ G + + E+ R+ P + H +
Sbjct: 121 KTASVVLSQAFGIPTFPVDTHIHRLMHRWGLSDGSSVVQTEKDAKRLFPKEKWNKLHIQI 180
Query: 199 VLHGRYVCKAR 209
+L+GR AR
Sbjct: 181 ILYGREYSPAR 191
>gi|312127482|ref|YP_003992356.1| endonuclease iii [Caldicellulosiruptor hydrothermalis 108]
gi|311777501|gb|ADQ06987.1| endonuclease III [Caldicellulosiruptor hydrothermalis 108]
Length = 202
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 119/199 (59%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P PK L Y + L++A +L+AQSTD VNK T LF+ T +
Sbjct: 1 MIKELLKIYPQPKCTLNYNKPYELLIATILAAQSTDERVNKITAELFKKYPTLKSFAEAD 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++L+ I+ +G Y+ K+++I S ILI++++ +P T+E L +L G+GRK ANVI++
Sbjct: 61 LEELEKDIKPVGFYKNKAKSIKETSRILIDKYNGTLPTTIEELVKLKGVGRKTANVIMAN 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+GIP+I VDTH R+SNR+GL K K+E L I+ P+ +V HGR VCK
Sbjct: 121 IYGIPSIIVDTHCKRLSNRLGLVNSKDATKIEFELKNIVEPQMYTIFSNLMVYHGRAVCK 180
Query: 208 ARKPQCQSCIISNLCKRIK 226
A KP+C+ C I ++C+ K
Sbjct: 181 AIKPKCEVCTIKDVCEYFK 199
>gi|257084325|ref|ZP_05578686.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis Fly1]
gi|256992355|gb|EEU79657.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis Fly1]
Length = 394
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|183602757|ref|ZP_02964120.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219683144|ref|YP_002469527.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|241191477|ref|YP_002968871.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196882|ref|YP_002970437.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|183217995|gb|EDT88643.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219620794|gb|ACL28951.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|240249869|gb|ACS46809.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251436|gb|ACS48375.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794469|gb|ADG34004.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis V9]
Length = 247
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 5/206 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + P+ K +L + F L+VA +LSAQ+TD VN T LF T +
Sbjct: 12 RMHRQYETLCEFIPTVKCQLDFHTPFELLVATILSAQTTDKRVNSITPELFGTYPTAAAL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +++ IR +G Y K+E+II+++ ++ F +IPQT+E LT LPG+GRK ANV
Sbjct: 72 ADARLEDVESIIRPLGFYHVKAEHIIAVARQIVERFGGQIPQTMEELTSLPGVGRKTANV 131
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
+L AF +P VDTH+ R++ R+ P ++EQ + P + + L
Sbjct: 132 VLGNAFRVPGFPVDTHVIRVTGRLHWRDDWMKTSTTPERIEQEITGCFPESEWTDLSHRL 191
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
++ GR +C +R P+C++C + C
Sbjct: 192 IIFGRNICTSRSPECENCPLLPTCPS 217
>gi|302037243|ref|YP_003797565.1| A/G-specific adenine glycosylase [Candidatus Nitrospira defluvii]
gi|300605307|emb|CBK41640.1| A/G-specific adenine glycosylase (fragment) [Candidatus Nitrospira
defluvii]
Length = 240
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 91/227 (40%), Gaps = 8/227 (3%)
Query: 6 KSDSYQGNSPLGCLYTPK-ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQS 61
KS + SP + + + + + +L + + + ++V+ ++ Q+
Sbjct: 9 KSPRRKKKSPQSSVPLARGQKQRFQNRLLKWYKEHGRDLPWRKTSDPYHILVSEVMLQQT 68
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
V E + +++ +++ +G + E + S++ + +
Sbjct: 69 QVDRVIPKYHEFLERYPSFEQLADAPVAEVKQTWYPLGY-NIRPERLHSIACETVARYGG 127
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
++P E L GIGR A I S AF +DT++ R+ +R+ +A G+ ++
Sbjct: 128 QLPNDAEELLSFKGIGRYTAGAIRSFAFNEDAPILDTNVIRVLHRVFIAQGEPKSQKAAL 187
Query: 182 LL---RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+IP Y+ + L+ G VC AR P C C + CK
Sbjct: 188 WELSETLIPRGKGYDFNQALMDFGATVCTARDPYCLLCPMKPFCKTY 234
>gi|288802536|ref|ZP_06407975.1| endonuclease III [Prevotella melaninogenica D18]
gi|288335064|gb|EFC73500.1| endonuclease III [Prevotella melaninogenica D18]
Length = 215
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTRKERYDYALSYFRKNVGHVSTELNFGSAFQLLCATLLSAQCTDKRINAITPELFRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M ++ Y++++ K+++++ +S +L+ +FD ++P L LPG+GR
Sbjct: 61 DAKAMAEATADEIFEYVKSVSYPNSKAKHLVEMSKMLVEKFDGEVPSDPNALVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP + +AH+
Sbjct: 121 KTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMKNIPTEEVSDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
W++LHGRYVCK+ KP C+ C ++C ++
Sbjct: 181 WILLHGRYVCKSAKPDCEHCPFDSICPKL 209
>gi|298675584|ref|YP_003727334.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
gi|298288572|gb|ADI74538.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
Length = 203
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EE+ + ++P + F +++ +LS ++ D N + K LF ++P +++
Sbjct: 3 VEEVLHRLENEYPEIFYYQN-NDPFYVLITTVLSQRTRDSVTNSSAKTLFNKYNSPNELV 61
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E ++++ I+ +G YR K++ I +S ++++E+D ++P L L +LPG+GRK AN +
Sbjct: 62 HTDEDEIESLIKNVGFYRVKTQRIKQISEMILDEYDGQVPDNLNDLLKLPGVGRKTANCV 121
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ AF I VDTH+ RISNR+GL KTP K E+ L +I+P + V G+
Sbjct: 122 LTYAFSKKAIAVDTHVHRISNRLGLVETKTPEKTEKDLKKIVPENLWNKINELFVRFGQN 181
Query: 205 VCKARKPQCQSCIISNLCKRI 225
C+ P+C C++++ C ++
Sbjct: 182 TCRPVSPRCDVCVLNDTCPKL 202
>gi|54401351|gb|AAV34445.1| predicted endonuclease [uncultured proteobacterium RedeBAC7D11]
Length = 217
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 112/202 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I + +P PK L + N FTL++AVLLSAQ+TD VN TK LF+ A
Sbjct: 1 MNKKERALFIEAKLNELFPRPKAPLNHTNAFTLLIAVLLSAQTTDKRVNVVTKELFKKAQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + ML +GE+ + +I+T G+ KK++ II+ S I+ + + K+P L L LPG+G
Sbjct: 61 SAKDMLKLGEQNVYQFIKTCGLAPKKAKAIIATSKIIEEKHNGKVPNDLAMLEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S F P VDTHI R++ R GL+ GK+ + E+ L + + H +
Sbjct: 121 KTASVVVSEFFNKPAFPVDTHIHRLAQRWGLSNGKSVKQTEEDLKSLFDESKWRDLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGRTFCSARGCDGTICFMCK 202
>gi|256763333|ref|ZP_05503913.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T3]
gi|256684584|gb|EEU24279.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T3]
Length = 394
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANIDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|229160597|ref|ZP_04288592.1| endonuclease III [Bacillus cereus R309803]
gi|228623007|gb|EEK79838.1| endonuclease III [Bacillus cereus R309803]
Length = 215
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI LS +L+++++ ++P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLSQMLLDDYNGEVPRDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+ S+AFG+P I VDTH+ R+S R+ + + +VE++L++ IP H+
Sbjct: 121 KTANVVASVAFGMPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|256961045|ref|ZP_05565216.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
Merz96]
gi|293384565|ref|ZP_06630431.1| A/G-specific adenine glycosylase [Enterococcus faecalis R712]
gi|293386794|ref|ZP_06631365.1| A/G-specific adenine glycosylase [Enterococcus faecalis S613]
gi|312906391|ref|ZP_07765399.1| A/G-specific adenine glycosylase [Enterococcus faecalis DAPTO 512]
gi|312979450|ref|ZP_07791138.1| A/G-specific adenine glycosylase [Enterococcus faecalis DAPTO 516]
gi|256951541|gb|EEU68173.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
Merz96]
gi|291078111|gb|EFE15475.1| A/G-specific adenine glycosylase [Enterococcus faecalis R712]
gi|291083797|gb|EFE20760.1| A/G-specific adenine glycosylase [Enterococcus faecalis S613]
gi|310627545|gb|EFQ10828.1| A/G-specific adenine glycosylase [Enterococcus faecalis DAPTO 512]
gi|311287821|gb|EFQ66377.1| A/G-specific adenine glycosylase [Enterococcus faecalis DAPTO 516]
Length = 394
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|288925023|ref|ZP_06418959.1| endonuclease III [Prevotella buccae D17]
gi|288338213|gb|EFC76563.1| endonuclease III [Prevotella buccae D17]
Length = 215
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F K P+ EL++ + F L+VA LLSAQ TD +N+ T LF+
Sbjct: 1 MTREERYHFILDYFRKKLPNVNTELHFGSSFQLLVATLLSAQCTDKRINQITPELFKHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M + + YIRT+ K+++++ ++ +L+ +F ++P L+ L +LPG+GR
Sbjct: 61 DAASMAKAEVEDVFEYIRTVSYPNAKAKHLVEMARMLVTDFGGEVPDGLQNLMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG + VDTH++R+S+R+GL P TP KVE+ L++ IP +AH+
Sbjct: 121 KTANVLQAVWFGRAAMAVDTHVYRVSHRMGLVPKTANTPLKVEEYLMKHIPQSDIPDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVCK+ +P+C+ C C ++
Sbjct: 181 WLLLHGRYVCKSARPECEKCFFDQYCPKL 209
>gi|222099270|ref|YP_002533838.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
gi|221571660|gb|ACM22472.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
Length = 208
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E+I ++P E + F ++++ +LS ++ D N +A + LFE+ TP+ +
Sbjct: 2 IEKIAKEIIERFPRDHKE---TDPFRVLISTVLSQRTRDENTERAARKLFEVYRTPEDLA 58
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ L + I+ G+YR+K+E I+ +S I++ ++ K+P TLE L RLPG+GRK AN++
Sbjct: 59 KAKPEDLYDLIKESGMYRQKAERIVKISKIIVEKYSGKVPDTLEELLRLPGVGRKTANIV 118
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + F P + VDTH+ RISNR+G KTP + E++L R++P K + +V GR
Sbjct: 119 LWVGFRKPALAVDTHVHRISNRLGWVKTKTPEETEKALKRLLPEKLWGPINGSMVEFGRN 178
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC+ P+C+ C + C+ ++
Sbjct: 179 VCRPVNPKCEDCFLKKHCEYYRK 201
>gi|225387725|ref|ZP_03757489.1| hypothetical protein CLOSTASPAR_01495 [Clostridium asparagiforme
DSM 15981]
gi|225046188|gb|EEG56434.1| hypothetical protein CLOSTASPAR_01495 [Clostridium asparagiforme
DSM 15981]
Length = 227
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 116/211 (54%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ T K++ + + + K ++ + L+VA++LSAQSTD V +
Sbjct: 4 SEEKQKKIDTEKQVMPVLKQLDRLYGTTKTGFFHQEPWQLLVAIMLSAQSTDKQVEEVLP 63
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L+ + M ++++ IR+IG+Y+ K++NI ++ E+ K+P+T+ L
Sbjct: 64 ELYRSYPKVEYMANAPVEEIERNIRSIGLYKSKAKNIKKCCGQIVTEYAGKVPETIGELL 123
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
L G+GRK A + L+ A GIP + VDTH+FRIS R+G A GK P +VE L +++P +
Sbjct: 124 GLAGVGRKTATLYLADAHGIPGVTVDTHVFRISRRLGWAWGKNPAQVELELQKVLPVDYW 183
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ L+ HGR VC ARK C+ C + C
Sbjct: 184 NRINFQLIYHGRAVCTARKAHCEICPLETWC 214
>gi|32267074|ref|NP_861106.1| endonuclease III [Helicobacter hepaticus ATCC 51449]
gi|32263126|gb|AAP78172.1| endonuclease III [Helicobacter hepaticus ATCC 51449]
Length = 230
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 72/224 (32%), Positives = 120/224 (53%), Gaps = 1/224 (0%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M + K S + KE+E I F + K EL Y N + L+V V+LSAQ
Sbjct: 1 MATQKVIKKSVSKSKDFKKHNKKEIEIIKSRFLEHYGDAKTELVYHNIYELLVCVMLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
TD VN T LF+ + + ++ I+++ + K++++I++++ ++N+F+
Sbjct: 61 CTDKRVNLVTPALFKAYPNVATLSQAHLEDIKILIQSVSFFNNKAKHLITMANQVMNDFN 120
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+IP T L L G+G+K ANV+L F + VDTH+FR+S+R+GL+ K+ + E+
Sbjct: 121 GEIPTTQAELKTLAGVGQKTANVVLIEFFEQNYMAVDTHVFRVSHRLGLSGAKSALETEK 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L ++ H VL GRY CKA KP C++C + C++
Sbjct: 181 ELTQVF-KTQLSTLHQAFVLFGRYTCKALKPMCENCFVGEFCQK 223
>gi|315608062|ref|ZP_07883055.1| endonuclease III [Prevotella buccae ATCC 33574]
gi|315250531|gb|EFU30527.1| endonuclease III [Prevotella buccae ATCC 33574]
Length = 215
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F K P+ EL++ + F L+VA LLSAQ TD +N+ T LF+
Sbjct: 1 MTREERYHFILDYFRKKLPNVNTELHFGSSFQLLVATLLSAQCTDKRINQITPELFKHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
M + + YIRT+ K+++++ ++ +L+ +F ++P L+ L +LPG+GR
Sbjct: 61 DAASMAKAEVEDVFEYIRTVSYPNAKAKHLVEMARMLVADFGGEVPDGLQNLMKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG + VDTH++R+S+R+GL P TP KVE+ L++ IP +AH+
Sbjct: 121 KTANVLQAVWFGRAAMAVDTHVYRVSHRMGLVPKTANTPLKVEEYLMKHIPQSDIPDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WL+LHGRYVCK+ +P+C+ C C ++
Sbjct: 181 WLLLHGRYVCKSARPECEKCFFDQYCPKL 209
>gi|269929161|ref|YP_003321482.1| HhH-GPD family protein [Sphaerobacter thermophilus DSM 20745]
gi|269788518|gb|ACZ40660.1| HhH-GPD family protein [Sphaerobacter thermophilus DSM 20745]
Length = 336
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 9/211 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++L ++ + + + +L + + + ++V+ ++ Q+ V E T
Sbjct: 21 EQLADLQQRLLAWYRAHRRDLPWRRTRDPYRVLVSEVMLQQTQVERVIPKYHEFLERFPT 80
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ +G R+ N+ + ++ +P+ ++ L LPGIGR
Sbjct: 81 IESLAAAPTAEVIRVWSGLGYNRRAV-NLQRAAQAVVERHGGVMPRDVDELLALPGIGRY 139
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A I A+ VDT+I R+ +R+ P +++ R++P Y+
Sbjct: 140 TAGAIACFAYEQDVGFVDTNIRRVLHRLFFGPEVPTPRATAREIQALADRVVPAGEGYDW 199
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ G C ARKP C C + C+
Sbjct: 200 NQGLMEFGAVHCTARKPLCVVCPLQAHCRAY 230
>gi|223933866|ref|ZP_03625831.1| endonuclease III [Streptococcus suis 89/1591]
gi|330832747|ref|YP_004401572.1| endonuclease III [Streptococcus suis ST3]
gi|223897455|gb|EEF63851.1| endonuclease III [Streptococcus suis 89/1591]
gi|329306970|gb|AEB81386.1| endonuclease III [Streptococcus suis ST3]
Length = 224
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LFE
Sbjct: 19 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFEAFP 78
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L++ D +PQT E L L G+GR
Sbjct: 79 TPQAMAAAQVKDIEPYISRLGLYRNKAKFLKECAQQLLDRHDGIVPQTREELEALAGVGR 138
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + E+ ++ ++PP+ AH
Sbjct: 139 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETEKRVMEVLPPELWLPAHQA 198
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR VC + P+C+
Sbjct: 199 MIYFGREVCHPKNPECEK 216
>gi|47094408|ref|ZP_00232097.1| endonuclease III [Listeria monocytogenes str. 4b H7858]
gi|47017216|gb|EAL08060.1| endonuclease III [Listeria monocytogenes str. 4b H7858]
Length = 203
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/194 (44%), Positives = 130/194 (67%), Gaps = 1/194 (0%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE +P+ LA+ ++L
Sbjct: 1 MFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYHSPEDYLAVPLEELMED 60
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
IR+IG+YR K++NI LS ++ EF+ ++P+T L LPG+GRK ANV+LS+ FGIP I
Sbjct: 61 IRSIGLYRNKAKNIQGLSEKILIEFNGEVPKTHAELESLPGVGRKTANVVLSVGFGIPAI 120
Query: 155 GVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VDTH+ RIS R+G+ + +VE++L R +P + +AH++++ GRY CKAR P+C
Sbjct: 121 AVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPEC 180
Query: 214 QSCIISNLCKRIKQ 227
+C + LC+ K+
Sbjct: 181 PTCPLLYLCREGKK 194
>gi|332704863|ref|ZP_08424951.1| endonuclease III [Desulfovibrio africanus str. Walvis Bay]
gi|332555012|gb|EGJ52056.1| endonuclease III [Desulfovibrio africanus str. Walvis Bay]
Length = 219
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I + L + + L+VA +L+AQ TD VN+ T LF P
Sbjct: 9 RERARIIHERLRQVYDPHITALDWTEPWQLMVATVLAAQCTDERVNQVTPELFRRWPGPA 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ + +L+ IR+ G +R K++N+++ +++++++ ++P+T+ + +PG+ RK A
Sbjct: 69 ELRQASQAELEEVIRSTGFFRNKAKNLLAAANLVMDKHGGEMPRTMAEMIEIPGVARKTA 128
Query: 142 NVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
N++LS A G+ I VDTH+ R+S R+GL P ++E+ L+ + ++ LV
Sbjct: 129 NIVLSTALGVVEGIAVDTHVKRLSFRLGLTESDKPERIERDLMEAFEREIWGEVNHLLVQ 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
HGR VC+AR P+C C+++++C ++
Sbjct: 189 HGRAVCQARLPRCSVCLLADVCPKL 213
>gi|256963813|ref|ZP_05567984.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
HIP11704]
gi|307271760|ref|ZP_07553031.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0855]
gi|256954309|gb|EEU70941.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
HIP11704]
gi|306511638|gb|EFM80637.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0855]
Length = 394
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANIDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADISKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|237736067|ref|ZP_04566548.1| endonuclease III [Fusobacterium mortiferum ATCC 9817]
gi|229421881|gb|EEO36928.1| endonuclease III [Fusobacterium mortiferum ATCC 9817]
Length = 202
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ K+ P+ L Y F L+VAV+LSAQ TDV VN T +++ +TP++ + +++
Sbjct: 1 MNEKFGKPECALKYNTPFELLVAVILSAQCTDVRVNIVTSEMYKKVNTPEQFANLPVEEI 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG- 150
+ I++ G YR K++NI S L+NE++ +IPQ ++ L +L G+GRK ANV+ +G
Sbjct: 61 EEMIKSTGFYRNKAKNIKLCSQQLLNEYNGEIPQEMDKLVKLAGVGRKTANVVRGEIWGL 120
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
I VDTH+ R+SN IGL P K+EQ L++I+P + ++L+L GR C AR+
Sbjct: 121 ADGITVDTHVKRLSNLIGLTKNDDPIKIEQDLMKIVPRDSWIDFSHYLILQGRDKCIARR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
P+CQ C IS C K+
Sbjct: 181 PKCQECEISGYCTYGKK 197
>gi|315636045|ref|ZP_07891304.1| endonuclease III [Arcobacter butzleri JV22]
gi|315479701|gb|EFU70375.1| endonuclease III [Arcobacter butzleri JV22]
Length = 214
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 1/204 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T ++++ I F + EL Y N + L++A++LSAQ TD VN T LFE +
Sbjct: 5 TKEDIQIIKEAFLEHYKEAVTELKYKNDYELLIAIILSAQCTDKRVNIITPALFEKYPSV 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ ++ +++ + K++NI+ ++ ++ +D IP + L +L G+G K
Sbjct: 65 KELAVADLGDVKELLKSCSFFNNKAQNIVKMAQSVVMNYDGNIPHNQKELMKLAGVGNKT 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV + G + VDTH+FR+S+R+GL+ K E L++ + + H +VL
Sbjct: 125 ANVFMIEFEGANLMAVDTHVFRVSHRLGLSDAKNVTLTEADLVKKL-KGDLHIFHQAMVL 183
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GRY+CKA KP+C C +CK
Sbjct: 184 FGRYICKAVKPECDKCYFPQVCKS 207
>gi|30019695|ref|NP_831326.1| endonuclease III [Bacillus cereus ATCC 14579]
gi|296502215|ref|YP_003663915.1| endonuclease III [Bacillus thuringiensis BMB171]
gi|29895239|gb|AAP08527.1| Endonuclease III [Bacillus cereus ATCC 14579]
gi|296323267|gb|ADH06195.1| endonuclease III [Bacillus thuringiensis BMB171]
Length = 215
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK T++LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ ++P + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPNDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|160934389|ref|ZP_02081776.1| hypothetical protein CLOLEP_03261 [Clostridium leptum DSM 753]
gi|156867062|gb|EDO60434.1| hypothetical protein CLOLEP_03261 [Clostridium leptum DSM 753]
Length = 214
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 109/207 (52%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++P L Y + L+++ L+AQ TD+ VN T LF
Sbjct: 1 MTNKERASLAVAALKKEYPDSICSLTYHDPLQLLISTRLAAQCTDLRVNMVTPKLFSDFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
++ IRT G+Y+ K+ +II++ +L +EF K+P TLE LTRLPGIGR
Sbjct: 61 DVCAFADADISAVEEDIRTCGLYKTKARDIIAMCQMLRDEFGGKVPDTLEELTRLPGIGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++L F P + VDTH R++ R+G K P K+E L + PK + + L
Sbjct: 121 KTANLVLGDIFHKPAVVVDTHCIRLTRRLGFHNLKDPYKIEMILKDALDPKESNDFCHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
VLHGR VC ARKP+C+ C + C+
Sbjct: 181 VLHGRAVCDARKPKCEQCCMKEFCETY 207
>gi|315170493|gb|EFU14510.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1342]
Length = 394
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|157364361|ref|YP_001471128.1| endonuclease III [Thermotoga lettingae TMO]
gi|157314965|gb|ABV34064.1| endonuclease III [Thermotoga lettingae TMO]
Length = 217
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 3/205 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++ + +P E + F +++A +LS ++ D N +KA+K LFE
Sbjct: 5 NRRQIIFVCKKIIDLFPRSSFE---KDPFRVLIATILSQRTKDENTDKASKKLFESFPDV 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ + I+ G+YR+K+E II +S I++ +F+ KIP L L LPG+GRK
Sbjct: 62 YSLSMAKPSQIYDLIKASGMYRQKAERIIKVSQIIVEKFNGKIPANLHDLLSLPGVGRKT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
AN++L F P + VDTH+ RISNR+G KTP + E+ L +IIP K + +V
Sbjct: 122 ANIVLYHCFCQPALAVDTHVHRISNRLGFVKTKTPEQTEEGLKKIIPEKFWGPINGAMVE 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G+ VC RKP+CQ C ++ C+
Sbjct: 182 FGKKVCLPRKPKCQECPVNKYCEYF 206
>gi|152993389|ref|YP_001359110.1| endonuclease III [Sulfurovum sp. NBC37-1]
gi|151425250|dbj|BAF72753.1| endonuclease III [Sulfurovum sp. NBC37-1]
Length = 216
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T KE+EEI LF +P EL Y N + L+++V+LSAQ TD VN T LFE P
Sbjct: 8 TKKEIEEIKALFLEHYPDSVTELEYRNLYELLISVMLSAQCTDKRVNIITPTLFERYPDP 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++++YI T + K++N+I ++ ++ + N+IP + L +L G+G+K
Sbjct: 68 VSLANADLDEVKSYINTCSFFNNKAKNLIKMAQSVVENYGNEIPLERDELVKLAGVGQKT 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
ANV++ G + VDTH+FR+++R+GL KT K E+ L R + H +VL
Sbjct: 128 ANVVMIEYTGANLMAVDTHVFRVAHRLGLCDAKTAVKCEEELSRKF-KTDLHRLHQAMVL 186
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
GRY CKA KP+C C ++ C+
Sbjct: 187 FGRYRCKAVKPECDDCFMAAHCR 209
>gi|332520490|ref|ZP_08396952.1| DNA-(apurinic or apyrimidinic site) lyase [Lacinutrix algicola
5H-3-7-4]
gi|332043843|gb|EGI80038.1| DNA-(apurinic or apyrimidinic site) lyase [Lacinutrix algicola
5H-3-7-4]
Length = 218
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + + +P L + + +TL+VAVLLSAQ TDV VN+ T LF AD
Sbjct: 1 MTKQEKVDFVINTLNELYPEIPIPLDHKDPYTLLVAVLLSAQCTDVRVNQITPLLFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ IR G+ KS+ I LSHILI++ + ++P++ E L LP +G
Sbjct: 61 NPYDMIKMSVEEIKEIIRPCGLSPMKSKGIHGLSHILIDKHNGEVPKSFEALEALPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R L GK+ + E+ R+ P + + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLTNGKSVTQTEKDAKRLFPKETWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|302850094|ref|XP_002956575.1| hypothetical protein VOLCADRAFT_33476 [Volvox carteri f.
nagariensis]
gi|300258102|gb|EFJ42342.1| hypothetical protein VOLCADRAFT_33476 [Volvox carteri f.
nagariensis]
Length = 198
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 106/198 (53%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I S +PSP L++ + F L+VAV+LSAQSTD VN T LF
Sbjct: 1 RAKALRIQQQLSELYPSPPIPLHHGSTFQLLVAVVLSAQSTDAKVNTVTPELFARGPDAM 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
M A+ +++ IR +G+ K+ N+ LS +L+ + ++P + L LPG+G K A
Sbjct: 61 AMAALKVSEIERIIRVLGLAPTKARNVQRLSQMLVELYGGQVPDSFSALEELPGVGHKTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+V++ AF P VDTHI R++ R GL+ GK+ + EQ L ++P + H ++
Sbjct: 121 SVVMCQAFSHPAFPVDTHIHRLAQRWGLSNGKSVEQTEQDLKTLLPEHTWRDLHLQMIYF 180
Query: 202 GRYVCKARKPQCQSCIIS 219
GR C A++ ++C I
Sbjct: 181 GREHCPAQRHDTRACPIC 198
>gi|315162128|gb|EFU06145.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0645]
Length = 394
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WNPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPKPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|227519505|ref|ZP_03949554.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0104]
gi|257416878|ref|ZP_05593872.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
AR01/DG]
gi|227073030|gb|EEI10993.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0104]
gi|257158706|gb|EEU88666.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis
ARO1/DG]
Length = 394
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASNRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|116750159|ref|YP_846846.1| A/G-specific adenine glycosylase [Syntrophobacter fumaroxidans
MPOB]
gi|116699223|gb|ABK18411.1| A/G-specific DNA-adenine glycosylase [Syntrophobacter fumaroxidans
MPOB]
Length = 388
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ PK +I L + + L + + + ++ ++ Q+ + + E
Sbjct: 1 MLQPKTRLQIQTLLLSWFDENQRPLPWREKYRPYEIWISEIMLQQTQVKTMLPYFRRWME 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
Q + E ++ + +G Y + NI + I++ P+ + +PG
Sbjct: 61 RFPDVQSIADAREDEVLKHWEGLGYYSRAV-NIRRTAEIIVRHHGGTFPKAHSTILGMPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
IG A I S+AF VD ++ RI R+ K + + +IP
Sbjct: 120 IGPYTAGAISSIAFNEDRPLVDGNVERILARLFNLDTPVEEKNTRKFIWNTAEELIPAGR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC R+P C+ C ++ LC+ +
Sbjct: 180 ARQFNQALMDLGATVCLPRRPACEKCPLNGLCESRR 215
>gi|257081729|ref|ZP_05576090.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis E1Sol]
gi|256989759|gb|EEU77061.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis E1Sol]
Length = 394
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|206970634|ref|ZP_03231586.1| endonuclease III [Bacillus cereus AH1134]
gi|206734270|gb|EDZ51440.1| endonuclease III [Bacillus cereus AH1134]
Length = 215
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK T++LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCQMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+AFGIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAFGIPAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|125624510|ref|YP_001032993.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493318|emb|CAL98289.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071301|gb|ADJ60701.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 386
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++E + + K L + + + ++ ++S Q+ V + +
Sbjct: 3 WSKNKIKEFQKDLLSWYDANKKPLPWRQTTEPYKIWISEIMSQQTQVETVIPYFERFMKK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +L +G Y ++ N+ + ++NE++ K P L+ + L GI
Sbjct: 63 YPTVESLAQADDTELLKLWEGLGYYS-RARNLKIAAQEVVNEYNGKFPDNLKEILSLRGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++F + +D ++ R+++R ++ + ++ L ++ K
Sbjct: 122 GPYTAAAIASISFDLAEPAIDGNLMRVTSRIFELECDISKSSSRKIFDEHLRTLVSKKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC +KP+C++C ++ C
Sbjct: 182 GDFNQGLMDLGSLVCSPKKPKCETCPLNKYC 212
>gi|320103182|ref|YP_004178773.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
gi|319750464|gb|ADV62224.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
Length = 466
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 11/233 (4%)
Query: 2 VSSKKSDSYQGN--SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVL 56
++ +K S P +E + + L + + + ++V+
Sbjct: 1 MARRKDGSATTPDDPAAAPDLDPSWVEAVRRRLIAWYDHHHRPLPWRETRDPYRILVSET 60
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+T E T + A E + +G YR ++ + + +++
Sbjct: 61 MLVQTTVAAAIPFYHRFLERFPTIDALAAASEADVLKVWEGLGYYR-RARLLHQAARVVV 119
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+P L LPG+GR A + S AF P V+ + R+ R
Sbjct: 120 ERHGGTVPSDPHTLAELPGVGRYIAGAVRSFAFDQPAPIVEANTQRLLARWLAIQTNLKT 179
Query: 177 K-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
K + ++ R++PP + + G +CK +P C C ++ LC+
Sbjct: 180 KPTQDRLWRAAERLVPPDQPGRFNQAFMELGALICKPTQPDCPLCPVTELCQA 232
>gi|312900070|ref|ZP_07759387.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0470]
gi|311292827|gb|EFQ71383.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0470]
Length = 394
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|229544910|ref|ZP_04433635.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1322]
gi|229309802|gb|EEN75789.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1322]
Length = 394
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSLFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+ F +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSITFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|296876867|ref|ZP_06900914.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus
parasanguinis ATCC 15912]
gi|296432111|gb|EFH17911.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus
parasanguinis ATCC 15912]
Length = 207
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P K L + NHF L+VAV+LSAQ+TD VNKAT LF
Sbjct: 2 VLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A E + +I +G+YR K++ + + L++ F+ ++PQT E L L G+GR
Sbjct: 62 TPQAMAAASEAAIAKHISKLGLYRNKAKFLKKCAQQLLDNFNGQVPQTREELESLTGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+ FGIP VDTH+ RI + TP +VE+ ++ ++P AH
Sbjct: 122 KTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPKSEWLAAHQA 181
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C + P+C
Sbjct: 182 MIYFGRAICHPKNPECDQ 199
>gi|268317390|ref|YP_003291109.1| endonuclease III [Rhodothermus marinus DSM 4252]
gi|262334924|gb|ACY48721.1| endonuclease III [Rhodothermus marinus DSM 4252]
Length = 267
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
P+ EL + N L+VAV+LSAQ TD VN+ T LF T + + A + + YIR+
Sbjct: 7 RPQTELRHENPCQLLVAVMLSAQCTDARVNQVTPALFAAFPTVEALAAAEPEDVLPYIRS 66
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+ K+ ++++ + + + F +IP +LE L LPG+G K A V+ S+AFG+ + VD
Sbjct: 67 VSYPNSKARHLVAAARRIRDAFGGEIPASLEALESLPGVGPKTARVVASVAFGVAALPVD 126
Query: 158 THIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
TH++R+++RIGL +TP +VE+ L R +P + AH+ L+LHGRY C AR+P C+ C
Sbjct: 127 THVYRVAHRIGLVRRARTPLEVERRLKRQLPARDWGEAHHLLILHGRYTCTARRPHCERC 186
Query: 217 IISNLCKRIKQ 227
++++LC ++
Sbjct: 187 VLTDLCDHYRR 197
>gi|212224145|ref|YP_002307381.1| endonuclease III [Thermococcus onnurineus NA1]
gi|212009102|gb|ACJ16484.1| endonuclease III [Thermococcus onnurineus NA1]
Length = 243
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K E+I + P K L + + ++ ++S + D K + LFE
Sbjct: 23 KKKRAEKIVEILMKTHPREK--LLIGDPYRTLIHCIISQRMRDEVTYKVWEKLFEKYGDI 80
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSE--NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++Q +++ G+ K++ I+ S I++ E+ K+P + L +LPGIGR
Sbjct: 81 ETIARTPIEEMQTFLKENGVGLWKTKGEWIVKASQIILKEYGGKVPDDIHELMKLPGIGR 140
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG I VDTH+ RIS R+GLAP + P +VE L +IP + ++
Sbjct: 141 KCANIVLAYGFGRQAIPVDTHVNRISKRLGLAPPRVQPERVEDYLRELIPREKWIYVNHA 200
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+V HG+ +C+ KP+C C + LC K
Sbjct: 201 MVDHGKTICRPIKPRCDECPLRELCPYSK 229
>gi|327314646|ref|YP_004330083.1| endonuclease III [Prevotella denticola F0289]
gi|326945099|gb|AEA20984.1| endonuclease III [Prevotella denticola F0289]
Length = 215
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTRKERYTYVLNYFRKHTGHVSTELMFGSAFQLLCATLLSAQCTDKRINAITPELFRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M +++ Y++++ K+++++ +S +L+ +F ++P L LPG+GR
Sbjct: 61 DAKTMAKATVEEVLEYVKSVSYPNAKAKHLVEMSKMLVEKFGGEVPSDPNALVMLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP + +AH+
Sbjct: 121 KTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMKNIPTEEVSDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
W++LHGRY+CK+ KP C+ C ++C ++
Sbjct: 181 WILLHGRYICKSAKPDCEHCPFDDICPKL 209
>gi|325971542|ref|YP_004247733.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta sp. Buddy]
gi|324026780|gb|ADY13539.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta sp. Buddy]
Length = 214
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++EIF P L + F +++V+LSAQ+TD VN K LF
Sbjct: 1 MNKKQRMQEIFSTLDTLLPQTIQFLEQRDPFRFLISVILSAQTTDRIVNVVAKELFAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
Q + + +++ I G YR K+++II+ S L++ +P T+E L +LPG+GR
Sbjct: 61 DKQTLAQASSEDVESIIYPTGYYRNKAKHIIACSEALLDCD---LPDTMEELVKLPGVGR 117
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+ +L +G I VDTH R+ NR+GL K P KVE+ + ++ QY
Sbjct: 118 KTASCVLGDIYGKCAIIVDTHFSRVVNRLGLVDTKDPEKVEKQIAVLLDDPKQYRFSMTA 177
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
L GR VC A+KP+C++C +S+LC
Sbjct: 178 NLFGRTVCHAKKPECENCPLSSLCPS 203
>gi|115378869|ref|ZP_01466007.1| A/G-specific adenine glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|310820058|ref|YP_003952416.1| a/g-specific adenine glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|115364108|gb|EAU63205.1| A/G-specific adenine glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|309393130|gb|ADO70589.1| A/G-specific adenine glycosylase [Stigmatella aurantiaca DW4/3-1]
Length = 371
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ I + K +L + + + + ++ ++ Q+ V + +
Sbjct: 12 RVAAIRAPLLAWYGREKRDLPWRRTSDPYAIWLSEVMLQQTQVSTVIPYWERFLARFPSV 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + A + R +G Y ++ N+ + ++ F + P T + L LPG GR
Sbjct: 72 RALAAAPLDDVLAAWRGLGYYS-RARNLHRAAQEVVANFGGRFPPTAKDLLTLPGFGRYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAH 195
A + S+AFG VD ++ R+ +R+ G +K ++ L ++ + + +
Sbjct: 131 AGAVASIAFGEEAPLVDGNVARVLSRLFAVEGMPGDKAREARLWTLAGALVKGERPGDFN 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ HG VC+ +P C C + C +
Sbjct: 191 QALMEHGATVCRPERPLCLLCPVRGACLAYQ 221
>gi|317133417|ref|YP_004092731.1| endonuclease III [Ethanoligenens harbinense YUAN-3]
gi|315471396|gb|ADU28000.1| endonuclease III [Ethanoligenens harbinense YUAN-3]
Length = 217
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 107/204 (52%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I +P L + L++A LSAQ TD VN TK LF
Sbjct: 1 MDIKERAAYIVQALETAYPDAACSLESRDALQLLIATRLSAQCTDARVNIVTKDLFARYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + +++ I + G+Y K+ +I+ + IL+ E+ +P TLE L RLPG+GR
Sbjct: 61 TAEDFAGANIADIESIIHSCGLYHTKARDIVRMCQILVTEYGGGVPDTLEALVRLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+I+ +G P I DTH RISNR+GL K P +VE L +I P+ + L
Sbjct: 121 KTANLIMGDIYGQPAIVADTHCIRISNRLGLVDTKDPKRVEMRLRELIAPEKSSMFCHRL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
V HGR VCKAR+P+C C ++ C
Sbjct: 181 VWHGRAVCKARQPECAHCCLAPYC 204
>gi|257421678|ref|ZP_05598668.1| A/G-specific adenine glycosylase [Enterococcus faecalis X98]
gi|257163502|gb|EEU93462.1| A/G-specific adenine glycosylase [Enterococcus faecalis X98]
gi|315155572|gb|EFT99588.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0043]
Length = 394
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|295113653|emb|CBL32290.1| A/G-specific DNA-adenine glycosylase [Enterococcus sp. 7L76]
Length = 394
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|116511658|ref|YP_808874.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107312|gb|ABJ72452.1| A/G-specific DNA-adenine glycosylase [Lactococcus lactis subsp.
cremoris SK11]
Length = 386
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++E + + K L + + + ++ ++S Q+ V + +
Sbjct: 3 WSKNKIKEFQKDLLSWYDANKKPLPWRQTTEPYKIWISEIMSQQTQVETVIPYFERFIKK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +L +G Y ++ N+ + ++NE++ K P L+ + L GI
Sbjct: 63 YPTVESLAQADDTELLKLWEGLGYYS-RARNLKIAAQEVVNEYNGKFPDNLKEILSLRGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++F + +D ++ R+++R ++ + ++ L ++ K
Sbjct: 122 GPYTAAAIASISFDLAEPAIDGNLMRVTSRIFELECDISKSSSRKIFDEHLRTLVSKKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G VC +KP+C++C ++ C +
Sbjct: 182 GDFNQGLMDLGSLVCSPKKPKCETCPLNKYCAAV 215
>gi|229149844|ref|ZP_04278072.1| endonuclease III [Bacillus cereus m1550]
gi|228633525|gb|EEK90126.1| endonuclease III [Bacillus cereus m1550]
Length = 215
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 81/210 (38%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TDV VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHENPFELVIAVALSAQCTDVLVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCQMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+A+GIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAYGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|319936476|ref|ZP_08010892.1| endonuclease III [Coprobacillus sp. 29_1]
gi|319808591|gb|EFW05143.1| endonuclease III [Coprobacillus sp. 29_1]
Length = 218
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ I F +P EL + N L++AV+LSAQ+TD +VNK TK LF+ T
Sbjct: 1 MNKEKVTRILNEFDRMFPDAACELVHDNELELLIAVMLSAQTTDASVNKLTKTLFQKYHT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++L+N +R+IG+YR K++N+ +++ LI EF ++P + L LPG+GRK
Sbjct: 61 VEDYAHAPIEQLENDLRSIGLYRNKAKNVKAMAQQLIVEFGGQVPCDHDALQTLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
ANV++S F +P I VDTH+ RIS R+G A + VE+ L++ +P + H+ +
Sbjct: 121 TANVVVSEGFKVPAIAVDTHVERISKRLGFALKKDSVLTVEKKLMKAVPKERWIKTHHQM 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GRY CK+ P CQ C + ++CK K+
Sbjct: 181 IFFGRYHCKSMNPMCQDCHLIDICKEPKR 209
>gi|15678789|ref|NP_275906.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
gi|2621854|gb|AAB85267.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 233
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 113/203 (55%), Gaps = 2/203 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+++ I + + + +++ +LS ++ D N ++AT LFE + +
Sbjct: 22 KDIDAIIGGLRSVY--SMRVFEDRDPYRVLIRTILSQRTRDENTDEATASLFERYPSIED 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++++ IR G Y K+ + +S I++ E+D K+P + L +LPG+GRK AN
Sbjct: 80 VAYAPLEEIEALIRKAGFYHVKARRVREVSRIILEEYDGKVPDDINELLKLPGVGRKTAN 139
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L AFG P I VDTH+ RISNRIGL +TP + E++L+++IP ++ + +V G
Sbjct: 140 CVLVYAFGRPAIPVDTHVHRISNRIGLVDTRTPEETERALMKVIPREYWIELNDLMVQFG 199
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+ +C+ P+ + C I++ C
Sbjct: 200 QDICRPLGPRHEECPIADHCDYY 222
>gi|326803078|ref|YP_004320896.1| endonuclease III [Aerococcus urinae ACS-120-V-Col10a]
gi|326651098|gb|AEA01281.1| endonuclease III [Aerococcus urinae ACS-120-V-Col10a]
Length = 220
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P EL Y +F L++AV+LSAQ+TD VNK T +LF
Sbjct: 1 MLSDQNAYYLLQEMIKFYPHVTTELNYETNFQLLIAVILSAQTTDQGVNKVTANLFRDYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T +KM K L+ YI+ IG+Y+ K++ I + +I +FD ++P+ + + + G+GR
Sbjct: 61 TAKKMAQANPKDLEPYIQPIGLYKNKAKYIQKAAQQIIEDFDGQVPKDRKDIESITGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+A+ +P VDTH+ R+ + G VE+ + ++ AH
Sbjct: 121 KTANVVLSIAYDVPAFAVDTHVQRVCKHHRIVDQGANVKDVEKRVTELLDESQWRQAHQA 180
Query: 198 LVLHGRYVCKARKPQC 213
LV GRY+C ARKP C
Sbjct: 181 LVRFGRYICTARKPTC 196
>gi|257791041|ref|YP_003181647.1| endonuclease III [Eggerthella lenta DSM 2243]
gi|257474938|gb|ACV55258.1| endonuclease III [Eggerthella lenta DSM 2243]
Length = 220
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 126/216 (58%), Gaps = 5/216 (2%)
Query: 14 SPLGCLY-TPKELEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATK 71
P + + + + +P+ + L+ + + F L +AVLLSAQ+TD VNK T
Sbjct: 1 MPRETMTAKRQRALAVAERMNEHYPAAECALHYWDDPFRLTIAVLLSAQTTDKGVNKVTP 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L+E TP + A + ++ IRTIG + K+ N+I + +++ ++ +IP+ ++ L
Sbjct: 61 ALWERYPTPADLAAADVRDVEGIIRTIGFFHTKAANVIKCAQMVVADYGGEIPRDIDELQ 120
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPP 188
+LPG+GRK ANV+L+ AFGI I VDTH+FRI++R+ A TP K E +LL++ P
Sbjct: 121 KLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHRLKFAGPSADTPAKTEAALLKLYPR 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ ++ VL GR C AR P+C +C + +LC
Sbjct: 181 EYWGPINHQWVLFGRETCIARNPKCATCFLCDLCPS 216
>gi|218233114|ref|YP_002366328.1| endonuclease III [Bacillus cereus B4264]
gi|229109102|ref|ZP_04238702.1| endonuclease III [Bacillus cereus Rock1-15]
gi|229144245|ref|ZP_04272659.1| endonuclease III [Bacillus cereus BDRD-ST24]
gi|218161071|gb|ACK61063.1| endonuclease III [Bacillus cereus B4264]
gi|228639253|gb|EEK95669.1| endonuclease III [Bacillus cereus BDRD-ST24]
gi|228674380|gb|EEL29624.1| endonuclease III [Bacillus cereus Rock1-15]
Length = 215
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P EL + N F L++AV LSAQ TD VNK TK+LF+
Sbjct: 1 MLNKTQIRYCLDTMADMYPEAHCELIHENPFELVIAVALSAQCTDALVNKVTKNLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L++ ++LQ IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GR
Sbjct: 61 TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCQMLLDDYNGKVPEDRDELTKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV++S+A+GIP I VDTH+ R+S R+ + + +VE++L++ +P H+
Sbjct: 121 KTANVVVSVAYGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMDEWGVTHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY CKA++PQC+ C + +C+ K+
Sbjct: 181 MIFFGRYHCKAQRPQCEECRLLEVCREGKK 210
>gi|312136836|ref|YP_004004173.1| endonuclease iii ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
gi|311224555|gb|ADP77411.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
Length = 209
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K + I +P ++ + + +++ +LS ++ D N KA+K LF D
Sbjct: 1 MKNKKMITIILKKLKELYPE---KIKQRDPYKVLIETILSQRTKDENTKKASKKLFSKYD 57
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T +K+ EK L+ I+ +G YR K++ I +S ILIN++D K+P+ L+ L +LPG+GR
Sbjct: 58 TIEKIANAQEKDLEKLIKCVGFYRVKAKRIKKISKILINKYDGKVPKNLKELLKLPGVGR 117
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN +L F I VDTH+ R++NRIGL KTP + E++L +IIP + +
Sbjct: 118 KTANCVLVYGFNEDAIPVDTHVHRVANRIGLVNTKTPEETEKTLRKIIPRDYWKEVNKLF 177
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V G+ +CK P+ + C I CK ++
Sbjct: 178 VEFGKNICKPTNPKHEKCPIKKFCKYVE 205
>gi|257460464|ref|ZP_05625565.1| endonuclease III [Campylobacter gracilis RM3268]
gi|257441795|gb|EEV16937.1| endonuclease III [Campylobacter gracilis RM3268]
Length = 211
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K++ EI + + EL + +++ L+V V+LSAQ TD VN T F
Sbjct: 1 MRSKKDILEIKKRILQNFAEERSELKFKDNYQLLVCVMLSAQCTDKRVNLITPRFFAEFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ ++ I + Y K+ N+I ++ ++ +FD +P GL L G+G+
Sbjct: 61 SVAELAKANLASVKLLISSCNFYNNKAVNLIKMAQAVVRDFDGVVPLDEAGLKSLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L G + VDTH+FR+++R+GL+ KTP E+ L H +
Sbjct: 121 KTAHVVLLEGAGANVMAVDTHVFRVAHRLGLSRAKTPELTERDLSEAF-KTDLGKLHQGM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VL GRY CKA KP C+ C ++ LC +
Sbjct: 180 VLFGRYTCKAIKPNCKECFLNELCSSKDK 208
>gi|313206332|ref|YP_004045509.1| endonuclease iii [Riemerella anatipestifer DSM 15868]
gi|312445648|gb|ADQ82003.1| endonuclease III [Riemerella anatipestifer DSM 15868]
gi|315023198|gb|EFT36209.1| Endonuclease III [Riemerella anatipestifer RA-YM]
gi|325336224|gb|ADZ12498.1| Predicted EndoIII-related endonuclease [Riemerella anatipestifer
RA-GD]
Length = 208
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 106/191 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E I +P L + + +TL+VAV LSAQ+TD VN+ T LF +AD
Sbjct: 1 MTKKQRAEIIIQELERLYPETPIPLDHKDPYTLLVAVALSAQTTDKKVNEVTPQLFAVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP KM + +++N I+ IG+ K++N+ +++ +L+ +PQ+ E L LPG+G
Sbjct: 61 TPFKMKELEVDEIKNLIKEIGLSNTKAKNLKAMAELLVERHQGIVPQSFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ + L GK + E+ +I P + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMTQWKLTSGKNVTETEKDAKKIFPKDKWNSLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IFYGREYSPAR 191
>gi|292558252|gb|ADE31253.1| Endonuclease III/Nth [Streptococcus suis GZ1]
Length = 227
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LF
Sbjct: 22 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFAAFP 81
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L+ + +PQT E L L G+GR
Sbjct: 82 TPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERHNGIVPQTREELEALAGVGR 141
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + E+ ++ ++PP+ AH
Sbjct: 142 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETEKRVMEVLPPELWLPAHQA 201
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR VC + P+C+
Sbjct: 202 MIYFGREVCHPKNPECEK 219
>gi|21672402|ref|NP_660469.1| endonuclease III [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008426|sp|Q8KA16|END3_BUCAP RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|21623010|gb|AAM67680.1| endonuclease III [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 209
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 144/208 (69%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ EI LF K +PK EL + + F L+++V+LSA+STDV VNK T LF+IA+T
Sbjct: 1 MNKKKRFEILSLFYKKNSNPKIELVFSSDFELLLSVILSAKSTDVMVNKITGTLFQIANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G KL++YI++IG+Y KS NII+ ++++ +++NK+P L LPG+GRK
Sbjct: 61 PQSILKLGFNKLRHYIKSIGLYNTKSLNIINSAYLIKTKYNNKVPSNRTELESLPGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN+IL++ F TI VDTH+FR++NR G A GK +VE+ +++I+P + H+W V
Sbjct: 121 TANIILNVLFNKNTIAVDTHVFRVANRTGFAKGKNVIEVEKKMIKIVPSIFKKYVHFWFV 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
LHGRYVC AR+ +C++C I LC+ K+
Sbjct: 181 LHGRYVCTARQLKCKTCFIEKLCEFDKK 208
>gi|315168690|gb|EFU12707.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1341]
Length = 394
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|257079872|ref|ZP_05574233.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis JH1]
gi|294780402|ref|ZP_06745768.1| A/G-specific adenine glycosylase [Enterococcus faecalis PC1.1]
gi|307269641|ref|ZP_07550976.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX4248]
gi|307288673|ref|ZP_07568654.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0109]
gi|256987902|gb|EEU75204.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis JH1]
gi|294452502|gb|EFG20938.1| A/G-specific adenine glycosylase [Enterococcus faecalis PC1.1]
gi|306500427|gb|EFM69763.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0109]
gi|306514031|gb|EFM82618.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX4248]
gi|315165276|gb|EFU09293.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1302]
Length = 394
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|91201636|emb|CAJ74696.1| similar to endonuclease III [Candidatus Kuenenia stuttgartiensis]
Length = 226
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 116/209 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L T + +I L +P PK L Y N L++A +L+AQ TD VNK T+ LF
Sbjct: 16 LMTEERTRKILSLLEKAYPDPKLILRYKNPLELLIATILAAQCTDERVNKVTEILFTKYK 75
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ ++ + + IR G YR K++NII+ + L F K+P+T+E L LPG+GR
Sbjct: 76 SAKEYAFAQQDVFEQEIRPTGFYRNKAKNIIACAKALEERFHGKVPETMEELLTLPGVGR 135
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L FG I VDTH+FR+S+R+ A P+KVE L RIIP K + +
Sbjct: 136 KTASVLLGNVFGKQAIAVDTHVFRVSHRLDFAKFNNPDKVEIELCRIIPQKKWTQSCLVM 195
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
HGR C ARKP C+ C++ LC +
Sbjct: 196 GTHGRLTCIARKPLCKECVVEKLCNSKDK 224
>gi|329570697|gb|EGG52414.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1467]
Length = 394
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|289177602|gb|ADC84848.1| Endonuclease III [Bifidobacterium animalis subsp. lactis BB-12]
Length = 288
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 5/206 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + P+ K +L + F L+VA +LSAQ+TD VN T LF T +
Sbjct: 53 RMHRQYETLCEFIPTVKCQLDFHTPFELLVATILSAQTTDKRVNSITPELFGTYPTAAAL 112
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +++ IR +G Y K+E+II+++ ++ F +IPQT+E LT LPG+GRK ANV
Sbjct: 113 ADARLEDVESIIRPLGFYHVKAEHIIAVARQIVERFGGQIPQTMEELTSLPGVGRKTANV 172
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
+L AF +P VDTH+ R++ R+ P ++EQ + P + + L
Sbjct: 173 VLGNAFRVPGFPVDTHVIRVTGRLHWRDDWMKTSTTPERIEQEITGCFPESEWTDLSHRL 232
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
++ GR +C +R P+C++C + C
Sbjct: 233 IIFGRNICTSRSPECENCPLLPTCPS 258
>gi|315150204|gb|EFT94220.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0012]
Length = 394
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSLFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASNRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|237750032|ref|ZP_04580512.1| endonuclease III [Helicobacter bilis ATCC 43879]
gi|229374443|gb|EEO24834.1| endonuclease III [Helicobacter bilis ATCC 43879]
Length = 212
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I LF + + EL Y N + L++AV+LSAQ TD VN T LF+
Sbjct: 1 MTKKERIANIKALFLEHYKDAQTELQYTNLYELLIAVMLSAQCTDKRVNMVTPALFKAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +++ + I+++ + K++N+I+++ + EF+ +IP + L L G+G+
Sbjct: 61 STKELSKADLGSVAEIIKSVSFFNAKAKNLIAMAKKVEIEFNGEIPTNQKDLMSLSGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L G+ + VDTH+FR+S+R+GL+ K+ E+ L + ++ H
Sbjct: 121 KSANVVLGEFLGMNYMAVDTHVFRVSHRLGLSKSKSAIDTEKDLTKAF-KENLNILHQAF 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
VL GRY CKA KP C C ++ C
Sbjct: 180 VLFGRYQCKALKPMCDDCFVAMYC 203
>gi|229549176|ref|ZP_04437901.1| A/G-specific adenine glycosylase [Enterococcus faecalis ATCC 29200]
gi|255971893|ref|ZP_05422479.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T1]
gi|256957935|ref|ZP_05562106.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis DS5]
gi|300860933|ref|ZP_07107020.1| A/G-specific adenine glycosylase [Enterococcus faecalis TUSoD Ef11]
gi|312953731|ref|ZP_07772565.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0102]
gi|229305413|gb|EEN71409.1| A/G-specific adenine glycosylase [Enterococcus faecalis ATCC 29200]
gi|255962911|gb|EET95387.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis T1]
gi|256948431|gb|EEU65063.1| A/G-specific adenine glycosylase MutY [Enterococcus faecalis DS5]
gi|300849972|gb|EFK77722.1| A/G-specific adenine glycosylase [Enterococcus faecalis TUSoD Ef11]
gi|310628358|gb|EFQ11641.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0102]
gi|315035080|gb|EFT47012.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0027]
gi|315148670|gb|EFT92686.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX4244]
gi|315151810|gb|EFT95826.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0031]
gi|315159338|gb|EFU03355.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0312]
gi|323481631|gb|ADX81070.1| A/G-specific adenine glycosylase [Enterococcus faecalis 62]
Length = 394
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|257869416|ref|ZP_05649069.1| endonuclease III [Enterococcus gallinarum EG2]
gi|257803580|gb|EEV32402.1| endonuclease III [Enterococcus gallinarum EG2]
Length = 221
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P GEL N F L++AV+LSAQ+TDV+VNK T LF
Sbjct: 1 MISKAKTMIALEQMYQMFPDAHGELISKNPFELLIAVILSAQATDVSVNKVTPTLFAAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + A +++ IRTIG+YR K++NI + + LI F+ ++P+T E L LPG+GR
Sbjct: 61 TPEALAAAPVEEIIEKIRTIGLYRNKAKNIKACASQLIERFNGQVPRTREELVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L AFGIP I VDTH+ R++ R+ + +VEQ+L++ +P H+
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVTKRLRICRLDANVLEVEQTLMKKVPEDLWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GRY C AR P+C+ C + +C+ +
Sbjct: 181 LIFFGRYHCTARAPKCEVCPLLTMCQEGQ 209
>gi|15605819|ref|NP_213196.1| endonuclease III [Aquifex aeolicus VF5]
gi|2982981|gb|AAC06594.1| endonuclease III [Aquifex aeolicus VF5]
Length = 213
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+++ ++ + ++P + + + F ++V LLS ++ D + K
Sbjct: 1 MKREDVPKVLEILKREFPKWNAPVVHMIAQHDKDPFRVLVCALLSTRTKDELTWRVCKRF 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
FE +P+ ++ + EK+++ I +G YR K++ + + ILI ++ K+P TLE L +L
Sbjct: 61 FEKVKSPEDLIKLSEKEIEELIYPVGFYRVKAKQLKEIGKILIEKYGGKVPDTLEELLKL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK AN++LS F P I VD H+ RI NR L KTP + E+ L+ I+P + +
Sbjct: 121 PGVGRKVANLVLSKGFNKPAIVVDVHVHRIVNRWCLVKTKTPEETERKLMEIVPKELWSD 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+Y LV G+ +C RKP+C+ C + C
Sbjct: 181 INYLLVAFGQTICLPRKPKCEECPVEKYC 209
>gi|227554194|ref|ZP_03984241.1| A/G-specific adenine glycosylase [Enterococcus faecalis HH22]
gi|227176693|gb|EEI57665.1| A/G-specific adenine glycosylase [Enterococcus faecalis HH22]
gi|315573825|gb|EFU86016.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0309B]
gi|315580261|gb|EFU92452.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0309A]
Length = 394
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|256854007|ref|ZP_05559372.1| A/G-specific adenine glycosylase [Enterococcus faecalis T8]
gi|307290287|ref|ZP_07570203.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0411]
gi|256710950|gb|EEU25993.1| A/G-specific adenine glycosylase [Enterococcus faecalis T8]
gi|306498708|gb|EFM68209.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0411]
gi|315030471|gb|EFT42403.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX4000]
Length = 394
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPGTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|114704391|ref|ZP_01437299.1| endonuclease III [Fulvimarina pelagi HTCC2506]
gi|114539176|gb|EAU42296.1| endonuclease III [Fulvimarina pelagi HTCC2506]
Length = 222
Score = 125 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 17 GCLYTPKELEEIFYLFSLKWP----SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
G + K++E +F S P + KG + F +V+ +LSAQS D N AT +
Sbjct: 4 GRILAKKDIETVFRRLSEAMPGRTKTAKGPKDQPDPFRSVVSCILSAQSRDTNTKAATDN 63
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF +A TP +LA+ ++ + I+ G+Y K++++ L LI E+D +PQT EGL
Sbjct: 64 LFALATTPDAILALDDEAVAKAIKPCGLYNNKTKSLKKLCTALIEEYDRTVPQTREGLMS 123
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK A++++S FG I VDTH+ R+SNRIGL KT ++ L P +
Sbjct: 124 LPGVGRKCADIVMSFTFGADVIAVDTHVHRVSNRIGLTDAKTADQTAAQLEENAPAWAFH 183
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ H+WL+ G+ +C +RKP+C++C +++LC+
Sbjct: 184 DGHFWLIQFGKAICVSRKPKCETCPVNDLCRYY 216
>gi|29377184|ref|NP_816338.1| A/G-specific adenine glycosylase [Enterococcus faecalis V583]
gi|29344650|gb|AAO82408.1| A/G-specific adenine glycosylase [Enterococcus faecalis V583]
Length = 394
Score = 125 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF + +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLREPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|257090894|ref|ZP_05585255.1| A/G-specific adenine glycosylase mutY [Enterococcus faecalis CH188]
gi|312902532|ref|ZP_07761738.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0635]
gi|256999706|gb|EEU86226.1| A/G-specific adenine glycosylase mutY [Enterococcus faecalis CH188]
gi|310634202|gb|EFQ17485.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0635]
gi|315579659|gb|EFU91850.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX0630]
Length = 394
Score = 125 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P+++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFESAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|118474773|ref|YP_891703.1| endonuclease III [Campylobacter fetus subsp. fetus 82-40]
gi|118413999|gb|ABK82419.1| endonuclease III [Campylobacter fetus subsp. fetus 82-40]
Length = 210
Score = 125 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 1/206 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++++I LF + K EL + N + L+V V+LSAQ TD VN T LF
Sbjct: 1 MRTKKDIKQIKELFLQNFSGAKSELKFKNLYELLVCVMLSAQCTDKRVNLITPELFNAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + L+ I + + K+ N+I ++ +++EF IP + L +L G+G+
Sbjct: 61 DIKSLSEANLASLKLLINSCSFFNNKAANLIKMAKSVMDEFGGDIPLEEKELIKLAGVGQ 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L + VDTH+FR+S+R+ L+ KTP E L + H +
Sbjct: 121 KTAHVVLIEHQNANLMAVDTHVFRVSHRLNLSDAKTPQATEIDLTKAF-KTELNTLHQAM 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
VL GRY CKA KPQC++C + LC
Sbjct: 180 VLFGRYTCKALKPQCENCFLKELCSS 205
>gi|91762503|ref|ZP_01264468.1| probable endonuclease III [Candidatus Pelagibacter ubique HTCC1002]
gi|91718305|gb|EAS84955.1| probable endonuclease III [Candidatus Pelagibacter ubique HTCC1002]
Length = 217
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 126/204 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + + +P+ L ++N+FTL+++VLLSAQ TD+NVN TK+++ +
Sbjct: 1 MDEKDKAKRILKILNKLYPTTPIPLDHINNFTLLMSVLLSAQCTDLNVNNVTKNIYPKYN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + +G+K+++ I++IG++R K+++I +S L+ + K+P++ E L +LPG+G
Sbjct: 61 KPEHFVKLGKKRIEKLIKSIGLFRVKAKSIYLMSKQLLEKHGGKVPKSFEELEKLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG+P VDTHI R++ R GL GK + E+ L RI P K H +
Sbjct: 121 KTASVVMSQGFGVPAFAVDTHIHRLAQRWGLTNGKNVIQTEKDLKRIFPEKTWSKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR CKAR+ +C I C
Sbjct: 181 IYYGREFCKARECYGLTCKICTTC 204
>gi|307135815|gb|ADN33687.1| A/G-specific adenine DNA glycosylase [Cucumis melo subsp. melo]
Length = 401
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 85/237 (35%), Gaps = 16/237 (6%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---------HFTLIV 53
S S S +++ ++ I + + +L + + + + V
Sbjct: 33 SRSPSKSEAVVDIEDIMFSIDNVQTIRASLLDWYDRSRRDLPWRSLDKGEPETRAYGVWV 92
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+ ++ Q+ V + T Q + +++ +G YR+
Sbjct: 93 SEIMLQQTRVQTVVQFYNRWMLKWPTVQHLSRASLEEVNEMWAGLGYYRRARFLFEGAKM 152
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
I+ + L ++PGIG A I S+AFG VD ++ R+ R+ G
Sbjct: 153 IVKEGGRFPKTVS--SLRKIPGIGEYTAGAIASIAFGEVVPVVDGNVIRVIARLKAISGN 210
Query: 174 TP-----NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+V ++ +++ + + L+ G +C P C +C + + C+ +
Sbjct: 211 PKDPKLIKQVWKAAAQLVDLSRPGDFNQALMELGATLCTPTNPSCSTCPVFDHCEAL 267
>gi|317488242|ref|ZP_07946810.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325830754|ref|ZP_08164138.1| endonuclease III [Eggerthella sp. HGA1]
gi|316912654|gb|EFV34195.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325487161|gb|EGC89604.1| endonuclease III [Eggerthella sp. HGA1]
Length = 220
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 126/216 (58%), Gaps = 5/216 (2%)
Query: 14 SPLGCLY-TPKELEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATK 71
P + + + + +P+ + L+ + + F L +AVLLSAQ+TD VNK T
Sbjct: 1 MPRETMTAKRQRALAVAERMNEHYPAAECALHYWGDPFRLTIAVLLSAQTTDKGVNKVTP 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L+E TP + A + ++ IRTIG + K+ N+I + +++ ++ +IP+ ++ L
Sbjct: 61 ALWERYPTPADLAAADVRDVEGIIRTIGFFHTKAANVIKCAQMVVADYGGEIPRDIDELQ 120
Query: 132 RLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPP 188
+LPG+GRK ANV+L+ AFGI I VDTH+FRI++R+ A TP K E +LL++ P
Sbjct: 121 KLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHRLKFAGPSADTPAKTEAALLKLYPR 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ ++ VL GR C AR P+C +C + +LC
Sbjct: 181 EYWGPINHQWVLFGRETCIARNPKCATCFLCDLCPS 216
>gi|146320661|ref|YP_001200372.1| EndoIII-related endonuclease [Streptococcus suis 98HAH33]
gi|145691467|gb|ABP91972.1| Predicted EndoIII-related endonuclease [Streptococcus suis 98HAH33]
Length = 227
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LF
Sbjct: 22 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFAAFP 81
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L+ + +PQT E L L G+GR
Sbjct: 82 TPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERHNGIVPQTREELEALAGVGR 141
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + E+ ++ ++PP+ AH
Sbjct: 142 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETEKRVMEVLPPELWLPAHQA 201
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR VC + P+C+
Sbjct: 202 MIYLGREVCHPKNPECEK 219
>gi|332974269|gb|EGK11201.1| A/G-specific adenine glycosylase [Desmospora sp. 8437]
Length = 385
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++ + + + +L + + + + V+ ++ Q+ V + + TP
Sbjct: 24 IQAVREKLLDWYDRNRRDLPWRENKDPYRIWVSEIMLQQTRVDTVIPYYERFMSLFPTPG 83
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ A E ++ +G Y ++ N+ + ++ + K+P ++RL G+G A
Sbjct: 84 ELAAAEEDEVIKAWEGLGYYS-RARNLHTAVKEVVETYGGKVPDDPAAVSRLKGVGPYTA 142
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ P VD ++FR+ +R T K E+ +IP + +
Sbjct: 143 GAILSIAYNRPVPAVDGNVFRVLSRWFALRDDVTRTSTRRKFEELDRLLIPEDRPGDFNQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ G +C P C C + C+
Sbjct: 203 ALMELGALICIPVSPACADCPVQGECQA 230
>gi|57641076|ref|YP_183554.1| endonuclease III [Thermococcus kodakarensis KOD1]
gi|57159400|dbj|BAD85330.1| endonuclease III [Thermococcus kodakarensis KOD1]
Length = 246
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K E+I + P K L + + +V ++S + D + + LF+
Sbjct: 22 KKKRAEKIVEILMKTHPREK--LLIGDPYRTLVHCIISQRMRDEVTYRVWEELFKKYKDI 79
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSE--NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++Q ++R G+ K++ I+ S I++ + K+P + L +LPGIGR
Sbjct: 80 ETIANTPVEEMQEFLRKQGVGLWKTKGEWIVKASKIILERYGGKVPDDIHELMKLPGIGR 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG I VDTH+ RIS R+GLAP + P KVE+ L +IP + ++
Sbjct: 140 KCANIVLAYGFGKQAIPVDTHVNRISKRLGLAPPRVAPEKVEEYLTALIPKEKWIYVNHA 199
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+V HGR +C+ P+C+ C + C K
Sbjct: 200 MVDHGRSICRPINPKCEECPLREFCPYAK 228
>gi|315174957|gb|EFU18974.1| A/G-specific adenine glycosylase [Enterococcus faecalis TX1346]
Length = 394
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++P ++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 10 WSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVIDYFYRFMEW 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + KL +G Y ++ N+ + +++EF K+P T+E + L GI
Sbjct: 70 FPTIQDLAEAPDDKLLKAWEGLGYYS-RARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF +P +D ++ R+ +R+ +A + E ++L+II +
Sbjct: 129 GPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC P+C+SC + C +
Sbjct: 189 GDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQ 223
>gi|213963745|ref|ZP_03391995.1| probable endonuclease III [Capnocytophaga sputigena Capno]
gi|213953625|gb|EEB64957.1| probable endonuclease III [Capnocytophaga sputigena Capno]
Length = 209
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ I +P L + + +TL++AVLLSAQ+TD VN+ T LF AD
Sbjct: 1 MKKAEKVKFIIDTLESIYPEITIPLQHKDPYTLLIAVLLSAQTTDARVNQITPILFSKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++ I+ +G+ KS+ I LS ILI++++ ++PQT E L LP +G
Sbjct: 61 NPYDMVLLSVDEIHEIIKPLGLAPMKSKGIHGLSQILIDKYNGEVPQTFEALESLPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L+ AFGIPT VDTHI R+ +R L+ G + + E+ R+ P + H +
Sbjct: 121 KTASVVLAQAFGIPTFPVDTHIHRLMHRWKLSDGSSVIQTEKDAKRLFPKEKWNKLHVQI 180
Query: 199 VLHGRYVCKAR 209
+L+GR AR
Sbjct: 181 ILYGREYSPAR 191
>gi|87308869|ref|ZP_01091008.1| A/G-specific adenine glycosylase [Blastopirellula marina DSM 3645]
gi|87288580|gb|EAQ80475.1| A/G-specific adenine glycosylase [Blastopirellula marina DSM 3645]
Length = 358
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + + +L + + + + ++ ++ Q+ V +
Sbjct: 1 MPNSAWLRKFQRQILAWYGGAARDLPWRADRDPYRVWISEIMLQQTQVATVRAYFERFSA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + A E ++ +G YR ++ + + + ++ +E K P+ + LPG
Sbjct: 61 AFPTVTDLAAADEAEVLRLWEGLGYYR-RARQLHAAAQVIADEHRGKFPREFAAILALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV------EQSLLRIIPPK 189
+GR A I S+A+ P ++ + R+ R+ LA + P K Q I+P +
Sbjct: 120 VGRYTAGAICSIAYDQPAPILEANTIRLHARL-LAYREDPTKTAGQRLLWQFAEHILPTE 178
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + L+ G +C R PQC C ++ LC+ ++
Sbjct: 179 DVSSFNQALMELGSEICTPRNPQCGVCPVATLCQAKRE 216
>gi|15672823|ref|NP_266997.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp. lactis
Il1403]
gi|12723767|gb|AAK04939.1|AE006318_2 A/G-specific adenine glycosylase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406387|gb|ADZ63458.1| A/G-specific adenine glycosylase [Lactococcus lactis subsp. lactis
CV56]
Length = 387
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++E + K L + + + ++ ++S Q+ V + +
Sbjct: 3 WSKNQIKEFQQDLLSWYDDNKKPLPWRKTTEPYKIWISEIMSQQTQVETVMPYYERFMKK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +L +G Y ++ N+ + ++++++ K P L + L GI
Sbjct: 63 YPTIETLAQADDAELLKLWEGLGYYS-RARNLKIAAQEVVDKYNGKFPDNLADILSLKGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG+ +D ++ R+++R ++ + + L ++I K
Sbjct: 122 GPYTAAAIASISFGLAEPAIDGNLMRVTSRLFELDCDISKSSSRKIFDGYLRKLISKKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC + P+C++C + N C
Sbjct: 182 GDFNQALMDLGSLVCSPKSPKCEACPLLNYC 212
>gi|257064026|ref|YP_003143698.1| endonuclease III [Slackia heliotrinireducens DSM 20476]
gi|256791679|gb|ACV22349.1| endonuclease III [Slackia heliotrinireducens DSM 20476]
Length = 210
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 3/206 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
I + + L + + F+L VAV+LSAQ TD VNK T LF TP
Sbjct: 2 RARAAAIEERLFAIYGEGECSLDHADPFSLTVAVILSAQCTDAAVNKVTPALFAKYPTPA 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + +++ I +G + K++N+I+ + ++ ++ +IP+++EGL LPG+GRK A
Sbjct: 62 DLAAAKLQDVEDIIHPLGFFHSKAKNLIACAQKVVADYGGEIPESMEGLQSLPGVGRKTA 121
Query: 142 NVILSM-AFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
NV++ I VDTH+FRI++R+G A TP+KVE LL++ P ++
Sbjct: 122 NVVMCQAFRNAQGIAVDTHVFRIAHRLGFATRNDDTPDKVEAKLLKVYPQTDWLYINHQW 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
V GR C AR P+C +C I +LC R
Sbjct: 182 VHFGREFCSARNPKCLTCPIHDLCPR 207
>gi|11066943|gb|AAG28772.1|AF300990_1 endonuclease III [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
Length = 181
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 135/181 (74%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+TP ML +G + +++YI+TIG+
Sbjct: 1 TELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKSYIKTIGL 60
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ K+EN+I HIL+++ + ++P+ L LPG+GRK ANV+L+ AFG PTI VDTHI
Sbjct: 61 FNSKAENVIKTCHILLDKHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHI 120
Query: 161 FRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
FR+ NR APGK +VE+ LL+++P + + + H+WL+LHGRY C ARKP+C SC+I +
Sbjct: 121 FRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLILHGRYTCIARKPRCGSCLIED 180
Query: 221 L 221
L
Sbjct: 181 L 181
>gi|254413445|ref|ZP_05027215.1| A/G-specific adenine glycosylase [Microcoleus chthonoplastes PCC
7420]
gi|196179552|gb|EDX74546.1| A/G-specific adenine glycosylase [Microcoleus chthonoplastes PCC
7420]
Length = 373
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 14/229 (6%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSA 59
+ K +DS+ G P+ + +E + + +L + + + + ++ ++
Sbjct: 4 NQKSADSFAG-LPISSVENQRE------TLLTWYANACRDLPWRGSTDPYPIWISEIMLQ 56
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V T + + +++ + +G Y ++ N+ + +I ++
Sbjct: 57 QTQVKTVIPYYHRWLAEFPTIETLATADLQQVLLVWQGLGYYS-RARNLHKAAQQIIQDY 115
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
P L + LPGIGR A ILS AF P +D ++ RI R+ +
Sbjct: 116 GGIFPDQLSDVLALPGIGRTTAGGILSAAFNQPVPILDGNVKRILARLVALSVPPAKATK 175
Query: 180 QSLL---RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ P+H + L+ G +C + P C C + C+
Sbjct: 176 KLWQLSESLLDPEHPGTFNQALMDLGATICTPKNPDCCHCPWQSHCQAY 224
>gi|325570288|ref|ZP_08146154.1| endonuclease III [Enterococcus casseliflavus ATCC 12755]
gi|325156771|gb|EGC68945.1| endonuclease III [Enterococcus casseliflavus ATCC 12755]
Length = 218
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ +P GEL N F L++AV+LSAQ+TDV+VNK T LFE
Sbjct: 1 MISKEKTMIAIETMYEMFPEAHGELVSKNAFELLIAVILSAQATDVSVNKVTPALFEAYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + + + I++IG+YR K++NI + + L+ F ++P+T E L LPG+GR
Sbjct: 61 TPQALSEAPLEDVIAKIKSIGLYRNKAKNIKACASELLLRFGGEVPKTREDLVSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L A+GIP I VDTH+ R+S R+ + +VEQ+L++ IP H+
Sbjct: 121 KTANVVLGDAYGIPAIAVDTHVERVSKRLRICKLDANVLEVEQTLMKKIPEPLWVKTHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ GRY C AR P+C+ C + +C+ K
Sbjct: 181 MIFFGRYHCTARAPKCEICPLLAMCQEGK 209
>gi|294794388|ref|ZP_06759524.1| A/G-specific adenine glycosylase [Veillonella sp. 3_1_44]
gi|294454718|gb|EFG23091.1| A/G-specific adenine glycosylase [Veillonella sp. 3_1_44]
Length = 365
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 87/215 (40%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K EL + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKNPKWVPQLLAWYDVHKRELPWRGCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ + + +G Y ++ N+ ++ + +P + + L G+
Sbjct: 61 FPTLEDLAKASEDEVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPHDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P + VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEVAVDGNVLRIYARLYRIFDDILSTKGKKAITAIVEETLPHDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C+ +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCEAYQ 214
>gi|315652208|ref|ZP_07905203.1| endonuclease III [Eubacterium saburreum DSM 3986]
gi|315485514|gb|EFU75901.1| endonuclease III [Eubacterium saburreum DSM 3986]
Length = 209
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
T L+ I + K L Y + L+ A +LSAQ TD VN T+ L++ D
Sbjct: 1 MTDSRLQNILDKLDKAYGTEKKMYLEYNTPWQLLFATILSAQCTDARVNIVTRDLYKKYD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +K + +++ I +IG Y K++N+I+ + L+++F+ ++P L+ L LPG+GR
Sbjct: 61 SLEKFASASIVEMERDIHSIGFYHNKAKNLIACARKLLSDFNGEVPSDLDSLLTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANVI F +P+I VDTH+ RI+ ++GL + P K+E L+ I+P H + L
Sbjct: 121 KTANVIRGNIFDMPSIVVDTHVKRITKKLGLTESEDPVKIEFELMEILPKDHWILWNTDL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GR +C AR+ +C C + C K
Sbjct: 181 ITLGRTICIARREKCDICFLREECPSAK 208
>gi|170748804|ref|YP_001755064.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
radiotolerans JCM 2831]
gi|170655326|gb|ACB24381.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
radiotolerans JCM 2831]
Length = 239
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 115/200 (57%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I + + P PK + F L+V VLLSAQST V++ + LF A P
Sbjct: 32 DRVTTILARLAERDPDPKAGFDRTDPFRLLVTVLLSAQSTGPTVSRIAEALFSEARDPAG 91
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M A+GE ++ +R +G+ K+ NI+ LS +L+ E +P + + RLPGIGRK A
Sbjct: 92 MAALGEARITEIVRPVGLGPSKARNIVKLSAVLLAEHGGAVPCSAAEMRRLPGIGRKSAE 151
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V + AF P I VDTHIFRISNRI LAPG T + V L RI+P + NAH WL HG
Sbjct: 152 VTANFAFHEPVIAVDTHIFRISNRIPLAPGPTVDAVADGLARIVPDAFKDNAHVWLFRHG 211
Query: 203 RYVCKARKPQCQSCIISNLC 222
R +C AR P C C +S+LC
Sbjct: 212 RDICTARNPACPRCPVSDLC 231
>gi|71083071|ref|YP_265790.1| endonuclease III [Candidatus Pelagibacter ubique HTCC1062]
gi|71062184|gb|AAZ21187.1| probable endonuclease III [Candidatus Pelagibacter ubique HTCC1062]
Length = 217
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 126/204 (61%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I + + +P+ L ++N+FTL+++VLLSAQ TD+NVN TK+++ +
Sbjct: 1 MDEKDKAKTILKILNKLYPTTPIPLDHINNFTLLMSVLLSAQCTDLNVNNVTKNIYPKYN 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + +G+K+++ I++IG++R K+++I +S L+ + K+P++ E L +LPG+G
Sbjct: 61 KPEHFVKLGKKRIEKLIKSIGLFRVKAKSIYLMSKQLLEKHGGKVPKSFEELEKLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG+P VDTHI R++ R GL GK + E+ L RI P K H +
Sbjct: 121 KTASVVMSQGFGVPAFAVDTHIHRLAQRWGLTNGKNVIQTEKDLKRIFPEKTWSKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ +GR CKAR+ +C I C
Sbjct: 181 IYYGREFCKARECYGLTCKICTTC 204
>gi|20093393|ref|NP_619468.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918762|gb|AAM07948.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 216
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+L+E+ +P + + F ++++ ++S ++ D A + LFE TP++M
Sbjct: 14 DLDELMRRLFELYPEGYTD-GSRDPFFVLISTVMSHRTRDDVTYPAARKLFERFSTPEEM 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++++ I+ +G YR KS I +S IL+ E+D ++P +E L +LPG+GRK AN
Sbjct: 73 VGADVEEIEALIKDVGFYRVKSGRIKEISGILLEEYDGEVPDDMETLLKLPGVGRKTANC 132
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AF + VDTH+ RISNR+GL KTP + E L +I P K+ + + LV G+
Sbjct: 133 VLAHAFLKDALAVDTHVHRISNRLGLVETKTPEETELELKKIFPQKYWKHINLLLVKLGQ 192
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
+C+ P+C+ C+++++C +I
Sbjct: 193 NICRPISPKCEVCVLNDMCPKI 214
>gi|169827624|ref|YP_001697782.1| endonuclease III [Lysinibacillus sphaericus C3-41]
gi|168992112|gb|ACA39652.1| Probable endonuclease III [Lysinibacillus sphaericus C3-41]
Length = 220
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ E +P+ EL + N F L +A LLSAQ TDV VNK TK LF+
Sbjct: 1 MLTKKQWEHCLEEMDRMFPNAHCELVHDNAFELTIATLLSAQCTDVLVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI +L L++E++ +IP T E L LPG+GR
Sbjct: 61 TPEDYLAVPLEELQQDIRSIGLYRNKAKNIQALCQRLLDEYNGEIPATREALVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF IP + VDTH+ R+S R+GL + +VE+++++ P H+
Sbjct: 121 KTANVVLSVAFDIPALAVDTHVERVSKRLGLCRWKDSVLEVEETIMKKTPMDKWSKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P C +C + + C+ ++
Sbjct: 181 LIFFGRYHCKAQNPGCHACPLLSDCREGQK 210
>gi|146300193|ref|YP_001194784.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacterium
johnsoniae UW101]
gi|146154611|gb|ABQ05465.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacterium
johnsoniae UW101]
Length = 218
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 108/191 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + +P+ L + + +TL++AVLLSAQ TDV VN+ T LF AD
Sbjct: 1 MNKEARVQFVINTLKELYPTIPVPLDHKDPYTLLIAVLLSAQCTDVRVNQITPLLFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ IR G+ KS+ I LS ILI + + ++PQ+ E L LP +G
Sbjct: 61 NPYDMVKMSIEEIKEIIRPCGLSPMKSKGIHGLSEILIEKHNGEVPQSFEALEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ +R L+ GK+ + E+ R+ P + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMHRWNLSNGKSVAQTEKDAKRLFPRDLWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|313894338|ref|ZP_07827903.1| A/G-specific adenine glycosylase [Veillonella sp. oral taxon 158
str. F0412]
gi|313441162|gb|EFR59589.1| A/G-specific adenine glycosylase [Veillonella sp. oral taxon 158
str. F0412]
Length = 365
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K EL + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKNPKWVPQLLAWYDVHKRELPWRDCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ + + +G Y ++ N+ ++ + +P+ + + L G+
Sbjct: 61 FPTLEDLAKASEDEVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPRDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P + VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEVAVDGNVLRIYARLYHIFDDILSTKGKKAITAIVEETLPHDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C+ +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCEAYQ 214
>gi|225012760|ref|ZP_03703194.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacteria bacterium
MS024-2A]
gi|225003034|gb|EEG41010.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacteria bacterium
MS024-2A]
Length = 215
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 116/191 (60%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + +P L + + +TL++AVLLSAQSTDV VNK T LFE A
Sbjct: 1 MTKKEKVVFVMDTLERLYPEIPIPLDHKDPYTLLIAVLLSAQSTDVRVNKITSLLFERAS 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M+ + ++++ IR +G+ KS+ I LSHIL+N+ + K+PQ LE L LP +G
Sbjct: 61 TPEEMVKLSIDEIRSIIRPVGLSPMKSKGIYGLSHILLNKHNGKVPQDLEALEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG+P+ VDTHI R+ R GL+ GK + E+ R+ P + + H +
Sbjct: 121 KTASVVMAQAFGVPSFPVDTHIHRLMYRWGLSNGKNVMQTEKDAKRLFPEEKWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|298241857|ref|ZP_06965664.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
gi|297554911|gb|EFH88775.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
Length = 327
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 95/223 (42%), Gaps = 9/223 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKA 69
SP+ P + + + + +L + + + ++V+ ++ Q+ V
Sbjct: 7 PSPISSQLAPDHITRAQSDLLRWYAAEQRDLPWRRTSDPYAILVSEIMLQQTQVDRVLPK 66
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ T + + N +G + + +++ ++ ++D +IP T+EG
Sbjct: 67 YQQFLSAFPTLADLAVAPTADVINVWVPLGYNMRAVR-LQAIAQQVMAQYDGRIPDTIEG 125
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----R 184
L L GIGR A I A+ VDT+I R+ +RI + + + + + +
Sbjct: 126 LLSLKGIGRYTAGAIACFAYHKQVATVDTNIRRVLHRIFIGVEQPETALNDAAMLALAEQ 185
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++PP YN + L+ G +C + P+C +C + CK ++
Sbjct: 186 VLPPGEAYNWNQALMDMGATICTSNNPRCMACPLQEPCKAYQE 228
>gi|256820984|ref|YP_003142263.1| DNA-(apurinic or apyrimidinic site) lyase [Capnocytophaga ochracea
DSM 7271]
gi|256582567|gb|ACU93702.1| DNA-(apurinic or apyrimidinic site) lyase [Capnocytophaga ochracea
DSM 7271]
Length = 209
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +P L + + +TL++AVLLSAQ+TD VN+ T LF AD
Sbjct: 1 MKKAEKVNFIIDTLESIYPEITIPLQHKDPYTLLIAVLLSAQTTDARVNQITPILFSKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++Q I+ +G+ KS+ I LS ILI++++ ++PQT E L LP +G
Sbjct: 61 NPYDMVLLSVDEIQEIIKPLGLAPMKSKGIHGLSQILIDKYNGEVPQTFEALEALPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L+ AFGIPT VDTHI R+ +R L+ G + + E+ R+ P + H +
Sbjct: 121 KTASVVLAQAFGIPTFPVDTHIHRLMHRWKLSDGSSVVQTEKDAKRLFPKEKWNKLHVQI 180
Query: 199 VLHGRYVCKAR 209
+L+GR AR
Sbjct: 181 ILYGREYSPAR 191
>gi|325958693|ref|YP_004290159.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
gi|325330125|gb|ADZ09187.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
Length = 216
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L +E I + E + F +++ +LS ++ D N + A+ LF
Sbjct: 3 LIKISRIESIIVNLEDIY--TLREFEDSDPFRVLIRTILSQRTRDENTDAASAMLFSKYS 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+++ ++++ I+ G Y K+ + +S I+ ++++ +P+ + L LPG+GR
Sbjct: 61 TPEEIANAPTEEVEKLIKKSGFYHVKASRVREVSRIIHEDYNDTVPEDMAELLSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN +L F I VD H+ RISNRIGL TP++ E+ L++I+P K +
Sbjct: 121 KTANCVLVYGFHKDAIPVDVHVHRISNRIGLVNTGTPDETEEKLMKIVPKKFWLPLNDLF 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V G+ +CK P+ + C I+ C K
Sbjct: 181 VQFGQTICKPIGPKHEICPIAEYCDYYK 208
>gi|120436135|ref|YP_861821.1| endonuclease III [Gramella forsetii KT0803]
gi|117578285|emb|CAL66754.1| endonuclease III [Gramella forsetii KT0803]
Length = 218
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + + +P L + + +TL++AVLLSAQSTDV VN+ T LF+IAD
Sbjct: 1 MTKQEKVQFVIDTLNDIYPEIPVPLDHKDPYTLLIAVLLSAQSTDVKVNQITPILFQIAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P KM+ + ++++ IR +G+ KS+ I LS ILI +++ ++P + + L LP +G
Sbjct: 61 NPYKMVKLTVEEIREIIRPVGLSPMKSKGIHGLSEILIEKYNGEVPVSFDALEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AF IP VDTHI R+ R L+ GK + E+ R+ P H +
Sbjct: 121 KTASVVMAQAFNIPAFPVDTHIHRLMYRWNLSNGKNVKQTEKDAKRLFPKDLWNKLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRQYSPAR 191
>gi|288817355|ref|YP_003431702.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288786754|dbj|BAI68501.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308750962|gb|ADO44445.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobacter
thermophilus TK-6]
Length = 216
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 20 YTPKELEEIFYLFSLKWPS---PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+++E++ + ++P P L + F ++V L+S ++ D K L
Sbjct: 1 MRKEDVEKVIDILRREFPRWNAPVVSLIAQKTGDPFRVLVCALISTRTKDETTAMVCKRL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
FE + I E++L + +G Y+ K++ + S++ + + +++P LE L +L
Sbjct: 61 FERIKNVDDLYNIDEEELSRLLYPVGFYKNKAKFLKSIAEEIKKNYSSQVPNKLEDLLKL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++LS +GIP I VDTH+ RI+NR L K P + E+ L I+P K+
Sbjct: 121 KGVGRKVANLVLSEGYGIPAICVDTHVHRITNRWCLIKSKDPEETERKLTEILPEKYWIE 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +CK KP C C I C+
Sbjct: 181 FNKLLVAFGQTLCKPVKPLCGVCPIREYCEY 211
>gi|118403607|ref|NP_001072831.1| mutY homolog [Xenopus (Silurana) tropicalis]
gi|112418500|gb|AAI21893.1| hypothetical protein MGC145569 [Xenopus (Silurana) tropicalis]
Length = 520
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 85/246 (34%), Gaps = 24/246 (9%)
Query: 4 SKKSDSYQGNSPLGCLY--------TPKELEEIFYLFSLKWPSPKGELYYVN-------- 47
+KS + T +E E I + K +L +
Sbjct: 19 KRKSPKQAFPKREEHVLQSSIYHSFTSQETEIIRDKLLAWYDKSKRDLPWRTMACTEPDL 78
Query: 48 ---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + V+ ++ Q+ V ++ T + + +++ +G Y +
Sbjct: 79 DRKAYAVWVSEVMLQQTQVATVIDYYNKWMKVWPTMEDLARSSLEEVNEMWSGLGYYSRG 138
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+++ + E LPG+GR A I S+++G T VD ++ R+
Sbjct: 139 RRLQEGAKKVVLELGGSMPRSADELQKLLPGVGRYTAGAIASISYGQVTGVVDGNVIRVL 198
Query: 165 NRIGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+R+ +K+ ++ P + + ++ G VC +KP C +C +
Sbjct: 199 SRLRCIGADSSTLAVSDKLWNLANALVDPDRPGDFNQGMMELGATVCTPKKPLCTACPLQ 258
Query: 220 NLCKRI 225
CK
Sbjct: 259 GQCKAY 264
>gi|33240330|ref|NP_875272.1| putative endonuclease [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237857|gb|AAP99924.1| Endonuclease III [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 217
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 114/202 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I K+P+P LY+ N +TL+VAVLLSAQSTD VN+ T LF+ D
Sbjct: 1 MNQLQRAKLIMTRLDEKYPNPPIPLYHTNTYTLLVAVLLSAQSTDKKVNEITPELFKRGD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +G+K + I+ +G+ + KS+NI +LS + EF+N +P+ E L PG+G
Sbjct: 61 NAKDLYNLGQKGIYECIKQLGLAKTKSKNIYNLSKSIAREFNNIVPKGFEILESFPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFG P+ VDTHI R++ R GL GK+ + E L RI P H +
Sbjct: 121 KTASVVMAQAFGEPSFPVDTHIHRLAQRWGLTSGKSVKQTEVDLKRIFPKDQWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IFYGREYCSARGCNGTKCELCK 202
>gi|315224185|ref|ZP_07866025.1| endonuclease III [Capnocytophaga ochracea F0287]
gi|314945918|gb|EFS97927.1| endonuclease III [Capnocytophaga ochracea F0287]
Length = 209
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +P L + + +TL++AVLLSAQ+TD VN+ T LF AD
Sbjct: 1 MKKAEKVNFIIDTLESIYPEITIPLQHKDPYTLLIAVLLSAQTTDARVNQITPILFSKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++Q I+ +G+ KS+ I LS ILI++++ ++PQT E L LP +G
Sbjct: 61 NPYDMVLLSVDEIQEIIKPLGLAPMKSKGIHGLSKILIDKYNGEVPQTFEALEALPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L+ AFGIPT VDTHI R+ +R L+ G + + E+ R+ P + H +
Sbjct: 121 KTASVVLAQAFGIPTFPVDTHIHRLMHRWKLSDGSSVVQTEKDAKRLFPKEKWNKLHVQI 180
Query: 199 VLHGRYVCKAR 209
+L+GR AR
Sbjct: 181 ILYGREYSPAR 191
>gi|229826643|ref|ZP_04452712.1| hypothetical protein GCWU000182_02019 [Abiotrophia defectiva ATCC
49176]
gi|229789513|gb|EEP25627.1| hypothetical protein GCWU000182_02019 [Abiotrophia defectiva ATCC
49176]
Length = 215
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++EI ++ + L + N + L+ A +LSAQ TD VN TK LF
Sbjct: 7 KERERIDEIIRRLIERYGGESRTYLEHNNAWQLLFATILSAQCTDARVNIVTKDLFRKYK 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + K+++ I + G Y K++NII+ + +L++E+ ++P+ LE L LPG+GR
Sbjct: 67 TLEDFAGADLKEMEKDIYSTGFYHNKAKNIIACARMLLSEYGGEVPKELEKLIVLPGVGR 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+ F IP+I VDTH+ RIS ++G+ + P K E L+ ++P + +
Sbjct: 127 KTANVVRGNIFDIPSIVVDTHVKRISKKLGITTTEDPVKAEFELMEVLPESVWIIWNLDV 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ GR +C A P+C C ++++C K
Sbjct: 187 IALGREICVAGTPKCDRCFLADVCPSCK 214
>gi|149371348|ref|ZP_01890834.1| endonuclease III [unidentified eubacterium SCB49]
gi|149355486|gb|EDM44045.1| endonuclease III [unidentified eubacterium SCB49]
Length = 219
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P L + + +TL++AVLLSAQSTDV VNK T LFE+AD
Sbjct: 1 MTKQEKVDFVITTLKELYPQIPIPLDHKDPYTLLIAVLLSAQSTDVRVNKITPLLFEVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ I+ +G+ K++ I LSH+LI+ + +P+++E L + P +G
Sbjct: 61 NPYDMIKLSIDEIREIIKPVGLSPMKAKGIHGLSHMLIDNHNGIVPKSIEELEKFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R GL GK + E+ R+ P + H +
Sbjct: 121 KTASVVVSQAFGIPAFPVDTHIHRLMYRWGLTNGKNVVQTEKDAKRLFPEHVWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRQYSPAR 191
>gi|332295428|ref|YP_004437351.1| DNA-(apurinic or apyrimidinic site) lyase [Thermodesulfobium
narugense DSM 14796]
gi|332178531|gb|AEE14220.1| DNA-(apurinic or apyrimidinic site) lyase [Thermodesulfobium
narugense DSM 14796]
Length = 215
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 106/199 (53%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
EI +P K L + F VA++L+AQ TD VN TK LF+ + + + +I
Sbjct: 11 EILRKLDKLYPEIKSNLNFNTPFEFYVAIVLAAQCTDEKVNAVTKELFKRIKSFEDLDSI 70
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++L+ I G Y K++ + + +I F++ +P + L ++PG+GRK A IL
Sbjct: 71 PLEELEEAIHPTGFYHNKAKALKEGAKYIIKNFNSTLPNNFDDLIKIPGLGRKSAYAILG 130
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
F I VDTH+ R++ R+GL P VE+ + + K + Y L HGR +C
Sbjct: 131 YVFNKSAIVVDTHVKRLAVRLGLVKKGDPITVEKEIALNVEEKDWFKLSYMLNQHGRLMC 190
Query: 207 KARKPQCQSCIISNLCKRI 225
A+ P+CQ CI++++C ++
Sbjct: 191 TAKNPKCQECILNDICPKV 209
>gi|57168167|ref|ZP_00367306.1| endonuclease III [Campylobacter coli RM2228]
gi|305431686|ref|ZP_07400855.1| endonuclease III [Campylobacter coli JV20]
gi|57020541|gb|EAL57210.1| endonuclease III [Campylobacter coli RM2228]
gi|304445281|gb|EFM37925.1| endonuclease III [Campylobacter coli JV20]
Length = 208
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+
Sbjct: 2 KRNSEIKELFLKHFDKPTTELKFSNLYELLVCVMLSAQCTDKRVNLITPELFKAYPDITS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI++ Y K++N+I ++ + F+ +IP E L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQSCSFYNNKAQNLIKMAQSVRENFNAEIPLDEEKLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L RI + H +VL G
Sbjct: 122 VVLIEWCGANCMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|315230941|ref|YP_004071377.1| endonuclease III [Thermococcus barophilus MP]
gi|315183969|gb|ADT84154.1| endonuclease III [Thermococcus barophilus MP]
Length = 236
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +I +P + + + F ++ ++S ++ D ++ ++ LF T
Sbjct: 19 KKERALKIVKKLIEMYPRDRI--LHGDPFFTLIRCIISQRNRDEVTDRVSELLFNRYPTV 76
Query: 81 QKMLAIGEKKLQNYIRTIG--IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +Q +R G +++ K + I+ S I++ ++ K+P LE L +LPGIGR
Sbjct: 77 HALANAKIEDVQKLLRENGVGLWKNKGKWIVECSRIILEKYGGKVPDMLEELVKLPGIGR 136
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG I VDTH+ RIS R+GLAP K P KVE+ L +IP + ++
Sbjct: 137 KCANIVLAYGFGKQAIPVDTHVNRISKRLGLAPPKAPPEKVEEYLKELIPKELWIYVNHA 196
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+V HG+ +C+ P+C C + LC K
Sbjct: 197 MVDHGKAICRPISPRCDECPLKTLCPYAK 225
>gi|289548443|ref|YP_003473431.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
gi|289182060|gb|ADC89304.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
Length = 219
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 6/214 (2%)
Query: 20 YTPKELEEIFYLFSLKWPS---PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + ++ + ++ P L + F ++V LLS ++ D + L
Sbjct: 1 MEKEHVPQVISILREEFKKWNAPVVSLIAQKTGDPFRVLVCALLSTRTKDEVTAQVCSKL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + ++ I E++L + I +G YR K++ + L+ L EF K+P +E L +L
Sbjct: 61 FSRIRSIDDLINIPEEELASLIYPVGFYRNKAKFLKRLAEELKKEFAGKVPDRIEDLLKL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++L+ F P I VDTH+ RI+NR L KTP + E++L+ ++P ++
Sbjct: 121 KGVGRKVANLVLADGFNKPAICVDTHVHRITNRWSLVKTKTPYQTEKALMEVLPIEYWQE 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ LV G+ +C+ KP C C I + C K+
Sbjct: 181 FNRLLVAFGQTICRPVKPLCHKCPIRDYCDFFKK 214
>gi|86153567|ref|ZP_01071771.1| endonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121613661|ref|YP_001000296.1| endonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|167005248|ref|ZP_02271006.1| endonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|85843293|gb|EAQ60504.1| endonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87250028|gb|EAQ72986.1| endonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
Length = 208
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + F +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFGGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L I + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTGIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|126651184|ref|ZP_01723394.1| Nth [Bacillus sp. B14905]
gi|126592022|gb|EAZ86088.1| Nth [Bacillus sp. B14905]
Length = 220
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ E +P+ EL + N F L +A LLSAQ TDV VNK TK LF+
Sbjct: 1 MLTKKQWEHCLEEMDRMFPNAHCELVHDNAFELTIATLLSAQCTDVLVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI +L L++E++ +IP T E L LPG+GR
Sbjct: 61 TPEDYLAVPLEELQQEIRSIGLYRNKAKNIQALCQRLLDEYNGEIPATREALVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF IP + VDTH+ R+S R+GL + +VE+++++ P H+
Sbjct: 121 KTANVVLSVAFDIPALAVDTHVERVSKRLGLCRWKDSVLEVEETIMKKTPMDKWSKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P C +C + + C+ ++
Sbjct: 181 LIFFGRYHCKAQNPGCHTCPLLSDCREGQK 210
>gi|284925856|gb|ADC28208.1| endonuclease III [Campylobacter jejuni subsp. jejuni IA3902]
Length = 208
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L I + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTGIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|283956007|ref|ZP_06373496.1| endonuclease III [Campylobacter jejuni subsp. jejuni 1336]
gi|283792483|gb|EFC31263.1| endonuclease III [Campylobacter jejuni subsp. jejuni 1336]
Length = 208
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFEKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L RI + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|86133398|ref|ZP_01051980.1| HhH-GPD superfamily base excision DNA repair protein [Polaribacter
sp. MED152]
gi|85820261|gb|EAQ41408.1| HhH-GPD superfamily base excision DNA repair protein [Polaribacter
sp. MED152]
Length = 220
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 112/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + +P L + + +TL++AVLLSAQ TDV VNK T LFE AD
Sbjct: 1 MTKSEKVNFVIETLQNLYPEIPVPLDHKDPYTLLIAVLLSAQCTDVRVNKVTPFLFEKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++++ IR G+ KS+ I LS ILI +++ ++P++ EGL LP +G
Sbjct: 61 NPFDMVKMTQEQIKEIIRPCGLSPMKSKGIYGLSKILIEKYNGEVPKSFEGLEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R L+ GK N+ E+ R+ P + + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLSNGKNVNQTEKDAKRLFPKELWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRDYSPAR 191
>gi|332157727|ref|YP_004423006.1| endonuclease III [Pyrococcus sp. NA2]
gi|331033190|gb|AEC51002.1| endonuclease III [Pyrococcus sp. NA2]
Length = 220
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
L + E I + +P K + + ++ ++S ++ D ++ ++ LF+
Sbjct: 5 SNLSERERAERIIRILKSTYPRDKH--VSGDPYKTLIKCIISQRNRDEVTDRVSEELFKR 62
Query: 77 ADTPQKMLAIGEKKLQNYIR--TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + +++ ++R +G+++ K + I+ +S IL+ ++D K+P + L +LP
Sbjct: 63 YPTIRDIANASIDEMREFLRSLKVGLWKNKGKWIVEVSRILLEKYDGKVPDKFDELLKLP 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYN 193
GIGRK AN++L+ FGIP I VDTH++RIS R+GLA +P +VE+ L +IP +
Sbjct: 123 GIGRKCANIVLAYGFGIPAIPVDTHVYRISRRLGLAPWDASPEEVEERLKSLIPREEWIY 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ +V HG+ +C+ +P+C C + +LC RI
Sbjct: 183 VNHAMVDHGKRICRPVEPRCNECPLRDLCPRI 214
>gi|281491330|ref|YP_003353310.1| A/G-specific adenine DNA glycosylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375071|gb|ADA64589.1| A/G-specific adenine DNA glycosylase [Lactococcus lactis subsp.
lactis KF147]
Length = 385
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++E + K L + + + ++ ++S Q+ V + +
Sbjct: 3 WSKNQIKEFQQDLLSWYDDNKKPLPWRKTTEPYKIWISEIMSQQTQVETVMPYYERFMKK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +L +G Y ++ N+ + ++++++ K P L + L GI
Sbjct: 63 YPTIETLAQADDAELLKLWEGLGYYS-RARNLKIAAQEVVDKYNGKFPDNLADILPLKGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG+ +D ++ R+++R ++ + + L ++I K
Sbjct: 122 GPYTAAAIASISFGLAEPAIDGNLMRVTSRLFELDCDISKSSSRKIFDGYLRKLISKKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC + P+C++C + N C
Sbjct: 182 GDFNQALMDLGSLVCSPKSPKCEACPLLNYC 212
>gi|326803502|ref|YP_004321320.1| putative endonuclease III [Aerococcus urinae ACS-120-V-Col10a]
gi|326650656|gb|AEA00839.1| putative endonuclease III [Aerococcus urinae ACS-120-V-Col10a]
Length = 215
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L T E + + +P L + + + L++AV+LSAQSTD VN+ T LF+
Sbjct: 2 LLTDSETLSVLKEIMVLFPDAGPSLNFNSVYQLLIAVMLSAQSTDKKVNEVTPDLFKAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + ++ +I +G+Y K+ + ++ LI+++ ++P + L L G+GR
Sbjct: 62 TPKHLAKASPLDIEPFINKLGLYHSKARYLHAMGQQLIDKYSGQVPSQRKDLESLNGVGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+LS+ F P VDTHI RI+ T +VE+ + +++P +AH+
Sbjct: 122 KTASVVLSLGFDQPAFAVDTHISRIAKHHHFVDPNATVREVEKRITKVLPASEWKDAHHA 181
Query: 198 LVLHGRYVCKARKPQC 213
L+ GR +C AR PQC
Sbjct: 182 LIAFGRTICTARNPQC 197
>gi|116328130|ref|YP_797850.1| endonuclease III-like protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331417|ref|YP_801135.1| endonuclease III-like protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120874|gb|ABJ78917.1| Endonuclease III related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125106|gb|ABJ76377.1| Endonuclease III related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 232
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 6/223 (2%)
Query: 8 DSYQGNSPLGCLYTP-----KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S L P K IF L ++ + L++ +++ L +AV+LSAQ T
Sbjct: 3 RKNTQESQNRHLKKPDPAFLKWFSRIFSLLRKEFGDVQTPLHFKHNYELAIAVILSAQCT 62
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN+ T LF+ + + K ++ I + G Y K+++I + L+N+FD K
Sbjct: 63 DERVNQVTPSLFKTFPSLESFANADLKDIEALIFSTGFYHNKAKSIQGFAKKLLNDFDGK 122
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
IP+T+ LT LPG GRK ANV+LS G + I VDTH+ RIS +GL P +VE+
Sbjct: 123 IPRTIAELTTLPGFGRKTANVVLSEVHGLVEGIVVDTHVNRISKVLGLTTKNDPVQVEKD 182
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ I+P K+ + +L+ GR CKA + C CI+ C
Sbjct: 183 LMSILPKKYWRDISLYLIFLGRKSCKAHRRFCGECILKKDCPS 225
>gi|238018411|ref|ZP_04598837.1| hypothetical protein VEIDISOL_00237 [Veillonella dispar ATCC 17748]
gi|237864882|gb|EEP66172.1| hypothetical protein VEIDISOL_00237 [Veillonella dispar ATCC 17748]
Length = 365
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 87/215 (40%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K +L + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKSPKWVPQLLAWYDVNKRDLPWRDCGDPYKVWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ + + +G Y ++ N+ ++ + +P + + L G+
Sbjct: 61 FPTLEDLAKASEDEVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPHDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P + VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEVAVDGNVLRIYARLYRIFDDILSMKGKKAITAIVEETLPHDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C+ +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCEAYQ 214
>gi|21226997|ref|NP_632919.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905314|gb|AAM30591.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 234
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 4/227 (1%)
Query: 2 VSSKKSDSYQGNSPL---GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLS 58
+ KK L + I+ L ++ K L Y N L+VA +LS
Sbjct: 1 MPEKKPRKSTSKEVLIEYDIPDNRHNFDRIWDLLKEEYTDAKPSLNYSNPLELLVATVLS 60
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
AQSTDV +NK T++LF+ T + ++L+ I + G Y+ K++NI + + ++I
Sbjct: 61 AQSTDVQINKVTENLFKKYRTAWDYASADIRELEADIYSTGFYKSKAKNIKAAAQLIIEN 120
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNK 177
+ ++PQT+E L LPG+GRK AN++L+ AFGI I VDTH+ R+S R+GL P K
Sbjct: 121 YGGEVPQTMEELVTLPGVGRKTANIVLARAFGIIEGIAVDTHVKRVSGRLGLTRNSDPVK 180
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+EQ L+ + + + L+ HGR VC+ARKP+C C++ LC
Sbjct: 181 IEQDLISLARKEDLDSISMTLIYHGRKVCQARKPRCSICVVKELCPS 227
>gi|237756607|ref|ZP_04585124.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691238|gb|EEP60329.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 215
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ I S W +P + F ++++ +LS ++ D +A+ LF+
Sbjct: 3 LKTFEKAFRILKKESKNWNAPVVAFMGRNGNDPFKILISTILSLRTKDQTTAQASDRLFK 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ADTP+K+L + EK+++ I +G YR K++ I +S IL+ +F++K+P LE L G
Sbjct: 63 VADTPEKILKLSEKEIEELIYPVGFYRNKAKIIKEISKILVEKFNSKVPDDLETLLSFKG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK AN++LS FG P I VD H+ RISNRIGL K P + E L+ I+P K+ + +
Sbjct: 123 VGRKTANLVLSEGFGKPAICVDVHVHRISNRIGLVKTKNPEETEFKLMEILPKKYWKDIN 182
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ V G+ +CK KP+C C I C+ K+
Sbjct: 183 FVFVAFGQTICKPVKPKCNQCPIIKYCEYDKK 214
>gi|167461879|ref|ZP_02326968.1| A/G-specific adenine glycosylase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 390
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 9/214 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+++ + E + K +L + N + + V+ ++ Q+ V E
Sbjct: 5 IFSEERKEYFSEHLLSWYEVHKRDLPWRRSKNPYYVWVSEVMLQQTRVDTVIPYFHRFIE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E+++ +G Y ++ N+ + + +P E ++ L G
Sbjct: 65 KFPTIQDLALAPEEEVLKMWEGLGYYS-RARNLQGAVREVHERYGGIVPDEKEEISSLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKH 190
+G + +LS+A+ P VD ++ R+ +R L T K+E +IP
Sbjct: 124 VGPYTSGAVLSIAYNKPEPAVDGNVMRVLSRFFLIGDDITRPATRVKMEYLAKALIPEGR 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + L+ G VC R PQC +C + C+
Sbjct: 184 AGDFNQALMELGALVCTPRSPQCLTCPVMEHCEA 217
>gi|154251157|ref|YP_001411981.1| A/G-specific adenine glycosylase [Parvibaculum lavamentivorans
DS-1]
gi|154155107|gb|ABS62324.1| A/G-specific adenine glycosylase [Parvibaculum lavamentivorans
DS-1]
Length = 615
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 88/220 (40%), Gaps = 16/220 (7%)
Query: 20 YTPKELEEIFYL-----FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVN 67
K+ +EI + L + + + + ++ ++ Q+T V
Sbjct: 234 MKAKKAKEISGKAAAAPLLAWYDKHARVLPWRARKGERADPYAVWLSEIMLQQTTVATVG 293
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ + + A ++++ +G Y ++ N+ + + + +E+ K P T+
Sbjct: 294 PYFTGFLKRWPNVEALAAAPQEEVMKAWAGLGYYS-RARNLHACAKEVSSEYGGKFPDTV 352
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLR 184
EGL LPGIG A I ++AFG VD ++ R+ R+ P + +
Sbjct: 353 EGLESLPGIGPYTAAAIAAIAFGRAATVVDGNVERVVARLFEIETPLPAAKPDIREKART 412
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ P + + ++ G +C R P C C I++LC
Sbjct: 413 LTPEQRAGDFAQAMMDLGATICTPRSPACNRCPINDLCDA 452
>gi|158312190|ref|YP_001504698.1| endonuclease III [Frankia sp. EAN1pec]
gi|158107595|gb|ABW09792.1| endonuclease III [Frankia sp. EAN1pec]
Length = 241
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 103/192 (53%)
Query: 34 LKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + L++ + L+VA +LSAQ TD VN+ T +F T A +L+
Sbjct: 28 ELHPDARIALHFSSPLELLVATVLSAQCTDKKVNEVTPGVFARYPTAAAYAAADRDELEA 87
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+R G +R K+ +++ + L+ FD ++P LE L LPG+GRK ANV+L FGIP
Sbjct: 88 ILRPTGFFRAKANSLMGIGAALVERFDGEVPGRLEALVTLPGVGRKTANVVLGHCFGIPG 147
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
I VDTH+ R+S R GL P + E L +I + A ++ HGR VC AR+P C
Sbjct: 148 ITVDTHVGRLSRRFGLTTETDPVRAESDLAALIERRDWTIASDRMIFHGRRVCHARRPAC 207
Query: 214 QSCIISNLCKRI 225
+C I+ +C
Sbjct: 208 GACAIARMCPSF 219
>gi|91216362|ref|ZP_01253329.1| endonuclease III/Nth [Psychroflexus torquis ATCC 700755]
gi|91185500|gb|EAS71876.1| endonuclease III/Nth [Psychroflexus torquis ATCC 700755]
Length = 222
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 112/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P L + + +TL++AVLLSAQSTDV VN+ T LFE AD
Sbjct: 1 MKKSEKVDFVINTLEEIYPEIPIPLDHKDPYTLLIAVLLSAQSTDVKVNQITPLLFERAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ I+ +G+ KS+ I LS I+I +++ K+PQ+ EGL LP +G
Sbjct: 61 NPWDMIKMSADQIREIIKPVGLSPMKSKGIYGLSQIIIEKYNGKVPQSFEGLEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+L+ AFG+ T VDTHI R+ R GL GK K E+ R+ P + + H +
Sbjct: 121 KTASVVLAQAFGVSTFPVDTHIHRLMYRWGLTTGKNVQKTEKDAKRLFPQEVWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRQYSPAR 191
>gi|296331948|ref|ZP_06874413.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673560|ref|YP_003865232.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151026|gb|EFG91910.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411804|gb|ADM36923.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 369
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K+++ + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LKQKDIQRFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ S + E+ +P + L G+
Sbjct: 68 FPTVEALADADEEKVLKAWEGLGYYS-RVRNLQSAVKEVKQEYGGIVPPDEKDFGSLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT E ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAVRAFISKEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C ++
Sbjct: 187 SEFNQGLMELGALICTPKSPSCLLCPVQKHCSAFEE 222
>gi|153952219|ref|YP_001398166.1| endonuclease III [Campylobacter jejuni subsp. doylei 269.97]
gi|152939665|gb|ABS44406.1| endonuclease III [Campylobacter jejuni subsp. doylei 269.97]
Length = 208
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKTYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L R + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRTF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|167750867|ref|ZP_02422994.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702]
gi|167656046|gb|EDS00176.1| hypothetical protein EUBSIR_01851 [Eubacterium siraeum DSM 15702]
Length = 212
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E + + +P K L Y L++A LSAQ TD VN T LFE
Sbjct: 1 MTKKERAELVIDGLAECYPDVKCALVYKKPHELLIATRLSAQCTDKRVNMVTPALFEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
A ++ YI + G+Y+ K+ +I+ + +L ++F +IP T+E L +LPG+GR
Sbjct: 61 DIDSFAAAEPDEVAEYIHSCGLYKTKAVDIVMMCRMLRDDFGGEIPDTIEQLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ +G P + DTH+ R+S R+GL G KVE+ L II P + +
Sbjct: 121 KTANLIVGDLYGKPALVCDTHVIRVSGRLGLTDGTKDALKVEKQLAAIIKPDDRLMMCHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
LV HGR VC A KP C C +S CK
Sbjct: 181 LVWHGRLVCSAAKPNCSECRLSGFCKFF 208
>gi|149923815|ref|ZP_01912206.1| endonuclease III, putative [Plesiocystis pacifica SIR-1]
gi|149815327|gb|EDM74871.1| endonuclease III, putative [Plesiocystis pacifica SIR-1]
Length = 270
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 2/202 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L E+ ++ P P+ EL + + + L++ +LSAQ+ D +N+ LFE TP +
Sbjct: 15 LSEVDERLAVAMPDPQCELDHDDAWQLLIVTILSAQARDAVINEIRPVLFERWPTPADLA 74
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ ++ ++ G YR K++ I + ++ D ++PQT + L LPG K AN++
Sbjct: 75 EASQEDVEVVVKRSGYYRNKAKAIRQCAAAIVERHDGEVPQTHDELVALPGASHKTANLV 134
Query: 145 LSMAFGIPT-IGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
L +AFGI + I VDTH+ R+S R+GL P GK P VE++L +I N + L+LHG
Sbjct: 135 LGVAFGIASGIVVDTHVNRVSARLGLVPAGKKPPVVEKALCKISSEDDWINLSHRLILHG 194
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
R++CK++ P C+ C ++ LC
Sbjct: 195 RHLCKSKAPDCRRCPVNELCPS 216
>gi|291531143|emb|CBK96728.1| endonuclease III [Eubacterium siraeum 70/3]
Length = 212
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E + + +P K L Y L++A LSAQ TD VN T LFE
Sbjct: 1 MTKKERAELVIDGLAECYPDVKCALVYKKPHELLIATRLSAQCTDKRVNMVTPALFEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
A ++ YI + G+Y+ K+ +I+ + +L ++F +IP T+E L +LPG+GR
Sbjct: 61 DIDSFAAAEPDEVAEYIHSCGLYKTKAVDIVMMCRMLRDDFGGEIPDTIEELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ +G P + DTH+ R+S R+GL G KVE+ L II P + +
Sbjct: 121 KTANLIVGDLYGKPALVCDTHVIRVSGRLGLTDGTKDALKVEKQLAAIIKPDDRLMMCHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
LV HGR VC A KP C C +S CK
Sbjct: 181 LVWHGRLVCSAAKPNCSECRLSGFCKFF 208
>gi|159903499|ref|YP_001550843.1| putative endonuclease [Prochlorococcus marinus str. MIT 9211]
gi|159888675|gb|ABX08889.1| putative endonuclease [Prochlorococcus marinus str. MIT 9211]
Length = 217
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 112/202 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + I +PSPK L ++N FT ++AV+LSAQSTD VN+ T+ LF IA
Sbjct: 1 MNKRQRADIIIKKLESLYPSPKIPLRHINSFTFLIAVMLSAQSTDKKVNEVTEDLFPIAY 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M ++G + +YI+ +G+ ++KS+ ++ LI +KIP +L L LPG+G
Sbjct: 61 TPQLMHSLGIDGIYSYIKQLGLAKQKSKYAYLIAEKLILSHSSKIPDSLNKLESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG+P+ VDTHI R++ R GL G + E L I P H +
Sbjct: 121 KTASVVISQVFGVPSFPVDTHIHRLAQRWGLTSGTSVKTTEADLKMIFPKSLWNKLHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ +GR C AR C +
Sbjct: 181 IYYGREYCTARGCNGMVCSLCK 202
>gi|27904617|ref|NP_777743.1| endonuclease III [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|32129508|sp|Q89AW4|END3_BUCBP RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|27904014|gb|AAO26848.1| endonuclease III [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 215
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 93/208 (44%), Positives = 133/208 (63%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K +I +FS + + K L + ++F L+++V+LSAQ+TD VNK T+ LF IA+T
Sbjct: 6 LNHKNRYKILKMFSNIYINFKTGLVFTSNFELLISVMLSAQTTDRMVNKTTQRLFGIANT 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++IG ++ IR +G+Y KKS NI+ IL+ + K+P E L LPG+GRK
Sbjct: 66 PSGFISIGLHAIRENIRKLGLYNKKSSNILRTCEILLKRYGGKVPNNREDLESLPGVGRK 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANVIL++ F TI VDTH+FR+ NRIG A G T VE+ LL I+P K + N H W +
Sbjct: 126 TANVILNVIFKKKTIAVDTHVFRLCNRIGFAKGTTVLTVEKKLLNIVPEKFKLNFHAWFI 185
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+HGRY+C +R P+C CIIS+LC+ +
Sbjct: 186 MHGRYICTSRVPKCSKCIISSLCEFKDK 213
>gi|304405278|ref|ZP_07386938.1| A/G-specific adenine glycosylase [Paenibacillus curdlanolyticus
YK9]
gi|304346157|gb|EFM11991.1| A/G-specific adenine glycosylase [Paenibacillus curdlanolyticus
YK9]
Length = 434
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 9/201 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K L + + + + V+ ++ Q+ V + T Q +
Sbjct: 25 RELLGWYDLVKRVLPWRQNRDPYRVWVSEIMLQQTRVDTVIPYYERFMARFPTVQSLAEA 84
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+ + + +G Y ++ N+ + + ++ ++ +P + L G+G A I+S
Sbjct: 85 PEEDVLKHWEGLGYYS-RARNLQAGAREVVAQYRGIVPDDATAVASLKGVGPYTAGAIMS 143
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+AF P VD ++ R+ +R +A T ++E+ IIP + + L+
Sbjct: 144 IAFNRPEPAVDGNVMRVLSRFWELEDDIAKPATRVRIEKLARSIIPEGRAGDFNQALMEL 203
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC + P C +C + C
Sbjct: 204 GALVCTPKSPGCLTCPVMQHC 224
>gi|57238209|ref|YP_178710.1| endonuclease III [Campylobacter jejuni RM1221]
gi|86149871|ref|ZP_01068100.1| endonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86151769|ref|ZP_01069983.1| endonuclease III [Campylobacter jejuni subsp. jejuni 260.94]
gi|88596925|ref|ZP_01100161.1| endonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|148925954|ref|ZP_01809641.1| endonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
gi|205355445|ref|ZP_03222216.1| endonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
gi|218562246|ref|YP_002344025.1| endonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|315124113|ref|YP_004066117.1| endonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|57167013|gb|AAW35792.1| endonuclease III [Campylobacter jejuni RM1221]
gi|85839689|gb|EAQ56949.1| endonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85841398|gb|EAQ58646.1| endonuclease III [Campylobacter jejuni subsp. jejuni 260.94]
gi|88190614|gb|EAQ94587.1| endonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359952|emb|CAL34741.1| endonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|145844940|gb|EDK22044.1| endonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
gi|205346679|gb|EDZ33311.1| endonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
gi|315017835|gb|ADT65928.1| endonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|315058009|gb|ADT72338.1| Endonuclease III [Campylobacter jejuni subsp. jejuni S3]
gi|315927332|gb|EFV06676.1| endonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 208
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L R + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRTF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|73668114|ref|YP_304129.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395276|gb|AAZ69549.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 134/222 (60%), Gaps = 1/222 (0%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
SKKSD+ S + I+ L ++P K L Y N L+VA +LSAQSTD
Sbjct: 6 SKKSDNQGFVSEYDLPDNRHNFDRIWALLKEEYPDVKPSLNYSNPLELLVATVLSAQSTD 65
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V +N+ T+ LF+ T + + ++L+N + + G Y+ K++NI + + +++ +++ ++
Sbjct: 66 VQINRVTEKLFKKYRTAEDYASADLRELENDLYSTGFYKSKAKNIKTAAQMIVEKYNGEV 125
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSL 182
P+T+E LT LPG+GRK AN++L+ AFG+ VDTH+ R+S R+GL P K+EQ +
Sbjct: 126 PKTMEELTSLPGVGRKTANIVLARAFGVVEGVAVDTHVKRVSRRLGLTKNSDPAKIEQDI 185
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + + + L+ HGR VC+A+KP+C+ CI+ +LC
Sbjct: 186 VSLARREDLDSISMTLIYHGRKVCQAKKPKCKICIVKDLCPS 227
>gi|312112272|ref|YP_003990588.1| A/G-specific adenine glycosylase [Geobacillus sp. Y4.1MC1]
gi|311217373|gb|ADP75977.1| A/G-specific adenine glycosylase [Geobacillus sp. Y4.1MC1]
Length = 364
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V E T +
Sbjct: 12 VEQFQSDLIGWFEKEQRDLPWRKDNDPYKVWVSEIMLQQTKVDTVIPYFNKFIEQFPTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+++ +G Y + N+ + + ++ KIP E ++L G+G
Sbjct: 72 ALAEADEEEVMKAWEGLGYYS-RIRNLHAAVKEVKEQYGGKIPDNPEQFSKLKGVGPYTT 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+LS+A+GIP VD ++ R+ +RI L E + II ++ +
Sbjct: 131 GAVLSIAYGIPEPAVDGNVMRVLSRIFLVWDDISKTGTRKLFEAIVRNIISKENPSYFNQ 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C R P C C + C+ +
Sbjct: 191 ALMELGALICMPRNPACLLCPVQAHCRAFHE 221
>gi|157414877|ref|YP_001482133.1| endonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|157385841|gb|ABV52156.1| endonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|315931793|gb|EFV10748.1| endonuclease III [Campylobacter jejuni subsp. jejuni 327]
Length = 208
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP E L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLEEEKLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L I + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTGIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|299538661|ref|ZP_07051944.1| endonuclease III [Lysinibacillus fusiformis ZC1]
gi|298726248|gb|EFI66840.1| endonuclease III [Lysinibacillus fusiformis ZC1]
Length = 220
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 130/210 (61%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ +P EL + N F L +A LLSAQ TDV VNK TK LF+
Sbjct: 1 MLTKKQWGHCLEEMDRMFPDAHCELVHDNAFELTIATLLSAQCTDVLVNKVTKTLFQKYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA+ ++LQ IR+IG+YR K++NI +L L++E+ +IP T E L LPG+GR
Sbjct: 61 TPEDYLAVSLEELQQDIRSIGLYRNKAKNIQALCQRLLDEYGGEIPATREALVTLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF IP + VDTH+ R+S R+GL + +VE+++++ P + H+
Sbjct: 121 KTANVVLSVAFDIPALAVDTHVERVSKRLGLCRWKDSVLEVEETIMKKTPMEKWSKTHHQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY CKA+ P C++C + N C+ ++
Sbjct: 181 LIFFGRYHCKAQNPGCRTCPLLNDCREGQK 210
>gi|83816513|ref|YP_446225.1| A/G-specific adenine glycosylase [Salinibacter ruber DSM 13855]
gi|294508156|ref|YP_003572214.1| A/G-specific adenine DNA glycosylase [Salinibacter ruber M8]
gi|83757907|gb|ABC46020.1| A/G-specific adenine glycosylase [Salinibacter ruber DSM 13855]
gi|294344484|emb|CBH25262.1| A/G-specific adenine DNA glycosylase [Salinibacter ruber M8]
Length = 354
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 84/201 (41%), Gaps = 9/201 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + K + + + + + V+ ++ Q+ V E T + +
Sbjct: 1 MLDWYDTHKRSMPWRETDDPYRIWVSEIMLQQTRVDTVRDYYHRFLEAFPTVEALADADR 60
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ ++ + + +++E D +P T++ + L G+G A +LS+A
Sbjct: 61 DTVLKHWEGLGFYA-RARHLHTAAQHVVDEHDGTVPSTMDAIKDLKGVGPYTAAAVLSIA 119
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR-----IIPPKHQYNAHYWLVLHGR 203
+ P +D ++ R+ +R+ + LR ++ P + + ++ G
Sbjct: 120 YRKPHAVLDGNVTRVLSRVFAVDEDATTSAAEGHLRDLANELLDPDRPGDFNQAMMELGA 179
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VC R P C C ++ +C+
Sbjct: 180 LVCTPRTPHCDRCPLNAVCRA 200
>gi|224436498|ref|ZP_03657512.1| endonuclease III [Helicobacter cinaedi CCUG 18818]
gi|313143007|ref|ZP_07805200.1| endonuclease III [Helicobacter cinaedi CCUG 18818]
gi|313128038|gb|EFR45655.1| endonuclease III [Helicobacter cinaedi CCUG 18818]
Length = 223
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 1/215 (0%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
P K + I LF + + K EL Y N + L+V V+LSAQ TD VN
Sbjct: 2 PKPNPKPSFKKAKKKNIPIIKALFLEHYKNAKTELVYHNLYELLVCVMLSAQCTDKRVNL 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
T LF + + ++ +I+++ + K+++++S+++ +++EF+ +IP T E
Sbjct: 62 VTPALFRAYPNVKALSQASLADVKEFIQSVSFFNNKAKHLVSMANQVMSEFNGEIPTTQE 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L L G+G+K ANV+L F + VDTH+FR+S+R+GL+ ++ + E+ L ++
Sbjct: 122 ELKTLTGVGQKTANVVLIEFFEQNYMAVDTHVFRVSHRLGLSGARSAIETEKELTALL-K 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
H VL GRY CKA KP C+ C ++ C+
Sbjct: 181 TDLSVLHQAFVLFGRYTCKALKPLCEECFVNAYCQ 215
>gi|254173706|ref|ZP_04880378.1| endonuclease III [Thermococcus sp. AM4]
gi|214032398|gb|EEB73228.1| endonuclease III [Thermococcus sp. AM4]
Length = 239
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
K E+I + P K L + + +V ++S + D + + LFE
Sbjct: 15 KRKRAEKIVEILMKTHPREK--LLIGDPYRTLVHCIISQRMRDEVTYRVWEELFEKYRDI 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSE--NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++ ++R G+ K++ I+ S I++ +++ K+P + L +LPGIGR
Sbjct: 73 ETIANTPVDEMREFLRKRGVGLWKTKGEWIVKASRIILEKYNGKVPDDINELMKLPGIGR 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG I VDTH+ RIS R+GLAP + P KVE+ L +IP + ++
Sbjct: 133 KCANIVLAYGFGKQAIPVDTHVNRISKRLGLAPPRVPPEKVEEYLRELIPKEKWIYVNHA 192
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+V HGR +CK +P+C+SC + LC K
Sbjct: 193 MVDHGRSICKPIRPKCESCPLKELCPYAK 221
>gi|195953854|ref|YP_002122144.1| endonuclease III [Hydrogenobaculum sp. Y04AAS1]
gi|195933466|gb|ACG58166.1| endonuclease III [Hydrogenobaculum sp. Y04AAS1]
Length = 211
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 117/209 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E++ S + +PK +L + + F L++ +L+AQ D VN K F
Sbjct: 1 MDEKTLAKEVYQRLSKIYKNPKIDLEFDSPFELLIETVLAAQEKDEKVNSIRKSFFSKFK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ M ++++ I++I Y KK+ I ++ IL++++++K+P + L +LPG+G+
Sbjct: 61 DPKAMKEAPLEEIKEAIKSISFYNKKAIAIKEIATILVDKYNSKVPDEEDELVKLPGVGK 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++L+ AF P I VD H+ RI R+GL K P+K + L I+ + + L
Sbjct: 121 KTANMVLANAFKKPAIAVDRHVHRIVQRLGLDKNKDPDKTTEHLKSIVDKELWTTFYLLL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H + VC A+ P+CQ C++ ++C+ +
Sbjct: 181 LRHAKEVCTAKNPKCQECVLKDICESFGK 209
>gi|187735056|ref|YP_001877168.1| endonuclease III [Akkermansia muciniphila ATCC BAA-835]
gi|187425108|gb|ACD04387.1| endonuclease III [Akkermansia muciniphila ATCC BAA-835]
Length = 212
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K + + +P L + + +TL+VAVLLSAQ TD VN T LF +A
Sbjct: 1 MNTEKRASIVQEELMSLYGAPPIPLVHRDAYTLLVAVLLSAQCTDKRVNLVTPALFALAS 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M + ++ +R G+ +K+ I++LS IL+ +++ K+P L LPG+G
Sbjct: 61 TPEEMARQDVEAVREIVRPCGLSERKASAIVNLSRILVEKYEGKVPCDFAALESLPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++ AFG+P VDTHIFR+S GL+ GKT VE+ L + P K + H +
Sbjct: 121 KTASVVMVQAFGVPAFPVDTHIFRLSRLWGLSTGKTVEAVERDLKSLFPEKLWGDLHLRI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
VL+GR C AR C I +
Sbjct: 181 VLYGREYCPARGC-GGRCPICS 201
>gi|294792602|ref|ZP_06757749.1| A/G-specific adenine glycosylase [Veillonella sp. 6_1_27]
gi|294456501|gb|EFG24864.1| A/G-specific adenine glycosylase [Veillonella sp. 6_1_27]
Length = 365
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K EL + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKNPKWVPQLLAWYDVHKRELPWRDCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ + + +G Y ++ N+ ++ + +P + + L G+
Sbjct: 61 FPTLEDLSKASEDEVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPHDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEAAVDGNVLRIYARLYRIFDDILSTKGKKAITAIVEETLPHDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCAAYQ 214
>gi|325287631|ref|YP_004263421.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulophaga lytica DSM
7489]
gi|324323085|gb|ADY30550.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulophaga lytica DSM
7489]
Length = 220
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 106/191 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ +P+ L + + +TL++AVL+SAQSTDV VNK T LF AD
Sbjct: 1 MTKAEKVTFTINKLKELYPTIPVPLDHKDPYTLLIAVLMSAQSTDVRVNKITPLLFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ I+ +G+ K++ I LS +LI+E + +P+ +E L + P +G
Sbjct: 61 NPYDMVKLTVDEIREIIKPVGLSPMKAKGIHGLSQMLIDEHNGVVPKDMEALEKFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A V++S AFGIP VDTHI R+ R G GK + E+ R+ P + + H +
Sbjct: 121 KTAGVVVSQAFGIPAFPVDTHIHRLMYRWGFTNGKNVTQTEKDAKRLFPKELWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRDYSPAR 191
>gi|291483307|dbj|BAI84382.1| hypothetical protein BSNT_01434 [Bacillus subtilis subsp. natto
BEST195]
Length = 369
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++++ + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LKQKDIQQFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ S + E+ +P + L G+
Sbjct: 68 FPTVEALADADEEKVLKAWEGLGYYS-RVRNLQSAVKEVKQEYGGIVPPDEKDFGGLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT E ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAIRAFISKEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C ++
Sbjct: 187 SEFNQGLMELGALICTPKSPSCLLCPVQQHCSAFEE 222
>gi|16077929|ref|NP_388743.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308699|ref|ZP_03590546.1| hypothetical protein Bsubs1_04783 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313022|ref|ZP_03594827.1| hypothetical protein BsubsN3_04729 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317948|ref|ZP_03599242.1| hypothetical protein BsubsJ_04673 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322222|ref|ZP_03603516.1| hypothetical protein BsubsS_04774 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314584|ref|YP_004206871.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis BSn5]
gi|81637527|sp|O31584|YFHQ_BACSU RecName: Full=Probable A/G-specific adenine glycosylase YfhQ
gi|2633186|emb|CAB12691.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis subsp. subtilis str. 168]
gi|2804547|dbj|BAA24483.1| YfhQ [Bacillus subtilis]
gi|320020858|gb|ADV95844.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Bacillus subtilis BSn5]
Length = 369
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++++ + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LKQKDIQQFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ S + E+ +P + L G+
Sbjct: 68 FPTVEALADADEEKVLKAWEGLGYYS-RVRNLQSAVKEVKQEYGGIVPPDEKDFGGLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT E ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAIRAFISKEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C ++
Sbjct: 187 SEFNQGLMELGALICTPKSPSCLLCPVQQHCSAFEE 222
>gi|108562989|ref|YP_627305.1| endonuclease III [Helicobacter pylori HPAG1]
gi|107836762|gb|ABF84631.1| endonuclease III [Helicobacter pylori HPAG1]
Length = 187
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Query: 43 LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYR 102
+++ N + L+VA +LSAQ TD VN+ T LFE + + ++++ I+++
Sbjct: 1 MHHKNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALASLEEVKEIIKSVSYSN 60
Query: 103 KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
KS+++I+++ ++ +F IP T + L L G+G+K ANV+LS+ F + VDTH+FR
Sbjct: 61 NKSKHLINMAQKVVRDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYMAVDTHVFR 120
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++R+GL+ TP K E+ L + + H+ L+L GRY CKA+ P C +C + C
Sbjct: 121 TTHRLGLSSANTPTKTEEELSDLF-KDNLSKLHHALILFGRYTCKAKNPLCDACFLKEFC 179
>gi|148642332|ref|YP_001272845.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
gi|148551349|gb|ABQ86477.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
Length = 210
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+++ +I + + E + + ++V +LS ++ D N ++ATK+LF +
Sbjct: 10 EKVIKIVDELNKLYK--IREFVNKDPYKVLVRTILSQRTRDENTDQATKNLFGKYKNIYE 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
++ ++ IR G YR K+ I +S ILI+++ ++P L+ L LPG+GRK AN
Sbjct: 68 IVDAPTDDVEELIRCSGFYRVKAARIKEVSRILIDQYGGEVPDNLKELVELPGVGRKTAN 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L AF +P I VDTH+ RISNRIGL KTP + E L +I P + + +V G
Sbjct: 128 CVLVYAFELPAIPVDTHVHRISNRIGLVNTKTPEQTEVELAKIAPKELWIKLNDLMVQFG 187
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
+ +CK PQC+ C IS++C
Sbjct: 188 QTICKPMSPQCEMCPISDICDY 209
>gi|260818109|ref|XP_002603927.1| hypothetical protein BRAFLDRAFT_248509 [Branchiostoma floridae]
gi|229289251|gb|EEN59938.1| hypothetical protein BRAFLDRAFT_248509 [Branchiostoma floridae]
Length = 425
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 79/220 (35%), Gaps = 15/220 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNKATKH 72
++ + + K +L + + + V+ ++ Q+ V
Sbjct: 7 DDIPTLRSSLLSWYDINKRDLPWRRQLKNTDMNQRAYAVWVSEMMLQQTQVATVIDYYDR 66
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
E T QK+ +++ +G Y + ++ L
Sbjct: 67 WLEKWPTVQKLATATLEEVNEMWSGLGYYSRGRRLHEGAQKVVKELDGQMPSSAASLLKE 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIP 187
LPG+GR A I S+A+ T VD ++ R+ +R+ + + + R++
Sbjct: 127 LPGVGRYTAGAIASIAYSQATGVVDGNVIRVLSRLRVIGAESTSPQVMEVMWSLADRLVD 186
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
PK + + ++ G VC + P C C I LC+ +Q
Sbjct: 187 PKKPGDFNQAMMELGATVCTPKNPSCGDCPIRGLCRAYQQ 226
>gi|239826021|ref|YP_002948645.1| A/G-specific adenine glycosylase [Geobacillus sp. WCH70]
gi|239806314|gb|ACS23379.1| A/G-specific adenine glycosylase [Geobacillus sp. WCH70]
Length = 366
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V E T +
Sbjct: 12 IEQFQLDLIGWFEKEQRDLPWRKDNDPYKVWVSEIMLQQTKVDTVIPYFNKFIEQFPTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+++ +G Y + N+ + + ++ KIP E ++L G+G
Sbjct: 72 ALAEADEEEVLKAWEGLGYYS-RIRNLHAAVKEVKEQYGGKIPDNREQFSKLKGVGPYTT 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+LS+A+GIP VD ++ R+ +RI L E + +II ++ +
Sbjct: 131 GAVLSIAYGIPEPAVDGNVMRVLSRIFLVWEDIAKTGTRKLFEAIVRQIISRENPSYFNQ 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C R P C C + C+ +++
Sbjct: 191 ALMELGALICTPRNPACLLCPVQAHCRALQE 221
>gi|260592530|ref|ZP_05857988.1| endonuclease III [Prevotella veroralis F0319]
gi|260535576|gb|EEX18193.1| endonuclease III [Prevotella veroralis F0319]
Length = 215
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTRKERYTYILDYFRKHVGHVTTELNFGSAFQLLCATLLSAQCTDKRINAITPELFRHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M + + Y++++ K+ +++ +S +L+ +F ++P T E LT+LPG+GR
Sbjct: 61 DAKTMAKASVEDVFEYVKSVSYPNSKATHLVEMSRMLVEKFKGEVPSTPEELTQLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANVI ++ FG PT+ VDTH++R+S+R+GL P TP KVE L+ IP + +AH+
Sbjct: 121 KTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMNNIPTEEVSDAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
W++LHGRYVCK+ K C+ C +C ++ +
Sbjct: 181 WILLHGRYVCKSAKADCEHCPFDTICPKLMK 211
>gi|323698152|ref|ZP_08110064.1| A/G-specific adenine glycosylase [Desulfovibrio sp. ND132]
gi|323458084|gb|EGB13949.1| A/G-specific adenine glycosylase [Desulfovibrio desulfuricans
ND132]
Length = 364
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + + V+ +++ Q+ V + K + + +
Sbjct: 8 RALLQWYDAEHRDLPWRRDPSPYRVWVSEIMAQQTQMDRVVEYYKRWMDRFPDIRSLADA 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ N +G Y ++ N+ + ++ + F+ + P + LPG+G A + S
Sbjct: 68 HEEEVLNLWEGLGYYS-RARNLHRAAVLIEDHFNGEFPADFSDIRSLPGVGDYTAGAVAS 126
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLH 201
+AFG I VD ++ R+ R+ ++ VE ++ R+IP + + L+
Sbjct: 127 IAFGEAEIAVDANVLRVFARLLDMDLPVRDRAGRNMVEDAVRRLIPEDRPGDFNQALMEF 186
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C+ + P+C++C + C+
Sbjct: 187 GALICR-KNPRCEACPVRAFCRA 208
>gi|327490153|gb|EGF21941.1| endonuclease III [Streptococcus sanguinis SK1058]
Length = 199
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EEI +P K L + NHF L+VAV+LSAQ+TD VNKAT LFE +PQ M
Sbjct: 2 IEEII----ALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPALFEAYPSPQDMA 57
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
GE + YI +G+YR K++ + + L+++FD ++PQT L L G+GRK ANV+
Sbjct: 58 KAGEADIAKYISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTRAELESLAGVGRKTANVV 117
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+S+ FGIP VDTH+ RI + TP +VE+ ++ ++PP+ AH ++ GR
Sbjct: 118 MSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPERWLPAHQAMIYFGR 177
Query: 204 YVCKARKPQCQ 214
+C + P+C
Sbjct: 178 AICHPKNPECD 188
>gi|319954947|ref|YP_004166214.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulophaga algicola
DSM 14237]
gi|319423607|gb|ADV50716.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulophaga algicola
DSM 14237]
Length = 220
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 106/191 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ +P+ L + + +TL++AVL+SAQ TDV VN+ T LF AD
Sbjct: 1 MTKSEKVAFTIQKLKELYPTIPVPLDHKDPYTLLIAVLMSAQCTDVRVNQITPLLFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ IR +G+ KS+ I LS +L++++D +PQ LE L P +G
Sbjct: 61 NPYDMIKLTIDEIRAIIRPVGLSPMKSKGIHGLSQMLVDKYDGIVPQELELLEEFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R G GK + E+ R+ P + + H +
Sbjct: 121 KTASVVVSQAFGIPAFPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRLFPKEIWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|65318912|ref|ZP_00391871.1| COG0177: Predicted EndoIII-related endonuclease [Bacillus anthracis
str. A2012]
Length = 202
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N F L++AV LSAQ D VNK TK+LF+ TP+ L++ ++L
Sbjct: 1 MADMYPEAHCELIHDNPFELVIAVALSAQCPDALVNKVTKNLFQKYKTPEDYLSVSLEEL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Q IR+IG+YR K++ I L +L+++++ ++P+ + LT+LPG+GRK ANV++S+AFGI
Sbjct: 61 QQDIRSIGLYRNKAKXIQKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R+S R+ + + +VE++L++ IP H+ ++ GRY CKA++
Sbjct: 121 PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHRMIFFGRYHCKAQR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC+ C + +C+ K+
Sbjct: 181 PQCEECPLLEVCREGKK 197
>gi|150025174|ref|YP_001296000.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacterium
psychrophilum JIP02/86]
gi|149771715|emb|CAL43189.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacterium
psychrophilum JIP02/86]
Length = 218
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 105/191 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P+ L + + +TL++AVLLSAQ TDV VN+ T LF AD
Sbjct: 1 MTKKESVTFVINTLKELYPTIPIPLDHKDPYTLLIAVLLSAQCTDVRVNQITPILFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ IR G+ KS+ I LS ++I D K+PQ+ E L +P +G
Sbjct: 61 NPFDMVKLSIEEIKEIIRPCGLSPMKSKGIFGLSQMIIELHDGKVPQSFEALEAMPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R L GK + E+ RI P + + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLTNGKNVAQTEKDAKRIFPKEIWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|330836808|ref|YP_004411449.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta coccoides
DSM 17374]
gi|329748711|gb|AEC02067.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta coccoides
DSM 17374]
Length = 224
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 104/207 (50%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+EI L P L + F ++ V+LSAQ+TD V K LFE
Sbjct: 8 KKDRAKEIARLLDASSPQKILFLDPSSPFRFLIQVILSAQTTDAQVLKIAPVLFETYPDV 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + K++ IR+ G + K+ +II + IL + IP T+E LT LPG+GRK
Sbjct: 68 RSLAGADINKVKEIIRSTGHFNTKARHIIDCATILQKTYGGWIPSTMEELTALPGVGRKT 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+ +L +G P I VDTH R+S R+ L P +EQ + ++PP QY L L
Sbjct: 128 ASCVLGEVYGQPVIIVDTHFGRVSQRLELVTSARPEIIEQQMKELLPPDMQYRFSMTLNL 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
GR C ARKPQC +C + LC ++
Sbjct: 188 FGRNCCTARKPQCHNCPLYALCPWPEK 214
>gi|14520880|ref|NP_126355.1| endonuclease III [Pyrococcus abyssi GE5]
gi|5458097|emb|CAB49586.1| nth endonuclease III [Pyrococcus abyssi GE5]
Length = 222
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
L + +I + +P + + + ++ ++S ++ D ++ ++ LF+
Sbjct: 5 SSLSERERALKIVQILKSTYPRERH--VSGDPYKTLIRCIISQRNRDEVTDRVSEELFKR 62
Query: 77 ADTPQKMLAIGEKKLQNYIR--TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + + + +++QN++R +G++R K + I+ S I++ ++ ++P E L +LP
Sbjct: 63 YPSIEAIASASVEEMQNFLRSLKVGLWRSKGKWIVETSRIILEKYKGRVPDKFEELIKLP 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYN 193
GIGRK AN++L+ FGIP I VDTH++RIS R+GLA +P +VE+ L +IP +
Sbjct: 123 GIGRKCANIVLAYGFGIPAIPVDTHVYRISRRLGLAPWDASPEEVEERLKELIPREEWIY 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ +V HG+ VC+ KP+C C + LC RI
Sbjct: 183 VNHAMVDHGKSVCRPIKPRCDECPLKELCPRI 214
>gi|15964681|ref|NP_385034.1| A/G-specific adenine glycosylase protein [Sinorhizobium meliloti
1021]
gi|307304259|ref|ZP_07584011.1| A/G-specific adenine glycosylase [Sinorhizobium meliloti BL225C]
gi|307320564|ref|ZP_07599979.1| A/G-specific adenine glycosylase [Sinorhizobium meliloti AK83]
gi|15073859|emb|CAC45500.1| Probable A/G-specific adenine glycosylase [Sinorhizobium meliloti
1021]
gi|306893840|gb|EFN24611.1| A/G-specific adenine glycosylase [Sinorhizobium meliloti AK83]
gi|306902727|gb|EFN33320.1| A/G-specific adenine glycosylase [Sinorhizobium meliloti BL225C]
Length = 366
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 81/212 (38%), Gaps = 16/212 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +L + + + + ++ ++ Q+T V + +
Sbjct: 12 ALLLEWYDRHHRDLPWRVPPAAARKGAVADPYRVWLSEVMLQQTTVQAVKAYFEKFLALW 71
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + + +G Y ++ N+ + + + + P + EGL LPGIG
Sbjct: 72 PTVGDLAAADTEDVMKAWAGLGYYA-RARNLKKCAEAVARDHGGRFPDSEEGLKALPGIG 130
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A I ++AF + +D ++ R+ +R+ P ++ + + P +
Sbjct: 131 DYTAAAIAAIAFNRASAVLDGNVERVISRLHAVETPLPAAKPEMRALVQALTPADRPGDF 190
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 191 AQAMMDLGATICTPKRPACSLCPFRTDCRALK 222
>gi|222444488|ref|ZP_03607003.1| hypothetical protein METSMIALI_00099 [Methanobrevibacter smithii
DSM 2375]
gi|261350964|ref|ZP_05976381.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
gi|222434053|gb|EEE41218.1| hypothetical protein METSMIALI_00099 [Methanobrevibacter smithii
DSM 2375]
gi|288860304|gb|EFC92602.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
Length = 208
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L +++ +I + + E + + ++V +LS ++ D N ++ATK+LF
Sbjct: 1 MLELTETEKVIKIVDELNKLYK--IREFVNKDPYKVLVRTILSQRTRDENTDQATKNLFG 58
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+++ ++ IR G YR K+ I +S ILI+++ ++P L+ L LPG
Sbjct: 59 KYKNIYEIVDAPTDDVEELIRCSGFYRVKAARIKEVSRILIDQYGGEVPDNLKELVELPG 118
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK AN +L AF +P I VDTH+ RISNRIGL KTP + E L +I P + +
Sbjct: 119 VGRKTANCVLVYAFELPAIPVDTHVHRISNRIGLVNTKTPEQTEVELAKIAPKELWIKLN 178
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+V G+ +CK PQC+ C IS++C
Sbjct: 179 DLMVQFGQTICKPMSPQCEMCPISDICDY 207
>gi|86142478|ref|ZP_01060988.1| endonuclease III [Leeuwenhoekiella blandensis MED217]
gi|85831230|gb|EAQ49687.1| endonuclease III [Leeuwenhoekiella blandensis MED217]
Length = 218
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + +P L + + +TL++AVL+SAQSTDV VN+ T LFE+AD
Sbjct: 1 MTKAEKVTFVIDTLKRLYPQIPIPLDHKDPYTLLIAVLMSAQSTDVKVNQITPLLFEVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ I+ +G+ K++ I LS ILI+++D ++P+++E L +LP +G
Sbjct: 61 NPYDMIKLSVEEIREIIKPVGLSPMKAKGIHGLSQILIDKYDGRVPESIEALEQLPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AF IP VDTHI R+ R L GK + E+ R+ P H +
Sbjct: 121 KTASVVVSQAFNIPAFPVDTHIRRLMYRWNLTNGKNVVQTEKDAKRLFPKDLWNELHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRQYSPAR 191
>gi|326335973|ref|ZP_08202150.1| endonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691937|gb|EGD33899.1| endonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 210
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 106/192 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ I +P+P L + + +TL++AV+LSAQ TD VN+ T LF AD
Sbjct: 1 MNKKEKIRFIMDTLEELYPNPPIPLNHKDPYTLLIAVILSAQCTDARVNQITPLLFAQAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++++ I+ +G+ KS I LSHILI ++ ++PQ+ + L LP +G
Sbjct: 61 NPYDMVKLTQEEIRQIIKPVGLSPMKSYGIYHLSHILIEKYQGQVPQSFQALEALPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R ++ G + + E+ + P H +
Sbjct: 121 KTASVVMSTAFGVPAFPVDTHIHRMLQRWEISDGSSVVQSEKDAKKAFPKHKWNKLHLQI 180
Query: 199 VLHGRYVCKARK 210
+ + R AR
Sbjct: 181 IYYAREYSPARN 192
>gi|188997187|ref|YP_001931438.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932254|gb|ACD66884.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 215
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ +I S W +P + F ++++ +LS ++ D +A+ LF+
Sbjct: 3 LKTFEKAFKILKKESKNWNAPVVAFMGRNGNDPFKILISTILSLRTKDQITAQASDRLFK 62
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ADTP+K+L + EK++ I +G YR K++ I +S IL+ +F++K+P LE L G
Sbjct: 63 VADTPEKILKLSEKEIVKLIYPVGFYRNKAKIIKEISKILVEKFNSKVPDDLETLLSFKG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+GRK AN++LS FG P I VD H+ RISNRIGL K P + E L++I+P K+ + +
Sbjct: 123 VGRKTANLVLSEGFGKPAICVDVHVHRISNRIGLVKTKNPEETEFKLMKILPKKYWKDIN 182
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ LV G+ +CK KP+C+ C I C+ K+
Sbjct: 183 FVLVAFGQTICKPVKPKCKECPIVKYCEHDKK 214
>gi|319790163|ref|YP_004151796.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
gi|317114665|gb|ADU97155.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
Length = 219
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 119/213 (55%), Gaps = 6/213 (2%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + + I + + + F ++VA +LS ++ D +A +
Sbjct: 1 MTEKERISRIVEILREAKKEWAVPVVTLMGQMGTDPFKILVATVLSLRTKDEVTAEAARR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF++ADTP+K+L + E+++ + I +G Y +K++N+ ++ IL+ + ++P LE L +
Sbjct: 61 LFQVADTPEKLLKLSEEEIASLIYPVGFYNRKAKNLKEIARILVEHYGGQVPSDLEELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK AN++++ F P I VDTH+ RI NR+G KTP + E +L +P +
Sbjct: 121 LPGVGRKTANLVVTQGFKKPGICVDTHVHRIMNRLGFVKTKTPEETEFALREKLPKEFWI 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+++C+ P+C C I +LCK++
Sbjct: 181 EINDLLVALGQHICRPISPKCSQCPIEHLCKKV 213
>gi|283954125|ref|ZP_06371650.1| endonuclease III [Campylobacter jejuni subsp. jejuni 414]
gi|283794404|gb|EFC33148.1| endonuclease III [Campylobacter jejuni subsp. jejuni 414]
Length = 208
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFNKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKA 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + F+ +IP + L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFNGEIPLDEQNLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L RI + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPESTEEDLTRIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|269798715|ref|YP_003312615.1| A/G-specific adenine glycosylase [Veillonella parvula DSM 2008]
gi|269095344|gb|ACZ25335.1| A/G-specific adenine glycosylase [Veillonella parvula DSM 2008]
Length = 365
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K EL + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKNPKWVPQLLAWYDVHKRELPWRDCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ + + +G Y ++ N+ ++ + +P + + L G+
Sbjct: 61 FPTLEDLAKASEDEVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPHDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEAAVDGNVLRIYARLYRIFDDILSTKGKKTITAIVEETLPHDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCAAYQ 214
>gi|308172762|ref|YP_003919467.1| A/G-specific adenine glycosylase [Bacillus amyloliquefaciens DSM 7]
gi|307605626|emb|CBI41997.1| A/G-specific adenine glycosylase [Bacillus amyloliquefaciens DSM 7]
gi|328552483|gb|AEB22975.1| A/G-specific adenine glycosylase [Bacillus amyloliquefaciens TA208]
gi|328910879|gb|AEB62475.1| A/G-specific adenine glycosylase [Bacillus amyloliquefaciens LL3]
Length = 365
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++++ + + L + + + + V+ ++ Q+ V + E
Sbjct: 8 MKQKDIDKFREDLITWFEREQRILPWRENQDPYRVWVSEVMLQQTRVETVIPYFRRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E+K+ +G Y + N+ S + + +P + L G+
Sbjct: 68 FPTVSALAEADEEKVLKAWEGLGYYS-RVRNLQSAVQEVHERYGGIVPAEEKEFGGLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT EQ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEQAVSAFISHEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C +
Sbjct: 187 SEFNQGLMELGAIICTPKSPSCLLCPVQKHCSAFAE 222
>gi|295402237|ref|ZP_06812194.1| A/G-specific adenine glycosylase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294975732|gb|EFG51353.1| A/G-specific adenine glycosylase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 364
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V E T +
Sbjct: 12 VEQFQSDLIGWFEKEQRDLPWRKDNDPYKVWVSEIMLQQTKVDTVIPYFNKFIEQFPTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+++ +G Y + N+ + + ++ KIP E ++L G+G
Sbjct: 72 ALAEADEEEVMKAWEGLGYYS-RIRNLHAAVKEVKEQYGGKIPDNPEQFSKLKGVGPYTT 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+LS+A+GIP VD ++ R+ +RI L E + II ++ +
Sbjct: 131 GAVLSIAYGIPEPAVDGNVMRVLSRIFLVWDDISKTGTRKLFEAIVRNIISKENPSYFNQ 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C R P C C + C+ +
Sbjct: 191 ALMELGALICVPRNPACLLCPVQAHCRAFHE 221
>gi|288961583|ref|YP_003451893.1| A/G-specific adenine glycosylase [Azospirillum sp. B510]
gi|288913863|dbj|BAI75349.1| A/G-specific adenine glycosylase [Azospirillum sp. B510]
Length = 352
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 11/205 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + +L + + + + ++ ++ Q+T V ++ E T +
Sbjct: 10 RRLLSWYDRHRRDLPWRAKPGETADPYRVWLSEIMLQQTTVPAVAPYFRNFTERWPTVRD 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G Y ++ N+ + + + P T L LPGIG A
Sbjct: 70 LADAPLDEVLVAWAGLGYYA-RARNLHKCARAVADGHGGNFPGTEAALLELPGIGAYTAA 128
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG VD ++ R+ RI PN + + + P + ++
Sbjct: 129 AITAIAFGRKATVVDGNVERVVARIFALEEPLPNAKPALRRLAATLTPDFRPGDYAQAMM 188
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
G VC RKP+C C + C+
Sbjct: 189 DLGATVCTPRKPKCMLCPWAEFCEA 213
>gi|269987023|gb|EEZ93298.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 216
Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
P L K+ + + K+ + L + L+VA +LSAQ+ D VN T L
Sbjct: 1 MPEFILLEQKKAKTAIEILENKYKNVSYYLNFNGPMQLLVAAILSAQTKDTVVNDLTPEL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F T + + L NY++ + K +NIIS I+ + KIP + L L
Sbjct: 61 FRKYKTVEDFANADPQDLLNYVKKVSFAENKVKNIISCCKIINENYKGKIPNDMNSLLSL 120
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+GRK AN IL AFGI I VDT + ++S RIGL+ K P+++E L I K+
Sbjct: 121 PGVGRKTANTILINAFGIVEGIPVDTWVIKLSYRIGLSKSKKPDEIENDLKEITDKKYWK 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
N Y + HG +C++ KP+C+ C I+N+C +
Sbjct: 181 NFAYVIKEHGHQICQSVKPKCEICPINNICPK 212
>gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
Length = 490
Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 19 LYTPK--ELEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ + ++E+ + P+ + + + + ++VA +LSA++ D A
Sbjct: 1 MSKAEIIDIEQAVDRLEQEVPNYRVPVVDLIAVQSQDPYKVLVATILSARTRDETTAGAA 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
LF A + + E++L IR +G +R K+ + L L +F KIP T+E L
Sbjct: 61 ARLFARAPDLDTLARLSEEELAKLIRPVGFFRAKAGYLARLPAALTAKFRGKIPATVEEL 120
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+GRK AN+++++AF P I VDTH+ RI N G TP E++L +P +
Sbjct: 121 VQLPGVGRKTANLVVAVAFERPAICVDTHVHRIMNIWGYVNTTTPEATEKALRAKLPQPY 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+ +C+ P C C ++ LC R+
Sbjct: 181 WRRINSLLVAFGQEICRPVGPHCDRCPLAQLCPRL 215
>gi|229543139|ref|ZP_04432199.1| A/G-specific adenine glycosylase [Bacillus coagulans 36D1]
gi|229327559|gb|EEN93234.1| A/G-specific adenine glycosylase [Bacillus coagulans 36D1]
Length = 372
Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++ + + +L + + + + V+ ++ Q+ V + E T
Sbjct: 10 DIKSFQDDLISWFEREQRKLPWREDRDPYKIWVSEIMLQQTRVDTVIPYFRRFMEKFPTI 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E ++ +G Y + N+ + + + +P T E +++L G+G
Sbjct: 70 EALADASEDEVLKAWEGLGYYS-RVRNLHAAVKEVEEHYGGTVPDTPEEVSKLKGVGPYT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
A ILS+A+G+P VD ++ R+ +A E+ + ++I ++ +
Sbjct: 129 AGAILSIAYGLPEPAVDGNVMRVLARILSIWEDIAKPSARKVFEEVVRKLISRENPSFFN 188
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC + P C C + C+ ++
Sbjct: 189 QALMELGALVCTPKSPSCLLCPVREHCRAFRE 220
>gi|317127690|ref|YP_004093972.1| A/G-specific adenine glycosylase [Bacillus cellulosilyticus DSM
2522]
gi|315472638|gb|ADU29241.1| A/G-specific adenine glycosylase [Bacillus cellulosilyticus DSM
2522]
Length = 363
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E+ + K +L + + + + V+ ++ Q+ V + + + +
Sbjct: 11 AEDFQANLLHWYEENKRDLPWRRERDPYKIWVSEIMLQQTKVDTVIPYYERFISLFPSAK 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+ + +G Y ++ N+ + + + +P ++RL G+G A
Sbjct: 71 ALAEAEEETVLKAWEGLGYYS-RARNLHAAVKEVNEVYGGMVPNNKAEISRLRGVGPYTA 129
Query: 142 NVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ IP VD ++ R+ ++ T K+E + +II +H +
Sbjct: 130 GAILSIAYNIPAPAVDGNVMRVVTRLLLMYDDISKVTTRKKIEAIIEQIISEQHPSEFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C R P C C + C+ ++
Sbjct: 190 ALMELGALICTPRNPACLICPVQLQCRAREE 220
>gi|255534203|ref|YP_003094574.1| Endonuclease III [Flavobacteriaceae bacterium 3519-10]
gi|255340399|gb|ACU06512.1| Endonuclease III [Flavobacteriaceae bacterium 3519-10]
Length = 208
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 102/191 (53%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + +P L + + FTL+VAV LSAQ+TD VN+ T LFE+A
Sbjct: 1 MTKKQRALTVMTELEKLYPEVPIPLDHSDPFTLLVAVGLSAQTTDKKVNQITPKLFEVAG 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P KM + +++ I+ IG+ K++N+ ++ IL+ + +PQT E L LPG+G
Sbjct: 61 DPYKMSILEVDEIRFLIKEIGLANTKAKNLKRMAEILVEKHQGVVPQTFEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ + L GK + E+ ++ P H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMKQWKLTDGKNVIETERDAKKLFPKTAWNRLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IFYGREYSPAR 191
>gi|86130303|ref|ZP_01048903.1| HhH-GPD superfamily base excision DNA repair protein [Dokdonia
donghaensis MED134]
gi|85818978|gb|EAQ40137.1| HhH-GPD superfamily base excision DNA repair protein [Dokdonia
donghaensis MED134]
Length = 224
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 110/191 (57%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ +P L + + +TL++AVL+SAQSTDV VN+ T LFE+AD
Sbjct: 1 MTKQEKVDFTIDTLQELYPQIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFEVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ I+ +G+ K++ I LS ILI++++ +P ++E LT P +G
Sbjct: 61 NPYDMVKLTVEEIREIIKPVGLSPMKAKGIHGLSQILIDKYNGVVPASIEKLTEFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFGIP VDTHI R+ R G GK + E+ R+ P + H +
Sbjct: 121 KTASVVVAQAFGIPAFPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRLFPEHLWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRDYSPAR 191
>gi|327405298|ref|YP_004346136.1| endonuclease III [Fluviicola taffensis DSM 16823]
gi|327320806|gb|AEA45298.1| endonuclease III [Fluviicola taffensis DSM 16823]
Length = 249
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 109/197 (55%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L + ++ + + +P L + + +TL++AVLLSAQ TDV VN+ T LF
Sbjct: 33 LLAMTKKEKAQYVIEELEKLYPETPVPLDHWDAYTLLIAVLLSAQCTDVRVNQITPILFR 92
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
A PQ M+ + +++++ I+ G+ +KS+ I LSH++I+ ++P + E L ++PG
Sbjct: 93 RASRPQDMIKLSVEEIRDIIKPCGLSPRKSQAIYDLSHMIIDLHGGEVPASFEDLEKMPG 152
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G K A+V++S AFG+P VDTHI R+ R GL GK E ++ P H
Sbjct: 153 VGHKTASVVMSQAFGVPAFPVDTHIHRLMTRWGLTSGKNVETTEADAKKLFPKDLWNKLH 212
Query: 196 YWLVLHGRYVCKARKPQ 212
++ +GR AR P+
Sbjct: 213 LQIIFYGRSHSPARSPK 229
>gi|319408231|emb|CBI81884.1| A/G-specific adenine glycosylase MutY [Bartonella schoenbuchensis
R1]
Length = 352
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 16/217 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ EI + L + + + + ++ ++ Q+T V K
Sbjct: 1 MHEISSRLLSWYDQNHRHLPWRITPKEQMEGIRPDPYKVWLSEIMLQQTTVETVKPYFKK 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
++ + + + +G Y ++ N+ + +H L+ + + PQ+++ L
Sbjct: 61 FLKLWPNLSSLSQASQDDIMKAWAGLGYYS-RARNLKNCAHQLVENYKGEFPQSVKTLRT 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPK 189
LPGIG A I ++AF P VD ++ RI R+ P ++++ +I
Sbjct: 120 LPGIGDYTAAAIAAIAFEHPVAVVDGNVERIITRLFAITSVLPKAKSEIKEKTQKITDLN 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + NLCK K
Sbjct: 180 RPGDFAQAMMDLGATICTPRKPSCLLCPLQNLCKAKK 216
>gi|327398938|ref|YP_004339807.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
gi|327181567|gb|AEA33748.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
Length = 217
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 5/210 (2%)
Query: 20 YTPKELEEIFYLFSLKW-----PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+++++ L + P + + ++++ +LS ++ D +A+ LF
Sbjct: 1 MKADQIDDVVKLLREAYRGFVEPVVTQVAKDKDPYKVLISTILSLRTKDETTLRASIRLF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+IAD K+ + E +++ I +G Y+ K++N+ ++ I+I + KIP L+ L +LP
Sbjct: 61 DIADNIYKLNELNEDEIERLIYPVGFYKTKAKNLKKIARIIIENYGGKIPDDLDELLKLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+GRK AN++L+ FG P I VD H+ RISNR+GL KTP + E +L +I+P K+
Sbjct: 121 NVGRKTANLVLAKGFGKPAICVDIHVHRISNRLGLVDTKTPEETEFALSKILPKKYWIEF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +C+ P C CIIS CKR
Sbjct: 181 NDLLVPFGQNICRPISPFCSKCIISKYCKR 210
>gi|288918355|ref|ZP_06412708.1| endonuclease III [Frankia sp. EUN1f]
gi|288350250|gb|EFC84474.1| endonuclease III [Frankia sp. EUN1f]
Length = 241
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 102/192 (53%)
Query: 34 LKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + L++ N L+VA +LSAQ TD VN+ T +F + A +L+
Sbjct: 28 ELHPDARIALHFGNPLELLVATVLSAQCTDKKVNEVTPAVFARYRSAAAYAAADRDELEG 87
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+R G +R K+ ++I + L F ++P LE L LPG+GRK ANV+L AFG+P
Sbjct: 88 LLRPTGFFRAKANSLIGIGAALNERFAGEVPGRLEDLVTLPGVGRKTANVVLGHAFGVPG 147
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
I VDTH+ R+S R L P +VE L +I + A ++ HGR +C AR+P C
Sbjct: 148 ITVDTHVGRLSRRFALTSETDPVRVETDLAALIERRDWTIASDRMIFHGRRICHARRPAC 207
Query: 214 QSCIISNLCKRI 225
+C I+ +C
Sbjct: 208 GACAIARMCPSF 219
>gi|229819906|ref|YP_002881432.1| DNA-(apurinic or apyrimidinic site) lyase [Beutenbergia cavernae
DSM 12333]
gi|229565819|gb|ACQ79670.1| DNA-(apurinic or apyrimidinic site) lyase [Beutenbergia cavernae
DSM 12333]
Length = 231
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++++ I + +P P L +VN +TL+VAV LSAQ+TD VN+ T LF +A
Sbjct: 2 PVRRVEKVQRIGDVLDELYPEPPIPLDHVNPYTLLVAVALSAQTTDKKVNEITPALFALA 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T +M +G +++ IR +G+ K+ N+ + + ++ +P+ L L G+G
Sbjct: 62 PTAAQMYELGPERILELIREVGLAPTKARNLWTAAGQIVEAGGELVPEWEF-LEGLAGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+++ AFG+P VDTHIFR++ R GL+ G T +VE L + P + H
Sbjct: 121 HKTASVVMAQAFGVPAFPVDTHIFRLARRWGLSRGTTVERVEADLKKAFPRETWVRRHLQ 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNL 221
++ GR C A++ +C I +
Sbjct: 181 IIYFGREYCPAQRHVFATCPICSF 204
>gi|297623616|ref|YP_003705050.1| A/G-specific adenine glycosylase [Truepera radiovictrix DSM 17093]
gi|297164796|gb|ADI14507.1| A/G-specific adenine glycosylase [Truepera radiovictrix DSM 17093]
Length = 326
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 6/200 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K L + + ++V+ ++ Q+ V + + Q + A
Sbjct: 13 LLAWFGGAKRALPWREVRTPYRVLVSEVMLQQTQVATVVPFFRRWMARFPSLQALAAAPL 72
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y + + + +P++ L +LPGIG A + S+A
Sbjct: 73 DDVLKAWEGLGYYSRARRL--QEAARAALDRHGGLPESYAALLKLPGIGPYTAAAVASLA 130
Query: 149 FGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
FG + VD ++ R++ R L T V L +P + + L+ G VC
Sbjct: 131 FGERALAVDGNVKRVAARLFCLPGEVTREAVRARLEPHLPDDAPGDFNEALMELGALVCT 190
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
AR PQC C + C +Q
Sbjct: 191 ARAPQCPRCPVQAHCGAYQQ 210
>gi|282849720|ref|ZP_06259104.1| A/G-specific adenine glycosylase [Veillonella parvula ATCC 17745]
gi|282580657|gb|EFB86056.1| A/G-specific adenine glycosylase [Veillonella parvula ATCC 17745]
Length = 365
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 87/215 (40%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T K+ + + K EL + + + + V+ ++S Q+ + + +
Sbjct: 1 MTDKKNPKWVPQLLAWYDVHKRELPWRGCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E K+ + + +G Y ++ N+ ++ + +P + + L G+
Sbjct: 61 FPTLEDLAKASEDKVVHAWQGLGYYS-RARNLRLGVKDVVENYGGIVPHDRKTMESLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A +LSMA+ P + VD ++ RI R+ + + +P
Sbjct: 120 GSYTAGAVLSMAYNEPEVAVDGNVLRIYARLYRIFDDILSTKGKKAITAIVEETLPHVRP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C+ +
Sbjct: 180 GDFNQALMDFGSAVCIPKTPRCGECPIVNMCEAYQ 214
>gi|307747514|gb|ADN90784.1| endonuclease III [Campylobacter jejuni subsp. jejuni M1]
Length = 208
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K EI LF + P EL + N + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLEIKELFLKHFNKPVTELKFSNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPDIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+ YI+T + K++N+I ++ + FD +IP E L L G+G+K A+
Sbjct: 62 LANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLEEEKLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L I + H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTGIF-KDNLNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY CKA+KP C+ C +++LCK +
Sbjct: 181 RYTCKAKKPLCKECFLNHLCKSKDK 205
>gi|229822772|ref|ZP_04448842.1| hypothetical protein GCWU000282_00061 [Catonella morbi ATCC 51271]
gi|229787585|gb|EEP23699.1| hypothetical protein GCWU000282_00061 [Catonella morbi ATCC 51271]
Length = 210
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I +P EL + N F L++AV+LSAQ+TDV+VNK T LFE TP+
Sbjct: 10 DKARVIVKRIQALYPDAHCELIHDNVFQLLIAVMLSAQATDVSVNKVTPALFERFPTPEA 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
L K+++ YI+TIG+YR K++ I L+ + ++P+T + L L G+GRK AN
Sbjct: 70 FLQASPKEIEPYIQTIGLYRNKAKFIYQCCEQLMQRYGGEVPRTRKELMDLAGVGRKTAN 129
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+L++ FGIP + VDTH+ R++ R+G P TP +VE++L+ IIP + AH+ ++
Sbjct: 130 VVLAVGFGIPALAVDTHVDRVAKRLGFVPANATPLEVEEALMEIIPKEDWAQAHHAILFF 189
Query: 202 GRYVCKARKPQ 212
GRY A+ P+
Sbjct: 190 GRYYSTAKNPK 200
>gi|297585019|ref|YP_003700799.1| A/G-specific adenine glycosylase [Bacillus selenitireducens MLS10]
gi|297143476|gb|ADI00234.1| A/G-specific adenine glycosylase [Bacillus selenitireducens MLS10]
Length = 362
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + + + +L + + + + V+ ++ Q+ V +
Sbjct: 1 MKQIQTTAFQHDLLTWYQADNRDLPWRKDQDPYKIWVSEIMLQQTRVETVIPYFNRFISL 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
TP+ + E+ + +G Y ++ N+ + + ++ K+P T + + L GI
Sbjct: 61 FPTPEALAEAAEEDVLKVWEGLGYYS-RARNLQAAVKEVTADYGGKVPDTEKEIRSLRGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A ILS+A+G P VD ++ R+ + +A K ++E L +IP +
Sbjct: 120 GPYTAGAILSIAYGKPVPAVDGNVMRVMSRLLTLYDDIAKPKARIQIENILRDLIPTEDA 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC + PQC +C + + C
Sbjct: 180 GDFNQALMELGATVCTPKNPQCLTCPVVSHC 210
>gi|225011006|ref|ZP_03701471.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacteria bacterium
MS024-3C]
gi|225004811|gb|EEG42768.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacteria bacterium
MS024-3C]
Length = 218
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 105/191 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ +P L + + +TL+VAVLLSAQSTDV VNK T LF+ AD
Sbjct: 1 MTKVEKVNFTIKTLGDLYPEIPIPLDHKDPYTLLVAVLLSAQSTDVRVNKITPLLFKKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + K++Q+ IR +G+ K++ I LS IL+ + +PQ LE L P +G
Sbjct: 61 NPFDMVKLTIKEIQDIIRPVGLSPMKAKGIHGLSEILVKTHNGVVPQDLETLETFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFGIP VDTHI R+ R G GK + E+ R+ P + H +
Sbjct: 121 KTASVVVAQAFGIPAFPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRLFPKALWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|52079318|ref|YP_078109.1| putative A/G-specific adenine glycosylase YfhQ [Bacillus
licheniformis ATCC 14580]
gi|52784683|ref|YP_090512.1| YfhQ [Bacillus licheniformis ATCC 14580]
gi|319646897|ref|ZP_08001125.1| YfhQ protein [Bacillus sp. BT1B_CT2]
gi|52002529|gb|AAU22471.1| putative A/G-specific adenine glycosylase YfhQ [Bacillus
licheniformis ATCC 14580]
gi|52347185|gb|AAU39819.1| YfhQ [Bacillus licheniformis ATCC 14580]
gi|317390956|gb|EFV71755.1| YfhQ protein [Bacillus sp. BT1B_CT2]
Length = 361
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K +++ + K +L + + + + V+ ++ Q+ V + E
Sbjct: 8 LEQKNIKQFQEDLISWYEQEKRDLPWRSDSDPYKVWVSEVMLQQTRVDTVIPYFNNFIEK 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ S + + +P + E L G+
Sbjct: 68 FPTVEALAEADEEKVLKAWEGLGYYS-RVRNLQSAVREVHERYGGVVPPSKEEFGSLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT E+ + I +
Sbjct: 127 GPYTRGAVLSIAYNQPVPAVDGNVMRVMSRILSVWDDIAKPKTKTLFEKIVEAFISEEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C +
Sbjct: 187 SEFNQGLMELGAVICTPKSPSCLLCPVREHCSAFAE 222
>gi|210618014|ref|ZP_03291849.1| hypothetical protein CLONEX_04082 [Clostridium nexile DSM 1787]
gi|210149007|gb|EEA80016.1| hypothetical protein CLONEX_04082 [Clostridium nexile DSM 1787]
Length = 586
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 10/223 (4%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKAT 70
+ L + L++I + K EL + + + + V+ ++ Q+ V
Sbjct: 220 KEVPVLLEDENLKKIADPLVEWYRENKRELPWREQISAYRVWVSEIMLQQTRVEAVKPFY 279
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
T + + E +L +G Y + N+ + ++ +F + P+T E +
Sbjct: 280 ARFLNALPTVKDLAEAEEDQLLKLWEGLGYYN-RVRNMQKAAKQIMEDFHGEFPKTYEEI 338
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRI 185
L GIG A I S AFGIP VD ++ R+ +RI + +E+ L RI
Sbjct: 339 KSLTGIGNYTAGAISSFAFGIPKPAVDGNVLRVVSRITASYDDIMKASVRTRIEEQLERI 398
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
IP + + L+ G VC P+C C + LC+ ++
Sbjct: 399 IPKNAASDFNQGLIELGAIVCVPNGEPKCLLCPLRQLCEAREK 441
>gi|168702310|ref|ZP_02734587.1| A/G-specific adenine glycosylase [Gemmata obscuriglobus UQM 2246]
Length = 375
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKH 72
++P+ L + + + +L + + + + V+ ++ Q+T V +
Sbjct: 7 WSPRTLAGVRTKLLNWFDKHQRDLPWRRTVNGARDAYQVWVSEVMLQQTTVAAVVPYFER 66
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + A E+++ +G YR ++ ++ + + +L+ + +P +
Sbjct: 67 FLAAFPDVRALAAADEQRVLKLWEGLGYYR-RARHLHAAAKLLVEAHNGDLPDDPDVWEP 125
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIP 187
LPG+GR +LS AF P V+ + R+ R+ PG V + ++P
Sbjct: 126 LPGVGRYILGAVLSQAFDRPLPIVEANSLRVLARLFAYPGDPREGEGKVWVWAAAETVLP 185
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K + + L+ G VC P C C + + C+ +
Sbjct: 186 AKRAGDFNQSLMELGALVCTPTAPACDRCPVRDNCEAKR 224
>gi|303235525|ref|ZP_07322134.1| endonuclease III [Prevotella disiens FB035-09AN]
gi|302484262|gb|EFL47248.1| endonuclease III [Prevotella disiens FB035-09AN]
Length = 218
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTKKERYTFILDYFRTNVGEVSTELMFGSAFQLLCATLLSAQCTDKRINAITPALFAKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M + ++++ K+ +++ ++ +L+N + +IP L +LPG+GR
Sbjct: 61 DAKTMAKADVDDVFELVKSVSYPNSKANHLVEMARMLVNNYGGEIPSDPNELVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG PT+ VDTH++R+S+R+GL P TP KVE L++ IP +AH+
Sbjct: 121 KTANVLQAVWFGKPTLAVDTHVYRVSHRLGLVPNEANTPRKVEDYLMKNIPLNEVSSAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
W++LHGRY+CK+ +P C+ C C +
Sbjct: 181 WILLHGRYICKSMRPLCEKCPFDTFCPK 208
>gi|218441431|ref|YP_002379760.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7424]
gi|218174159|gb|ACK72892.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7424]
Length = 363
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E+ +I L L + +L + + + + V+ ++ Q+ V + + T
Sbjct: 9 EVVKIRQLLLLWYKEKGRDLPWRHQKDPYCIWVSEIMLQQTQVKTVIPFYQRWLQRFPTI 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + +++ +G Y ++ N+ + LI ++ P LE + LPGIGR
Sbjct: 69 KDLALADLQEVLKAWEGLGYYA-RARNLHKAAQYLIQNYNGIFPDRLEEVLSLPGIGRTT 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYW 197
A ILS AF P +D ++ R+ +R ++ + +I ++ + +
Sbjct: 128 AGGILSAAFNQPISILDGNVKRVLSRFIALSVPPSKALPQLWELSDSLIDLENPRDFNQG 187
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC + P+C C C+ +
Sbjct: 188 LMDLGATVCTRKNPKCDQCPWQGDCQAYNK 217
>gi|291557374|emb|CBL34491.1| endonuclease III [Eubacterium siraeum V10Sc8a]
Length = 212
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P K L Y L++A LSAQ TD VN T LFE
Sbjct: 1 MTKKERAGLVIDGLAECYPDVKCALVYKKPHELLIATRLSAQCTDKRVNMVTPALFEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
A ++ YI + G+Y+ K+ +I+ + +L ++F +IP T+E L +LPG+GR
Sbjct: 61 DIDSFAAAEPDEVAEYIHSCGLYKTKAVDIVMMCRMLRDDFGGEIPDTIEQLVKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAHYW 197
K AN+I+ +G P + DTH+ R+S R+GL G KVE+ L II P + +
Sbjct: 121 KTANLIVGDLYGKPALVCDTHVIRVSGRLGLTDGTKDALKVEKQLAAIIKPDDRLMMCHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
LV HGR VC A KP C C +S CK
Sbjct: 181 LVWHGRLVCSAAKPNCSECRLSGFCKFF 208
>gi|241203453|ref|YP_002974549.1| A/G-specific adenine glycosylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857343|gb|ACS55010.1| A/G-specific adenine glycosylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 367
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EL + + + + ++ ++ Q+T V + +
Sbjct: 14 LLDWYDRHHRELPWRVSPGMAARGVKADPYRVWLSEVMLQQTTVQAVKPYFERFLQRWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + NE P T E L LPGIG
Sbjct: 74 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVANEHGGVFPDTEEDLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P + + + + P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIATPLPAAKPAMREKVALLTPADRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 193 AMMDLGATICTPKRPACSLCPFRGACEALK 222
>gi|56750865|ref|YP_171566.1| mutator MutT protein [Synechococcus elongatus PCC 6301]
gi|81299484|ref|YP_399692.1| A/G-specific DNA-adenine glycosylase [Synechococcus elongatus PCC
7942]
gi|56685824|dbj|BAD79046.1| mutator MutT protein [Synechococcus elongatus PCC 6301]
gi|81168365|gb|ABB56705.1| A/G-specific DNA-adenine glycosylase [Synechococcus elongatus PCC
7942]
Length = 360
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + E+ + +L + + + + ++ ++ Q+ V + E
Sbjct: 1 MFPAAAIPELRRSLLAWYGQQGRDLPWRQTRDPYAIWISEVMLQQTQVQTVIPYYQRWLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + + +G Y ++ N+ + ++ E + P++ + LPG
Sbjct: 61 RFPTVEVLAIADLNAVLKAWEGLGYYS-RARNLHRAAQQIVTEHQGRFPESATAVEALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQY 192
IGR A ILS AF P +D ++ R+ R+G P + Q +I P
Sbjct: 120 IGRTTAGGILSAAFNQPQAILDGNVKRVLARLGALPLPPARAIAQLWQWSEALIDPDQPR 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + ++ G +C RKP C C S C
Sbjct: 180 DFNQAIMDLGATICTPRKPVCDRCPWSFACAAY 212
>gi|296282458|ref|ZP_06860456.1| A/G-specific adenine glycosylase [Citromicrobium bathyomarinum
JL354]
Length = 350
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 79/215 (36%), Gaps = 14/215 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ T + +I + L + + + + ++ ++ Q+T V
Sbjct: 1 MTTRETCAQIPARLLAWYDEHARALPWRSAPGEPPADPYRVWLSEIMLQQTTVAAVKPYF 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ + + A ++ + +G Y + + + + P T +GL
Sbjct: 61 AAFTARWPSVEALAAAPQEDVMAAWAGLGYYSRARNLVKAAGVVAELGGF---PDTEDGL 117
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIP 187
LPG+G A I ++AFG + VD ++ R+ R+ P + + I P
Sbjct: 118 RALPGVGAYTAAAIAAIAFGRRAVVVDANVERVVARLFAIDTPLPGARAAIREGADLITP 177
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++ G +C R P C +C ++ C
Sbjct: 178 DERSGDFAQAMMDLGSRICTPRAPNCDACPLAADC 212
>gi|325107269|ref|YP_004268337.1| DNA-(apurinic or apyrimidinic site) lyase [Planctomyces
brasiliensis DSM 5305]
gi|324967537|gb|ADY58315.1| DNA-(apurinic or apyrimidinic site) lyase [Planctomyces
brasiliensis DSM 5305]
Length = 231
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 80/223 (35%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWP----SPKGELYYVNHFTLIVAVLLSAQSTD 63
S + ++ L +P E+EE+F + + P KG + F ++ +LSAQS D
Sbjct: 2 PSRKTDNTNPSLLSPAEVEEMFRILQKQMPGRTKDAKGPKDQPDPFRSCISCMLSAQSRD 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
N AT LF++A TP++ML + + ++ I+ G+Y K++NI +L++EFD ++
Sbjct: 62 RNTRLATTALFQLACTPEEMLRLSQAEIAAAIKPCGLYNSKAKNIHRFCEVLLSEFDGRV 121
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P+T L LPGIGRK A+++ AF I I VDTH+ R+ NR GLA GKT + +SL
Sbjct: 122 PRTRAELMSLPGIGRKCADIVQQFAFDIDVIAVDTHVHRVCNRTGLAVGKTADATARSLE 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P + H+WL+ G+ +C AR P+C++C +++LC+ +
Sbjct: 182 ERAPEWTLHEGHFWLIQFGKQICHARTPRCENCSLNHLCRYYR 224
>gi|282889532|ref|ZP_06298074.1| hypothetical protein pah_c001o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500545|gb|EFB42822.1| hypothetical protein pah_c001o003 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 206
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ I + + +P+P L + + +TL++AVLLSAQ TD VN T LF +A
Sbjct: 1 MDKKARARRIGKILNAYFPAPAVPLIHQDPYTLLIAVLLSAQCTDARVNIVTPSLFALAH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP++M+ + K+Q IR G+ K++ I LS ILI + + +P + EGL LPG+G
Sbjct: 61 TPEQMVKLPVAKIQEIIRPCGLSPTKAKAIWGLSQILIEKHNGSVPASFEGLEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ AFGIP VDTHI R + R GL+ GKTP +VE+ L + P K H +
Sbjct: 121 KTASVVMAQAFGIPAFPVDTHILRCAKRWGLSKGKTPERVEKDLKELFPRKDWIKVHLQI 180
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
+ R C+AR+ + C I +
Sbjct: 181 IYFARKFCQARQHI-EECPICS 201
>gi|126305800|ref|XP_001375944.1| PREDICTED: similar to mutY homolog [Monodelphis domestica]
Length = 485
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYV-------NH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + +++ V+ ++ Q+ V + T
Sbjct: 45 LLSWYDRAKRDLPWRRRAAAEPDPDRRAYSVWVSEIMLQQTQVATVTGYYTKWMQKWPTL 104
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + +++ +G Y + ++ LPG+GR
Sbjct: 105 QDLAGATLEEVNELWAGLGYYSRGRRLQEGARKVVEELGGCVPRTAEMLQRLLPGVGRYT 164
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSL---LRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R A +P + +++ P + +
Sbjct: 165 AGAIASIAFGQATGVVDGNVSRVLCRTRAIGADPGSPLVTQHLWSLAQQLVEPARPGDFN 224
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC R P C C + + C+ K+
Sbjct: 225 QAAMELGATVCTPRSPLCPECPVRDFCRAQKR 256
>gi|154685326|ref|YP_001420487.1| YfhQ [Bacillus amyloliquefaciens FZB42]
gi|154351177|gb|ABS73256.1| YfhQ [Bacillus amyloliquefaciens FZB42]
Length = 365
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++++ + + L + + + + V+ ++ Q+ V + E
Sbjct: 8 MKQKDIDKFREDLITWFEREQRILPWRENQDPYRVWVSEVMLQQTRVETVIPYFRRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E+K+ +G Y + N+ S + + +P + L G+
Sbjct: 68 FPTVSALAEADEEKVLKAWEGLGYYS-RVRNLQSAVKEVHERYGGVVPAEEKEFGGLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT EQ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEQAVSAFISHEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C +
Sbjct: 187 SEFNQGLMELGAIICTPKSPSCLLCPVQKHCSAFAE 222
>gi|149181258|ref|ZP_01859756.1| hypothetical protein BSG1_05639 [Bacillus sp. SG-1]
gi|148850983|gb|EDL65135.1| hypothetical protein BSG1_05639 [Bacillus sp. SG-1]
Length = 368
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++E + + +L + + + + V+ ++ Q+ V + T
Sbjct: 13 DIETFKRDLLDWFTAEHRQLPWREDSDPYKVWVSEIMLQQTRVDTVIPYFLNFINKFPTI 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + E+ + +G Y ++ N+ S + + + +P + +++L G+G
Sbjct: 73 EALASADEEDVLKAWEGLGYYS-RARNLQSAVKEVRDTYGGVVPSEPKEISKLKGVGPYT 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
A ILS+A+G P VD ++ R+ + +A + E+++ ++I ++ +
Sbjct: 132 AGAILSIAYGKPEPAVDGNVMRVLSRILTIWEDIAKPSSRKVFEEAVRKLISHENPSYFN 191
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P+C C + C +
Sbjct: 192 QALMELGALICTPTSPKCLLCPVREHCNAFNE 223
>gi|212638201|ref|YP_002314721.1| A/G-specific adenine glycosylase [Anoxybacillus flavithermus WK1]
gi|212559681|gb|ACJ32736.1| A/G-specific adenine glycosylase [Anoxybacillus flavithermus WK1]
Length = 373
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + + + +L + + + + V+ ++ Q+ V E T
Sbjct: 27 IEQFQHDLIDWFRTEQRDLPWRKDKDPYKIWVSEVMLQQTRVDTVIPYFYQFIEKFPTLD 86
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+++ +G Y + N+ + + ++ ++P + E + L G+G
Sbjct: 87 ALADAKEEEVLKAWEGLGYYS-RVRNLHAAVKEVKEKYGGRVPASKEQFSSLKGVGPYTT 145
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+GIP VD ++ R+ +RI +A T K EQ + II + +
Sbjct: 146 GAVLSIAYGIPEPAVDGNVMRVLSRIFYITDDIARASTRKKFEQIVSCIISHDDPSDFNQ 205
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC + P C C + C+ +
Sbjct: 206 ALMELGALVCTPKNPSCFLCPVQRHCRAFAE 236
>gi|33862777|ref|NP_894337.1| putative endonuclease [Prochlorococcus marinus str. MIT 9313]
gi|33634693|emb|CAE20679.1| putative endonuclease [Prochlorococcus marinus str. MIT 9313]
Length = 207
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 3/195 (1%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +P P L + + FTL++AV+LSAQ TD VN+ T LFE A TP++M +GE
Sbjct: 1 MRRLNEHYPDPAIPLNHHDDFTLLIAVVLSAQCTDKKVNEVTVSLFEHAQTPEEMYQLGE 60
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ N IR +G+ ++K++NI LS I++ F + +PQ L LPG+G K A+V+++ A
Sbjct: 61 VRILNMIRQLGLSKQKAKNIHRLSEIIVQRFHSSVPQNFNDLESLPGVGHKTASVVMAQA 120
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
FG+PT VDTHI R++ R GL+ G + + E+ L ++ P H ++ +GR C A
Sbjct: 121 FGVPTFPVDTHIHRLAQRWGLSNGSSVLQTEKDLKKLFPKSAWNKLHLQIIYYGRENCTA 180
Query: 209 RKPQCQSCIISNLCK 223
R +C +LC+
Sbjct: 181 RGCDGTTC---DLCR 192
>gi|257869137|ref|ZP_05648790.1| A/G-specific adenine glycosylase [Enterococcus gallinarum EG2]
gi|257803301|gb|EEV32123.1| A/G-specific adenine glycosylase [Enterococcus gallinarum EG2]
Length = 386
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 91/216 (42%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 13 WSKEDIRSFQDKFLNWYHDEKRNLPWRATNDPYAIWISEIMLQQTRVDTVIGYYYRFMEQ 72
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+KL +G Y ++ N+ + + ++ EFD ++PQT+ + L GI
Sbjct: 73 FPTIKDLAGAEEQKLLKAWEGLGYYS-RARNLKAAAQQIMAEFDGEMPQTITDIRSLKGI 131
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A I S+AFG+P +D ++ R+ +R+ ++++ II
Sbjct: 132 GPYTAGAIGSIAFGLPEPAIDGNVMRVVSRLFCIEADIAKASSRGVFDKAMRTIISHDEP 191
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P C+ C + C +Q
Sbjct: 192 GEFNQALMDLGSSICTPTSPLCEECPLQEYCLAYQQ 227
>gi|300774587|ref|ZP_07084450.1| possible DNA-(apurinic or apyrimidinic site) lyase
[Chryseobacterium gleum ATCC 35910]
gi|300506402|gb|EFK37537.1| possible DNA-(apurinic or apyrimidinic site) lyase
[Chryseobacterium gleum ATCC 35910]
Length = 206
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 105/191 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E + +P+ L + + +TL+VAV LSAQ+TD VN+ T LF +A
Sbjct: 1 MTKKQRAEIVQRELDKLYPTTPIPLDHTDPYTLMVAVALSAQTTDKKVNQVTPDLFAVAG 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ+M + E +++ I+ IG+ K++N+ ++ +L+ + +PQT E L LPG+G
Sbjct: 61 TPQRMAKLEEFEIKELIKEIGLSNTKAKNLKRMAELLLERHNGVVPQTYEELEALPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S FG P VDTHI R+ + L GK + E+ ++ P + H +
Sbjct: 121 KTASVVMSQGFGFPAFPVDTHIHRLMTQWKLTSGKNVVETERDAKKLFPEEVWNKLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IFYGREYSPAR 191
>gi|299115359|emb|CBN74185.1| putative endonuclease [Ectocarpus siliculosus]
Length = 514
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 7/225 (3%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
K + P ++ I + +P P + +++ FTL+ VLLSAQ+TD
Sbjct: 244 EKGEGVRERAVPPRL---AEKAALIIQIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTD 300
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
VN T+ LF +A PQ + + + LQ IR++G+ K++++I+LS +++ FD K+
Sbjct: 301 AQVNLVTQELFRVAPNPQSLSKMAHEDLQRTIRSVGLAPTKAKHLIALSQQILDRFDGKV 360
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSL 182
PQT EGL LPG+GRK A V++ AF P VDTHI R++ R GL K +KVE+ L
Sbjct: 361 PQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDL 420
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + P H + GR C+AR +C I C +K+
Sbjct: 421 MAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPI---CSWVKK 462
>gi|45657625|ref|YP_001711.1| endonuclease III [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|45600865|gb|AAS70348.1| endonuclease III [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 232
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 6/223 (2%)
Query: 8 DSYQGNSPLGCLYTP-----KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S L P K IF L ++ L++ + L +AV+LSAQ T
Sbjct: 3 RKNTQESQNRHLKKPDPAFLKWFSRIFSLLRKEFGEVSTPLHFQKDYELAIAVILSAQCT 62
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN+ T LF+ T + + K ++ I + G YR K+++I + L+N+FD K
Sbjct: 63 DERVNQVTPALFKAFPTLESFASSDLKTIETLIFSTGFYRNKAKSIQGFAKKLLNDFDGK 122
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
IP+T+ L LPG GRK ANV+LS G + I VDTH+ R+S +GL P +VE+
Sbjct: 123 IPKTIPELITLPGFGRKTANVVLSEVHGLVEGIVVDTHVNRLSKVLGLTTKNDPVQVEKD 182
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ ++P K+ + +L+ GR CKA + C+ CI+ C
Sbjct: 183 LMSLLPEKYWRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPS 225
>gi|305667099|ref|YP_003863386.1| putative endonuclease [Maribacter sp. HTCC2170]
gi|88708033|gb|EAR00271.1| putative endonuclease [Maribacter sp. HTCC2170]
Length = 220
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 107/191 (56%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ +P+ L + + +TL++AVL+SAQSTDV VNK T LF+ AD
Sbjct: 1 MTKKEKVVFAINKLQELYPTIPVPLNHKDPYTLLIAVLMSAQSTDVRVNKITPLLFDRAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++ I+ +G+ KS+ I LS ILI+++D K+P + L LP +G
Sbjct: 61 NPHDMVKLTVEEIREIIKPVGLSPMKSKGIHGLSQILIDKYDGKVPNDIALLEELPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG P VDTHI R+ R G GK + E+ RI P + H +
Sbjct: 121 KTASVVVSQAFGTPAFPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRIFPKAIWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|227890756|ref|ZP_04008561.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus salivarius
ATCC 11741]
gi|227867165|gb|EEJ74586.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus salivarius
ATCC 11741]
Length = 222
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/210 (32%), Positives = 121/210 (57%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ KE + +P+ L + + ++AV+LSAQ+TD VNK T LF+
Sbjct: 10 MLDSKETQYALQEMGKMFPNATTSLIADSDYHFLLAVILSAQTTDKAVNKITPALFDRYK 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M K++ YI+TIG+Y+ K++ ++ S +L+ F++ +P+T + L L G+GR
Sbjct: 70 YPIDMAKTDPKEVAKYIKTIGLYKNKAKYLVECSKMLVENFNSVVPKTHKELMSLSGVGR 129
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ FG+P VDTH+ RIS R+ + P T + E+ L+ +P + +H+
Sbjct: 130 KTADVVLAERFGVPAFAVDTHVHRISKRLAIVPEDATVRETERILMSKVPKEDWIKSHHR 189
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ ++
Sbjct: 190 MIFWGRYQCMARAPKCETCPLLEICQEGQK 219
>gi|328958580|ref|YP_004375966.1| endonuclease III [Carnobacterium sp. 17-4]
gi|328674904|gb|AEB30950.1| endonuclease III [Carnobacterium sp. 17-4]
Length = 213
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + + + Y +P ++Y N F L++ V+LSAQ+TD +V K + LF+
Sbjct: 1 MLTKEAAQHVVYEIMKLYPDAVPTMHYQNPFQLLMVVILSAQATDESVAKVKERLFKRYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ + +++++YI+TIG+YR K++ I SH L+ FD K+P T E L L GIG
Sbjct: 61 NPQAVSESSPEEIESYIKTIGLYRNKAKYIYKSSHQLLETFDGKVPNTREELQSLTGIGP 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L++AF VDTH+ R+ + TP ++E+ + IIP K+ AH
Sbjct: 121 KSANILLNVAFNQDAFAVDTHVARVCKHHKIVEENATPKQIEERITEIIPAKYWGRAHQA 180
Query: 198 LVLHGRYVCKARKPQCQS 215
++ GR +C R P+C
Sbjct: 181 MISFGREICSPRNPKCHE 198
>gi|325836864|ref|ZP_08166270.1| A/G-specific adenine glycosylase [Turicibacter sp. HGF1]
gi|325491110|gb|EGC93401.1| A/G-specific adenine glycosylase [Turicibacter sp. HGF1]
Length = 362
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + K +L + + + ++V+ ++ Q+ V V + ++ T +
Sbjct: 11 IEQFQKDLIDWYYIVKRDLPWRINRDPYRILVSEIMLQQTQVVTVIPYYERFMKLFPTTK 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ E+ L +G Y + S I P T E + +L G+G A
Sbjct: 71 ELAEADEQTLLKAWEGLGYYSRARNLQESAKMIEA---MGGFPTTHEEILKLKGVGPYTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRI----IPPKHQYNAHY 196
+ S+AFGIP VD ++FR+ +R+ K + + I + +
Sbjct: 128 GAVSSIAFGIPAPAVDGNVFRVMSRVCCIFEDIAKPKTRKVFESVVTDVISHEDPSAFNQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P+C C + C+ KQ
Sbjct: 188 GLMELGATICTPKSPKCLECPVQKHCQAFKQ 218
>gi|255513579|gb|EET89845.1| endonuclease III [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 221
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 121/212 (57%), Gaps = 3/212 (1%)
Query: 16 LGCLYTPKELE-EIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ K E E+ ++ K L Y N + ++VA +LSAQSTD VNK T+ L
Sbjct: 1 MHEPKPAKRFEAEVLSRLKARYGDSMKSALEYSNPWEMLVATMLSAQSTDRQVNKVTREL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +TP + + + LQ +I ++G+YR KS+NII+ + ++++ + +P ++ L +L
Sbjct: 61 FRRYNTPNQFARLKPQTLQRHINSLGLYRNKSKNIIASAKMIMHLYGGNVPDRMDELVKL 120
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+GRK ANV+LS AF I +DTH ++NR+GLA K P K+E+ L+ P K
Sbjct: 121 PGVGRKTANVVLSEAFSASEGIAIDTHCITVANRLGLANSKDPEKIERKLMEKFPKKEWR 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
N L+ GR C AR C+ C+++++C
Sbjct: 181 NVSNLLIALGRDTCTARIKHCERCVLNDICPS 212
>gi|125823602|ref|XP_686698.2| PREDICTED: A/G-specific adenine DNA glycosylase [Danio rerio]
gi|220679596|emb|CAX13618.1| novel protein similar to H.sapiens MUTYH, mutY homolog (E. coli)
(MUTYH) [Danio rerio]
Length = 526
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 85/247 (34%), Gaps = 22/247 (8%)
Query: 3 SSKKSDSYQGNSPLG------CLYTPKELEEIFYLFSLKWPSPKGELYYVN--------- 47
+ K S + + + P E+ + K EL +
Sbjct: 28 NRKSKPSIKEETSETEPSLYHIFHDPTEISVFRSDLMKWYDENKRELPWRTLATTEQDDN 87
Query: 48 --HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T +K+ A +++ +G Y +
Sbjct: 88 IRTYAVWVSEIMLQQTQVATVIDYYNRWMKRWPTVEKLAAATLEEVNQMWSGLGYYSRGR 147
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ T L +LPG+GR A I S+A G T VD ++ R+
Sbjct: 148 RLHEGAQKVVSELDGQMPKTTAGLLKQLPGVGRYTAGAIGSIALGQVTGAVDGNVIRVLC 207
Query: 166 RIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R+ + + + + ++ P+ + + ++ G VC + P C C I
Sbjct: 208 RVRAIGADSSSPAVTDALWRIADALVDPERPGDFNQAMMELGARVCTPKSPVCSQCPIQT 267
Query: 221 LCKRIKQ 227
C K+
Sbjct: 268 HCHAFKK 274
>gi|297564748|ref|YP_003683720.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
gi|296849197|gb|ADH62212.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
Length = 353
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 76/197 (38%), Gaps = 9/197 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + EL + + + ++++ +L Q+ + E T +
Sbjct: 3 RALLDWYQEKRRELPWRGESDPYRILLSEVLLQQTRVNQAIPYYRRFLERFPTLAALAKA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ + G Y + + + E L RLPG+G A + S
Sbjct: 63 PLEEVLRVWQGAGYYARARNLHQLS------QQTPTLVLRHEQLLRLPGLGPYTAAAVAS 116
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AF P VD ++ R+ +R T ++++ +++ + + L+ G VC
Sbjct: 117 IAFSEPVAAVDGNVRRVLSRFFAWENPTSRQIQEKADQLLQRDAPGDWNQALMELGATVC 176
Query: 207 KARKPQCQSCIISNLCK 223
R P+C +C IS C+
Sbjct: 177 TPRNPRCTACPISWGCR 193
>gi|189502030|ref|YP_001957747.1| hypothetical protein Aasi_0620 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497471|gb|ACE06018.1| hypothetical protein Aasi_0620 [Candidatus Amoebophilus asiaticus
5a2]
Length = 217
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/209 (36%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + F+ + P K EL+Y N F L++AV+LSAQ TD VN T LFE
Sbjct: 1 MIQEERYNAVIAYFTRE-PEIKTELHYENAFQLMIAVVLSAQCTDKRVNLVTPQLFEAFP 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP ++ +++ YI++I K++ +I + ++ +F ++P+ +E L L G+GR
Sbjct: 60 TPIELAYSTFEEVFPYIKSISYPNNKTKYLIKAAQDIVEKFQGQVPEDVESLKTLAGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
K A+VI ++ + PT+GVDTH+ R+S RIGL KTP +E+ L++ + + ++
Sbjct: 120 KSAHVIAAVLYNTPTLGVDTHVMRVSKRIGLVDDKAKTPLAIEKQLVQNLSDIYIGKLNH 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
WLV+HGRY C ARKP+C SC ++ C
Sbjct: 180 WLVIHGRYTCLARKPKCSSCALTTCCLYF 208
>gi|257865849|ref|ZP_05645502.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC30]
gi|257872183|ref|ZP_05651836.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC10]
gi|257799783|gb|EEV28835.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC30]
gi|257806347|gb|EEV35169.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC10]
Length = 383
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WDEEKIKTFQETFLTWYHKEKRNLPWRATNDPYAIWISEIMLQQTRVETVIGYFYRFMEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + A E+KL +G Y ++ N+ + + ++ EFD ++PQ++E + L GI
Sbjct: 68 FPTIQDLAAAEEQKLLKVWEGLGYYS-RARNLKAAAQQIVAEFDGEMPQSIEEIRSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A I S+AFG+P +D ++ R+ +R+ ++++ IIPP
Sbjct: 127 GPYTAGAIGSIAFGLPEPAIDGNVMRVVSRLFCIEADIAKASSRRPFDEAMRTIIPPDEP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P+C+ C IS C +
Sbjct: 187 GEFNQALMDLGSRICTPTTPKCEECPISQYCLAYAE 222
>gi|153815713|ref|ZP_01968381.1| hypothetical protein RUMTOR_01951 [Ruminococcus torques ATCC 27756]
gi|331088282|ref|ZP_08337201.1| hypothetical protein HMPREF1025_00784 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846954|gb|EDK23872.1| hypothetical protein RUMTOR_01951 [Ruminococcus torques ATCC 27756]
gi|330408526|gb|EGG87992.1| hypothetical protein HMPREF1025_00784 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 597
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L+E + K +L + N + + ++ ++ Q+ V +
Sbjct: 236 LKESVRPLVEWFRENKRDLPWRKRINAYRVWISEIMLQQTRVEAVKPYYERFLSELPDVS 295
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ E +L +G Y ++ N+ + + ++ ++ + P + E + L GIG A
Sbjct: 296 ALASVEEDRLLKLWEGLGYYN-RARNLKAAACQIMEQYGGRFPSSYEEIRSLKGIGNYTA 354
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I S + IP VD ++ R+ +R+ G KVE+ + IIP + +
Sbjct: 355 GAIGSFVYHIPKPAVDGNVLRVVSRLTADEGDIKTAAVRSKVEELIEEIIPKDAPGDFNQ 414
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
L+ G VC P+C +C + LCK K+
Sbjct: 415 GLIELGAIVCVPNGEPKCAACPLEALCKAHKE 446
>gi|317501903|ref|ZP_07960087.1| A/G-specific adenine glycosylase [Lachnospiraceae bacterium
8_1_57FAA]
gi|316896583|gb|EFV18670.1| A/G-specific adenine glycosylase [Lachnospiraceae bacterium
8_1_57FAA]
Length = 597
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L+E + K +L + N + + ++ ++ Q+ V +
Sbjct: 236 LKESVRPLVEWFRENKRDLPWRKRINAYRVWISEIMLQQTRVEAVKPYYERFLSELPDVS 295
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ E +L +G Y ++ N+ + + ++ ++ + P + E + L GIG A
Sbjct: 296 ALASVEEDRLLKLWEGLGYYN-RARNLKAAACQIMEQYGGRFPSSYEEIRSLKGIGNYTA 354
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I S + IP VD ++ R+ +R+ G KVE+ + IIP + +
Sbjct: 355 GAIGSFVYHIPKPAVDGNVLRVVSRLTADEGDIKTAAVRSKVEELIEEIIPKDAPGDFNQ 414
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
L+ G VC P+C +C + LCK K+
Sbjct: 415 GLIELGAIVCVPNGEPKCAACPLEALCKAHKE 446
>gi|294828041|ref|NP_712344.2| endonuclease III [Leptospira interrogans serovar Lai str. 56601]
gi|293385888|gb|AAN49362.2| endonuclease III [Leptospira interrogans serovar Lai str. 56601]
Length = 239
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 6/223 (2%)
Query: 8 DSYQGNSPLGCLYTP-----KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
S L P K IF L ++ L++ + L +AV+LSAQ T
Sbjct: 10 RKNTQESQNRHLKKPDPAFLKWFSRIFSLLRKEFGEVSTPLHFQKDYELAIAVILSAQCT 69
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
D VN+ T LF+ T + + K ++ I + G YR K+++I + L+N+FD K
Sbjct: 70 DERVNQVTPALFKAFPTLESFASSDLKTIETLIFSTGFYRNKAKSIQGFAKKLLNDFDGK 129
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
IP+T+ L LPG GRK ANV+LS G + I VDTH+ R+S +GL P +VE+
Sbjct: 130 IPKTIPELITLPGFGRKTANVVLSEVHGLVEGIVVDTHVNRLSKVLGLTTKNDPVQVEKD 189
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ ++P K+ + +L+ GR CKA + C+ CI+ C
Sbjct: 190 LMSLLPEKYWRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPS 232
>gi|148253815|ref|YP_001238400.1| A/G-specific DNA-adenine glycosylase [Bradyrhizobium sp. BTAi1]
gi|146405988|gb|ABQ34494.1| A/G-specific DNA-adenine glycosylase [Bradyrhizobium sp. BTAi1]
Length = 367
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIV 53
MVSS S + + P T + + + + L + + + + +
Sbjct: 1 MVSSA-LPSKRKSQPENRASTARPAQ-----LLAWYDRHRRRLPWRAPAGQRSDPYRVWL 54
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+ ++ Q+T V + + + + +G Y ++ N+ + +
Sbjct: 55 SEIMLQQTTVKAVGPYFEKFLARWPDVSALGSAELDDVLRMWAGLGYYS-RARNLHACAV 113
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
++ E P T EGL +LPGIG A I ++AF T+ VD +I R+ +R+
Sbjct: 114 TVLREHGGVFPDTEEGLRKLPGIGPYTAAAIAAIAFDRLTMPVDGNIERVVSRLFAVEEA 173
Query: 174 TP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P +++ ++ P ++ L+ G +C +KP C C ++ C
Sbjct: 174 LPQAKPQIQALAATLLGPARAGDSAQALMDLGATICTPKKPACSLCPLNEDC 225
>gi|256827275|ref|YP_003151234.1| endonuclease III [Cryptobacterium curtum DSM 15641]
gi|256583418|gb|ACU94552.1| endonuclease III [Cryptobacterium curtum DSM 15641]
Length = 222
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + + L Y + F L+VAV+LSAQ TD VNK T LF T
Sbjct: 9 KRERAAEIEKRMFDHYGAGACSLDYECDPFRLLVAVVLSAQCTDAAVNKVTPSLFAAYPT 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + + I ++G +R K+ +++ LS +L+ +F ++P ++ L LPG+GRK
Sbjct: 69 PAALAQANVTDVATIIHSLGFFRAKATHLVHLSQVLMTDFGGEVPNDIDALQTLPGVGRK 128
Query: 140 GANVILSMAFGIPTIG-VDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHY 196
ANV++ AF P VDTH+FRI++++ A TP K E +LL+ P K ++
Sbjct: 129 TANVVMCEAFKNPQGIAVDTHVFRIAHKLKFAGPSADTPAKTEAALLKTYPQKDWLYINH 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V GR C AR+P+C C I++LC +
Sbjct: 189 QWVHFGREFCIARRPRCADCFIADLCPSASK 219
>gi|293375454|ref|ZP_06621735.1| A/G-specific adenine glycosylase [Turicibacter sanguinis PC909]
gi|292646007|gb|EFF64036.1| A/G-specific adenine glycosylase [Turicibacter sanguinis PC909]
Length = 362
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + K +L + + + ++V+ ++ Q+ V V + ++ T +
Sbjct: 11 IEQFQKDLIDWYYIVKRDLPWRINRDPYRILVSEIMLQQTQVVTVIPYYERFMKLFPTTK 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ E+ L +G Y + S I P T E + +L G+G A
Sbjct: 71 ELAEADEQTLLKAWEGLGYYSRARNLQESAKMIEA---MGGFPTTHEEILKLKGVGPYTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRI----IPPKHQYNAHY 196
+ S+AFGIP VD ++FR+ +R+ K + + I + +
Sbjct: 128 GAVSSIAFGIPAPAVDGNVFRVMSRVCCIFEDIAKPKTRKVFESVVTDVISHEDPSAFNQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P+C C + C+ KQ
Sbjct: 188 GLMELGATICTPKSPKCLECPVQKHCQAFKQ 218
>gi|328943407|ref|ZP_08240872.1| endonuclease III [Atopobium vaginae DSM 15829]
gi|327491376|gb|EGF23150.1| endonuclease III [Atopobium vaginae DSM 15829]
Length = 220
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ K + + ++ K L Y N FTL + V+LSAQ+TD VNK T L
Sbjct: 2 AKESQRSKQKRACAFYEILHARYRGAKSALTYHNPFTLTICVMLSAQTTDAAVNKVTPQL 61
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F T + M + + IRTIG +R K+++ + S +++++F ++PQT+E L RL
Sbjct: 62 FARWPTAKHMAQAKPEDIGEVIRTIGFWRAKAKHCVEASQMIMSDFAGEVPQTMEELMRL 121
Query: 134 PGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
PG+GRK AN++L+ AF I VDTH+FRIS R+ KTP + EQ LL+++PP
Sbjct: 122 PGVGRKTANIVLNKAFNKTQGIAVDTHVFRISTRLQFTRAKTPLEAEQDLLKLLPPTLWS 181
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + + GR +CKA+ P C++CI LC +
Sbjct: 182 SVNEEWIHFGREICKAKNPCCETCIARALCPSYAK 216
>gi|240103334|ref|YP_002959643.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
gi|239910888|gb|ACS33779.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
Length = 230
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+I + P K L + + ++ ++S + D + + LF+
Sbjct: 15 KRRRAEKIVEILMRTHPREK--LLIGDPYRTLIHCIISQRMRDEVTYRVWEELFKKYGDI 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSE--NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++ ++R G+ K++ I+ S I++ ++ K+P ++ L +LPGIGR
Sbjct: 73 ETIANTPVDEMREFLRKRGVGLWKTKGEWIVKASRIILEKYGGKVPDDIKELMKLPGIGR 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG I VDTH+ RIS R+GLAP + P KVE+ L+ +IP + ++
Sbjct: 133 KCANIVLAYGFGRQAIPVDTHVNRISKRLGLAPPRVPPEKVEEYLMELIPKEKWIYVNHA 192
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+V HGR +C+ +P+C+SC + LC K
Sbjct: 193 MVDHGRSICRPIRPKCESCPLKELCPYAK 221
>gi|320161307|ref|YP_004174531.1| A/G-specific adenine glycosylase [Anaerolinea thermophila UNI-1]
gi|319995160|dbj|BAJ63931.1| A/G-specific adenine glycosylase [Anaerolinea thermophila UNI-1]
Length = 364
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+I + L + + ++V+ ++ Q+ V + E T +
Sbjct: 4 QISRQLLDWYQIHARNLPWRKEESAPYAVLVSEIMLQQTRVETVIPYYQRWMERFPTLES 63
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +++ Y +G Y +++N+ + IL+ + + PQ +E L +LPGIG A
Sbjct: 64 LAQASLEEVLRYWEGLGYYS-RAKNLHRTAQILVQTYRGEFPQHVEHLRKLPGIGDYTAA 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRI----IPPKHQYNAHYW 197
I S+AFG +D ++ R+ +R+ L + + ++ L + +P + + +
Sbjct: 123 AIASIAFGQKVAAIDGNVRRVLSRLFLISEPLSLPETQKKLKSLAVQCLPAEQVGDYNQA 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G +C R P+C C +S LC+ +
Sbjct: 183 LMDLGALICLPRSPKCLQCPLSVLCRAYQ 211
>gi|218960389|ref|YP_001740164.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans]
gi|167729046|emb|CAO79957.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans]
Length = 222
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 6/212 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGE------LYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
++++ + + S K + + F ++VA +LSA++ D K + L
Sbjct: 9 MQNRDIDTVMERLKKHFYSVKTPVVDLIQIKTEDPFKVLVATILSARTKDETTAKVVEKL 68
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + + I +L I +G +R K++++ L +L +F+ KIP+ ++ L L
Sbjct: 69 FPKVQKIEDLEKIPLAELDALITPVGFHRVKAKHLKELPKVLKEKFNGKIPEEIDDLLEL 128
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK AN++ ++AF P I VD H+ RI NR G KTP + E +L + +P K+ N
Sbjct: 129 PGVGRKTANLVRAVAFQKPAICVDVHVHRICNRWGYIQTKTPLETEMTLRQKLPEKYWLN 188
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +LV G+ +C RKP+C+ C ++ C R+
Sbjct: 189 FNSYLVAFGQNLCTPRKPKCEICPVAEFCNRV 220
>gi|239831360|ref|ZP_04679689.1| A/G-specific adenine glycosylase [Ochrobactrum intermedium LMG
3301]
gi|239823627|gb|EEQ95195.1| A/G-specific adenine glycosylase [Ochrobactrum intermedium LMG
3301]
Length = 396
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 16/211 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L + + + + ++ ++ Q+T V E
Sbjct: 44 KLLHWYDRHHRVLPWRISPSEQASGIRPDPYRVWLSEIMLQQTTVEAVKSYFVKFIERWP 103
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
Q M E + +G Y ++ N+ + ++ + D K P + L LPGIG
Sbjct: 104 AVQAMALASEDDILRAWAGLGYYS-RARNLKKCADAVVRQHDGKFPGSAAALKELPGIGD 162
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAH 195
+ I ++AFG VD ++ R+ +R+ P ++ + ++ P +
Sbjct: 163 YTSAAIAAIAFGEAVAVVDGNVERVISRLYTIDTPLPAAKPEIRALMGQLTPIDRPGDFA 222
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C R+P C C +++ C +K
Sbjct: 223 QAMMDLGATICTPRRPACAICPLNDDCMALK 253
>gi|225850162|ref|YP_002730396.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Persephonella marina EX-H1]
gi|225646537|gb|ACO04723.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Persephonella marina EX-H1]
Length = 219
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 118/213 (55%), Gaps = 7/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPS---PKGEL----YYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ ++ ++ + ++P P L + ++++ ++S ++ D + ++
Sbjct: 1 MSREDFIKVLNILKREFPRWDAPVVSLMAKRDKRTPYQILISTIISLRTKDQVTAEVSER 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF +AD P ML I E+K+ I G YR K++ I +S ++ +F K+P +++ L +
Sbjct: 61 LFRLADNPYDMLKIPEEKIAEAIYPAGFYRNKAKVIKEISGKIVKDFGGKVPDSIDELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN+++++ +G P I VDTH+ RISNR+G KT + E +L + +P ++
Sbjct: 121 LKGVGRKTANLVVALGYGKPAICVDTHVHRISNRLGFVKTKTAEETEMALRKKVPREYWN 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ V G+ +CK P+C C +S+ C+++
Sbjct: 181 EINDLFVAFGQTICKPVSPKCSECPVSSYCEKV 213
>gi|308067481|ref|YP_003869086.1| A/G-specific adenine glycosylase [Paenibacillus polymyxa E681]
gi|305856760|gb|ADM68548.1| A/G-specific adenine glycosylase [Paenibacillus polymyxa E681]
Length = 410
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N F + ++ ++ Q+ V T + + E
Sbjct: 16 LLNWYTRNKRDLPWRRHRNPFYIWISEIMLQQTRVDTVIPYFNRFIARFPTIEALAEALE 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + + ++ ++P + + L G+G I+S+A
Sbjct: 76 EDVLKLWEGLGYYS-RARNLQTAAKQVVELHGGQVPDDTQAVAALKGVGPYTTGAIMSIA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F P VD ++ R+ +R L +E + +IP + + L+ G
Sbjct: 135 FNRPEPAVDGNVMRVLSRYFLIEEDIMKGSTRAHMESLVRELIPEGRASDFNQALMELGA 194
Query: 204 YVCKARKPQCQSCIISNLC 222
VC + P C +C + C
Sbjct: 195 LVCTPKSPHCLTCPVMEHC 213
>gi|310640240|ref|YP_003944998.1| a/g-specific adenine glycosylase [Paenibacillus polymyxa SC2]
gi|309245190|gb|ADO54757.1| A/G-specific adenine glycosylase [Paenibacillus polymyxa SC2]
Length = 410
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N F + ++ ++ Q+ V T + + E
Sbjct: 16 LLNWYTRNKRDLPWRRHRNPFYIWISEIMLQQTRVDTVIPYFNRFIARFPTIEALAEAPE 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + + ++ ++P + + L G+G I+S+A
Sbjct: 76 EDVLKLWEGLGYYS-RARNLQTAAKQVVELHGGQVPDDTQAVAALKGVGPYTTGAIMSIA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F P VD ++ R+ +R L +E + +IP + + L+ G
Sbjct: 135 FNRPEPAVDGNVMRVLSRYFLIEEDIMKGSTRAHMESLVRELIPEGRASDFNQALMELGA 194
Query: 204 YVCKARKPQCQSCIISNLC 222
VC + P C +C + C
Sbjct: 195 LVCTPKSPHCLTCPVMEHC 213
>gi|228900227|ref|ZP_04064458.1| endonuclease III [Bacillus thuringiensis IBL 4222]
gi|228907280|ref|ZP_04071139.1| endonuclease III [Bacillus thuringiensis IBL 200]
gi|228938758|ref|ZP_04101361.1| endonuclease III [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228964624|ref|ZP_04125732.1| endonuclease III [Bacillus thuringiensis serovar sotto str. T04001]
gi|228971640|ref|ZP_04132262.1| endonuclease III [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978249|ref|ZP_04138626.1| endonuclease III [Bacillus thuringiensis Bt407]
gi|228781266|gb|EEM29467.1| endonuclease III [Bacillus thuringiensis Bt407]
gi|228788053|gb|EEM36010.1| endonuclease III [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228795055|gb|EEM42553.1| endonuclease III [Bacillus thuringiensis serovar sotto str. T04001]
gi|228820933|gb|EEM66955.1| endonuclease III [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228852334|gb|EEM97129.1| endonuclease III [Bacillus thuringiensis IBL 200]
gi|228859396|gb|EEN03825.1| endonuclease III [Bacillus thuringiensis IBL 4222]
Length = 202
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N F L++AV LSAQ TDV VNK T++LF+ TP+ L++ ++L
Sbjct: 1 MADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEEL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Q IR+IG+YR K++NI L +L+++++ ++P + LT+LPG+GRK ANV++S+AFGI
Sbjct: 61 QQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPSDRDELTKLPGVGRKTANVVVSVAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R+S R+ + + +VE++L++ +P H+ ++ GRY CKA++
Sbjct: 121 PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMDEWGVTHHRMIFFGRYHCKAQR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC+ C + +C+ K+
Sbjct: 181 PQCEECRLLEVCREGKK 197
>gi|251799106|ref|YP_003013837.1| A/G-specific adenine glycosylase [Paenibacillus sp. JDR-2]
gi|247546732|gb|ACT03751.1| A/G-specific adenine glycosylase [Paenibacillus sp. JDR-2]
Length = 398
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 84/213 (39%), Gaps = 10/213 (4%)
Query: 21 TPKELEEIFYL-FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+E + F + K +L + + + + V+ ++ Q+ V +
Sbjct: 5 NKEEAKAYFSRELLTWYRRIKRDLPWRMNQDPYRVWVSEIMLQQTRVDTVIPYYERFMNK 64
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ +G Y ++ N+ + + ++ + +P + L G+
Sbjct: 65 FPTVRALAEAPEPEVLKCWEGLGYYS-RARNLQAGAREVVERYGGIVPDDKVAVAGLKGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G I+S+AF P VD ++ R+ +R +A T +E+ + +IP
Sbjct: 124 GPYTTGAIMSIAFNRPEPAVDGNVMRVLSRYFCLEDDIAKPATRVGIEKLAVSLIPEGAA 183
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + L+ G VC + P C C + C+
Sbjct: 184 GDFNQALMELGALVCTPKSPSCLPCPVMEHCEA 216
>gi|156405489|ref|XP_001640764.1| predicted protein [Nematostella vectensis]
gi|156227900|gb|EDO48701.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 87/245 (35%), Gaps = 20/245 (8%)
Query: 3 SSKKSDSYQGNSPLGCL-----YTPKELEEIFYLFSLKWPSPKGELYYV----------N 47
+SKK+ S S + +T +++ I + K L +
Sbjct: 4 TSKKAPSKAAKSAHQPINHSHEFTEDDIQLIRENLLRWYDINKRSLPWRAYATEQDANIR 63
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + + + + +++ +G Y +
Sbjct: 64 AYAVWVSEIMLQQTQVATVVDYYNRWMKNWPSLEALARASLEEVNECWSGLGYYSRARRL 123
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ ++ + LPG+G A I S+AFG T VD ++ R+ +R+
Sbjct: 124 HEAAIKVVNELDGKIPTNAAKLQKELPGVGLYTAGAIASIAFGEATGVVDGNVIRVLSRL 183
Query: 168 GLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ R++P + + ++ G +C + PQC C++ + C
Sbjct: 184 RRIGADMTSNTTMDHFWSLAHRLVPNDRPGDFNQAMMEFGATLCTPKTPQCSKCVLRSSC 243
Query: 223 KRIKQ 227
+ Q
Sbjct: 244 QAHSQ 248
>gi|158337045|ref|YP_001518220.1| A/G-specific adenine glycosylase [Acaryochloris marina MBIC11017]
gi|158307286|gb|ABW28903.1| A/G-specific adenine glycosylase [Acaryochloris marina MBIC11017]
Length = 368
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 9/214 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + +L + + + + V+ ++ Q+ V +
Sbjct: 6 LKKLPIAKLRTALRTWYQESGRDLPWRQTQDPYAIWVSEIMLQQTQVKTVIPYYQRWLAQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + A ++ + + +G Y ++ N+ + ++ ++D P+ + + LPGI
Sbjct: 66 FPTIASLAAAPQQDVLKVWQGLGYYA-RARNLHRAAQQVVADWDGTFPEQFDQVMSLPGI 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR----IIPPKHQY 192
GR A ILS AF PT +D ++ RI LA + P KV L ++ P++
Sbjct: 125 GRTTAGGILSAAFNQPTPILDGNVKRIL-VRLLAIQQPPKKVLADLWEASTALLDPEYPR 183
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C ++PQC C + C+ +
Sbjct: 184 EFNQAFMDLGATLCTPKQPQCDRCPWRSDCQAYR 217
>gi|269215536|ref|ZP_06159390.1| endonuclease III [Slackia exigua ATCC 700122]
gi|269131023|gb|EEZ62098.1| endonuclease III [Slackia exigua ATCC 700122]
Length = 219
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 3/207 (1%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
EI ++ L +++ FTL +AV+LSAQ TD VNK T LF
Sbjct: 9 KRARAAEIERRMFERYGEGACSLDHIDPFTLTIAVVLSAQCTDAAVNKVTPILFAEFPDA 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +++ I +G +R K++ +I + ++ +F +P+T++ LTRLPG+GRK
Sbjct: 69 YALANAPLARVEEIIHPLGFFRTKAKKVIGCAQTVVCDFGGVVPRTMDELTRLPGVGRKT 128
Query: 141 ANVILSM-AFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
ANV+++ I VDTH+FRI++R+G A TP KVE LLRI P ++
Sbjct: 129 ANVVMAQAFRDAQGIAVDTHVFRIAHRLGFATRNDDTPEKVELKLLRIYPKPDWLFINHQ 188
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
V GR C+AR P+C C ++++C
Sbjct: 189 WVHFGREFCQARNPRCAECFVADVCPF 215
>gi|325292180|ref|YP_004278044.1| A/G-specific adenine glycosylase [Agrobacterium sp. H13-3]
gi|325060033|gb|ADY63724.1| A/G-specific adenine glycosylase [Agrobacterium sp. H13-3]
Length = 382
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EL + + + + ++ ++ Q+T V
Sbjct: 29 LLAWYDRHHRELPWRTSPAMAAQGKRADPYHVWLSEVMLQQTTVQAVKPYFLKFLATWPH 88
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + + +G Y ++ N+ + + + P T EGL +LPGIG
Sbjct: 89 VSDLAAAPVEDVMAAWAGLGYYA-RARNLKKCAEAVAKDHGGVFPDTEEGLKKLPGIGDY 147
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
+ + ++AF +D ++ R+ +R+ P ++ + + P +
Sbjct: 148 TSAAVAAIAFNRQAAVMDGNVERVISRLFAIDAPLPGSKPAMKAKVAELTPSDRPGDFAQ 207
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C ++P C C + C
Sbjct: 208 AMMDLGATICTPKRPACALCPFNGDC 233
>gi|118590780|ref|ZP_01548181.1| probable a/g-specific adenine glycosylase protein [Stappia
aggregata IAM 12614]
gi|118436756|gb|EAV43396.1| probable a/g-specific adenine glycosylase protein [Stappia
aggregata IAM 12614]
Length = 359
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 81/209 (38%), Gaps = 16/209 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + L + + + + ++ ++ Q+T V +
Sbjct: 8 RLLLDWYDRHARRLPWRVSPEDRNLGEVPDPYRIWLSEVMLQQTTVAAVKDYFEKFTRSW 67
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + E+ + +G Y ++ N+ + + + D + P+ E L +LPGIG
Sbjct: 68 PTVTDLAEAAEEDVMKAWAGLGYYS-RARNLKKCAETVARDHDGRFPEDEEALLKLPGIG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNA 194
A I ++AF VD ++ R+ R+ P+ +++ + + P + +
Sbjct: 127 PYTAAAIATIAFDRHAAVVDGNVERVLTRLFQIETPLPDAKPEIKAKMAELTPDERPGDF 186
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ G +C R+P C C ++C+
Sbjct: 187 AQAVMDLGATICTPRRPACAICPWRSICR 215
>gi|258593592|emb|CBE69933.1| A/G-specific adenine glycosylase (fragment) [NC10 bacterium 'Dutch
sediment']
Length = 238
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + +L + + + ++V+ ++ Q+ V + T Q+
Sbjct: 15 RKFQQRLLRWYARHRRDLPWRKTSDPYKILVSEVMLQQTQVDRVVPKYQEFIRKYPTLQE 74
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ R +G + + +++ +++ KIP +LE L GIGR A
Sbjct: 75 LAGASVSDVEASWRPLGY-NIRPVRLHAIAQQAVDQHGGKIPSSLEELQAFKGIGRYTAG 133
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYNAHYW 197
++S AF +DT++ R+ R+ L P K+ + +IP Y+ +
Sbjct: 134 AVMSFAFRKDAPILDTNVKRLLQRVFLGPIKSNGSKSVKHLWDLSTVLIPNGKAYDFNQA 193
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C ARKP C C + LC+
Sbjct: 194 MMDFGALICTARKPNCPICPMRPLCRSY 221
>gi|306842224|ref|ZP_07474888.1| A/G-specific adenine glycosylase [Brucella sp. BO2]
gi|306287666|gb|EFM59110.1| A/G-specific adenine glycosylase [Brucella sp. BO2]
Length = 358
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRILPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFVERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPAAKAQIRALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNEGC 211
>gi|303229727|ref|ZP_07316513.1| A/G-specific adenine glycosylase [Veillonella atypica
ACS-134-V-Col7a]
gi|302515624|gb|EFL57580.1| A/G-specific adenine glycosylase [Veillonella atypica
ACS-134-V-Col7a]
Length = 366
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKH 72
+ + PK + + + K +L + + + + V+ ++S Q+ + +
Sbjct: 1 MKEMNNPKWVPQ----LLAWYDVNKRDLPWRDCGDPYKVWVSEVMSQQTRIEAMKPYYDN 56
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ T + + E ++ + + +G Y ++ N+ ++N + +P + +
Sbjct: 57 WMRLFPTLEDLAKATEDEVVHAWQGLGYYS-RARNLRLGVQDVVNNYGGVVPHNRKDMES 115
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIP 187
L G+G A +LSMA+G P + VD ++ RI R+ + K + + +P
Sbjct: 116 LKGVGSYTAGAVLSMAYGEPEVAVDGNVLRIYARLYGIFDDILGTKGKKAITAIVENTLP 175
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P+C C I N+C +
Sbjct: 176 HDRPGDFNQALMDFGSAVCIPKTPRCGECPIVNMCHAYQ 214
>gi|160879113|ref|YP_001558081.1| DNA-(apurinic or apyrimidinic site) lyase [Clostridium
phytofermentans ISDg]
gi|160427779|gb|ABX41342.1| DNA-(apurinic or apyrimidinic site) lyase [Clostridium
phytofermentans ISDg]
Length = 212
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 127/207 (61%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +++I + ++ + K + + L++A++LSAQSTD VN+ L+ +
Sbjct: 1 MINESIQQILIILDKEYGTTKEGFLHYADWQLLLAIMLSAQSTDKQVNEVLPGLWNRFSS 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+M +++++ IR+IG+Y+ K++N+ +I+E+ K+P T+ L +L G+GRK
Sbjct: 61 ICQMAEAPVEEIEDQIRSIGLYKSKAKNMKQCCKQVIDEYGGKVPTTINELVKLSGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A + L+ A+ IP + VDTH+ RI+ R+G A GK P +VEQ L++I+P ++ ++ L+
Sbjct: 121 SATLFLADAYDIPGVTVDTHVLRIAKRLGWAEGKNPVQVEQELMKILPKENWNRINFQLI 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
HGR VC ARK C+ C+++ C++ +
Sbjct: 181 YHGRSVCTARKCYCERCLLNQWCEKKR 207
>gi|13541635|ref|NP_111323.1| endonuclease III [Thermoplasma volcanium GSS1]
gi|14325034|dbj|BAB59960.1| endonuclease III [Thermoplasma volcanium GSS1]
Length = 215
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 119/208 (57%), Gaps = 2/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ K + +++ + +PK + + + F +++ +LS ++ D ++A L+E T
Sbjct: 4 WDEKSIRDVYERIKDQ--APKHKFVFHDPFWMLITTVLSQRTKDETTDQAALALYERYRT 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + + + I +G +R K++ II ++ I+ +E+ +K+P +++ L LPG+G K
Sbjct: 62 IEGLASADVSDVGSIISKVGFWRVKAKKIIMIAQIIRDEYGSKVPASMDQLLSLPGVGVK 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A+V+L+ GIP I VDTH+FRIS+RIG + KTP + Q L++IIP + LV
Sbjct: 122 TASVVLAEGLGIPMIAVDTHVFRISHRIGWSSSKTPEQTAQDLMQIIPKDLWIGFNPTLV 181
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G+ VC+ P+C C I+ C+ K+
Sbjct: 182 EFGKAVCRPVSPKCSMCRINEFCEYYKK 209
>gi|116250851|ref|YP_766689.1| A/G-specific adenine glycosylase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255499|emb|CAK06575.1| putative A/G-specific adenine glycosylase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 367
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 76/210 (36%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + +
Sbjct: 14 LLDWYDRHHRDLPWRVSPGMAARGVKADPYRVWLSEVMLQQTTVQAVKPYFERFLQRWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P T EGL LPGIG
Sbjct: 74 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAAAVAKEHGGIFPDTEEGLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P + + + + P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAISTPLPAAKPAMREKVALLTPADRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 193 AMMDLGATICTPKRPACSLCPFRGACEALK 222
>gi|260906429|ref|ZP_05914751.1| A/G-specific adenine glycosylase [Brevibacterium linens BL2]
Length = 345
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 10/232 (4%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLS 58
+S +S S + +SP + ++ + + S L + + + ++V+ ++S
Sbjct: 5 ASAESRSSRPDSPFPAVANT-DIHRVRETIITWFESAARPLPWRDADTTAWAVLVSEIMS 63
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
Q+ V + + TP + ++ + +G R+ + + ++ E
Sbjct: 64 QQTPVSRVEPRWREWMQKWPTPADLAQAPTAEVLHRWDRLGYPRRALR-LQEAARVITEE 122
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT---P 175
D +PQT + L RLPGIG A + S A G T +DT++ R+ R+ + P
Sbjct: 123 LDGHVPQTAKELERLPGIGSYTAAAVTSFAHGERTTVLDTNVRRVLIRLFAGRDRPSPSP 182
Query: 176 NKVEQSLL-RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ E + +P + ++ G VC AR PQC++C ++++C K
Sbjct: 183 GRAETEWAGQFVPETEHKQWNAGVMEFGALVCTARNPQCETCPLNDICAWQK 234
>gi|295136312|ref|YP_003586988.1| A/G-specific adenine glycosylase [Zunongwangia profunda SM-A87]
gi|294984327|gb|ADF54792.1| A/G-specific adenine glycosylase [Zunongwangia profunda SM-A87]
Length = 350
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + EL + N + + ++ ++ Q+ + +
Sbjct: 5 KTLINWYLKSRRELPWRETTNPYNIWLSEIMLQQTRIEQGLPYYNKFIAEFPSVFDLADA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ K+ + +G Y ++ N+ + + + E + + P+ GL +L G+G A+ I S
Sbjct: 65 SQDKVMKLWQGLGYYS-RARNLHATAKHVAYELNGEFPKDYNGLLKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+++ P VD +++R+ +R + + + ++ K N + L+
Sbjct: 124 ISYKEPVAVVDGNVYRVLSRYFNIDTPINSTEGVKEFKALAMELLDKKDPSNFNQALMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C SC + C +K+
Sbjct: 184 GALQCKPKNPLCDSCPFNTSCLALKE 209
>gi|307565307|ref|ZP_07627800.1| endonuclease III [Prevotella amnii CRIS 21A-A]
gi|307345976|gb|EFN91320.1| endonuclease III [Prevotella amnii CRIS 21A-A]
Length = 216
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + F EL + + F L+ A LLSAQ TD +N T LF
Sbjct: 1 MTREERYKIVMDYFRSHVGEVTTELIFGSAFQLLCATLLSAQCTDKRINAITPALFLHYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M +++ YI+++ K+++++ ++ +L N +D ++P L +LPG+GR
Sbjct: 61 NAKIMAKAKIEEIYEYIKSVSYPNAKAKHLVEMAQMLTNSYDGEVPSDPNELIKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+ ++ FG PT+ VDTH++R+S+R+GL P +P KVE L++ I K NAH+
Sbjct: 121 KTANVVQAVWFGKPTLAVDTHVYRVSHRLGLVPKDTNSPRKVEDYLMKHIDKKEVTNAHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
W++LHGRY+CK+ +P C C C ++
Sbjct: 181 WILLHGRYICKSIRPLCTKCPFDIFCPKL 209
>gi|312870016|ref|ZP_07730153.1| endonuclease III [Lactobacillus oris PB013-T2-3]
gi|311094413|gb|EFQ52720.1| endonuclease III [Lactobacillus oris PB013-T2-3]
Length = 213
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 121/205 (59%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ + + ++P L HF ++AV+LSAQSTD +VN+ T LFE
Sbjct: 1 MLSNAEIYQAIQVMRREYPDAGTTLTADTHFHFLLAVILSAQSTDQSVNQLTPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ + A + ++ YI+ +G+Y K++ +++ + L+ +F+ +PQTL+ LT LPG+GR
Sbjct: 61 LPKDLAAAEPEDVEPYIKRLGLYHNKAKYLVNCARKLVTDFNGGVPQTLKELTSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ F IP VDTH+ R++ R+ + P K +E+ L+ +P +AH+
Sbjct: 121 KVADVVLAECFTIPAFPVDTHVSRVARRLAMVPPKASLLAIEKKLMEAVPEDKWLDAHHS 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ GRY C AR P+C C + +C
Sbjct: 181 MIFWGRYRCMARNPRCSDCPLLPMC 205
>gi|295702588|ref|YP_003595663.1| A/G-specific adenine glycosylase [Bacillus megaterium DSM 319]
gi|294800247|gb|ADF37313.1| A/G-specific adenine glycosylase [Bacillus megaterium DSM 319]
Length = 364
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 83/212 (39%), Gaps = 9/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + L + + + + V+ ++ Q+ V + T
Sbjct: 12 DIRAFQDDLISWFEQEQRILPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNNFISKFPTI 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E + +G Y ++ N+ + + ++ ++P T +++L G+G
Sbjct: 72 KDLAYANEDDVLKAWEGLGYYS-RARNLQTAVREVHEQYGGEVPNTPAEISKLKGVGPYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
ILS+A+G+P VD ++ R+ + +A KT E + II + +
Sbjct: 131 TGAILSIAYGVPQPAVDGNVMRVLSRILSVWDDIAKPKTRKLFEDIVHEIISKDNPSYFN 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC P C C + C+ ++
Sbjct: 191 QGMMELGAIVCTPTSPSCLLCPVREHCRAFEE 222
>gi|260432299|ref|ZP_05786270.1| A/G-specific adenine glycosylase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416127|gb|EEX09386.1| A/G-specific adenine glycosylase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 363
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 81/210 (38%), Gaps = 16/210 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +L + + + + ++ ++ Q+T V
Sbjct: 11 RSLLAWYDRHARDLPWRVSPADRAAGMKPDPYRVWLSEVMLQQTTVAAVRDYFLRFTSRW 70
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + A + ++ +G Y ++ N++ + ++++ D + P + + L +LPGIG
Sbjct: 71 PDVRALAAAADDEVMAEWAGLGYYA-RARNLLKCARAVVDQHDGRFPDSHDALLKLPGIG 129
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNA 194
A I ++AF P +D ++ R+ R+ P ++ + P + +
Sbjct: 130 PYTAAAIAAIAFDRPETVLDGNVERVMARLHDIHDPLPKSKPLLKAKAAALTPEERPGDY 189
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C + P C C + + C+
Sbjct: 190 AQAVMDLGATICTPKSPACGICPLRDPCQA 219
>gi|108759592|ref|YP_630211.1| A/G-specific adenine glycosylase [Myxococcus xanthus DK 1622]
gi|108463472|gb|ABF88657.1| A/G-specific adenine glycosylase [Myxococcus xanthus DK 1622]
Length = 390
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 92/235 (39%), Gaps = 11/235 (4%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELE--EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLL 57
+ K ++PL TP + + + K +L + + + + ++ ++
Sbjct: 10 ARKPRAGRPPSAPLAATVTPAQAHLASVRGPLLDWYDRNKRDLPWRRTRDSYAIWLSEVM 69
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + T + + + + + +G Y ++ N+ + ++
Sbjct: 70 LQQTQVSTVIPYWERFLARFPTARALASAPLDDVLAGWKGLGYYS-RARNLHRAAQEVVA 128
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
F +P T L LPG GR A + S+AFG VD ++ R+ +RI G ++
Sbjct: 129 RFGGTLPSTAAELLELPGFGRYTAGAVASIAFGEEAPLVDGNVARVFSRIFEVEGLPGDR 188
Query: 178 VEQSLL-----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ L ++ + + + L+ HG C+ P C C + C ++
Sbjct: 189 QREATLWALATALVKGERPGDFNQALMEHGATTCRPENPLCLLCPVRGACVAFRK 243
>gi|265983648|ref|ZP_06096383.1| A/G-specific adenine glycosylase [Brucella sp. 83/13]
gi|306837785|ref|ZP_07470649.1| A/G-specific adenine glycosylase [Brucella sp. NF 2653]
gi|264662240|gb|EEZ32501.1| A/G-specific adenine glycosylase [Brucella sp. 83/13]
gi|306407126|gb|EFM63341.1| A/G-specific adenine glycosylase [Brucella sp. NF 2653]
Length = 375
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 24 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFVERWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 84 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 143 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPAAKAQIRALMGQMTPPDRPGDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 203 AMMDLGATICTPRRPACALCPLNEGC 228
>gi|254718666|ref|ZP_05180477.1| A/G-specific adenine glycosylase [Brucella sp. 83/13]
Length = 358
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFVERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPAAKAQIRALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNEGC 211
>gi|20092809|ref|NP_618884.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918109|gb|AAM07364.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 256
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 125/222 (56%), Gaps = 1/222 (0%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
KKS + + ++ L ++P K L Y N L++A +LSAQSTD
Sbjct: 28 PKKSIPSEPLQEYEIPDNRHNFDSVWALLKAEYPDAKPSLNYSNPLELLIATVLSAQSTD 87
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V +N+ T++LF+ T + ++L+ I + G Y+ K++NI + + +++ F ++
Sbjct: 88 VQINRVTENLFKKYRTAEDYAGADIRELEIDIYSTGFYKNKAKNIKAAAQMIVERFGGEV 147
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
P+T++ L LPG+GRK AN++L+ AFG+ I VDTH+ R+S R+G P K+EQ L
Sbjct: 148 PKTMKELVTLPGVGRKTANIVLARAFGVIEGIAVDTHVKRVSRRLGFTRHSDPEKIEQDL 207
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + + + L+ HGR VC+ARKP+C C++ LC
Sbjct: 208 ITLARKEDLDSISMTLIYHGRKVCRARKPRCYVCVVKELCPS 249
>gi|163842775|ref|YP_001627179.1| A/G-specific adenine glycosylase [Brucella suis ATCC 23445]
gi|225627000|ref|ZP_03785039.1| A/G-specific adenine glycosylase [Brucella ceti str. Cudo]
gi|225852029|ref|YP_002732262.1| A/G-specific adenine glycosylase [Brucella melitensis ATCC 23457]
gi|254701296|ref|ZP_05163124.1| A/G-specific adenine glycosylase [Brucella suis bv. 5 str. 513]
gi|254707780|ref|ZP_05169608.1| A/G-specific adenine glycosylase [Brucella pinnipedialis
M163/99/10]
gi|254709636|ref|ZP_05171447.1| A/G-specific adenine glycosylase [Brucella pinnipedialis B2/94]
gi|256031129|ref|ZP_05444743.1| A/G-specific adenine glycosylase [Brucella pinnipedialis M292/94/1]
gi|256044206|ref|ZP_05447113.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256060626|ref|ZP_05450792.1| A/G-specific adenine glycosylase [Brucella neotomae 5K33]
gi|256113021|ref|ZP_05453918.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 3 str.
Ether]
gi|256159205|ref|ZP_05457016.1| A/G-specific adenine glycosylase [Brucella ceti M490/95/1]
gi|256254532|ref|ZP_05460068.1| A/G-specific adenine glycosylase [Brucella ceti B1/94]
gi|256368946|ref|YP_003106452.1| A/G-specific adenine glycosylase [Brucella microti CCM 4915]
gi|260168260|ref|ZP_05755071.1| A/G-specific adenine glycosylase [Brucella sp. F5/99]
gi|261221710|ref|ZP_05935991.1| A/G-specific adenine glycosylase [Brucella ceti B1/94]
gi|261324623|ref|ZP_05963820.1| A/G-specific adenine glycosylase [Brucella neotomae 5K33]
gi|261751838|ref|ZP_05995547.1| A/G-specific adenine glycosylase [Brucella suis bv. 5 str. 513]
gi|265988207|ref|ZP_06100764.1| A/G-specific adenine glycosylase [Brucella pinnipedialis M292/94/1]
gi|265990622|ref|ZP_06103179.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994454|ref|ZP_06107011.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 3 str.
Ether]
gi|265997673|ref|ZP_06110230.1| A/G-specific adenine glycosylase [Brucella ceti M490/95/1]
gi|294851868|ref|ZP_06792541.1| A/G-specific adenine glycosylase [Brucella sp. NVSL 07-0026]
gi|163673498|gb|ABY37609.1| A/G-specific adenine glycosylase [Brucella suis ATCC 23445]
gi|225618657|gb|EEH15700.1| A/G-specific adenine glycosylase [Brucella ceti str. Cudo]
gi|225640394|gb|ACO00308.1| A/G-specific adenine glycosylase [Brucella melitensis ATCC 23457]
gi|255999104|gb|ACU47503.1| A/G-specific adenine glycosylase [Brucella microti CCM 4915]
gi|260920294|gb|EEX86947.1| A/G-specific adenine glycosylase [Brucella ceti B1/94]
gi|261300603|gb|EEY04100.1| A/G-specific adenine glycosylase [Brucella neotomae 5K33]
gi|261741591|gb|EEY29517.1| A/G-specific adenine glycosylase [Brucella suis bv. 5 str. 513]
gi|262552141|gb|EEZ08131.1| A/G-specific adenine glycosylase [Brucella ceti M490/95/1]
gi|262765567|gb|EEZ11356.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 3 str.
Ether]
gi|263001406|gb|EEZ13981.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|264660404|gb|EEZ30665.1| A/G-specific adenine glycosylase [Brucella pinnipedialis M292/94/1]
gi|294820457|gb|EFG37456.1| A/G-specific adenine glycosylase [Brucella sp. NVSL 07-0026]
gi|326408523|gb|ADZ65588.1| A/G-specific adenine glycosylase [Brucella melitensis M28]
gi|326538240|gb|ADZ86455.1| A/G-specific adenine glycosylase [Brucella melitensis M5-90]
Length = 358
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|327191941|gb|EGE58923.1| A/G-specific adenine glycosylase protein [Rhizobium etli CNPAF512]
Length = 571
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 218 LLDWYDRHHRDLPWRVSPGMAARGVKPDPYRVWLSEVMLQQTTVQAVKPYFERFLARWPE 277
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P + GL LPGIG
Sbjct: 278 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVAQEHGGVFPDSEAGLKALPGIGDY 336
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++ + R+ P +
Sbjct: 337 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIETPLPAAKPLMKNKVARLTPADRPGDFAQ 396
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 397 AMMDLGATICTPKRPACSLCPFRVACQALK 426
>gi|259501844|ref|ZP_05744746.1| endonuclease III [Lactobacillus antri DSM 16041]
gi|259170169|gb|EEW54664.1| endonuclease III [Lactobacillus antri DSM 16041]
Length = 213
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 120/205 (58%), Gaps = 1/205 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ + + ++P L HF ++AV+LSAQSTD +VN+ T LFE
Sbjct: 1 MLSNAEIYQAIQVMRKEYPDAGTTLIADTHFHFLLAVILSAQSTDQSVNQLTPALFERFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ + A ++ YI+ +G+Y K++ +++ + L+ +F+ +PQTL+ LT LPG+GR
Sbjct: 61 LPQDLAAAEPADVEPYIKRLGLYHNKAKYLVNCARKLVTDFNGVVPQTLKELTSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ F IP VDTH+ R++ R+ + P K +E+ L+ +P +AH+
Sbjct: 121 KVADVVLAECFAIPAFPVDTHVSRVARRLAMVPPKASLLTIEKKLMEAVPRDKWLDAHHS 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ GRY C AR P+C C + +C
Sbjct: 181 MIFWGRYRCMARNPRCSDCPLLPMC 205
>gi|229083757|ref|ZP_04216077.1| hypothetical protein bcere0022_4230 [Bacillus cereus Rock3-44]
gi|228699561|gb|EEL52226.1| hypothetical protein bcere0022_4230 [Bacillus cereus Rock3-44]
Length = 364
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 91/211 (43%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEKFQHDLISWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++++ +G Y ++ N+ + + + K+P ++ + +L G+G
Sbjct: 71 ALASADDEEVLKAWEGLGYYS-RARNLHAAVKEVQEVYGGKVPNDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISKENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVRDHCRGYAE 220
>gi|163790099|ref|ZP_02184533.1| putative endonuclease III (DNA repair) [Carnobacterium sp. AT7]
gi|159874590|gb|EDP68660.1| putative endonuclease III (DNA repair) [Carnobacterium sp. AT7]
Length = 215
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 1/199 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ T + + + Y +P ++Y N F L++ V+LSAQ+TD +V K LFE
Sbjct: 2 SMLTKEAAQHVVYEIMKLYPDAVPTMHYQNPFQLLMVVILSAQATDESVAKVKDRLFERY 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
PQ + +++++YI+T+G+YR K++ I S+ L+ +FD ++P T + L L GIG
Sbjct: 62 PNPQAVSESSPEEIESYIKTVGLYRNKAKYIYKSSNQLLEQFDGEVPNTRKELQSLSGIG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K AN++L++AF VDTH+ R+ + TP ++E+ + IIP K+ AH
Sbjct: 122 PKSANILLNVAFNQEAFAVDTHVARVCKHHKIVAENATPKQIEERITEIIPAKYWGRAHQ 181
Query: 197 WLVLHGRYVCKARKPQCQS 215
++ GR +C R P+C
Sbjct: 182 SMISFGREICSPRNPKCHE 200
>gi|73668473|ref|YP_304488.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395635|gb|AAZ69908.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 204
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+++E+ +P + + + F +++ ++S ++ D A LFE TP++M
Sbjct: 2 DIDELMKRLFELYPEASND-GFTDPFFALISTVMSHRTRDDVTYPAASKLFERFSTPEEM 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +++ I+ +G YR K+ I +S +L+ ++ ++P +E L LPG+GRK AN
Sbjct: 61 VRADVSEIETLIKDVGFYRVKAGRIKEISRLLLEKYGGRVPDDMEALLELPGVGRKTANC 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L+ AF + VDTH+ RISNR+GL K P + E L +I P K+ + + LV G+
Sbjct: 121 VLAHAFLKDALAVDTHVHRISNRLGLVETKVPEETETELKKIFPQKYWRHVNLLLVKLGQ 180
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C+ P+C++C + ++C +I
Sbjct: 181 NTCRPISPRCKTCTLDDICPKI 202
>gi|306845121|ref|ZP_07477701.1| A/G-specific adenine glycosylase [Brucella sp. BO1]
gi|306274536|gb|EFM56331.1| A/G-specific adenine glycosylase [Brucella sp. BO1]
Length = 375
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 24 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFVERWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 84 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 143 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPAAKAQIRALMGQMTPPDRPGDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 203 AMMDLGATICTPRRPACALCPLNEGC 228
>gi|303231653|ref|ZP_07318376.1| A/G-specific adenine glycosylase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513602|gb|EFL55621.1| A/G-specific adenine glycosylase [Veillonella atypica
ACS-049-V-Sch6]
Length = 366
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + + + + V+ ++S Q+ + + + T + + E
Sbjct: 13 LLAWYDVNKRDLPWRDCGDPYKVWVSEVMSQQTRIEAMKPYYDNWMRLFPTLEDLAKATE 72
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + + +G Y ++ N+ ++N + +P + + L G+G A +LSMA
Sbjct: 73 DEVVHAWQGLGYYS-RARNLRLGVQDVVNNYGGVVPHNRKDMESLKGVGSYTAGAVLSMA 131
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+G P + VD ++ RI R+ + K + + +P + + L+ G
Sbjct: 132 YGEPEVAVDGNVLRIYARLYGIFDDILSTKGKKAITAIVEDTLPHDRPGDFNQALMDFGS 191
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC + P+C C I N C +
Sbjct: 192 AVCIPKTPRCGECPIVNTCHAYQ 214
>gi|220909544|ref|YP_002484855.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7425]
gi|219866155|gb|ACL46494.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7425]
Length = 386
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 9/224 (4%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNV 66
++ G +TP ++ ++ + L + + + + V+ ++ Q+ V
Sbjct: 19 RSSSALPGVDFTPAQILDLQRSLLHWYRQHGRSLPWRETSDPYAIWVSEIMLQQTQVQTV 78
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T + A ++++ + +G Y ++ N+ + ++ EF + P
Sbjct: 79 IPYYQRWLAALPTIATVAAAEQQQVLKLWQGLGYYS-RARNLHQAAQLIQQEFAGQFPSQ 137
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE----QSL 182
LE + +LPGIGR A ILS AF P +D ++ R+ R+ LA P K + Q
Sbjct: 138 LEAVLKLPGIGRTTAGGILSSAFAQPVAILDGNVKRVLARL-LALPVPPRKAKGFLWQWS 196
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
R++ + L+ G VC +KP C C SN C+ ++
Sbjct: 197 DRLLDRTQPREFNQALMDLGATVCVPKKPDCPLCPWSNHCQALQ 240
>gi|297531247|ref|YP_003672522.1| A/G-specific adenine glycosylase [Geobacillus sp. C56-T3]
gi|297254499|gb|ADI27945.1| A/G-specific adenine glycosylase [Geobacillus sp. C56-T3]
Length = 366
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 10 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 70 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 129 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNE 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 189 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 219
>gi|239618511|ref|YP_002941833.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
gi|239507342|gb|ACR80829.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
Length = 210
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 3/198 (1%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +P + + + ++V+ +LS ++ D N A+K LF + +
Sbjct: 9 VAAKIIELFPRIHQD---SDPYRVLVSTVLSQRTRDENTEVASKKLFSVYPDVFAIAKAK 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ L N I+ G+YR+K+E I+ +S I++ ++ K+P TLE LT+LPG+GRK AN++L++
Sbjct: 66 PEDLYNLIKAAGMYRQKAERIVEISKIIVETYNGKVPDTLEELTKLPGVGRKTANIVLNV 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+FG + VDTH+ RISNR+G K P + E L +I+P + + +V GR VCK
Sbjct: 126 SFGKAALAVDTHVHRISNRLGWIKTKQPEQSEFELQKILPEELWGPLNGSMVEFGRRVCK 185
Query: 208 ARKPQCQSCIISNLCKRI 225
PQC C I++ C+
Sbjct: 186 PVNPQCNECPINSCCRYF 203
>gi|182677741|ref|YP_001831887.1| A/G-specific adenine glycosylase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633624|gb|ACB94398.1| A/G-specific adenine glycosylase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 383
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + + +L + + + + ++ ++ Q+T V
Sbjct: 15 VSRALLAWYDAHRRDLPWRAKPGEQADPYAVWLSEIMLQQTTVTAVKPYYATFLGQWPRL 74
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + A + +G Y ++ N+ + + +++ P L LPGIG
Sbjct: 75 EDLAAAPLDAVLRQWAGLGYYS-RARNLHACAIMVMQRHGGVFPAEESLLRALPGIGAYT 133
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYW 197
A I ++A G + VD ++ R+ +R+ P + R+ P + +
Sbjct: 134 AAAIAAIAHGRRAVVVDGNVERVISRLFAIESPLPEAKAVIRAETDRLTPNERAGDFAQA 193
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+PQC C ++ C
Sbjct: 194 MMDLGSMICTPRQPQCLLCPLAAFC 218
>gi|261757724|ref|ZP_06001433.1| A/G-specific adenine glycosylase [Brucella sp. F5/99]
gi|261737708|gb|EEY25704.1| A/G-specific adenine glycosylase [Brucella sp. F5/99]
Length = 382
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 31 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 90
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 91 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 149
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 150 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPGDFAQ 209
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 210 AMMDLGATICTPRRPACALCPLNKGC 235
>gi|150020336|ref|YP_001305690.1| endonuclease III [Thermosipho melanesiensis BI429]
gi|149792857|gb|ABR30305.1| endonuclease III [Thermosipho melanesiensis BI429]
Length = 203
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
LEE+ +P E + F +++ +LS +S D N A LFE TPQ +L
Sbjct: 3 LEEVAKRIIKNFPRNHKE---KDPFKVLITTVLSQRSKDENTEIAANRLFEKYPTPQTLL 59
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+ L I+ G+YR+K++ II +S I++N+F K+P TLE L LPG+GRK AN++
Sbjct: 60 KAKEEDLYELIKPAGLYRQKAKRIIEISKIIVNKFSGKVPDTLEELLTLPGVGRKTANIV 119
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L ++F P + VDTH+ RISNR+G K PN+ E +L++++P + +V G+
Sbjct: 120 LYVSFSKPALAVDTHVHRISNRLGWCKTKNPNETEFALMKLLPKDLWGPINGSMVKFGKN 179
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC R P+C C I + CK
Sbjct: 180 VCLPRNPKCDICPIYDYCKW 199
>gi|307296244|ref|ZP_07576071.1| HhH-GPD family protein [Sphingobium chlorophenolicum L-1]
gi|306878046|gb|EFN09269.1| HhH-GPD family protein [Sphingobium chlorophenolicum L-1]
Length = 356
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 12/218 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ + +I + L + + + + ++ ++ Q+T V
Sbjct: 1 MRVEGNIPKIASDLLAHYDVHARRLPWRAPPGANAADPYRVWLSEVMLQQTTVAAVGPYF 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ + A + ++ +G Y ++ N+++ + + + P T +GL
Sbjct: 61 AKFTQRWPDVTALAAEEDAEVMAAWAGLGYYA-RARNLLACARAVAGDHGGVFPDTEDGL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIP 187
LPG+G A + ++AFG + VD ++ R+ R+ P ++ + I P
Sbjct: 120 RALPGVGAYTAAAVAAIAFGRRAVVVDANVERVVARLFAIATPLPAARPEIRAATDAITP 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C R P C C + C +
Sbjct: 180 DARAGDFAQAMMDLGATICTPRNPACGICPLRQDCAAV 217
>gi|17987725|ref|NP_540359.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
16M]
gi|260563565|ref|ZP_05834051.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
16M]
gi|261315266|ref|ZP_05954463.1| A/G-specific adenine glycosylase [Brucella pinnipedialis
M163/99/10]
gi|261317169|ref|ZP_05956366.1| A/G-specific adenine glycosylase [Brucella pinnipedialis B2/94]
gi|265999582|ref|ZP_05466999.2| A/G-specific adenine glycosylase [Brucella melitensis bv. 2 str.
63/9]
gi|17983444|gb|AAL52623.1| a/g-specific adenine glycosylase [Brucella melitensis bv. 1 str.
16M]
gi|260153581|gb|EEW88673.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 1 str.
16M]
gi|261296392|gb|EEX99888.1| A/G-specific adenine glycosylase [Brucella pinnipedialis B2/94]
gi|261304292|gb|EEY07789.1| A/G-specific adenine glycosylase [Brucella pinnipedialis
M163/99/10]
gi|263094798|gb|EEZ18536.1| A/G-specific adenine glycosylase [Brucella melitensis bv. 2 str.
63/9]
Length = 375
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 24 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 84 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 143 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPGDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 203 AMMDLGATICTPRRPACALCPLNKGC 228
>gi|228952026|ref|ZP_04114121.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228957922|ref|ZP_04119662.1| endonuclease III [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229043392|ref|ZP_04191109.1| endonuclease III [Bacillus cereus AH676]
gi|229069199|ref|ZP_04202490.1| endonuclease III [Bacillus cereus F65185]
gi|229078829|ref|ZP_04211382.1| endonuclease III [Bacillus cereus Rock4-2]
gi|229126960|ref|ZP_04255971.1| endonuclease III [Bacillus cereus BDRD-Cer4]
gi|229178054|ref|ZP_04305426.1| endonuclease III [Bacillus cereus 172560W]
gi|228605542|gb|EEK62991.1| endonuclease III [Bacillus cereus 172560W]
gi|228656560|gb|EEL12387.1| endonuclease III [Bacillus cereus BDRD-Cer4]
gi|228704511|gb|EEL56944.1| endonuclease III [Bacillus cereus Rock4-2]
gi|228713951|gb|EEL65835.1| endonuclease III [Bacillus cereus F65185]
gi|228725973|gb|EEL77213.1| endonuclease III [Bacillus cereus AH676]
gi|228801838|gb|EEM48715.1| endonuclease III [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228807558|gb|EEM54082.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 202
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N F L++AV LSAQ TDV VNK T++LF+ TP+ L++ ++L
Sbjct: 1 MADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEEL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Q IR+IG+YR K++NI L +L+++++ ++P + LT+LPG+GRK ANV++S+AFGI
Sbjct: 61 QQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPNDRDELTKLPGVGRKTANVVVSVAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R+S R+ + + +VE++L++ +P H+ ++ GRY CKA++
Sbjct: 121 PAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEWGVTHHRMIFFGRYHCKAQR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC+ C + +C+ K+
Sbjct: 181 PQCEECRLLEVCREGKK 197
>gi|228920357|ref|ZP_04083703.1| endonuclease III [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228839279|gb|EEM84574.1| endonuclease III [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 202
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N F L++AV LSAQ TDV VNK T++LF+ TP+ L++ ++L
Sbjct: 1 MADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEEL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Q IR+IG+YR K++NI L +L+++++ ++P + LT+LPG+GRK ANV++S+AFGI
Sbjct: 61 QQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPSDRDELTKLPGVGRKTANVVVSVAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R+S R+ + + +VE++L++ +P H+ ++ GRY CKA++
Sbjct: 121 PAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEWGVTHHRMIFFGRYHCKAQR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC+ C + +C+ K+
Sbjct: 181 PQCEECRLLEVCREGKK 197
>gi|154245120|ref|YP_001416078.1| A/G-specific adenine glycosylase [Xanthobacter autotrophicus Py2]
gi|154159205|gb|ABS66421.1| A/G-specific adenine glycosylase [Xanthobacter autotrophicus Py2]
Length = 355
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+T V +
Sbjct: 11 AALLAWYDRHRRRLPWRAEPGRRADPYHVFLSEIMLQQTTVKAVGPYFGAFLARWPSVSH 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +++ + +G Y ++ N+ + + +++ P L LPGIG A
Sbjct: 71 LADAPLEEVLSAWAGLGYYA-RARNLHACARAVVDRHGGAFPDAEAALLDLPGIGPYTAA 129
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLV 199
I ++AF P VD +I R+ +R+ P ++ + PP + ++
Sbjct: 130 AIAAIAFDRPASPVDGNIERVISRLYAIGEPLPGAKPAIKARAAALTPPDRPGDFAQAMM 189
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C + P C C C
Sbjct: 190 DLGATICTPKSPACSLCPWMEPC 212
>gi|225155029|ref|ZP_03723525.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
TAV2]
gi|224804199|gb|EEG22426.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
TAV2]
Length = 217
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 1/204 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + +P+P L + + +TL++AVLLSAQ TD VN T LF +AD
Sbjct: 1 MTRTEIAAYVSRRLAALYPTPPIPLEHRDPYTLLIAVLLSAQCTDKRVNLTTPALFALAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ M + ++ +R G+ +K++ I LSH+L+ + ++P+T E L LPG+G
Sbjct: 61 NPRDMARLTVAQIDAIVRPCGLAPRKAQAIRDLSHLLLEKHHGQVPRTFEELEELPGVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V++S AFG P VDTHI R++ R L P G + + E+ L P H
Sbjct: 121 KTASVVMSQAFGYPAFPVDTHIHRLAQRWSLTPLGASVQQTERDLKAAFPETEWNALHLR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNL 221
++ +GR C AR C I
Sbjct: 181 IIYYGREHCTARGCDGTVCEICRH 204
>gi|148558903|ref|YP_001258507.1| A/G-specific adenine glycosylase [Brucella ovis ATCC 25840]
gi|148370160|gb|ABQ60139.1| A/G-specific adenine glycosylase [Brucella ovis ATCC 25840]
Length = 358
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAENGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|157691592|ref|YP_001486054.1| adenine glycosylase [Bacillus pumilus SAFR-032]
gi|157680350|gb|ABV61494.1| adenine glycosylase [Bacillus pumilus SAFR-032]
Length = 366
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++ + + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LDRKDIAGFQHDLIDWYEKEQRTLPWRENQDPYRVWVSEVMLQQTRVDTVIPYFNRFMEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ + + ++ +P T E ++L G+
Sbjct: 68 FPTVKDLALADEEKVMKAWEGLGYYS-RVRNLQAAVKEVYESYEGVVPDTKEQFSKLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G + +LS+A+ P VD ++ R+ + +A KT N E ++ ++I +
Sbjct: 127 GPYTSGAVLSIAYNKPYPAVDGNVMRVISRILSIWDDIAKPKTRNIFEFAVDQLISREKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P C C ++ C +++
Sbjct: 187 SEFNQGLMELGALICTPTSPACLICPVNMHCSALEE 222
>gi|91975679|ref|YP_568338.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris BisB5]
gi|91682135|gb|ABE38437.1| A/G-specific DNA-adenine glycosylase [Rhodopseudomonas palustris
BisB5]
Length = 376
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+T V + + +
Sbjct: 34 AALLAWYDRHRRILPWRPPAGVPADPYAVWLSEIMLQQTTVRAVGPYFEKFMARWPSVKA 93
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G Y ++ N+ + + + + P T +GL LPG+G A
Sbjct: 94 LGEASLDDVLRMWAGLGYYS-RARNLHACAVAVTRDHGGAFPDTEQGLRALPGVGPYTAA 152
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG T+ VD +I R+ +R+ + P +++ ++ P+ ++ L+
Sbjct: 153 AIAAIAFGRQTMPVDGNIERVVSRLHAVEEELPKAKPRIQELAATLLGPERAGDSAQALM 212
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C +++ C
Sbjct: 213 DLGATICTPKKPACALCPLNDGC 235
>gi|229189728|ref|ZP_04316742.1| endonuclease III [Bacillus cereus ATCC 10876]
gi|228593777|gb|EEK51582.1| endonuclease III [Bacillus cereus ATCC 10876]
Length = 202
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 133/197 (67%), Gaps = 1/197 (0%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +P EL + N F L++AV LSAQ TDV VNK T++LF+ TP+ L++ ++L
Sbjct: 1 MADMYPEAHCELVHDNPFELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEEL 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Q IR+IG+YR K++NI L +L+++++ K+P+ + LT+LPG+GRK ANV++S+AFGI
Sbjct: 61 QQDIRSIGLYRNKAKNIQKLCQMLLDDYNGKVPEDRDELTKLPGVGRKTANVVVSVAFGI 120
Query: 152 PTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R+S R+ + + +VE++L++ +P H+ ++ GRY CKA++
Sbjct: 121 PAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEWGVTHHRMIFFGRYHCKAQR 180
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC+ C + +C+ K+
Sbjct: 181 PQCEECRLLEVCREGKK 197
>gi|194017928|ref|ZP_03056536.1| A/G-specific adenine glycosylase [Bacillus pumilus ATCC 7061]
gi|194010394|gb|EDW19968.1| A/G-specific adenine glycosylase [Bacillus pumilus ATCC 7061]
Length = 366
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 87/216 (40%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K++ + + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LDRKDIAGFQHDLINWYEKEQRTLPWRENQDPYRVWVSEVMLQQTRVDTVIPYFNRFMEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+K+ +G Y + N+ + + + +P T E ++L G+
Sbjct: 68 FPTVKDLALADEEKVMKAWEGLGYYS-RVRNLQAAVKEVYESYGGIVPDTKEQFSKLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G + +LS+A+ P VD ++ R+ + +A KT N E ++ ++I +
Sbjct: 127 GPYTSGAVLSIAYNKPYPAVDGNVMRVISRILSIWDDIAKPKTRNTFEFAVDQLISREKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P C C ++ C +++
Sbjct: 187 SEFNQGLMELGALICTPTSPACLICPVNMHCSALEE 222
>gi|15888141|ref|NP_353822.1| A/G-specific adenine glycosylase [Agrobacterium tumefaciens str.
C58]
gi|15155777|gb|AAK86607.1| A/G-specific adenine glycosylase [Agrobacterium tumefaciens str.
C58]
Length = 367
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EL + + + + ++ ++ Q+T V
Sbjct: 14 LLAWYDRHHRELPWRTSPAMAARGKRADPYHVWLSEVMLQQTTVQAVKPYFLKFLAAWPR 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N+ + + E P T EGL +LPGIG
Sbjct: 74 VDDLATAPVEDVMAAWAGLGYYA-RARNLKKCAEAVAREHGGVFPDTEEGLKQLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
+ + ++AF +D ++ R+ +R+ P ++ + + P + +
Sbjct: 133 TSAAVAAIAFNRQAAVMDGNVERVISRLFAIDAPLPGSKPAMKAKVAELTPAERPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C ++P C C + C
Sbjct: 193 AMMDLGATICTPKRPACALCPFNGAC 218
>gi|14591284|ref|NP_143362.1| endonuclease III [Pyrococcus horikoshii OT3]
gi|3257923|dbj|BAA30606.1| 222aa long hypothetical endonuclease III [Pyrococcus horikoshii
OT3]
Length = 222
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 122/211 (57%), Gaps = 5/211 (2%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +I + +P + + + ++ ++S ++ D ++ ++ LF+
Sbjct: 6 PLSERERALKIIKILKSTYP--RKNHVSGDPYKTLIRCIISQRNRDEVTDRVSEELFKRY 63
Query: 78 DTPQKMLAIGEKKLQNYIR--TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + + +++QN+++ +G++R K + I+ S I++ +++ ++P E L +LPG
Sbjct: 64 PTIESIASASVEEMQNFLKSLKVGLWRSKGKWIVETSRIILKKYNGRVPDKFEELIKLPG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNA 194
IGRK AN++L+ FGIP I VDTH++RIS R+GLA +P +VE+ L +IP +
Sbjct: 124 IGRKCANIVLAYGFGIPAIPVDTHVYRISRRLGLAPWDASPEEVEERLKSLIPREEWIYV 183
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ +V HG+ VCK KP+C C + LC +I
Sbjct: 184 NHAMVDHGKSVCKPIKPRCWECPLRGLCPKI 214
>gi|293569305|ref|ZP_06680603.1| A/G-specific adenine glycosylase [Enterococcus faecium E1071]
gi|291588011|gb|EFF19861.1| A/G-specific adenine glycosylase [Enterococcus faecium E1071]
Length = 392
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T KE +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDKETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD ++PQT E ++ L GI
Sbjct: 68 FPTIEELANAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGEMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II KH
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDEKHP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCETCPIQAFCLANKR 222
>gi|69248260|ref|ZP_00604694.1| A/G-specific adenine glycosylase MutY [Enterococcus faecium DO]
gi|257880211|ref|ZP_05659864.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,230,933]
gi|257883012|ref|ZP_05662665.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,502]
gi|257891405|ref|ZP_05671058.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,410]
gi|257893598|ref|ZP_05673251.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,408]
gi|258614399|ref|ZP_05712169.1| A/G-specific adenine glycosylase [Enterococcus faecium DO]
gi|260560491|ref|ZP_05832665.1| A/G-specific adenine glycosylase [Enterococcus faecium C68]
gi|261209008|ref|ZP_05923413.1| A/G-specific adenine glycosylase [Enterococcus faecium TC 6]
gi|289565180|ref|ZP_06445632.1| A/G-specific adenine glycosylase MutY [Enterococcus faecium
D344SRF]
gi|293563310|ref|ZP_06677760.1| A/G-specific adenine glycosylase [Enterococcus faecium E1162]
gi|294614978|ref|ZP_06694867.1| A/G-specific adenine glycosylase [Enterococcus faecium E1636]
gi|294619068|ref|ZP_06698563.1| A/G-specific adenine glycosylase [Enterococcus faecium E1679]
gi|294621467|ref|ZP_06700636.1| A/G-specific adenine glycosylase [Enterococcus faecium U0317]
gi|314939805|ref|ZP_07847025.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133a04]
gi|314943899|ref|ZP_07850625.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133C]
gi|314949996|ref|ZP_07853289.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0082]
gi|314953518|ref|ZP_07856430.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133A]
gi|314994280|ref|ZP_07859582.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133B]
gi|314995148|ref|ZP_07860264.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133a01]
gi|68194475|gb|EAN08974.1| A/G-specific adenine glycosylase MutY [Enterococcus faecium DO]
gi|257814439|gb|EEV43197.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,230,933]
gi|257818670|gb|EEV45998.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,502]
gi|257827765|gb|EEV54391.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,410]
gi|257829977|gb|EEV56584.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,408]
gi|260073493|gb|EEW61821.1| A/G-specific adenine glycosylase [Enterococcus faecium C68]
gi|260077047|gb|EEW64769.1| A/G-specific adenine glycosylase [Enterococcus faecium TC 6]
gi|289163001|gb|EFD10849.1| A/G-specific adenine glycosylase MutY [Enterococcus faecium
D344SRF]
gi|291592109|gb|EFF23729.1| A/G-specific adenine glycosylase [Enterococcus faecium E1636]
gi|291594729|gb|EFF26111.1| A/G-specific adenine glycosylase [Enterococcus faecium E1679]
gi|291598961|gb|EFF30009.1| A/G-specific adenine glycosylase [Enterococcus faecium U0317]
gi|291604762|gb|EFF34246.1| A/G-specific adenine glycosylase [Enterococcus faecium E1162]
gi|313590639|gb|EFR69484.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133a01]
gi|313591315|gb|EFR70160.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133B]
gi|313594441|gb|EFR73286.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133A]
gi|313597440|gb|EFR76285.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133C]
gi|313640945|gb|EFS05525.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0133a04]
gi|313643643|gb|EFS08223.1| A/G-specific adenine glycosylase [Enterococcus faecium TX0082]
Length = 392
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T KE +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDKETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD ++PQT E ++ L GI
Sbjct: 68 FPTIEELANAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGEMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II KH
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDEKHP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCETCPIQAFCLANKR 222
>gi|294497217|ref|YP_003560917.1| A/G-specific adenine glycosylase [Bacillus megaterium QM B1551]
gi|294347154|gb|ADE67483.1| A/G-specific adenine glycosylase [Bacillus megaterium QM B1551]
Length = 364
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 83/212 (39%), Gaps = 9/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + L + + + + V+ ++ Q+ V + T
Sbjct: 12 DIRAFQDDLISWFEQEQRILPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNNFISKFPTI 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E + +G Y ++ N+ + + ++ ++P T +++L G+G
Sbjct: 72 KDLAYANEDDVLKAWEGLGYYS-RARNLQTAVREVHEQYGGEVPNTPAEISKLKGVGPYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
ILS+A+G+P VD ++ R+ + +A KT E + II + +
Sbjct: 131 TGAILSIAYGVPQPAVDGNVMRVLSRILSVWDDIAKPKTRKLFEDIVHEIISKDNPSYFN 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC P C C + C+ ++
Sbjct: 191 QGMMELGAIVCTPTSPSCLLCPVREHCRAFEE 222
>gi|313679202|ref|YP_004056941.1| a/g-specific DNA-adenine glycosylase [Oceanithermus profundus DSM
14977]
gi|313151917|gb|ADR35768.1| A/G-specific DNA-adenine glycosylase [Oceanithermus profundus DSM
14977]
Length = 325
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + ++++ +L Q+ + E T + + A
Sbjct: 7 RALLAWYDAERRALPWRGTRDPYRILLSEVLLQQTRVEQALPYYRRFLERFPTLEALAAA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+ + + G Y + + + + P+ GL +LPG+G A + S
Sbjct: 67 DEEAVLAAWQGAGYYARARNLLRLAREVARAGW----PRDRAGLLQLPGVGPYTAAAVAS 122
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+AFG P VD ++ R+ R+ P + ++ + P + + L+ G VC
Sbjct: 123 IAFGEPVAAVDGNVRRVLARVHAEPEPGAAWLGRAAADWLEPARPGDWNQALMELGARVC 182
Query: 207 KARKPQCQSCIISNLCK 223
R P C +C ++ +C+
Sbjct: 183 TPRNPDCAACPLAGICR 199
>gi|16082555|ref|NP_394252.1| endonuclease III [Thermoplasma acidophilum DSM 1728]
Length = 217
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + I P+ + + + F +++ +LS ++ D ++A + L+E
Sbjct: 5 RSEEAVRTIIGRIREAVPAHR--FVFRDPFWMLITTVLSQRTKDETTDEAARSLYEKYRD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++ I +G +R KS ++ ++ I+ + ++ ++P +++ L LPG+G K
Sbjct: 63 IDGLADADPDEVGRIISKVGFWRVKSRKVVEIARIIRDRYNYRVPDSIDELVSLPGVGLK 122
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+L+ F P I VDTH+FRIS+RIG + +TP + + L RIIP Q + +V
Sbjct: 123 TAKVVLAEGFNRPAIAVDTHVFRISHRIGWSSARTPEETSEELERIIPVDLQVGFNPMMV 182
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G+ +C+ +P C C +S C+ ++
Sbjct: 183 EFGKAICRPVRPLCDRCPVSEYCRYYEE 210
>gi|163785187|ref|ZP_02179872.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159879544|gb|EDP73363.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 218
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+E ++ + ++P K + + F ++++ ++S ++ D KA+K L
Sbjct: 1 MQTQEFIKVLEILEKEFPKWKAPVVSLMAQQIKDPFKVLISTIISLRTKDEVTAKASKRL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A TP+++ + E+K+ I G Y+ K++ I +S I++ +++ K+P TLE L +
Sbjct: 61 FSVAKTPEEISKLSEEKIAELIYPAGFYKNKAKTIKDISKIILEKYNGKVPDTLEKLLKF 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++LS F P I VD H+ RISNR+G KTP K E +L+ +P K+
Sbjct: 121 KGVGRKTANLVLSEGFNKPAICVDIHVHRISNRLGFVKTKTPEKTEFALMEKLPEKYWNK 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +CK P C C + NLCK+
Sbjct: 181 INKLLVGFGQTICKPVSPYCSKCPVENLCKK 211
>gi|90420660|ref|ZP_01228566.1| endonuclease III [Aurantimonas manganoxydans SI85-9A1]
gi|90334951|gb|EAS48712.1| endonuclease III [Aurantimonas manganoxydans SI85-9A1]
Length = 265
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 76/224 (33%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP----SPKGELYYVNHFTLIVAVLLSAQS 61
++ G + +E +F + + P + KG + F +V+ +LSAQS
Sbjct: 33 RTRPVAGRMSDMAVLPEAAVETVFQRLAAEMPGRTATAKGPKDQPDPFRSLVSCVLSAQS 92
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
D N A + LF +A TPQ ML +GE+ + IR G+Y K+ N+ L L+
Sbjct: 93 LDRNTAAAAEALFAMATTPQAMLVLGEEAIARAIRPCGLYNMKARNLTRLCQALLQTHGG 152
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+PQ GL LPG+GRK A+++LS FG I VDTH+ R++NRIGL + +
Sbjct: 153 VVPQDRAGLMALPGVGRKCADIVLSFTFGQDVIAVDTHVHRVANRIGLTAARGADATADQ 212
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L P Q + H+WL+ G+ VC AR+P+C++C++++LC
Sbjct: 213 LAARAPDWAQGDGHFWLIQFGKAVCVARRPRCEACMLTDLCLWF 256
>gi|111225893|ref|YP_716687.1| endonuclease III [Frankia alni ACN14a]
gi|111153425|emb|CAJ65181.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Frankia alni ACN14a]
Length = 258
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 103/195 (52%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
L P + L++ N L+VA +LSAQ TD VN+ T +F + A +
Sbjct: 39 LLGEVHPDARIALHFDNALELLVATVLSAQCTDKKVNEVTPAVFARYRSAADYAAADRAE 98
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L+ +R G +R K+ ++I + L F ++P+ L+ LT LPG+GRK ANV+L AF
Sbjct: 99 LETLLRPTGFFRAKANSVIGIGAALTERFGGEVPRRLDELTTLPGVGRKTANVVLGHAFD 158
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ R++ R GL P +VE L +I + A ++ HGR C +R+
Sbjct: 159 TPGITVDTHVGRLARRFGLTGETDPVRVEADLAGLIERRDWTIASDRMIFHGRRFCHSRR 218
Query: 211 PQCQSCIISNLCKRI 225
P C +C ++ LC
Sbjct: 219 PACGACALARLCPSF 233
>gi|257885256|ref|ZP_05664909.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,501]
gi|257821108|gb|EEV48242.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,231,501]
Length = 392
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T KE +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDKETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD ++PQT E ++ L GI
Sbjct: 68 FPTIEELANAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGEMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II KH
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDEKHP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCETCPIQAFCLANKR 222
>gi|121602108|ref|YP_988733.1| A/G-specific adenine glycosylase [Bartonella bacilliformis KC583]
gi|120614285|gb|ABM44886.1| A/G-specific adenine glycosylase [Bartonella bacilliformis KC583]
Length = 350
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 16/217 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ EI + L + + + + ++ ++ Q+T V K
Sbjct: 2 MHEISSRLLSWYDKNHRHLPWRITPKEQMKGIHPDPYQVWLSEIMLQQTTVETVKPYFKK 61
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
++ + + + +G Y ++ N+ + + L+ ++ K PQ+++ L
Sbjct: 62 FLKLWPDLLSLSQASQDDIMKAWAGLGYYS-RARNLKNCADQLMRDYGGKFPQSMKILRS 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPK 189
LPGIG A I ++AF P VD +I RI R+ P ++++ + II
Sbjct: 121 LPGIGDYTAAAIAAIAFSQPVSVVDGNIERIITRLFAITAMLPKAKSEIKEKIQEIIAIN 180
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +CK R P C C + NLC+ K
Sbjct: 181 RPGDFAQAMMDLGAIICKPRNPSCLLCPLQNLCEATK 217
>gi|87198982|ref|YP_496239.1| A/G-specific DNA-adenine glycosylase [Novosphingobium
aromaticivorans DSM 12444]
gi|87134663|gb|ABD25405.1| A/G-specific DNA-adenine glycosylase [Novosphingobium
aromaticivorans DSM 12444]
Length = 359
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 81/213 (38%), Gaps = 13/213 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ I + + +L + + + + ++ ++ Q+T V + +
Sbjct: 14 QAIAPALLDWYDAHARKLPWRRLPGEARQDPYRVWLSEVMLQQTTVAAVGPYFEKFTRLW 73
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + + +G Y + + + P + +GL LPG+G
Sbjct: 74 PTVGDLAAADDGDVMAAWAGLGYYARARNLL--ACARAVAAMGGTFPDSEDGLRALPGLG 131
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNA 194
A + ++AFG + VD ++ R+ R+ P + + ++ P + +
Sbjct: 132 EYTAAAVAAIAFGRRAVVVDANVERVIARLFAIDEPLPAGKAAIRLAAGQVTPEERAGDF 191
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC AR P+C C + C+ + +
Sbjct: 192 AQAMMDLGATVCTARSPRCMLCPLREHCRALAE 224
>gi|284055514|pdb|3FSP|A Chain A, Muty Adenine Glycosylase Bound To A Transition State
Analog (1n) Paired With Dg In Duplexed Dna
gi|284055517|pdb|3FSQ|A Chain A, Muty Adenine Glycosylase Bound To A Transition State
Analog (1n) Paired With D(8-Oxog) In Duplexed Dna
Length = 369
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 13 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 73 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 132 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNE 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 192 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 222
>gi|90961668|ref|YP_535584.1| endonuclease III [Lactobacillus salivarius UCC118]
gi|90820862|gb|ABD99501.1| Endonuclease III [Lactobacillus salivarius UCC118]
Length = 213
Score = 118 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 121/210 (57%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ KE + +P+ L + + ++AV+LSAQ+TD VNK T LFE
Sbjct: 1 MLDSKETQYALQEMGKMFPNATTSLIADSDYHFLLAVILSAQTTDKAVNKVTPLLFERYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M K++ YI+TIG+Y+ K++ ++ S +L+ F++ +P+T + L L G+GR
Sbjct: 61 YPIDMANADPKEVAEYIKTIGLYKNKAKYLVECSKMLVENFNSVVPKTHKELMSLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ FG+P VDTH+ RIS R+ + P T + E+ L+ +P + +H+
Sbjct: 121 KTADVVLAERFGVPAFAVDTHVHRISKRLAIVPEDATVRETEKILMSKVPKEDWIKSHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ ++
Sbjct: 181 MIFWGRYQCMARAPKCETCPLLEICQEGQK 210
>gi|325954264|ref|YP_004237924.1| endonuclease III [Weeksella virosa DSM 16922]
gi|323436882|gb|ADX67346.1| endonuclease III [Weeksella virosa DSM 16922]
Length = 492
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ + +P+ L++ + FTL++AVLLSAQ+TD VN+ T LF A+
Sbjct: 2 MKKQERIDFLIQELEKLYPNLPIPLHHQDAFTLLIAVLLSAQTTDKKVNEVTPALFARAN 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
++M+ + ++++ YI+ IG+ K++NI LS +L+ ++D ++P T E L LPG+G
Sbjct: 62 NAKEMMQLEVEEIKEYIKQIGLSNTKAKNIRLLSEMLVEKYDGEVPSTFEQLEELPGVGH 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V+++ FGIP VDTHI R+ L GK + E+ RI P + H +
Sbjct: 122 KTASVVMAQWFGIPAFPVDTHIHRLMKLWKLTKGKNVEETERDAKRIFPREVWNKLHIQI 181
Query: 199 VLHGRYVCKAR 209
+++GR AR
Sbjct: 182 IMYGREYSPAR 192
>gi|311067343|ref|YP_003972266.1| YfhQ protein [Bacillus atrophaeus 1942]
gi|310867860|gb|ADP31335.1| YfhQ [Bacillus atrophaeus 1942]
Length = 364
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K+++ + + L + + + + V+ ++ Q+ V E
Sbjct: 8 LQQKDIDMFRDDLITWFEREQRILPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + E+K+ +G Y + N+ S + ++ +P T + L G+
Sbjct: 68 FPNVEALAEADEEKVLKAWEGLGYYS-RVRNLQSAVKEVQQQYGGTVPSTEKEFGGLKGV 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G +LS+A+ P VD ++ R+ + +A KT EQ++ I +
Sbjct: 127 GPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEQAVHAFISKEKP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C +
Sbjct: 187 SEFNQGLMELGAIICTPKSPSCLLCPVQKHCSAFAE 222
>gi|77917937|ref|YP_355752.1| A/G-specific adenine glycosylase [Pelobacter carbinolicus DSM 2380]
gi|77544020|gb|ABA87582.1| A/G-specific DNA-adenine glycosylase [Pelobacter carbinolicus DSM
2380]
Length = 352
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + + + + ++ ++ Q+ V + +
Sbjct: 8 ADTMNRCLLDWYGRCGRDLPWRRTRDPYRIWLSEIMLQQTGVTAVIPYYERFLAAFPSVA 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A +++ +G YR ++ + + +++E + P+T E + LPGIGR A
Sbjct: 68 ALAAAPLEQVLELWAGLGYYR-RARFLHEAACKVVSEHGGQFPETPEAIQALPGIGRSTA 126
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLL----RIIPPKHQYNAHY 196
I+S+AF +D ++ R+ R+ G + KVE+ L + P ++
Sbjct: 127 GAIVSIAFDRKAPILDGNVRRVLCRLLAISGDPRSSKVEKRLWQCADALTPEDRPHDYAQ 186
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VCK R+P CQ+C +S LC+
Sbjct: 187 AIMDLGATVCKPRRPDCQACPLSGLCQAF 215
>gi|332293322|ref|YP_004431931.1| DNA-(apurinic or apyrimidinic site) lyase [Krokinobacter diaphorus
4H-3-7-5]
gi|332171408|gb|AEE20663.1| DNA-(apurinic or apyrimidinic site) lyase [Krokinobacter diaphorus
4H-3-7-5]
Length = 268
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ +P L + + +TL++AVL+SAQSTDV VN+ T LFE+AD
Sbjct: 46 MTKQEKVDFTIKTLQELYPQIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFEVAD 105
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + + +++ I+ +G+ K++ I LSH+LI+++D +P ++E LT P +G
Sbjct: 106 NPYDMIKLTVEDIRDIIKPVGLSPMKAKGIHGLSHMLIDKYDGVVPASIEKLTEFPAVGH 165
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFGIP VDTHI R+ R G GK + E+ R+ P + H +
Sbjct: 166 KTASVVVSQAFGIPAFPVDTHIHRLMYRWGFTNGKNVVQTEKDAKRLFPEHVWNDLHLQI 225
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 226 IWYGRQYSPAR 236
>gi|118094461|ref|XP_422433.2| PREDICTED: similar to mutY homolog [Gallus gallus]
Length = 511
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 16/220 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKH 72
E++ + + + +L + + + V+ ++ Q+ V
Sbjct: 54 EIDALRGRLLAWYDKSRRDLPWRTLAAAELDADRRAYAVWVSEIMLQQTQVATVIDYYNR 113
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ T Q + A +++ +G Y + + ++ +
Sbjct: 114 WMQKWPTLQALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPRTAEDLQRL 173
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIP 187
LPG+GR A I S++FG T VD ++ R+ R+ T + L ++
Sbjct: 174 LPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLWDMANTLVD 233
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + L+ G VC + P C+ C + C ++
Sbjct: 234 RSRPGDFNQALMELGATVCTPKSPLCRECPVKEHCHAWRR 273
>gi|62289474|ref|YP_221267.1| A/G-specific adenine glycosylase [Brucella abortus bv. 1 str.
9-941]
gi|82699399|ref|YP_413973.1| hypothetical protein BAB1_0518 [Brucella melitensis biovar Abortus
2308]
gi|237814963|ref|ZP_04593961.1| A/G-specific adenine glycosylase [Brucella abortus str. 2308 A]
gi|254688785|ref|ZP_05152039.1| A/G-specific adenine glycosylase [Brucella abortus bv. 6 str. 870]
gi|254693268|ref|ZP_05155096.1| A/G-specific adenine glycosylase [Brucella abortus bv. 3 str.
Tulya]
gi|254696914|ref|ZP_05158742.1| A/G-specific adenine glycosylase [Brucella abortus bv. 2 str.
86/8/59]
gi|254729817|ref|ZP_05188395.1| A/G-specific adenine glycosylase [Brucella abortus bv. 4 str. 292]
gi|256257031|ref|ZP_05462567.1| A/G-specific adenine glycosylase [Brucella abortus bv. 9 str. C68]
gi|260754272|ref|ZP_05866620.1| A/G-specific adenine glycosylase [Brucella abortus bv. 6 str. 870]
gi|260883296|ref|ZP_05894910.1| A/G-specific adenine glycosylase [Brucella abortus bv. 9 str. C68]
gi|261213518|ref|ZP_05927799.1| A/G-specific adenine glycosylase [Brucella abortus bv. 3 str.
Tulya]
gi|62195606|gb|AAX73906.1| MutY, A/G-specific adenine glycosylase [Brucella abortus bv. 1 str.
9-941]
gi|82615500|emb|CAJ10474.1| HhH-GPD:Iron-sulfur cluster loop:Endonuclease III, FCL:A/G-specific
adenine glycosylase MutY [Brucella melitensis biovar
Abortus 2308]
gi|237789800|gb|EEP64010.1| A/G-specific adenine glycosylase [Brucella abortus str. 2308 A]
gi|260674380|gb|EEX61201.1| A/G-specific adenine glycosylase [Brucella abortus bv. 6 str. 870]
gi|260872824|gb|EEX79893.1| A/G-specific adenine glycosylase [Brucella abortus bv. 9 str. C68]
gi|260915125|gb|EEX81986.1| A/G-specific adenine glycosylase [Brucella abortus bv. 3 str.
Tulya]
Length = 358
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPSDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|257898992|ref|ZP_05678645.1| A/G-specific adenine glycosylase [Enterococcus faecium Com15]
gi|257836904|gb|EEV61978.1| A/G-specific adenine glycosylase [Enterococcus faecium Com15]
Length = 392
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T +E +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDEETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD K+PQT E ++ L GI
Sbjct: 68 FPTIEELATAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGKMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II +
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDETYP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCEACPIQAFCLANKR 222
>gi|146318468|ref|YP_001198180.1| EndoIII-related endonuclease [Streptococcus suis 05ZYH33]
gi|145689274|gb|ABP89780.1| Predicted EndoIII-related endonuclease [Streptococcus suis 05ZYH33]
Length = 227
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 1/200 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P K L + NHF L+ AVLLSAQ+TD VNKAT LF
Sbjct: 22 VLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQTTDAAVNKATPGLFAAFP 81
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ M A K ++ YI +G+YR K++ + + L+ + +PQT E L L G+GR
Sbjct: 82 TPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERHNGIVPQTREELEALAGVGR 141
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+ FGIP VDTH+ RI + TP + ++ ++ ++PP+ AH
Sbjct: 142 KTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPLETKKRVMEVLPPELWLPAHQP 201
Query: 198 LVLHGRYVCKARKPQCQSCI 217
++ GR VC + P+C+
Sbjct: 202 MIYLGREVCHPKNPECKKSP 221
>gi|120603736|ref|YP_968136.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris DP4]
gi|120563965|gb|ABM29709.1| A/G-specific DNA-adenine glycosylase [Desulfovibrio vulgaris DP4]
Length = 396
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 91/238 (38%), Gaps = 17/238 (7%)
Query: 3 SSKKSDS-YQGNSPLGCLYT------PKELEEIFYLFSLKWPSPKGELYYV---NHFTLI 52
+ + + + G++PL T E + + + + L + + +
Sbjct: 4 AMRSTPAGLAGSTPLRYTRTMHDNAPQHEYDAFAKALLDWFAAARRPLPWREHYTPYGVW 63
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
++ ++ Q+ E + E L +G YR + N+ + +
Sbjct: 64 ISEIMLQQTQMERGVDYYLRWMERFPDVASVATAPEADLLKAWEGLGYYR-RVRNLQAAA 122
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
+++ + + P + + LPGIG A I S+AF I VD ++ R+ +R+
Sbjct: 123 RVIMEQHEGIFPDLPDAIRALPGIGPYTAGAIASIAFNHDVIAVDGNVERVFSRVFDIDT 182
Query: 173 KTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + R +P + + L+ G VC+ +KP C +C ++ C+ +
Sbjct: 183 PVREKTAATRIRMLTARTLPKGRARDFNQALMELGALVCR-KKPDCTACPVARFCESL 239
>gi|46015547|pdb|1RRS|A Chain A, Muty Adenine Glycosylase In Complex With Dna Containing An
Abasic Site
gi|62738158|pdb|1VRL|A Chain A, Muty Adenine Glycosylase In Complex With Dna And Soaked
Adenine Free Base
Length = 369
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 13 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 73 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P V+ ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 132 GAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNE 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 192 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 222
>gi|293553263|ref|ZP_06673900.1| A/G-specific adenine glycosylase [Enterococcus faecium E1039]
gi|293570980|ref|ZP_06682023.1| A/G-specific adenine glycosylase [Enterococcus faecium E980]
gi|291602673|gb|EFF32888.1| A/G-specific adenine glycosylase [Enterococcus faecium E1039]
gi|291608906|gb|EFF38185.1| A/G-specific adenine glycosylase [Enterococcus faecium E980]
Length = 392
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T KE +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDKETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD K+PQT E ++ L GI
Sbjct: 68 FPTIEELANAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGKMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II KH
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDEKHP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCETCPIQAFCLANKR 222
>gi|307151293|ref|YP_003886677.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7822]
gi|306981521|gb|ADN13402.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 7822]
Length = 368
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 7/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ E+ L + +L + N + + V+ ++ Q+ V E T
Sbjct: 13 DIVELRQLLLSWYQKHHRDLPWRNQRNPYYIWVSEVMLQQTQVATVIPYFHRWLERFPTI 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G Y ++ N+ + ++I ++ P +L + LPGIGR
Sbjct: 73 DDLAQAELQPVLKAWEGLGYYA-RARNLHKAAKLIIKNYNGFFPNSLAEVLSLPGIGRTT 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
A ILS AF P +D ++ R+ +R+ P + ++ I+ P + + +
Sbjct: 132 AGGILSAAFNQPVSILDGNVKRVLSRLIALSVPPSQALPQLWALSDHILDPDNPRDFNQA 191
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC P+C C C+ +
Sbjct: 192 LMDLGATVCTRANPKCDQCPWQGYCQAYNK 221
>gi|218247825|ref|YP_002373196.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 8801]
gi|218168303|gb|ACK67040.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 8801]
Length = 352
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + EL + N + + V+ ++ Q+ V + Q +
Sbjct: 5 RSLLLWYQHQGRELPWRNIDDPYAIWVSEIMLQQTQVKTVIPYYQRWLAQFPNIQTLATS 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ + +G Y ++ N+ + I++ ++ P+ LE + +LPGIGR A ILS
Sbjct: 65 DLQTVLKAWEGLGYYT-RARNLYKTAQIILKDYRGIFPRELEKVVKLPGIGRTTAGGILS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQYNAHYWLVLHGR 203
AF P +D ++ R+ R+ ++ ++ P + + + L+ G
Sbjct: 124 SAFNQPISILDGNVKRVLARLVALSDPPAKAIQFLWDVSDSLLDPDNPRDFNQGLMDLGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C +P+C C + C+ +Q
Sbjct: 184 TICTRSQPKCLLCPWLSHCQAYQQ 207
>gi|222147827|ref|YP_002548784.1| A/G-specific adenine glycosylase [Agrobacterium vitis S4]
gi|221734816|gb|ACM35779.1| A/G-specific adenine glycosylase [Agrobacterium vitis S4]
Length = 388
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +L + + + + ++ ++ Q+T V
Sbjct: 31 DELLAWYDRHHRDLPWRISPPMAARGIRPDPYHIWLSEVMLQQTTVQAVKPYFLKFLARW 90
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A + + +G Y ++ N+ + + + P T +GL LPGIG
Sbjct: 91 PKVTDLAAAPTEDVMAAWAGLGYYA-RARNLKKCAEAVADLHGGVFPDTQDGLQSLPGIG 149
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
+ I ++AF +D ++ R+ +R+ P ++ + + P + +
Sbjct: 150 DYTSAAIAAIAFNRQAAVMDGNVERVISRLYAISDPLPGAKPAIKARVAALTPIERPGDF 209
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C + C +K
Sbjct: 210 AQAMMDLGATICTPKRPACSLCPFNAHCLALK 241
>gi|153007952|ref|YP_001369167.1| A/G-specific adenine glycosylase [Ochrobactrum anthropi ATCC 49188]
gi|151559840|gb|ABS13338.1| A/G-specific adenine glycosylase [Ochrobactrum anthropi ATCC 49188]
Length = 364
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 79/211 (37%), Gaps = 16/211 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L + + + + ++ ++ Q+T V E
Sbjct: 12 KLLRWYDRHHRVLPWRVSPSEQASGVKPDPYRVWLSEIMLQQTTVEAVKSYFVKFVERWP 71
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q M E + +G Y ++ N+ ++ + + D K P L LPGIG
Sbjct: 72 TVQAMAKASEDDILRAWAGLGYYS-RARNLKKCANAVALQHDGKFPDNAIALKELPGIGD 130
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAH 195
+ I ++AFG VD ++ R+ +R+ P ++ + ++ P +
Sbjct: 131 YTSAAIAAIAFGEAAAVVDGNVERVISRLYTIDTPLPAAKAEIRALMGQMTPIDRPGDFA 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C R+P C C +N C +K
Sbjct: 191 QAMMDLGATICTPRRPACAICPFNNDCSALK 221
>gi|317122871|ref|YP_004102874.1| A/G-specific adenine glycosylase [Thermaerobacter marianensis DSM
12885]
gi|315592851|gb|ADU52147.1| A/G-specific adenine glycosylase [Thermaerobacter marianensis DSM
12885]
Length = 429
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+E+ + + +L + + + ++V+ ++ Q+ V + +
Sbjct: 12 QEVRSRLIEWYDRHRRDLPWRRTRDPYAVLVSEVMLQQTRVDTVLPYYLRFLQRFPSAFH 71
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A E+++ + +G YR ++ + + +L+ F ++P E + LPG+G A
Sbjct: 72 LAAASEEEVLRLWQGLGYYR-RARQLQQAARVLVERFGGQVPPDPEAVRALPGVGDYTAG 130
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYW 197
+LS+AF +P VD + R+ +R+ + + R++ +
Sbjct: 131 AVLSIAFDLPVPAVDGNAQRVLSRVFGVDEPADRAAGRRRIAELARRLVDGPRPGALNQA 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC RKP C C ++ LC
Sbjct: 191 VMELGATVCTPRKPVCTQCPLAGLC 215
>gi|228963604|ref|ZP_04124757.1| hypothetical protein bthur0004_4830 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228796122|gb|EEM43577.1| hypothetical protein bthur0004_4830 [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 365
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILKKFDIEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISVEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|189023723|ref|YP_001934491.1| A/G-specific adenine glycosylase [Brucella abortus S19]
gi|260545774|ref|ZP_05821515.1| A/G-specific adenine glycosylase [Brucella abortus NCTC 8038]
gi|297247887|ref|ZP_06931605.1| A/G-specific adenine glycosylase [Brucella abortus bv. 5 str.
B3196]
gi|189019295|gb|ACD72017.1| A/G-specific adenine glycosylase [Brucella abortus S19]
gi|260097181|gb|EEW81056.1| A/G-specific adenine glycosylase [Brucella abortus NCTC 8038]
gi|297175056|gb|EFH34403.1| A/G-specific adenine glycosylase [Brucella abortus bv. 5 str.
B3196]
Length = 375
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 24 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 84 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 143 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPSDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 203 AMMDLGATICTPRRPACALCPLNKGC 228
>gi|260757491|ref|ZP_05869839.1| A/G-specific adenine glycosylase [Brucella abortus bv. 4 str. 292]
gi|260761315|ref|ZP_05873658.1| A/G-specific adenine glycosylase [Brucella abortus bv. 2 str.
86/8/59]
gi|260667809|gb|EEX54749.1| A/G-specific adenine glycosylase [Brucella abortus bv. 4 str. 292]
gi|260671747|gb|EEX58568.1| A/G-specific adenine glycosylase [Brucella abortus bv. 2 str.
86/8/59]
Length = 381
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 30 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 89
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 90 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 148
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 149 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQIRALMGQMTPPDRPSDFAQ 208
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 209 AMMDLGATICTPRRPACALCPLNKGC 234
>gi|301300783|ref|ZP_07206967.1| endonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851633|gb|EFK79333.1| endonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 213
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 69/210 (32%), Positives = 121/210 (57%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ KE + +P+ L + + ++AV+LSAQ+TD VNK T LF+
Sbjct: 1 MLDSKETQYALQEMGKMFPNATTSLIADSDYHFLLAVILSAQTTDKAVNKITPALFDRYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M K++ YI+TIG+Y+ K++ ++ S +L+ F++ +P+T + L L G+GR
Sbjct: 61 YPIDMAKADPKEVAKYIKTIGLYKNKAKYLVECSKMLVENFNSVVPKTHKELMSLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ FG+P VDTH+ RIS R+ + P T + E+ L+ +P + +H+
Sbjct: 121 KTADVVLAERFGVPAFAVDTHVHRISKRLAIVPEDATVRETERILMSKVPKEDWIKSHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ ++
Sbjct: 181 MIFWGRYQCMARAPKCETCPLLEICQEGQK 210
>gi|284161459|ref|YP_003400082.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
gi|284011456|gb|ADB57409.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
Length = 211
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ E + +P E+ + F ++V+ +LS ++ D +KA + LF + P+ +L
Sbjct: 6 IVETMEKIGRERKAPVYEMNLNDPFMVLVSAILSTRTKDEQTHKAVRKLFSVVKKPEDLL 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ E + I+ +G +R K++N+ L+ +L+N + K+P LE L +LPG+GRK AN++
Sbjct: 66 KLSEDDIDELIKPVGFHRTKAKNLKKLAEVLVNNYGGKVPDNLEELLKLPGVGRKVANIV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ G P I VDTH+ RI+NR+G+ K P + E+ L +I+P + V G+
Sbjct: 126 LA-HLGKPAIAVDTHVHRIANRLGVVRTKRPEETEKELKKIVPKDLWSRLNKAFVGFGQT 184
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VCK KP C+ C + C+ K
Sbjct: 185 VCKPLKPLCEECPFKSFCEYFK 206
>gi|254994834|ref|ZP_05277024.1| endonuclease III (nth) [Anaplasma marginale str. Mississippi]
Length = 224
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 109/204 (53%), Positives = 147/204 (72%), Gaps = 5/204 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+++ +F FS P P+ EL Y N FTL+VA++LSA++TDV+VNK T LF++AD+PQK
Sbjct: 2 KDVDLLFGRFSEDNPHPRIELRYRNEFTLLVAIVLSARTTDVSVNKITDKLFDVADSPQK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
MLA+GE L+ YI +IG+Y K++NII LS I++ ++ +PQ + LT LPG+GRK A+
Sbjct: 62 MLALGEDGLKGYIDSIGLYNSKAKNIIKLSEIIVKDYGGVVPQDFDALTDLPGVGRKSAS 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V L+ AFGIP I VDTH+FR+SNRIGL T VE SL +++P K + AH+WLVLHG
Sbjct: 122 VFLNSAFGIPAIAVDTHVFRVSNRIGLVKESTVLGVENSLNKVVPEKWKLYAHHWLVLHG 181
Query: 203 RYVCKARKPQCQS-----CIISNL 221
RYVCKAR P CQS C I+ +
Sbjct: 182 RYVCKARAPLCQSALLMTCAIAAI 205
>gi|257888571|ref|ZP_05668224.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,141,733]
gi|257824625|gb|EEV51557.1| A/G-specific adenine glycosylase [Enterococcus faecium 1,141,733]
Length = 392
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T +E +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDEETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD K+PQT E ++ L GI
Sbjct: 68 FPTIEELATAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGKMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II +
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDETYP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCEACPIQAFCLANKR 222
>gi|254712948|ref|ZP_05174759.1| A/G-specific adenine glycosylase [Brucella ceti M644/93/1]
gi|254716698|ref|ZP_05178509.1| A/G-specific adenine glycosylase [Brucella ceti M13/05/1]
gi|261218504|ref|ZP_05932785.1| A/G-specific adenine glycosylase [Brucella ceti M13/05/1]
gi|261320646|ref|ZP_05959843.1| A/G-specific adenine glycosylase [Brucella ceti M644/93/1]
gi|260923593|gb|EEX90161.1| A/G-specific adenine glycosylase [Brucella ceti M13/05/1]
gi|261293336|gb|EEX96832.1| A/G-specific adenine glycosylase [Brucella ceti M644/93/1]
Length = 358
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYTIDTPLPVAKAQIRALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|228937756|ref|ZP_04100389.1| hypothetical protein bthur0008_4340 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970635|ref|ZP_04131283.1| hypothetical protein bthur0003_4260 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977214|ref|ZP_04137613.1| hypothetical protein bthur0002_4310 [Bacillus thuringiensis Bt407]
gi|228782523|gb|EEM30702.1| hypothetical protein bthur0002_4310 [Bacillus thuringiensis Bt407]
gi|228789101|gb|EEM37032.1| hypothetical protein bthur0003_4260 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821908|gb|EEM67903.1| hypothetical protein bthur0008_4340 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938240|gb|AEA14136.1| A/G-specific adenine glycosylase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 365
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISKENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|294496431|ref|YP_003542924.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
gi|292667430|gb|ADE37279.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
Length = 206
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ EEIF +P + F ++++ +LS ++ D A++ LF+ TP +M
Sbjct: 2 DTEEIFDRLKPLYPHEYFSTE-RDPFYILISTVLSQRTRDEVTEVASRRLFDQYSTPVQM 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +K++ I+ +G YR K+ I +S ILI+E+D+++P ++ L +LPG+GRK AN
Sbjct: 61 VEADVEKIEILIKDVGFYRVKAGRIKEISQILIDEYDSQVPASMVELLKLPGVGRKTANC 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS AF I VDTH+ RISNR+GL TP++ E L + +P + + V G+
Sbjct: 121 VLSYAFLEKAIAVDTHVHRISNRLGLVDTVTPDQTEIELQKQVPVSYWREVNELFVQFGK 180
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VCK P C+ C I +LC + ++
Sbjct: 181 TVCKPLSPACEVCAIEDLCAKKEK 204
>gi|319784677|ref|YP_004144153.1| A/G-specific adenine glycosylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170565|gb|ADV14103.1| A/G-specific adenine glycosylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 401
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 17/213 (7%)
Query: 28 IFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
I + EL + + + + ++ ++ Q+T V + E
Sbjct: 42 IASRLLGWYDVHHRELPWRITPREHARGVRPDPYRIWLSEVMLQQTTVEAVKAYFRIFVE 101
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + A + + +G Y + + L+ + P T GL LPG
Sbjct: 102 KWPDVEALAATPAEDVMKAWAGLGYYSRAR--NLKACADLVAARGGRFPDTETGLRELPG 159
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQY 192
IG + I ++AF P VD ++ R+ +R+ ++ + R++P
Sbjct: 160 IGAYTSAAITAIAFDRPAAVVDGNVERVISRLFSITTPLSEAKPEIRAHVERMVPGIRPG 219
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C R+P+C C + C +
Sbjct: 220 DFAQAMMDLGATICTPRRPRCMLCPLREDCDAV 252
>gi|317153627|ref|YP_004121675.1| A/G-specific adenine glycosylase [Desulfovibrio aespoeensis Aspo-2]
gi|316943878|gb|ADU62929.1| A/G-specific adenine glycosylase [Desulfovibrio aespoeensis Aspo-2]
Length = 369
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 10/199 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + N + + ++ +++ Q+ V Q + E
Sbjct: 10 LLDWYDANGRDLPWRREPNPYRVWISEIMAQQTQLDRVVGYFDRWMARYPDLQSLALARE 69
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ NI+ + +L + P + LPG+G A + S+A
Sbjct: 70 EDVLKLWEGLGYYS-RARNILKSASVLAHAHGCVFPSDPIAIRALPGVGAYTAGAVASIA 128
Query: 149 FGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+ VD ++ R+ R +A VE+++ +IP + + L+ G
Sbjct: 129 FGLCEPAVDANVLRVFARLLDLDAPVAETGVRQTVERTVRALIPEDRPGDFNQALMELGA 188
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A++P+C C + C
Sbjct: 189 LVC-AKRPRCGECPVRAHC 206
>gi|227550546|ref|ZP_03980595.1| A/G-specific adenine glycosylase [Enterococcus faecium TX1330]
gi|293378743|ref|ZP_06624901.1| A/G-specific adenine glycosylase [Enterococcus faecium PC4.1]
gi|227180447|gb|EEI61419.1| A/G-specific adenine glycosylase [Enterococcus faecium TX1330]
gi|292642671|gb|EFF60823.1| A/G-specific adenine glycosylase [Enterococcus faecium PC4.1]
Length = 392
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T +E +E F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WTDEETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISEIMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD K+PQT E ++ L GI
Sbjct: 68 FPTIEELATAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGKMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II +
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDETYP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCEACPIQAFCLANKR 222
>gi|262383458|ref|ZP_06076594.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_33B]
gi|262294356|gb|EEY82288.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_33B]
Length = 365
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 87/217 (40%), Gaps = 9/217 (4%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + EI + + + K EL + + + + ++ ++ Q+ V +
Sbjct: 5 AVMLQYERELEISRILVEWYETYKRELPWRETRDPYIIWISEIILQQTRVVQGLEYFLRF 64
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
E + A E ++ Y + +G Y ++ N+ + + ++ F+ P+ + + L
Sbjct: 65 TERFPDVASLAAAEEDEVLKYWQGLGYYS-RARNLHAAAKSIMERFNGVFPENYKEVLSL 123
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
GIG A I+S A+ P VD +++R+ +R+ + + I+ P
Sbjct: 124 KGIGEYTAAAIVSFAWNQPCPVVDGNVYRVLSRLFAVDTPIDTTKGKKQFAELAGMILDP 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+ + ++ G C + P C C + + C
Sbjct: 184 KNAGTHNQAIMELGALQCVPQNPDCGVCPLKDKCMAF 220
>gi|268612274|pdb|3G0Q|A Chain A, Crystal Structure Of Muty Bound To Its Inhibitor Dna
Length = 352
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 2 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 62 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 121 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNE 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 181 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 211
>gi|12227244|emb|CAC21721.1| endonuclease-like protein [Staphylococcus aureus]
Length = 220
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTL-IVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + K+ E+ + + +P + EL + N + ++ VN+ T LF+
Sbjct: 1 MVSKKKALEMIDVIANMFPDAECELKHDNPVRIKLLLYYCQRNVQTFLVNRVTTELFKKY 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ LA+ +++L N IR+IG+YR K++NI L LI++F+ +IPQT + L L G+G
Sbjct: 61 KTPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFNGEIPQTHKELESLAGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHY 196
RK ANV++S+AF P++ VDTH+ R+S R+G+ +VE L +IP +H+
Sbjct: 121 RKTANVVMSVAFDEPSLAVDTHVERVSKRLGINRWKDNVRQVEDRLCSVIPRDRWNRSHH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GRY C ARKP+C C + C+ ++
Sbjct: 181 QLIFFGRYHCLARKPKCDICPLLEDCREGQK 211
>gi|298294361|ref|YP_003696300.1| A/G-specific adenine glycosylase [Starkeya novella DSM 506]
gi|296930872|gb|ADH91681.1| A/G-specific adenine glycosylase [Starkeya novella DSM 506]
Length = 359
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 11/206 (5%)
Query: 30 YLFSLKWPSPKGELYYVN-------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + ++ ++ Q+T V V + +
Sbjct: 22 EALLGWYDRHRRRLPWRAEAGKREAPYRVFLSEIMLQQTTVVTVRPYYAAFLKRWPDVEA 81
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A +++ + +G Y ++ N+ + + ++ + P L LPGIG A
Sbjct: 82 LAAAPLEEVLSAWAGLGYYA-RARNLHACAKAVVARHGGRFPADEAALLDLPGIGPYTAA 140
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLV 199
I S+AF VD + R+ R+ P K+ L ++P + + ++
Sbjct: 141 AIASIAFDRRAAPVDGNWERVVARLFAVDEPLPKARAKLRALALTLLPDEGYGDFAQAMM 200
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G +C RKP C C C
Sbjct: 201 DLGATICTPRKPACALCPWRPDCAGY 226
>gi|257060855|ref|YP_003138743.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 8802]
gi|256591021|gb|ACV01908.1| A/G-specific adenine glycosylase [Cyanothece sp. PCC 8802]
Length = 352
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 7/204 (3%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + EL + N + + V+ ++ Q+ V + Q +
Sbjct: 5 RSLLLWYQHQGRELPWRNIDDPYAIWVSEIMLQQTQVKTVIPYYQRWLAQFPNIQTLATS 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ + +G Y ++ N+ + I++ ++ P+ LE + +LPGIGR A ILS
Sbjct: 65 DLQTVLKAWEGLGYYT-RARNLYKTAQIILKDYRGIFPRELEKVVKLPGIGRTTAGGILS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQYNAHYWLVLHGR 203
AF P +D ++ R+ R+ ++ ++ P + + + L+ G
Sbjct: 124 SAFNQPISILDGNVKRVLARLVALSDPPAKAIQFLWDVSDSLLDPDNPRDFNQGLMDLGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C +P+C C + C+ +Q
Sbjct: 184 TICTRSQPKCLLCPWLSHCQAYQQ 207
>gi|295134199|ref|YP_003584875.1| endonuclease III [Zunongwangia profunda SM-A87]
gi|294982214|gb|ADF52679.1| endonuclease III [Zunongwangia profunda SM-A87]
Length = 222
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 111/191 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++ + +P L + + +TL++AVLLSAQSTDV VN+ T LFE+AD
Sbjct: 1 MDKQQKVQFVIDTLQHIYPEIPIPLDHKDPYTLLIAVLLSAQSTDVKVNQITPLLFEVAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQKM+ + ++++ I+ G+ KS+ I LS IL+ +++ ++P E L LP +G
Sbjct: 61 TPQKMVKLTIEEIREIIKPCGLSPMKSKGIHGLSEILLEKYNGQVPADFEALESLPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AF +P VDTHI R+ R L+ GK+ + E+ R+ P H +
Sbjct: 121 KTASVVMSQAFNVPAFPVDTHIHRLMYRWNLSNGKSVAQTEKDAKRLFPKDLWNELHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGRQYSPAR 191
>gi|91773087|ref|YP_565779.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanococcoides burtonii DSM 6242]
gi|91712102|gb|ABE52029.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 204
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+EEI +P ++ + + ++++ +LS ++ D T+ LF + DTP KM
Sbjct: 4 VEEIISRLKKLYPKGYFQIN-RDPYYILISTVLSQRTRDEVTIPTTQKLFSVFDTPPKMA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++Q IR +G YR KS +I +S +L++E+D +P + L +LPG+GRK AN +
Sbjct: 63 NADADEIQELIRNVGFYRVKSHRLIEISRMLLDEYDGIVPDDINELVKLPGVGRKTANCV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L+ AF I VDTH+ RISNR+GL TP + E L +++ + + + +VL G+
Sbjct: 123 LTYAFDKDAIAVDTHVHRISNRMGLVKTTTPEETEIELGKVVEKEMWKDINGLMVLFGKS 182
Query: 205 VCKARKPQCQSCIISNLCKRI 225
C+ P+C CI++++C ++
Sbjct: 183 TCRPVSPKCDECIMNDICPKL 203
>gi|253577618|ref|ZP_04854928.1| A/G-specific adenine glycosylase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251842988|gb|EES71026.1| A/G-specific adenine glycosylase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 231
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 10/213 (4%)
Query: 19 LYTPKELEEIFYL-FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ +E F + K +L + + + + V+ ++ Q+ V +
Sbjct: 1 MRGNRETRVFFSTELLSWYERSKRDLPWRRHRDPYYIWVSEIMLQQTRVDTVIPYFQRFI 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E T + + E+++ +G Y ++ N+ + + ++ +P T ++ L
Sbjct: 61 ERFPTIRDLAEAPEEEVLKCWEGLGYYS-RARNLQAAAKQVMERHGGIVPDTKAEVSALK 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK 189
G+G ILS+AF P VD ++ R+ +R L +E+ +IP
Sbjct: 120 GVGPYTTGAILSIAFNRPEPAVDGNVMRVLSRYFLIEEDVAKAGTRTLMEELAAELIPEG 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC + PQC C + C
Sbjct: 180 RASDFNQALMELGALVCTPKSPQCLICPVMARC 212
>gi|300024385|ref|YP_003756996.1| A/G-specific adenine glycosylase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526206|gb|ADJ24675.1| A/G-specific adenine glycosylase [Hyphomicrobium denitrificans ATCC
51888]
Length = 370
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 87/232 (37%), Gaps = 19/232 (8%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIV 53
M + +K+ P G + + + +L + + + + +
Sbjct: 1 MGAPQKTQKQLPLRPAGPDT--------VAALLRWYEAERRDLPWRYGPRKKADPYRVWL 52
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+ ++ Q+T V + + A +++ +G Y ++ N+ + +
Sbjct: 53 SEIMLQQTTVKAVIPYFQKFVARWPNVAALAAAQLEEVLQQWAGLGYYS-RARNLKACAD 111
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
++ +FD P+T L LPGIG A I ++AFG VD +I R+ +R+
Sbjct: 112 AVVRDFDGVFPRTEVELRELPGIGPYTAAAIAAIAFGEKATPVDGNIERVVSRLFAVQQP 171
Query: 174 TP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P ++ + P + + ++ G +C + P C C + C
Sbjct: 172 LPAAKTEIRNLAATLTPARRAGDFAQAMMDLGAEICTPKNPSCLVCPVQPDC 223
>gi|261418791|ref|YP_003252473.1| A/G-specific adenine glycosylase [Geobacillus sp. Y412MC61]
gi|319765607|ref|YP_004131108.1| A/G-specific adenine glycosylase [Geobacillus sp. Y412MC52]
gi|261375248|gb|ACX77991.1| A/G-specific adenine glycosylase [Geobacillus sp. Y412MC61]
gi|317110473|gb|ADU92965.1| A/G-specific adenine glycosylase [Geobacillus sp. Y412MC52]
Length = 366
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 10 ARKFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 70 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 129 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNE 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 189 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 219
>gi|268323381|emb|CBH36969.1| putative endonuclease [uncultured archaeon]
Length = 213
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 24 ELEEIFYLFSLKWPSPKGEL----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++E++ + ++ L + + +++ LLS ++ D +A+K LF +A T
Sbjct: 2 DIEKVLQILEERYQDQISALRAISNIRDPYLTLISCLLSLRTKDEVTARASKRLFALAKT 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ML ++ ++ I +G YR+K+E I+++SH L+ +D+K+P E L +L G+GRK
Sbjct: 62 PADMLQHKKEDIERAIYPVGFYRRKAEQILAISHTLVANYDSKVPAEREELLKLKGVGRK 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN++++MA+ P I VDTH+ RISNR+GL K P + E +L + + +H + LV
Sbjct: 122 TANIVITMAYNKPGIAVDTHVHRISNRLGLVATKDPYQTELALQKALAKQHWKVLNELLV 181
Query: 200 LHGRYVCKARKPQCQSCIISNLCK 223
LHG+ +C P+C C I+ C+
Sbjct: 182 LHGQTICTPISPKCSICPITKYCE 205
>gi|228472910|ref|ZP_04057667.1| base excision DNA repair protein, HhH-GPD family [Capnocytophaga
gingivalis ATCC 33624]
gi|228275492|gb|EEK14269.1| base excision DNA repair protein, HhH-GPD family [Capnocytophaga
gingivalis ATCC 33624]
Length = 211
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 106/192 (55%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++L I +P P L + + +TL++AVLLSAQ TD VN+ T LF AD
Sbjct: 1 MNKKEKLHFITETLEKLYPDPPIPLDHKDPYTLLIAVLLSAQCTDARVNQITPLLFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + ++++Q IR +G+ KS I LSHILI+++ ++PQ+ E L LP +G
Sbjct: 61 NPYDMIKLTQEEIQEIIRPVGLSPMKSHGIYHLSHILIDKYGGEVPQSFEALEALPSVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R ++ G T + E+ + P H +
Sbjct: 121 KTASVVMSTAFGVPAFPVDTHIHRMLERWEISNGSTVVQSEKDAKKFFPKSKWNKLHLQI 180
Query: 199 VLHGRYVCKARK 210
+ + R AR
Sbjct: 181 IYYARAYSPARN 192
>gi|323341780|ref|ZP_08082013.1| endonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464205|gb|EFY09398.1| endonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 206
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EI + ++P+ K +L Y N F L++AV LSAQ+TDV VNK T LFE TP +
Sbjct: 3 VAEIIEILDAEFPNAKSDLNYRNPFELLIAVTLSAQTTDVAVNKVTPALFERYPTPYSLS 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
K +++Y++TIG+YR K++ I++ + +L+++F+ ++P+T L +LPG+GRK ANV+
Sbjct: 63 QADVKDVESYLKTIGLYRNKAKYIVACASMLVDDFEGEVPRTRTQLMKLPGVGRKTANVV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
L+ F +P I VDTH+ R++ R+ LA VE+ L+R IP + AH+ L+L GR
Sbjct: 123 LAEGFKLPAIAVDTHVERVAKRLKLAKPNDTVEDVERKLMRKIPREDWARAHHLLLLFGR 182
Query: 204 YVCKARK 210
Y AR
Sbjct: 183 YHSTARN 189
>gi|84489308|ref|YP_447540.1| putative endonuclease III [Methanosphaera stadtmanae DSM 3091]
gi|84372627|gb|ABC56897.1| putative endonuclease III [Methanosphaera stadtmanae DSM 3091]
Length = 219
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
YT E++ I + + + +++ +LS ++ D N +KAT++LF + T
Sbjct: 10 YTVDEIKFIVDKLEEIF--TRRTFLEQTPYEVLIRTILSQRTRDENTDKATENLFNVYHT 67
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+++ + N +R G Y K+ I +S+IL+ E+D +P TLE L +LPG+GRK
Sbjct: 68 MEEIADAPVDDIANLVRQAGFYNVKAARIKEVSNILLEEYDGVVPDTLEELLKLPGVGRK 127
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN +L F I VD H+ RISNR+GL P E+ L I+P ++ + +V
Sbjct: 128 TANCVLVFGFQKDAIPVDVHVHRISNRLGLVHTDKPEDTEEVLREIVPQEYWLPINDLMV 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
G+ +CK PQ C ++LC+ K
Sbjct: 188 QFGQNICKPINPQHIECPFTDLCQLYK 214
>gi|257875476|ref|ZP_05655129.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC20]
gi|257809642|gb|EEV38462.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus EC20]
Length = 383
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WDEEKIKTFQEAFLTWYHKEKRNLPWRATNDPYAIWISEIMLQQTRVETVIGYFYRFMEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + A E+KL +G Y ++ N+ + + ++ EFD ++PQ++E + L GI
Sbjct: 68 FPTIQDLAAAEEQKLLKVWEGLGYYS-RARNLKAAAQQIVAEFDGEMPQSIEEIRSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A I S+AFG+P +D ++ R+ +R+ ++++ II P
Sbjct: 127 GPYTAGAIGSIAFGLPEPAIDGNVMRVVSRLFCIEADIAKASSRRPFDEAMRTIISPDEP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P+C+ C IS C +
Sbjct: 187 GEFNQALMDLGSRICTPTTPKCEECPISQYCLAYAE 222
>gi|85860977|ref|YP_463179.1| a/g-specific DNA glycosylase [Syntrophus aciditrophicus SB]
gi|85724068|gb|ABC79011.1| a/g-specific DNA glycosylase [Syntrophus aciditrophicus SB]
Length = 373
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 85/212 (40%), Gaps = 9/212 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I L + + K L + + + + ++ ++ Q+ V + E
Sbjct: 19 EQNAQRIATLLTAWYEKNKRLLPWRSTSDPYAIWLSEIMLQQTQVEAVIPYYRRFLEQFP 78
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T +++ + + +G Y ++ ++ + + +++ + P L LPGIG
Sbjct: 79 TIEELARAPLEAVLKVWEKMGYYS-RARHLHATARLILESHGGRFPANPVDLMALPGIGS 137
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYN 193
+ ILS+AFG VD ++ R+ +R+ + +++P +
Sbjct: 138 YTSGAILSIAFGKSVPAVDGNVKRVLSRLFFVDSPVDLTSTRRLLSALAEKLVPARQPGR 197
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ G +C+ + P C C + ++C
Sbjct: 198 FNQALMELGAVLCRPKTPLCSDCPLQSICLAY 229
>gi|311232570|gb|ADP85424.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris RCH1]
Length = 392
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 90/237 (37%), Gaps = 17/237 (7%)
Query: 4 SKKSDS-YQGNSPLGCLYT------PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIV 53
+ + + G++PL T E + + + + L + + + +
Sbjct: 1 MRSTPAGLAGSTPLRYTRTMHDNAPQHEYDAFAKALLDWFAAARRPLPWREHYTPYGVWI 60
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+ ++ Q+ E + E L +G YR + N+ + +
Sbjct: 61 SEIMLQQTQMERGVDYYLRWMERFPDVASVATAPEADLLKAWEGLGYYR-RVRNLQAAAR 119
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+++ + D P + + LPGIG A I S+AF I VD ++ R+ +R+
Sbjct: 120 VIMEQHDGIFPDLPDAIRALPGIGPYTAGAIASIAFNHDVIAVDGNVERVFSRVFDIDTP 179
Query: 174 TPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + R +P + + L+ G VC+ +KP C +C ++ C+ +
Sbjct: 180 VREKTAATRIRMLTARTLPKGRARDFNQALMELGALVCR-KKPDCTACPVARFCESL 235
>gi|46015544|pdb|1RRQ|A Chain A, Muty Adenine Glycosylase In Complex With Dna Containing An
A:oxog Pair
Length = 369
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 13 AREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 73 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P V+ ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 132 GAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNE 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 192 ALIELGALVCTPRRPSCLLCPVQAYCQAFAE 222
>gi|126724762|ref|ZP_01740605.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium
HTCC2150]
gi|126705926|gb|EBA05016.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium
HTCC2150]
Length = 353
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 13/208 (6%)
Query: 28 IFYLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
I + +L + N + + ++ ++ Q+T V +
Sbjct: 10 ISDDLLAWYDKNARDLPWRVPPNSGHHANPYAIWLSEVMLQQTTVATVKAYFLKFRSLWP 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + + +G Y ++ N++ + ++ ++ + + P TL+ L LPGIG
Sbjct: 70 TVQDLAAANDADVMAAWAGLGYYA-RARNLLKCARVVTDDHNGQFPNTLDELLALPGIGP 128
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAH 195
A I S+AF VD ++ R+ R+ P + + P +
Sbjct: 129 YTAAAISSIAFDNVATVVDGNVERVMARVFAHTEPLPKAKKTLTRLAANCTPSNRPGDYA 188
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ G +C R P+C C I N CK
Sbjct: 189 QAVMDLGATICTPRNPKCDICHIQNHCK 216
>gi|226355019|ref|YP_002784759.1| A/G-specific adenine glycosylase [Deinococcus deserti VCD115]
gi|226317009|gb|ACO45005.1| putative A/G-specific adenine glycosylase [Deinococcus deserti
VCD115]
Length = 353
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + +L + + + + ++ +L Q+ + T Q +
Sbjct: 22 LLAWFDAAGRDLPWRAGVEGRRDPYRVWISEVLLQQTQVARGLTYYDRFLQAFPTVQALA 81
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E + G Y + + + + P T G LPG+G A +
Sbjct: 82 LASEADVLKAWEGCGYYARARNLHRAARQVASDGRF---PDTYAGWRALPGVGPYTAAAV 138
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+AFG D ++ R+ R+ + V+ ++ + + L+ G
Sbjct: 139 TSLAFGEARAVNDGNVRRVLARLYAQAAPSETWVQAQADALLDSQRPGAWNEALMDLGAT 198
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C R P+C C +S C +
Sbjct: 199 ICTPRSPRCSDCPVSKYCCAFAE 221
>gi|158422080|ref|YP_001523372.1| A/G-specific adenine glycosylase [Azorhizobium caulinodans ORS 571]
gi|158328969|dbj|BAF86454.1| A/G-specific adenine glycosylase [Azorhizobium caulinodans ORS 571]
Length = 373
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 23/230 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAV 55
++K+ +P + + L + + + + ++
Sbjct: 17 ATKRQAPRSSTAPAPS------------ALLAWYDRHRRRLPWRAEAGRTADPYHVFLSE 64
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
++ Q+T V T + + +++ + +G Y ++ N+ + + +
Sbjct: 65 IMLQQTTVKAVGPYFTDFLRRWPTVRHLAEAPLEEVLSAWAGLGYYA-RARNLHACAKAV 123
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ P L LPGIG A I ++AF + VD +I R+ +R+ P
Sbjct: 124 VARHGGHFPADEAALLDLPGIGPYTAAAISAIAFDLKASPVDGNIERVVSRLYAVDEPLP 183
Query: 176 N---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+++ + P + + ++ G +C R P C C C
Sbjct: 184 KSKPRIKALAAALTPERRPGDFAQAMMDLGATICTPRSPACPLCPWMEPC 233
>gi|294101338|ref|YP_003553196.1| A/G-specific adenine glycosylase [Aminobacterium colombiense DSM
12261]
gi|293616318|gb|ADE56472.1| A/G-specific adenine glycosylase [Aminobacterium colombiense DSM
12261]
Length = 361
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + + K L + N + + ++ ++ Q+ V H E ++
Sbjct: 2 ISKILLEWFYCHKRNLPWRHSYNPYEVWISEIMLQQTQIDRVIPFFNHWMERFPNLAELT 61
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ +G Y ++ NI+ + L++ + +P L +LPGIG A I
Sbjct: 62 EASEEEILKLWEGLGYYS-RARNILKAAKQLVHMGYSTVPPDEAVLRKLPGIGAYTAGAI 120
Query: 145 LSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
LS+A+ +P VD ++ R+ R + + G + + +L +P ++ + + ++
Sbjct: 121 LSIAYNLPFPAVDGNVRRVFARLFNIDMPVISGMGLDLLNNYVLSTLPSENARDFNQSVM 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC R P+C C + C+ ++
Sbjct: 181 ELGALVCIPRSPRCPLCPLQKFCQAFQE 208
>gi|197104044|ref|YP_002129421.1| A/G-specific adenine glycosylase [Phenylobacterium zucineum HLK1]
gi|196477464|gb|ACG76992.1| A/G-specific adenine glycosylase [Phenylobacterium zucineum HLK1]
Length = 349
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 83/209 (39%), Gaps = 16/209 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T + T
Sbjct: 11 LLAWYDQNARDLPWRVGPADRAAGVRADPYRVWLSEVMLQQTTVPHATPYFLKFTARWPT 70
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++++ +G Y ++ N+++ + + N+ P T GL +LPG+G
Sbjct: 71 VSDLAAAPDEEVMAAWAGLGYYA-RARNLLACARAVANDHGGVFPDTEAGLLKLPGLGPY 129
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF P VD ++ R+ +R+ P ++++ ++ +
Sbjct: 130 TAAAVAAIAFDRPANVVDGNVERVVSRLFAVEQPLPAAKPELKRLAAALVAEDRPGDWAQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G +C+ + P C C +++ C
Sbjct: 190 ALMDLGATICRPKAPLCDRCPLADHCAAF 218
>gi|15807276|ref|NP_296006.1| A/G-specific adenine glycosylase [Deinococcus radiodurans R1]
gi|6460092|gb|AAF11831.1|AE002060_10 A/G-specific adenine glycosylase [Deinococcus radiodurans R1]
gi|16588988|gb|AAL26976.1| A/G-specific adenine glycosylase [Deinococcus radiodurans R1]
Length = 363
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 16/225 (7%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQS 61
S G +P E+ + + +L + + + + VA +L Q+
Sbjct: 6 SASGPAPFSP-----EVGALRRDLLGWFDRAGRDLPWRLGDEGRRDPYRVWVAEILLQQT 60
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
+ E T Q + A + + G Y + + + I F
Sbjct: 61 QVARGLGYYERFLEAFPTVQALAAAPQDAVLKAWEGCGYYARARNLHRAAAIIDEQGF-- 118
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
PQ G LPG+G A + S+A G P D ++ R+ +R+ + V++
Sbjct: 119 --PQDYAGWLALPGVGPYTAAAVSSLALGEPRAVNDGNVRRVLSRLRAEAHPSDKWVQEQ 176
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
R++ P + ++ G +C + P C C +S C +
Sbjct: 177 ADRLLDPARPGAWNEAVMDLGATICVPKSPACDRCPVSAHCAAYQ 221
>gi|261404713|ref|YP_003240954.1| A/G-specific adenine glycosylase [Paenibacillus sp. Y412MC10]
gi|261281176|gb|ACX63147.1| A/G-specific adenine glycosylase [Paenibacillus sp. Y412MC10]
Length = 382
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 9/214 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + + + + V+ ++ Q+ V E
Sbjct: 1 MHNTEHKRYFSQELLDWYEINKRDLPWRRHRDPYYIWVSEIMLQQTRVDTVIPYFHRFIE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E + +G Y ++ N+ + + + ++D +P + ++ L G
Sbjct: 61 RFPTIQSLADAPEDDVLKCWEGLGYYS-RARNLQAAARQVTEQYDGVMPSGKDEVSGLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IG + I S+AF IP VD ++ R+ +R L K+E +L ++P
Sbjct: 120 IGPYTSGAIRSIAFNIPAAAVDGNVMRVLSRYFLIEEDIMKVKTRTKMEDLVLTLVPDGR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ G +C + P+C C + C
Sbjct: 180 ASDFTQALMELGALICTPKSPKCLVCPVMEHCSA 213
>gi|229159607|ref|ZP_04287621.1| hypothetical protein bcere0009_4130 [Bacillus cereus R309803]
gi|228623909|gb|EEK80721.1| hypothetical protein bcere0009_4130 [Bacillus cereus R309803]
Length = 365
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILNKFNIEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + G++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANAGDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKEIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|196250626|ref|ZP_03149315.1| A/G-specific adenine glycosylase [Geobacillus sp. G11MC16]
gi|196209845|gb|EDY04615.1| A/G-specific adenine glycosylase [Geobacillus sp. G11MC16]
Length = 368
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 12 AREFQRDLLDWFARERRDLPWRQDRDPYKVWVSEVMLQQTRVETVIPYFEKFIRQFPTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + ++L G+G
Sbjct: 72 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKERYGGKVPDNPDEFSKLKGVGPYTV 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L EQ + I+ + +
Sbjct: 131 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKASTRKRFEQIVREIMAYEQPGAFNE 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 191 ALIELGALVCTPRRPSCLLCPVQAHCRAFAE 221
>gi|56963081|ref|YP_174808.1| A/G-specific adenine DNA glycosylase [Bacillus clausii KSM-K16]
gi|56909320|dbj|BAD63847.1| A/G-specific adenine DNA glycosylase [Bacillus clausii KSM-K16]
Length = 385
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K EL + + + + V+ ++ Q+ V + + +
Sbjct: 41 RQLIEWYQAHKRELPWRESNDPYHIWVSEIMLQQTRVDTVIPYYEQFMRKFPEMEDLAYA 100
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ +G Y + N+ + ++ + + +P T + + +L G+G A ILS
Sbjct: 101 EEEEILKVWEGLGYYS-RVRNLQAAVREVVEHYGSVVPDTRKEIEQLKGVGPYTAGAILS 159
Query: 147 MAFGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+A+ VD ++ R + +T K E L +I + + L+
Sbjct: 160 IAYAKAEPAVDGNVMRVLSRVFCMEDDIGKPQTRKKHEAILYELIDKSDPSSFNQGLMEL 219
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC P C C + C ++
Sbjct: 220 GALVCTPTSPGCLLCPVRTQCLAYER 245
>gi|56418998|ref|YP_146316.1| adenine glycosylase [Geobacillus kaustophilus HTA426]
gi|56378840|dbj|BAD74748.1| adenine glycosylase [Geobacillus kaustophilus HTA426]
Length = 366
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 10 AREFQRDLLDWFARERRDLPWRKGRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLE 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + +RL G+G
Sbjct: 70 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTV 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L A T + EQ + I+ ++ +
Sbjct: 129 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNE 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 189 ALIELGALVCTPRRPSCLLCPVQVYCQAFAE 219
>gi|328958613|ref|YP_004375999.1| endonuclease III [Carnobacterium sp. 17-4]
gi|328674937|gb|AEB30983.1| endonuclease III [Carnobacterium sp. 17-4]
Length = 218
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + + + Y +P + Y N F L++ V+LSAQ+TDV+V K LFE
Sbjct: 1 MLTKEAAQHVIYEIMKLYPDAVPMMRYQNPFQLLMVVILSAQATDVSVAKVKDQLFERYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ ++ +++++YI+T+G+YR K++ I S L+ FD ++P T + L L GIG
Sbjct: 61 NPQAVIESSPEEIESYIKTVGLYRNKAKYIYKSSCQLLEIFDGEVPNTRKELQSLAGIGP 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L++AF VDTH+ RI + TP ++E+ + IIP K+ AH
Sbjct: 121 KSANILLNVAFNQDAFAVDTHVERICKHHKIVEENATPKQIEERVTEIIPAKYWGRAHQS 180
Query: 198 LVLHGRYVCKARKPQCQS 215
++ G+ +C R +C
Sbjct: 181 MISFGKEICTPRNMKCHD 198
>gi|299134659|ref|ZP_07027851.1| A/G-specific adenine glycosylase [Afipia sp. 1NLS2]
gi|298590469|gb|EFI50672.1| A/G-specific adenine glycosylase [Afipia sp. 1NLS2]
Length = 349
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + + L + + + + ++ ++ Q+T V +
Sbjct: 5 ELLLRWYDRHRRLLPWRALPGETPDPYRVWLSEIMLQQTTVKAVGPYFLKFIDRWPNVTH 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M A + +G Y ++ N+ + + + E P + EGL LPGIG A
Sbjct: 65 MAAASLDDVLRMWAGLGYYS-RARNLYACAVAVAREHGGAFPDSEEGLRELPGIGPYTAA 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG T+ VD +I R+ +R+ + P ++++ ++ ++ L+
Sbjct: 124 AIAAIAFGRQTMPVDGNIERVVSRLYAVEDELPKAKPEIQRLATTLLGTSRAGDSAQALM 183
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C +++ C
Sbjct: 184 DLGATICTPKKPACALCPLNDNC 206
>gi|161618466|ref|YP_001592353.1| A/G-specific adenine glycosylase [Brucella canis ATCC 23365]
gi|161335277|gb|ABX61582.1| A/G-specific adenine glycosylase [Brucella canis ATCC 23365]
Length = 358
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILHAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQICALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|319898540|ref|YP_004158633.1| A/G-specific adenine glycosylase MutY [Bartonella clarridgeiae 73]
gi|319402504|emb|CBI76047.1| A/G-specific adenine glycosylase MutY [Bartonella clarridgeiae 73]
Length = 352
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
EI L + L + + + + ++ ++ Q+T V K
Sbjct: 3 EISSLLLSWYDKNYRHLPWRMSPQKQIKGIYPDPYQIWLSEVMLQQTTVETVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + ++ + +G Y ++ N+ + + L+ K PQ+++ L LP
Sbjct: 63 KLWPNLFSLSQASQEDIMKAWAGLGYYS-RARNLKNCATQLVKNHGGKFPQSVKILRTLP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I ++AFG P VD ++ R+ R+ P ++++ I +
Sbjct: 122 GIGDYTAAAIAAIAFGYPVAVVDGNVERVITRLFAITSVLPKAKSEIKEKTQEITDVQRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + ++CK IK
Sbjct: 182 GDFAQAMMDLGATICTPRKPSCLLCPLQSVCKAIK 216
>gi|325107164|ref|YP_004268232.1| A/G-specific adenine glycosylase [Planctomyces brasiliensis DSM
5305]
gi|324967432|gb|ADY58210.1| A/G-specific adenine glycosylase [Planctomyces brasiliensis DSM
5305]
Length = 408
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
Y+ +L+++ + L + + + + ++ ++ Q+T V E
Sbjct: 6 YSSSQLQQLRKRLRDWYGRNHRLLPWRETRDPYRIWLSEIMLQQTTVAAVVPYFDRFLER 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + A + + +G Y ++ NI + +++ FD + P E L +LPGI
Sbjct: 66 FPTVHDLAAGDVEDVLRLWEGLGYYS-RARNIHKAAREVVDSFDGQFPSAPEELVQLPGI 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
GR A I S AF +P V+ + R+ L + K+ ++P K
Sbjct: 125 GRYTAGAIASFAFELPAPIVEANTQRLYARLLGWDQPLDKSASQKKLWSFAEHLVPDKQP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G +C P+C+ C +S C
Sbjct: 185 GLFNQALMDLGSQICTPVDPKCKLCPLSRFC 215
>gi|228919383|ref|ZP_04082751.1| hypothetical protein bthur0011_4100 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840256|gb|EEM85529.1| hypothetical protein bthur0011_4100 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 365
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISTENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|258405019|ref|YP_003197761.1| A/G-specific adenine glycosylase [Desulfohalobium retbaense DSM
5692]
gi|257797246|gb|ACV68183.1| A/G-specific adenine glycosylase [Desulfohalobium retbaense DSM
5692]
Length = 373
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P E + + + +L + + + ++ ++ Q+ + E
Sbjct: 5 PDTSREFQDQLLEWFAAHQRDLPWRRTYAPYAVWISEIMLQQTQMDRAVGYFQRWMERFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A E ++ Y +G Y ++ NI + L+ E D P+T + L LPGIG
Sbjct: 65 DIASVAAASEDEILTYWEGLGYYS-RARNIHKAAQTLVREHDGVFPRTRKALLALPGIGP 123
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A ILS+ FG VD ++ RI R+ K + + ++PP
Sbjct: 124 YTAGAILSIGFGQDEPAVDANVERILARLTDIDTPVKTKPAQEAIHTAARDLLPPGRCRE 183
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC+AR P+C +C ++ C+ +
Sbjct: 184 FNQALMELGALVCRARAPRCPNCPVAPFCEARR 216
>gi|300725773|ref|ZP_07059243.1| endonuclease III [Prevotella bryantii B14]
gi|299776946|gb|EFI73486.1| endonuclease III [Prevotella bryantii B14]
Length = 209
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 2/200 (1%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ F + P EL + + F LIVA LLSAQ TD +NK T LF M
Sbjct: 1 MLDYFEQRQPEVTTELNFGSAFQLIVATLLSAQCTDERINKVTPALFAKYPDAHAMAQAT 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+ L YIR++ K++++++++ ++ N+F +IP L +LPG+GRK ANV+ ++
Sbjct: 61 EEDLLEYIRSVSYPNSKAKHLVAMAKMIENDFRGEIPDNTADLVKLPGVGRKTANVLQAV 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
F PT+ VDTH++R+S+R+GL P TP KVE+ L++ IP + AH+WL+LHGRYV
Sbjct: 121 WFNKPTLAVDTHVYRVSHRLGLVPKTANTPLKVEEYLMKHIPEEKITRAHHWLLLHGRYV 180
Query: 206 CKARKPQCQSCIISNLCKRI 225
C + +P+C+ C + C ++
Sbjct: 181 CNSARPKCEKCDFESFCPKL 200
>gi|205372625|ref|ZP_03225436.1| adenine glycosylase [Bacillus coahuilensis m4-4]
Length = 366
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + + + + V+ ++ Q+ V E T +
Sbjct: 14 IESFQQDLIGWFTEEMRDLPWRKDQDPYKVWVSEIMLQQTRVDTVIPYFNRFIEQFPTIE 73
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+K+ +G Y + N+ + + + +P T E +++L G+G
Sbjct: 74 ALATADEEKVLKAWEGLGYYS-RVRNLQAAVQEVHETYGGVVPNTPEEISKLKGVGPYTT 132
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ + +A + EQ++ +I K+ +
Sbjct: 133 GAVLSIAYGVPEPAVDGNVMRVISRVLSIWDDIAKPSSRKIFEQAIRELISHKNPSYFNQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC P C C + C +
Sbjct: 193 ALMELGALVCTPTSPSCLLCPVREHCHAFHE 223
>gi|86748195|ref|YP_484691.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris HaA2]
gi|86571223|gb|ABD05780.1| A/G-specific DNA-adenine glycosylase [Rhodopseudomonas palustris
HaA2]
Length = 357
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + L + + + + ++ ++ Q+T V + +
Sbjct: 15 AALLVWYDRHRRVLPWRPPAGVAADPYAVWLSEIMLQQTTVRAVGPYFEKFMARWPSVTA 74
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G Y ++ N+ + + + + + P T +GL LPG+G A
Sbjct: 75 LGQASLDDVLRMWAGLGYYS-RARNLHACAVAVATQHGGRFPDTEDGLRALPGVGPYTAA 133
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG T+ VD +I R+ +R+ + P +++ ++ P ++ L+
Sbjct: 134 AIAAIAFGRQTMPVDGNIERVVSRLYAVEDEMPKAKPRIQELARTLLGPSRAGDSAQALM 193
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C I + C ++
Sbjct: 194 DLGATICTPKKPACALCPIDDDCAARRR 221
>gi|49474013|ref|YP_032055.1| A/G-specific adenine glycosylase [Bartonella quintana str.
Toulouse]
gi|49239516|emb|CAF25873.1| A/G-specific adenine glycosylase [Bartonella quintana str.
Toulouse]
Length = 368
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 86/217 (39%), Gaps = 16/217 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ EI + L + + + + ++ ++ Q+T V K
Sbjct: 17 MHEISSRLLSWYDQKHRHLPWRITPEEQRQGIRPDPYRVWLSEIMLQQTTVEAVKPYFKK 76
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
++ + + + +G Y ++ N+ + + L+ + + PQ+++ L
Sbjct: 77 FLKLWPDLSSLAKASQDDIMKAWAGLGYYS-RARNLKNCAQQLVETYAGQFPQSVKALRT 135
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPK 189
LPGIG A + ++AF P +D+++ R+ R+ P ++++ +I
Sbjct: 136 LPGIGDYTAAALAAIAFNHPVAVIDSNVERVVTRLFAITSVLPKAKAEIKEKTQKITSFN 195
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + + CK K
Sbjct: 196 RPGDFAQAMMDLGATICTPRKPSCLLCPLQSFCKAEK 232
>gi|326383086|ref|ZP_08204775.1| HhH-GPD family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198222|gb|EGD55407.1| HhH-GPD family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 288
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 9/204 (4%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + L + + ++++ ++ Q+ V + E P M A
Sbjct: 4 QILLDWFARARRPLPWREPGISGWQILISEIMLQQTPVARVVGPWQTWVERWPVPSAMAA 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + +L E D+ +P ++ L LPGIG A +
Sbjct: 64 ETTGEVVRAWGKLGYPRRAMR-LHECARVLAAEHDDAVPDDVDTLLGLPGIGDYTARAVA 122
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKH-QYNAHYWLVLH 201
A+G VDT++ R+ R + N ++ L+ +++P L+
Sbjct: 123 CFAYGQSVPVVDTNVRRVIARAVHGTQQPGNPSKRDLVDARQLLPDDETAPEFSAALMEL 182
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G VC AR P C +C + + C+ +
Sbjct: 183 GALVCTARSPLCDACPLVDTCRWV 206
>gi|27377610|ref|NP_769139.1| A/G-specific adenine glycosylase [Bradyrhizobium japonicum USDA
110]
gi|27350755|dbj|BAC47764.1| A/G-specific adenine glycosylase [Bradyrhizobium japonicum USDA
110]
Length = 431
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 17/231 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVA 54
+S K + + P+ L + + L + + + + ++
Sbjct: 60 MSPKSALKAKSEPSQ-----PETASRPLALL-AWYDRHRRHLPWRAASGEASDPYRVWLS 113
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++ Q+T V + + + + +G Y ++ N+ + +
Sbjct: 114 EIMLQQTTVKAVGPYFEKFVARWPDVTALGQASQDDVLRMWAGLGYYS-RARNLHACAVA 172
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+ E P T E L LPGIG A I ++AF T+ VD +I R+ +R+ +
Sbjct: 173 VTREHGGVFPDTEERLRALPGIGPYTAAAIAAIAFDRRTMPVDGNIERVVSRLFAVEEEL 232
Query: 175 PNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P ++Q ++ ++ L+ G +C +KP C C +++ C
Sbjct: 233 PQSKPLIQQLAATLLADARAGDSAQALMDLGSSICTPKKPACSLCPLNDDC 283
>gi|225873619|ref|YP_002755078.1| A/G-specific adenine glycosylase, putative [Acidobacterium
capsulatum ATCC 51196]
gi|225791316|gb|ACO31406.1| A/G-specific adenine glycosylase, putative [Acidobacterium
capsulatum ATCC 51196]
Length = 354
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E+ S + +L + + + + V+ ++ Q+ V + + T
Sbjct: 4 EIASFQRDISAWYRQNARDLPWRRTRDPYAIWVSEIMLQQTRVAAVMEYYQRFMGQFPTI 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + E+ + +G YR ++ + +HI++ E K+P T L +LPGIG
Sbjct: 64 EALASAPEESVLALWSGLGYYR-RARMMHHAAHIVVAEHGGKMPATAAQLRKLPGIGDYT 122
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-------SNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
+ + S++F P +D ++ R+ G + ++ + ++ + +
Sbjct: 123 SAAVASISFDEPVPVIDGNVERVLLRLRGEPAVKGHPDAPGLSDLKAAAQELLDTEQPGD 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G VC R P C C + C+
Sbjct: 183 FNQAMMELGATVCLPRAPLCAECPVRAYCR 212
>gi|23501394|ref|NP_697521.1| A/G-specific adenine glycosylase [Brucella suis 1330]
gi|254703841|ref|ZP_05165669.1| A/G-specific adenine glycosylase [Brucella suis bv. 3 str. 686]
gi|261754493|ref|ZP_05998202.1| A/G-specific adenine glycosylase [Brucella suis bv. 3 str. 686]
gi|23347290|gb|AAN29436.1| A/G-specific adenine glycosylase [Brucella suis 1330]
gi|261744246|gb|EEY32172.1| A/G-specific adenine glycosylase [Brucella suis bv. 3 str. 686]
Length = 358
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 7 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 67 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 126 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQICALMGQMTPPDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 186 AMMDLGATICTPRRPACALCPLNKGC 211
>gi|47567289|ref|ZP_00238003.1| A/G-specific adenine glycosylase [Bacillus cereus G9241]
gi|47556132|gb|EAL14469.1| A/G-specific adenine glycosylase [Bacillus cereus G9241]
Length = 365
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|75759497|ref|ZP_00739588.1| A/G-specific adenine DNA glycosylase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218895577|ref|YP_002443988.1| A/G-specific adenine glycosylase [Bacillus cereus G9842]
gi|228906262|ref|ZP_04070149.1| hypothetical protein bthur0013_4460 [Bacillus thuringiensis IBL
200]
gi|74493025|gb|EAO56150.1| A/G-specific adenine DNA glycosylase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218544475|gb|ACK96869.1| A/G-specific adenine glycosylase [Bacillus cereus G9842]
gi|228853418|gb|EEM98188.1| hypothetical protein bthur0013_4460 [Bacillus thuringiensis IBL
200]
Length = 365
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILKKFNIEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISVEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|309792558|ref|ZP_07687020.1| HhH-GPD family protein [Oscillochloris trichoides DG6]
gi|308225372|gb|EFO79138.1| HhH-GPD family protein [Oscillochloris trichoides DG6]
Length = 293
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 8/203 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + L + + + ++V+ ++ Q+ V +
Sbjct: 4 NLLLAWFAQHARALPWRQSRDPYQILVSEVMLQQTQVDRVLPKYAAFLATFPNLHALANA 63
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ +G R+ N+ + ++ ++D + P+ + L LPGIG A I
Sbjct: 64 PTAEVIRAWAGLGYNRRAV-NLQRAAQQVMAQYDGQFPRNVAELRSLPGIGPYTAGAIAC 122
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR----IIPPKHQYNAHYWLVLHG 202
AF + +DT+I R+ R + P E+ LL ++P + + L+ G
Sbjct: 123 FAFEQDVVFMDTNIRRVLQRALVGPDLQVAPPERQLLEQSATLLPSGQGWAWNQALMELG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+C AR P C C I +C+
Sbjct: 183 ALICTARNPSCAQCPIQRVCRAY 205
>gi|18977601|ref|NP_578958.1| glycosylase [Pyrococcus furiosus DSM 3638]
gi|18893320|gb|AAL81353.1| glycosylase putative; mutY-nth family [Pyrococcus furiosus DSM
3638]
Length = 225
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
++ + + I + ++P + + + ++ ++S ++ D
Sbjct: 1 MERKRLRSSSFNETLEEKKARAQRIIEILKREYPRERH--VSGDPYRTLIRCIISQRNRD 58
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI--GIYRKKSENIISLSHILINEFDN 121
+K ++ LF+ + +++ + +Q ++R G+++ K + I+ S I++ ++
Sbjct: 59 EVTDKVSEELFKRYKSIEEIANESVENMQEFLRKQKVGLWKNKGKWIVEASRIILYKYGG 118
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQ 180
K+P TLE L +LPGIGRK AN++L+ FG P I VDTH++RIS R+GLAP TP KVE+
Sbjct: 119 KVPNTLEELMKLPGIGRKCANIVLAYGFGKPAIPVDTHVYRISRRLGLAPINSTPEKVEE 178
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L +IP + ++ +V HG+ +C+ KP+C+ C ++ LC +I
Sbjct: 179 ILKTLIPVEEWIYVNHAMVDHGKSICRPIKPKCELCPLNELCPKI 223
>gi|260566905|ref|ZP_05837375.1| A/G-specific adenine glycosylase [Brucella suis bv. 4 str. 40]
gi|260156423|gb|EEW91503.1| A/G-specific adenine glycosylase [Brucella suis bv. 4 str. 40]
Length = 375
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V E T
Sbjct: 24 LLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTVEAVKSYFLRFIERWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ M E + +G Y ++ N+ + I++ E + P++ GL LPGIG
Sbjct: 84 VRAMAKASEDDILRAWAGLGYYS-RARNLKKCADIVVAEHGGEFPKSAAGLKELPGIGDY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
+ I ++AFG VD ++ R+ +R+ P ++ + ++ PP +
Sbjct: 143 TSAAIAAIAFGEQVAVVDGNVERVISRLYAIDTPLPVAKAQICALMGQMTPPDRPGDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C ++ C
Sbjct: 203 AMMDLGATICTPRRPACALCPLNKGC 228
>gi|228931950|ref|ZP_04094844.1| hypothetical protein bthur0009_4350 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228827735|gb|EEM73475.1| hypothetical protein bthur0009_4350 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 365
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILNKFNIEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|150395767|ref|YP_001326234.1| A/G-specific adenine glycosylase [Sinorhizobium medicae WSM419]
gi|150027282|gb|ABR59399.1| A/G-specific adenine glycosylase [Sinorhizobium medicae WSM419]
Length = 370
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 84/222 (37%), Gaps = 16/222 (7%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVN 67
TP+ + L + +L + + + + ++ ++ Q+T V
Sbjct: 1 MTPEPATDAAALLLGWYDRHHRDLPWRISPPMARKGAVADPYHVWLSEVMLQQTTVKAVK 60
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ + T + A + + +G Y ++ N+ + ++ + + P
Sbjct: 61 AYFQKFLALWPTVGDLAAADTEDVMKAWAGLGYYA-RARNLKKCAEAVVRDHGGRFPDRE 119
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLR 184
E L LPGIG A I ++AF + +D ++ R+ +R+ P ++ +
Sbjct: 120 EELKALPGIGDYTAAAIAAIAFNRRSAVLDGNVERVISRLHAVETPLPAAKPEMRALVHT 179
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ P + ++ G +C ++P C C C+ +K
Sbjct: 180 LTPLGRPGDFAQAMMDLGATICTPKRPACSLCPFRADCRALK 221
>gi|315645141|ref|ZP_07898267.1| A/G-specific adenine glycosylase [Paenibacillus vortex V453]
gi|315279562|gb|EFU42867.1| A/G-specific adenine glycosylase [Paenibacillus vortex V453]
Length = 380
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 83/212 (39%), Gaps = 9/212 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+Y + + K +L + + + + V+ ++ Q+ V E
Sbjct: 1 MYNTELKRYFSQELLDWYEVNKRDLPWRRHRDPYYIWVSEIMLQQTRVDTVIPYFHRFIE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E + +G Y ++ N+ + + + + +P + ++ L G
Sbjct: 61 RFPTIQSLADAPEDDVLKCWEGLGYYS-RARNLQAAARQVTELYGGVMPSGKDEVSGLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IG + I S+AF IP VD ++ R+ +R L K+E+ +L ++P
Sbjct: 120 IGPYTSGAIRSIAFNIPAAAVDGNVMRVLSRYFLIEEDIMKVKTRTKMEELVLTLVPEGR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G +C + P+C C + C
Sbjct: 180 ASDFTQALMELGALICTPKSPKCLVCPVMEHC 211
>gi|138894142|ref|YP_001124595.1| A/G-specific adenine DNA glycosylase [Geobacillus
thermodenitrificans NG80-2]
gi|134265655|gb|ABO65850.1| A/G-specific adenine DNA glycosylase [Geobacillus
thermodenitrificans NG80-2]
Length = 368
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 12 AREFQRDLLDWFARERRDLPWRQDRDPYKVWVSEVMLQQTRVETVIPYFEKFIRQFPTLE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + + + K+P + ++L G+G
Sbjct: 72 ALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKERYGGKVPDNPDEFSKLKGVGPYTV 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+LS+A+G+P VD ++ R+ +R+ L EQ + I+ + +
Sbjct: 131 GAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKASTRKRFEQIVREIMAYEQPGAFNE 190
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC R+P C C + C+ +
Sbjct: 191 ALIELGALVCTPRRPSCLLCPVQAHCRAFAE 221
>gi|228995833|ref|ZP_04155492.1| hypothetical protein bmyco0003_4300 [Bacillus mycoides Rock3-17]
gi|229003451|ref|ZP_04161271.1| hypothetical protein bmyco0002_4260 [Bacillus mycoides Rock1-4]
gi|228757829|gb|EEM07054.1| hypothetical protein bmyco0002_4260 [Bacillus mycoides Rock1-4]
gi|228763913|gb|EEM12801.1| hypothetical protein bmyco0003_4300 [Bacillus mycoides Rock3-17]
Length = 364
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 90/211 (42%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEKFQHDLISWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++++ +G Y ++ N+ + + + K+P ++ + +L G+G
Sbjct: 71 ALASADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGKVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISKENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|332304467|ref|YP_004432318.1| A/G-specific adenine glycosylase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332171796|gb|AEE21050.1| A/G-specific adenine glycosylase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 354
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
I F + +L + +++ V+ ++ Q+ V + +
Sbjct: 12 ANRILSWFDSH---GRKDLPWQQGKTPYSVWVSEIMLQQTQVKTVIPYYQKFMQRFPDIL 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++ ++ +G Y ++ N+ + ++ +++D K PQ + + LPG+GR A
Sbjct: 69 TLANAPQDEVLHHWTGLGYYA-RARNLQKAAQVIRDQYDGKFPQDINDVIALPGVGRSTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHY 196
+LS+A +D ++ R+ R G K VEQ+L + + P +
Sbjct: 128 GAVLSLACAQHHSILDGNVKRVLARYFAVDGWPGKKDVEQALWQYADSLTPNSRTGDYTQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C KP+C SC + C Q
Sbjct: 188 AMMDMGATICTRSKPKCDSCPLQQNCLAFAQ 218
>gi|289550416|ref|YP_003471320.1| A/G-specific adenine glycosylase [Staphylococcus lugdunensis
HKU09-01]
gi|289179948|gb|ADC87193.1| A/G-specific adenine glycosylase [Staphylococcus lugdunensis
HKU09-01]
Length = 349
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 8/211 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + EL + + + + ++ ++ Q+ V + T
Sbjct: 3 RERTFKRHLEDWFNKNQRELPWRETADPYYIWLSEVMLQQTQVKTVIDYYHRFIQRFPTI 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ E ++ Y +G Y ++ N S + + +P E +L G+G
Sbjct: 63 KELSDAHEDEVLKYWEGLGYYS-RARNFHSAIKEVHQVYRGIVPSQPEHFEKLKGVGPYT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHY 196
++S+AF P VD ++FR+ +RI + ++ + P +H +
Sbjct: 122 KAAVMSIAFNHPLPTVDGNVFRVWSRINNDYSDIKLQSTRKAYENQLEPYVQEHAGTFNQ 181
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C + P C C I + C+ +Q
Sbjct: 182 AMMELGALICTPKNPLCLFCPIQSHCEAFEQ 212
>gi|316935985|ref|YP_004110967.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris DX-1]
gi|315603699|gb|ADU46234.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris DX-1]
Length = 377
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 34 LLAWYDRHRRSLPWRAPPGASADPYAVWLSEIMLQQTTVRAVGPYFDKFMARWPSVTALG 93
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +G Y ++ N+ + + + + + P T EGL LPG+G A I
Sbjct: 94 EASLDDVLKMWAGLGYYS-RARNLHACAVAVTRQHGGRFPDTEEGLRALPGVGPYTAAAI 152
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLH 201
++AF T+ VD +I R+ +R+ + P ++ ++ P ++ L+
Sbjct: 153 AAIAFSRRTMPVDGNIERVVSRLCAVEDELPKAKPRIKALAETLLGPSRAGDSAQALMDL 212
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C +KP C C + + C
Sbjct: 213 GATICTPKKPACALCPLMDGC 233
>gi|228925711|ref|ZP_04088797.1| hypothetical protein bthur0010_4370 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229120119|ref|ZP_04249371.1| hypothetical protein bcere0016_4360 [Bacillus cereus 95/8201]
gi|228663357|gb|EEL18945.1| hypothetical protein bcere0016_4360 [Bacillus cereus 95/8201]
gi|228833933|gb|EEM79484.1| hypothetical protein bthur0010_4370 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 365
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|268317475|ref|YP_003291194.1| A/G-specific adenine glycosylase [Rhodothermus marinus DSM 4252]
gi|262335009|gb|ACY48806.1| A/G-specific adenine glycosylase [Rhodothermus marinus DSM 4252]
Length = 383
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 11/226 (4%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTD 63
S S L L L E F+ + +L + + + + VA ++ Q+
Sbjct: 2 SRRASSRSYLDRLTPA--LRETFHGLIDWYRRHARDLPWRRTRDPYRIWVAEVMLQQTRV 59
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
+ T + + A + +G Y ++ N+ + L+ E ++
Sbjct: 60 DQAGPYYERFLRAFPTVEALAAASLDDVLRCWEGLGYYA-RARNLHRAARQLVAEHGGRL 118
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKV 178
P T E L RLPG+G A + S+AFG P +D ++ R+ R+ T +
Sbjct: 119 PTTYEALRRLPGVGPYTAAAVASIAFGEPRAVLDGNVIRVLTRVLAVADDARASATRRAL 178
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ +I + + L+ G VC +P+C C + +C+
Sbjct: 179 QEVADALISDEEPGTFNQALMELGATVCTPVQPRCNDCPLREVCRA 224
>gi|300214473|gb|ADJ78889.1| Endonuclease III [Lactobacillus salivarius CECT 5713]
Length = 213
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ KE + +P+ L + + ++AV+LSAQ+TD VNK T LF+
Sbjct: 1 MLDSKETQYALQEMGKMFPNATTSLVADSDYHFLLAVILSAQTTDKAVNKVTPSLFDRYK 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M K++ Y++TIG+Y+ K++ ++ S +L++ F++ +P+T + L L G+GR
Sbjct: 61 YPIDMANADPKEVAEYVKTIGLYKNKAKYLVECSKMLVDNFNSVVPKTHKELMSLSGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ FG+P VDTH+ RIS R+ + P T + E+ L+ +P + +++
Sbjct: 121 KTADVVLAERFGVPAFAVDTHVHRISKRLAIVPEDATVRETEKILMSKVPKEDWIKSYHR 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ GRY C AR P+C++C + +C+ ++
Sbjct: 181 MIFWGRYQCMARAPKCETCPLLEICQEGQK 210
>gi|294010072|ref|YP_003543532.1| A/G-specific DNA glycosylase [Sphingobium japonicum UT26S]
gi|292673402|dbj|BAI94920.1| A/G-specific DNA glycosylase [Sphingobium japonicum UT26S]
Length = 356
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 12/212 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
++I + L + + + + ++ ++ Q+T V
Sbjct: 8 DKIASDLLAHYDVHARSLPWRAPPGANAADPYRVWLSEVMLQQTTVAAVGPYFATFTRRW 67
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A + ++ +G Y ++ N+++ + + + P T EGL LPG+G
Sbjct: 68 PDVAALAAEEDAEVMAAWAGLGYYA-RARNLLACARAVAGQHGGAFPDTEEGLRALPGVG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A + ++AFG + VD ++ R+ R+ P ++ + I P +
Sbjct: 127 AYTAAAVAAIAFGRRAVVVDANVERVVARLFAISTPLPAARPEIRAATDAITPDLRAGDF 186
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C AR P C C + C +
Sbjct: 187 AQAMMDLGATICTARNPACGICPLRPHCAAFR 218
>gi|320449294|ref|YP_004201390.1| A/G-specific adenine glycosylase [Thermus scotoductus SA-01]
gi|320149463|gb|ADW20841.1| A/G-specific adenine glycosylase [Thermus scotoductus SA-01]
Length = 344
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 10/203 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + L + + + ++VA +L Q+ T +
Sbjct: 1 MEKFQEALLAWYRENPRSLPWRGEKDPYRILVAEVLLQQTHTAQAIPYYHRFLARFPTLK 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ +++ + G YR+ + +P++ L +LPG+G A
Sbjct: 61 ALREASLEEVLKAWQGAGYYRRALHLHRLA------QEVEALPRSYAELLKLPGLGPYTA 114
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP-KHQYNAHYWLVL 200
+ S+AFG VD ++ R+ +R+ P + ++P + + L+
Sbjct: 115 AAVASLAFGERVAAVDGNVRRVLSRVFALENPAPRLLRNLAQGLLPQGEAPGEWNQALMD 174
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G VC R+P C C ++ C+
Sbjct: 175 LGATVCLPRRPLCSECPVAPFCQ 197
>gi|315637997|ref|ZP_07893182.1| endonuclease III [Campylobacter upsaliensis JV21]
gi|315481845|gb|EFU72464.1| endonuclease III [Campylobacter upsaliensis JV21]
Length = 211
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K I LF K+ P EL + + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLAIKELFLKKFDKPVTELKFSTLYELLVCVMLSAQCTDKRVNLITPALFKAYPDVKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +++YI++ + K++N+I ++ + F+ +IP + L L G+G+K A+
Sbjct: 62 LAKANLASVKSYIQSCSFFNNKAQNLIKMAQAVCEHFNGEIPLNEKDLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L RI H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRIF-KDELNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLC 222
RY CKA+ P C C + + C
Sbjct: 181 RYTCKAKNPLCHQCFLYDFC 200
>gi|222094257|ref|YP_002528314.1| a/g-specific adenine glycosylase [Bacillus cereus Q1]
gi|221238312|gb|ACM11022.1| A/G-specific adenine glycosylase [Bacillus cereus Q1]
Length = 365
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|57505868|ref|ZP_00371793.1| endonuclease III [Campylobacter upsaliensis RM3195]
gi|57015898|gb|EAL52687.1| endonuclease III [Campylobacter upsaliensis RM3195]
Length = 211
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K I LF K+ P EL + + L+V V+LSAQ TD VN T LF+ +
Sbjct: 2 KRNLAIKELFLKKFDKPVTELKFSTLYELLVCVMLSAQCTDKRVNLITPALFKAYPNIKS 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ YI++ + K++N+I ++ + F+ +IP + L L G+G+K A+
Sbjct: 62 LAKANLASVKGYIQSCSFFNNKAQNLIKMAQAVCEHFNGEIPLNEKDLKSLAGVGQKTAH 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
V+L G + VDTH+FR+S+R+GL+ KTP E+ L RI H +VL G
Sbjct: 122 VVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTRIF-KDELNYLHQAMVLFG 180
Query: 203 RYVCKARKPQCQSCIISNLC 222
RY CKA+ P C C + + C
Sbjct: 181 RYTCKAKNPLCHQCFLYDFC 200
>gi|167759794|ref|ZP_02431921.1| hypothetical protein CLOSCI_02157 [Clostridium scindens ATCC 35704]
gi|167662413|gb|EDS06543.1| hypothetical protein CLOSCI_02157 [Clostridium scindens ATCC 35704]
Length = 585
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L E+ + + K +L + + + + V+ ++ Q+ V + T +
Sbjct: 236 LNEMAEPLMAWYRNHKRDLPWRRNPDAYRVWVSEIMLQQTRVEAVKSYYERFLRELPTVE 295
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E L +G Y + N+ + ++ ++ + P T E + L GIG A
Sbjct: 296 ALARAEEDTLLKLWEGLGYYN-RVRNMQKAAQQIMIDYHGRFPDTYEEIRSLKGIGNYTA 354
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I + AFGIP VD ++ R+ +R+ + K+E++L ++IP + +
Sbjct: 355 GAISAFAFGIPKPAVDGNVLRVVSRLTGSREDIMKQSVRKKMEEALEKVIPADGASDFNQ 414
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
L+ G VC P+C C +++LC+ KQ
Sbjct: 415 GLIELGAIVCVPNGEPKCGECPVAHLCEARKQ 446
>gi|329929447|ref|ZP_08283181.1| A/G-specific adenine glycosylase [Paenibacillus sp. HGF5]
gi|328936335|gb|EGG32782.1| A/G-specific adenine glycosylase [Paenibacillus sp. HGF5]
Length = 382
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 9/214 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + + + + V+ ++ Q+ V E
Sbjct: 1 MHNTEHKRYFSLELLDWYEINKRDLPWRRHRDPYYIWVSEIMLQQTRVDTVIPYFHRFIE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E + +G Y ++ N+ + + + ++D +P + ++ L G
Sbjct: 61 RFPTIQSLADAPEDDVLKCWEGLGYYS-RARNLQAAARQVTEQYDGVMPSGKDEVSGLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IG + I S+AF IP VD ++ R+ +R L K+E+ +L ++P
Sbjct: 120 IGPYTSGAIRSIAFNIPAAAVDGNVMRVLSRYFLIEEDIMKVKTRTKMEELVLTLVPDGR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ G +C + P+C C + C
Sbjct: 180 ASDFTQALMELGALICTPKSPKCLVCPVMEHCSA 213
>gi|228989644|ref|ZP_04149628.1| hypothetical protein bpmyx0001_4160 [Bacillus pseudomycoides DSM
12442]
gi|228770181|gb|EEM18761.1| hypothetical protein bpmyx0001_4160 [Bacillus pseudomycoides DSM
12442]
Length = 364
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 90/211 (42%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEKFQHDLISWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++++ +G Y ++ N+ + + + K+P ++ + +L G+G
Sbjct: 71 ALASADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGKVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISKENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|206974327|ref|ZP_03235244.1| A/G-specific adenine glycosylase [Bacillus cereus H3081.97]
gi|217958059|ref|YP_002336603.1| A/G-specific adenine glycosylase [Bacillus cereus AH187]
gi|229137325|ref|ZP_04265940.1| hypothetical protein bcere0013_4590 [Bacillus cereus BDRD-ST26]
gi|206747567|gb|EDZ58957.1| A/G-specific adenine glycosylase [Bacillus cereus H3081.97]
gi|217067255|gb|ACJ81505.1| A/G-specific adenine glycosylase [Bacillus cereus AH187]
gi|228646144|gb|EEL02363.1| hypothetical protein bcere0013_4590 [Bacillus cereus BDRD-ST26]
Length = 365
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDIKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|148656645|ref|YP_001276850.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
gi|148568755|gb|ABQ90900.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
Length = 219
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 7/209 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGEL-------YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ + + P L N F +++A +LS ++ D LF
Sbjct: 5 DIHAAMAILRAEMPRFPKPLIDGMGEEEARNPFRILIATILSLRTKDTMTAVVAPRLFAA 64
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
ADTP+KMLA+GE ++ I +G YR K+ I ++ ILI+++ ++P L+ L LPG+
Sbjct: 65 ADTPEKMLALGEDEIAALIYPVGFYRNKARTIRTICQILIDQYGGEVPADLDALLALPGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK AN++L+ F +P I VDTH+ RI NR G +TP + E L I+PP++ +
Sbjct: 125 GRKTANLVLTAGFDLPGICVDTHVHRICNRWGYVQTRTPEETEMRLREILPPEYWKEING 184
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
LV G+ +C P+C C +++LC RI
Sbjct: 185 LLVTLGQNICHPTSPRCSVCPLAHLCARI 213
>gi|118476207|ref|YP_893358.1| A/G-specific DNA-adenine glycosylase [Bacillus thuringiensis str.
Al Hakam]
gi|196045278|ref|ZP_03112510.1| A/G-specific adenine glycosylase [Bacillus cereus 03BB108]
gi|225862501|ref|YP_002747879.1| A/G-specific adenine glycosylase [Bacillus cereus 03BB102]
gi|229182844|ref|ZP_04310081.1| hypothetical protein bcere0004_4250 [Bacillus cereus BGSC 6E1]
gi|118415432|gb|ABK83851.1| A/G-specific DNA-adenine glycosylase [Bacillus thuringiensis str.
Al Hakam]
gi|196023862|gb|EDX62537.1| A/G-specific adenine glycosylase [Bacillus cereus 03BB108]
gi|225789742|gb|ACO29959.1| A/G-specific adenine glycosylase [Bacillus cereus 03BB102]
gi|228600650|gb|EEK58233.1| hypothetical protein bcere0004_4250 [Bacillus cereus BGSC 6E1]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II K+ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAKNPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|83313083|ref|YP_423347.1| A/G-specific DNA glycosylase [Magnetospirillum magneticum AMB-1]
gi|82947924|dbj|BAE52788.1| A/G-specific DNA glycosylase [Magnetospirillum magneticum AMB-1]
Length = 389
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 11/204 (5%)
Query: 31 LFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + + L + + + + ++ ++ Q+T V + +
Sbjct: 47 LLLAWYDRDRRVLPWRYAPGEAADPYHVWLSEVMLQQTTVAAVIPYFQAFIRRWPRVGDL 106
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A +++ +G Y ++ N+ + + ++ + P+ GL +LPGIG A
Sbjct: 107 AAAATEEVMAAWAGLGYYA-RARNLHACAKLVAEWRGGRFPEDEAGLRQLPGIGDYTAAA 165
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVL 200
I ++AFG + VD ++ R+ R+ P +++ + P + ++
Sbjct: 166 IAAIAFGHRAVVVDGNVERVMARMFAVTDPLPAAKPRLKELAATLTPDDRAGDYAQAVMD 225
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G +C R P C C C+
Sbjct: 226 LGATICTPRSPACGLCPWRPGCRA 249
>gi|30260681|ref|NP_843058.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Ames]
gi|47525792|ref|YP_017141.1| A/G-specific adenine glycosylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183519|ref|YP_026771.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Sterne]
gi|165870658|ref|ZP_02215311.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0488]
gi|167634699|ref|ZP_02393018.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0442]
gi|167640800|ref|ZP_02399059.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0193]
gi|170688628|ref|ZP_02879834.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0465]
gi|170707101|ref|ZP_02897557.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0389]
gi|177655120|ref|ZP_02936750.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0174]
gi|190568184|ref|ZP_03021093.1| A/G-specific adenine glycosylase [Bacillus anthracis
Tsiankovskii-I]
gi|227816606|ref|YP_002816615.1| A/G-specific adenine glycosylase [Bacillus anthracis str. CDC 684]
gi|229601734|ref|YP_002865125.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0248]
gi|254686910|ref|ZP_05150768.1| A/G-specific adenine glycosylase [Bacillus anthracis str.
CNEVA-9066]
gi|254725990|ref|ZP_05187772.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A1055]
gi|254738863|ref|ZP_05196565.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Western
North America USA6153]
gi|254743753|ref|ZP_05201438.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Kruger B]
gi|254756292|ref|ZP_05208321.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Vollum]
gi|254762111|ref|ZP_05213960.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Australia
94]
gi|30254049|gb|AAP24544.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Ames]
gi|47500940|gb|AAT29616.1| A/G-specific adenine glycosylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177446|gb|AAT52822.1| A/G-specific adenine glycosylase [Bacillus anthracis str. Sterne]
gi|164713492|gb|EDR19016.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0488]
gi|167511194|gb|EDR86581.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0193]
gi|167529773|gb|EDR92521.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0442]
gi|170127879|gb|EDS96750.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0389]
gi|170667488|gb|EDT18245.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0465]
gi|172080269|gb|EDT65359.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0174]
gi|190560676|gb|EDV14652.1| A/G-specific adenine glycosylase [Bacillus anthracis
Tsiankovskii-I]
gi|227006044|gb|ACP15787.1| A/G-specific adenine glycosylase [Bacillus anthracis str. CDC 684]
gi|229266142|gb|ACQ47779.1| A/G-specific adenine glycosylase [Bacillus anthracis str. A0248]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVVRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|109896407|ref|YP_659662.1| A/G-specific adenine glycosylase [Pseudoalteromonas atlantica T6c]
gi|109698688|gb|ABG38608.1| A/G-specific DNA-adenine glycosylase [Pseudoalteromonas atlantica
T6c]
Length = 354
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 12/211 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
I F + +L + +++ V+ ++ Q+ V +
Sbjct: 12 ANRILTWFDSH---GRKDLPWQQGKTPYSVWVSEIMLQQTQVKTVIPYYQKFMLRFPDIL 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++ ++ +G Y ++ N+ + ++ +E+ P + + LPGIGR A
Sbjct: 69 SLANAPQDEVLHHWTGLGYYA-RARNLQKAAQVIRDEYGGVFPPDINDVVALPGIGRSTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHY 196
+LS+A G +D ++ R+ R G K VEQ+L + + P +
Sbjct: 128 GAVLSLACGQHHSILDGNVKRVLARYFAVDGWPGKKDVEQALWQYADSLTPSSRTGDYTQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C KP+C +C + C Q
Sbjct: 188 AMMDMGATICTRSKPKCDNCPLQQSCLAFAQ 218
>gi|196034710|ref|ZP_03102118.1| A/G-specific adenine glycosylase [Bacillus cereus W]
gi|196040118|ref|ZP_03107420.1| A/G-specific adenine glycosylase [Bacillus cereus NVH0597-99]
gi|218901661|ref|YP_002449495.1| A/G-specific adenine glycosylase [Bacillus cereus AH820]
gi|228913208|ref|ZP_04076847.1| hypothetical protein bthur0012_4520 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228944274|ref|ZP_04106650.1| hypothetical protein bthur0007_4490 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229089583|ref|ZP_04220849.1| hypothetical protein bcere0021_4300 [Bacillus cereus Rock3-42]
gi|300119081|ref|ZP_07056792.1| A/G-specific adenine glycosylase [Bacillus cereus SJ1]
gi|195992753|gb|EDX56713.1| A/G-specific adenine glycosylase [Bacillus cereus W]
gi|196028973|gb|EDX67578.1| A/G-specific adenine glycosylase [Bacillus cereus NVH0597-99]
gi|218539710|gb|ACK92108.1| A/G-specific adenine glycosylase [Bacillus cereus AH820]
gi|228693734|gb|EEL47431.1| hypothetical protein bcere0021_4300 [Bacillus cereus Rock3-42]
gi|228815425|gb|EEM61670.1| hypothetical protein bthur0007_4490 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228846613|gb|EEM91626.1| hypothetical protein bthur0012_4520 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|298723697|gb|EFI64428.1| A/G-specific adenine glycosylase [Bacillus cereus SJ1]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|90425840|ref|YP_534210.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris
BisB18]
gi|90107854|gb|ABD89891.1| A/G-specific DNA-adenine glycosylase [Rhodopseudomonas palustris
BisB18]
Length = 371
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + + L + + + + ++ ++ Q+T V +
Sbjct: 22 RLLLAWYDRHRRALPWRALPGQAADPYRVWLSEIMLQQTTVKAVGPYFEKFLARWPNVAA 81
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + + +G Y ++ N+ + + + + P T GL LPGIG A
Sbjct: 82 LGRASQDDVLRMWAGLGYYS-RARNLFACAVAVSRDHGGAFPDTEAGLRALPGIGPYTAA 140
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG + VD +I R+ +R+ P K+ + L + ++ L+
Sbjct: 141 AIAAIAFGRHCMPVDGNIERVVSRLFAVEDALPQAKPKISELALTLAGEARAGDSAQALM 200
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C ++ C
Sbjct: 201 DLGATICTPKKPACALCPLNEDC 223
>gi|307298716|ref|ZP_07578519.1| endonuclease III [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915881|gb|EFN46265.1| endonuclease III [Thermotogales bacterium mesG1.Ag.4.2]
Length = 220
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 110/186 (59%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
E Y + F ++V+ +LS ++ D N +A++ LF + PQ ++ + L + I+ G
Sbjct: 20 PREQEYGDPFKVLVSTILSQRTRDENTEEASRRLFSVYPDPQSLIDAKPEDLYDLIKASG 79
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
+YR+K+ II+ + +++ F +P TLE L +PG+GRK AN++L+++F + VDTH
Sbjct: 80 MYRQKAARIINCARMIVESFAGVVPDTLEELVTIPGVGRKTANIVLNVSFKKEALAVDTH 139
Query: 160 IFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ RI+NR+G KTP+ E +L++I+PP + +V GR +C+ P+C C IS
Sbjct: 140 VHRIANRLGWVKTKTPDDTEFALMKILPPSIWGPVNGSMVEFGREICRPIGPKCNLCGIS 199
Query: 220 NLCKRI 225
C+
Sbjct: 200 QCCEYF 205
>gi|260460277|ref|ZP_05808529.1| A/G-specific adenine glycosylase [Mesorhizobium opportunistum
WSM2075]
gi|259033922|gb|EEW35181.1| A/G-specific adenine glycosylase [Mesorhizobium opportunistum
WSM2075]
Length = 357
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 17/210 (8%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ EL + + + + ++ ++ Q+T V + E
Sbjct: 8 RLLAWYDVHHRELPWRVTPREHARGARPDPYRIWLSEVMLQQTTVEAVKSYFRAFVEKWP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A + + +G Y + + L+ + P T L LPGIG
Sbjct: 68 DVEALAAAPTEDVMKAWAGLGYYSRAR--NLKACADLVAARGGRFPDTEAALRDLPGIGA 125
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAH 195
+ I ++AF P VD ++ R+ +R+ ++ + R++P +
Sbjct: 126 YTSAAITAIAFDRPAAVVDGNVERVISRLFSITTPLSEAKGEIRAHVERMVPATRPGDFA 185
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C R+P+C C + C +
Sbjct: 186 QAMMDLGATICTPRRPRCMLCPLREDCSAV 215
>gi|42779657|ref|NP_976904.1| A/G-specific adenine glycosylase [Bacillus cereus ATCC 10987]
gi|42735574|gb|AAS39512.1| A/G-specific adenine glycosylase [Bacillus cereus ATCC 10987]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|49476824|ref|YP_034784.1| A/G-specific adenine glycosylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328380|gb|AAT59026.1| A/G-specific adenine glycosylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|52144790|ref|YP_082039.1| A/G-specific adenine glycosylase [Bacillus cereus E33L]
gi|229154228|ref|ZP_04282349.1| hypothetical protein bcere0010_4280 [Bacillus cereus ATCC 4342]
gi|51978259|gb|AAU19809.1| A/G-specific adenine glycosylase [Bacillus cereus E33L]
gi|228629242|gb|EEK85948.1| hypothetical protein bcere0010_4280 [Bacillus cereus ATCC 4342]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|229074386|ref|ZP_04207423.1| hypothetical protein bcere0024_4160 [Bacillus cereus Rock4-18]
gi|228708748|gb|EEL60884.1| hypothetical protein bcere0024_4160 [Bacillus cereus Rock4-18]
Length = 365
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILEKFNIEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHTAVKEVKEVYGGIVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|217076701|ref|YP_002334417.1| nth endonuclease III [Thermosipho africanus TCF52B]
gi|217036554|gb|ACJ75076.1| nth endonuclease III [Thermosipho africanus TCF52B]
Length = 203
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+E++ L +P E + F +++ +LS +S D N A ++LF TP ++
Sbjct: 2 EIEKVAKLIIENFPRDHKE---KDPFKVLITTVLSQRSKDENTEIAAENLFNKYKTPFEL 58
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E+ + I+ G+YR+K++ II +S I++ ++ +P +LE L +LPG+GRK AN+
Sbjct: 59 SKAKEEDIYELIKPAGLYRQKAKRIIEISKIIVEKYSGIVPDSLEELLKLPGVGRKTANI 118
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+L ++F + VDTH+ RISNR+G KTP + E L+ I+P + +V G+
Sbjct: 119 VLYVSFSKSALAVDTHVHRISNRLGWVNTKTPEETEFKLMEILPKNLWGPINGSMVEFGK 178
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VCK P C+ C IS CK
Sbjct: 179 KVCKPVSPNCKICPISKYCKW 199
>gi|209886098|ref|YP_002289955.1| A/G-specific adenine glycosylase [Oligotropha carboxidovorans OM5]
gi|209874294|gb|ACI94090.1| A/G-specific adenine glycosylase [Oligotropha carboxidovorans OM5]
Length = 349
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + + L + + + + ++ ++ Q+T V
Sbjct: 5 ELLLAWYDRHRRVLPWRAKPGETADPYRVWLSEIMLQQTTVKAVGPYFMKFVARWPRVTD 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + +G Y ++ N+ + + + + P T EGL LPGIG A
Sbjct: 65 LAAASLDDVLRMWAGLGYYS-RARNLHACAVAVASAHGGAFPDTEEGLRALPGIGPYTAA 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLV 199
I ++AF T+ VD +I R+ +R+ P ++++ ++ P ++ L+
Sbjct: 124 AIAAIAFDCRTMPVDGNIERVVSRLFAVEEALPKAKPEIQRLAATLLGPSRAGDSAQALM 183
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C ++ C
Sbjct: 184 DLGATICTPKKPACVLCPLNEDC 206
>gi|163794970|ref|ZP_02188939.1| A/G-specific DNA glycosylase [alpha proteobacterium BAL199]
gi|159179789|gb|EDP64316.1| A/G-specific DNA glycosylase [alpha proteobacterium BAL199]
Length = 360
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 11/203 (5%)
Query: 31 LFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + + + + + + + ++ ++ Q+T V T +
Sbjct: 17 LLLAWYDRHRRRMPWRAKPGQPVDPYRVWLSEIMLQQTTVATVGPYFNGFVARWPTVGDL 76
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + +++ D P T L LPG+G A
Sbjct: 77 AFAPLDEVLSAWAGLGYYA-RARNLHACARAVVDRHDGVFPDTEAVLLTLPGVGAYTAAA 135
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVL 200
I ++AF VD ++ R+ R+ P + + + P + ++
Sbjct: 136 IAAIAFDRKATVVDGNVERVMARMFAIEEPMPAAKPRLRERAATLTPEHRPGDYAQAVMD 195
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G VC R P C SC S C+
Sbjct: 196 LGATVCTPRSPTCLSCPWSTSCR 218
>gi|313202745|ref|YP_004041402.1| a/g-specific DNA-adenine glycosylase [Paludibacter propionicigenes
WB4]
gi|312442061|gb|ADQ78417.1| A/G-specific DNA-adenine glycosylase [Paludibacter propionicigenes
WB4]
Length = 358
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 89/214 (41%), Gaps = 9/214 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
T L +I + + + K +L + + + + ++ ++ Q+ E
Sbjct: 4 TTDALSQISNILTKWYIENKRDLPWREITDPYKIWISEIILQQTRVNQGMSYYLRFIERF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + E ++ Y + +G Y ++ N+ + ++++F+ + P+ + +L GIG
Sbjct: 64 PTVKTLAVADEDEVLKYWQGLGYYT-RARNLHKAAKKIVSDFEGEFPKLHADILKLAGIG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQY 192
A I S A+ P VD +++R+ +R + G + + ++P +
Sbjct: 123 VYTAAAICSFAYNQPYAVVDGNVYRVLSRLFGIETPIDTGSGQKEFAELAQNLLPTQQPG 182
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G C P C C ++ CK ++
Sbjct: 183 LHNQAIMEFGALQCTPGLPDCVKCPLNTFCKSLQ 216
>gi|257897052|ref|ZP_05676705.1| A/G-specific adenine glycosylase [Enterococcus faecium Com12]
gi|257833617|gb|EEV60038.1| A/G-specific adenine glycosylase [Enterococcus faecium Com12]
Length = 392
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+T +E +E F + K L + + + + ++ + Q+ V E
Sbjct: 8 WTDEETKEFQDQFIQWYEQEKRNLPWRYNRDPYRIWISETMLQQTRVDTVIDYFYRFMEW 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E+KL +G Y ++ NI + + +++EFD K+PQT E ++ L GI
Sbjct: 68 FPTIEELATAPEEKLLKAWEGLGYYS-RARNIQAAAKQIMSEFDGKMPQTPEEISSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G I S+AFG+P VD ++ R+ +R+ ++++ +II +
Sbjct: 127 GPYTTGAIASIAFGLPEPAVDGNVMRVVSRLFCIEADIAKASSRKIFDEAMRKIIDETYP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C P+C++C I C K+
Sbjct: 187 GEFNQAMMDLGSAICTPTSPKCEACPIQAFCLANKR 222
>gi|226310613|ref|YP_002770507.1| A/G-specific adenine glycosylase [Brevibacillus brevis NBRC 100599]
gi|226093561|dbj|BAH42003.1| probable A/G-specific adenine glycosylase [Brevibacillus brevis
NBRC 100599]
Length = 368
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 9/204 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ S K +L + + + + V+ ++ Q+ V + E T ++ E
Sbjct: 25 LLAWYDSQKRDLPWRINKDPYRIWVSEIMLQQTRVETVKPYYANFMEKFPTVSELAKAPE 84
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + + + + +P T E + L G+G A ILS+A
Sbjct: 85 EDVLKAWEGLGYYS-RARNLQAAAREVTVRYGGVVPDTPEEIATLKGVGPYTAGAILSIA 143
Query: 149 FGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ VD ++ R+ +R +A T K+E + ++IP + + L+ G
Sbjct: 144 YEKAEPAVDGNVMRVFSRLLYLTDDIAKPATRIKIEHLVRQVIPEGRAGDFNQALMELGA 203
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VC R PQC +C + + C ++
Sbjct: 204 MVCVPRTPQCLTCPVFDYCMARQE 227
>gi|225848427|ref|YP_002728590.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644019|gb|ACN99069.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Sulfurihydrogenibium azorense Az-Fu1]
Length = 216
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K E+ + + + + N + +++A +LS ++ D A+ LF++
Sbjct: 4 KTFVEVLKILKKESKNWNAPVVAFMGRTENNPYKVLIATILSLRTKDQITALASDRLFKV 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
ADTP+KM+ + ++++ I +G Y+ K++ I +S I++ ++ K+P LE L L G+
Sbjct: 64 ADTPEKMVNLPAEEIEKLIYPVGFYKNKAKTIKEISKIILEKYAGKVPDNLEDLLSLKGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK AN++LS + P I VD H+ RISNR+G+ KTP + E L+ I+P K+ + ++
Sbjct: 124 GRKTANLVLSEGYKKPAICVDVHVHRISNRLGVVKTKTPEETEFKLMEILPKKYWRDVNW 183
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
LV G+ +CK KP C C + N C+ K
Sbjct: 184 VLVAFGQTICKPIKPMCDICPVKNFCEFGK 213
>gi|324324560|gb|ADY19820.1| A/G-specific adenine glycosylase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 365
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|172056692|ref|YP_001813152.1| A/G-specific adenine glycosylase [Exiguobacterium sibiricum 255-15]
gi|171989213|gb|ACB60135.1| A/G-specific adenine glycosylase [Exiguobacterium sibiricum 255-15]
Length = 338
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 85/204 (41%), Gaps = 9/204 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + N + + ++ ++ Q+ V + E TP + + +
Sbjct: 20 LVQWFLREQRQLPWRETKNPYHIWISEIMLQQTRVDTVIPYYQRFTERFPTPHDLASADQ 79
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ Y +G Y + +N+ ++ ++D +P E L G+G +LS+A
Sbjct: 80 SEVLKYWEGLGYYS-RVKNLQIAVQEVVEKYDGIVPDEKERFESLRGVGPYTTGAVLSIA 138
Query: 149 FGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+G P VD ++ R+ + +A KT E ++ +I + + L+ G
Sbjct: 139 YGHPEPAVDGNVMRVLSRVLGIYDDIAAPKTRKVFEAAVHELIDHADPSSFNQGLMELGA 198
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VC + P C C ++++C +
Sbjct: 199 MVCTPKSPMCGLCPVNDVCFAYDR 222
>gi|332701403|ref|ZP_08421491.1| A/G-specific adenine glycosylase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551552|gb|EGJ48596.1| A/G-specific adenine glycosylase [Desulfovibrio africanus str.
Walvis Bay]
Length = 368
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K L + + + ++ ++ Q+ V + E + A
Sbjct: 10 QRLLDWFAIHKKPLPWRENNEPYRIWISEVMLQQTQRDRVGTYFRRFLERFPDVASLAAS 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E L +G Y ++ N+ + I+I+E P + E L LPGIGR A ILS
Sbjct: 70 REDDLLKLWEGLGYYS-RARNLRKAAAIIIDEHGGSFPDSPEALLALPGIGRYTAGAILS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
+A+ P VD ++ R+ R+ +K +IP + ++
Sbjct: 129 IAYNKPEPIVDANVERVFARVFDLDLPVKDKTTSAFLWTKARELIPKDRAREFNQAVMEL 188
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G VC +RKP+C +C I C+ +
Sbjct: 189 GSLVCLSRKPRCSACPIQPHCEAYR 213
>gi|256829543|ref|YP_003158271.1| A/G-specific adenine glycosylase [Desulfomicrobium baculatum DSM
4028]
gi|256578719|gb|ACU89855.1| A/G-specific adenine glycosylase [Desulfomicrobium baculatum DSM
4028]
Length = 360
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 81/205 (39%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ +
Sbjct: 3 AALLDWFSRHKRDLPWRETYSPYHVWISEIMLQQTQMERGVDYFNRWIARFPDLTSLATA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ +G Y ++ N+ + I++++ +P + E L LPGIG A I S
Sbjct: 63 QQDEVLKLWEGLGYYS-RARNLHKAAQIVMDQHGGTLPTSTEALLSLPGIGPYTARAIAS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLH 201
+AF VD ++ R+ +R+ +V + LR++P H + + L+
Sbjct: 122 IAFKQDVCVVDANVERVVSRLYDIEQPIKSRQAQEEVGKFALRLLPKGHARDFNQALMEF 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G VC R P C C +++ C K
Sbjct: 182 GSLVCSPRNPACTGCCLADFCLARK 206
>gi|229095174|ref|ZP_04226167.1| hypothetical protein bcere0020_4310 [Bacillus cereus Rock3-29]
gi|229114116|ref|ZP_04243541.1| hypothetical protein bcere0017_4210 [Bacillus cereus Rock1-3]
gi|228669386|gb|EEL24803.1| hypothetical protein bcere0017_4210 [Bacillus cereus Rock1-3]
gi|228688255|gb|EEL42140.1| hypothetical protein bcere0020_4310 [Bacillus cereus Rock3-29]
Length = 365
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILEKFNIEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHTAVKEVKEVYGGIVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II ++
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAEN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|319760504|ref|YP_004124442.1| endonuclease III [Candidatus Blochmannia vafer str. BVAF]
gi|318039218|gb|ADV33768.1| endonuclease III [Candidatus Blochmannia vafer str. BVAF]
Length = 216
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 88/208 (42%), Positives = 131/208 (62%), Gaps = 3/208 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKG---ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +I + EL Y + F L++AVLLSA++ DV VNK T+ LF++
Sbjct: 1 MNRIKRYQILCKLRDYNANITTYDTELIYHSPFELLIAVLLSARARDVQVNKVTESLFQV 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A+TPQ ML +G +++ YIR+IG++ K+ NII + +LI +F+ +P+ E L LPG+
Sbjct: 61 ANTPQDMLFLGINRIRYYIRSIGLFNSKAVNIIKICQLLIEKFNGFLPENREELESLPGV 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK A++IL++ FG PTI VDTH+FR NR A G VEQ L+ ++P + + N H
Sbjct: 121 GRKTASIILNVIFGWPTIAVDTHVFRFCNRSKFAIGNNVAAVEQKLISVVPREFKKNCHL 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
WL+ HGR C A+KP C SC+I++LC+
Sbjct: 181 WLIRHGRNTCHAKKPSCNSCVINSLCEF 208
>gi|313889661|ref|ZP_07823304.1| A/G-specific adenine glycosylase [Streptococcus pseudoporcinus SPIN
20026]
gi|313121958|gb|EFR45054.1| A/G-specific adenine glycosylase [Streptococcus pseudoporcinus SPIN
20026]
Length = 380
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 84/215 (39%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + + K +L + N + + V+ ++ Q+ V +
Sbjct: 11 MWPEDKIADFRRTLLNWYDQEKRDLPWRRNKNPYHIWVSEIMLQQTQVQTVIPYYHRFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T ++ E++L +G Y + N+ + ++ EFD P + E +++L G
Sbjct: 71 WFPTVAELAVADEERLLKAWEGLGYYS-RVRNMQKAAQQVMTEFDGVFPSSHENISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + ++I P
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQALMDKLIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|217977764|ref|YP_002361911.1| A/G-specific adenine glycosylase [Methylocella silvestris BL2]
gi|217503140|gb|ACK50549.1| A/G-specific adenine glycosylase [Methylocella silvestris BL2]
Length = 359
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 73/203 (35%), Gaps = 11/203 (5%)
Query: 34 LKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + + ++ ++ Q+T V +
Sbjct: 17 AWYDRHRRVLPWRAPPGAAADPYAVWLSEIMLQQTTVAAVKSYFSAFLARWPNVDALARA 76
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ +G Y ++ N+ + + + +F + P L LPG+G A + +
Sbjct: 77 PAEEVMRQWAGLGYYS-RARNLHACAKTVSAKFGGQFPDEEAALRALPGLGPYTAAAVAA 135
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+AF VD ++ R+ +R+ P + + P + + ++ G
Sbjct: 136 IAFCRKAAVVDGNVERVLSRLYAIEAPPPAGKRLIYARAEALTPAERPGDYAQAMMDLGA 195
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C + P C C ++ C +
Sbjct: 196 TICTPKSPACAICPLNGACAAFR 218
>gi|13476250|ref|NP_107820.1| adenine glycosylase [Mesorhizobium loti MAFF303099]
gi|14027011|dbj|BAB53965.1| adenine glycosylase [Mesorhizobium loti MAFF303099]
Length = 396
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 86/237 (36%), Gaps = 23/237 (9%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTL 51
++K+ + + + L + ++ + EL + + + +
Sbjct: 26 TRKAQTRKAQT-LKAMP-----DDTASRLLAWYDVHHRELPWRVSPREHARGVRPDPYRI 79
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
++ ++ Q+T V + E + + A + + +G Y + +
Sbjct: 80 WLSEVMLQQTTVEAVKSYFRAFVEKWPDVEALAAAPTEDVMKAWAGLGYYSRAR--NLKA 137
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
L+ + P T L LPGIG + I ++AF P VD ++ R+ +R+
Sbjct: 138 CADLVAARGGRFPDTEADLRDLPGIGAYTSAAITAIAFDRPAAVVDGNVERVISRLFSIR 197
Query: 172 GKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++P + ++ G +C R+P+C C + C +
Sbjct: 198 TPLNEAKTEIRALVEAMVPAARPGDFAQAMMDLGATICTPRRPRCMLCPLRENCSAV 254
>gi|218296059|ref|ZP_03496828.1| HhH-GPD family protein [Thermus aquaticus Y51MC23]
gi|218243436|gb|EED09965.1| HhH-GPD family protein [Thermus aquaticus Y51MC23]
Length = 333
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 10/198 (5%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ L + + + ++V+ +L Q+ + + T + +
Sbjct: 6 EALLAWYRKHARPLPWRGEKDPYRILVSEVLLQQTQVRQAIPYYRRFLQRFPTLKALGEA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ + G YR+ + +PQ+ L LPG+G A + S
Sbjct: 66 PLEEVLRVWQGAGYYRRAVHLHRLA------QQVEALPQSFAQLKGLPGLGPYTAAAVAS 119
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-HQYNAHYWLVLHGRYV 205
MAFG VD ++ R+ R+ G +P ++ ++P + H + L+ G V
Sbjct: 120 MAFGERVAAVDGNVRRVLARLFALEGASPKALQGLAQSLMPEEAHPGEWNQALMELGATV 179
Query: 206 CKARKPQCQSCIISNLCK 223
C RKP C +C +++ C+
Sbjct: 180 CLPRKPLCGACPLASRCR 197
>gi|325569858|ref|ZP_08145852.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus ATCC
12755]
gi|325156981|gb|EGC69149.1| A/G-specific adenine glycosylase [Enterococcus casseliflavus ATCC
12755]
Length = 383
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++++ F + K L + + + + ++ ++ Q+ V E
Sbjct: 8 WDEEKIKTFQETFLTWYHKEKRNLPWRATNDPYAIWISEIMLQQTRVETVIGYFYRFMEQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + A E+KL +G Y ++ N+ + + ++ EFD ++PQ++E + L GI
Sbjct: 68 FPTIQDLAAAEEQKLLKVWEGLGYYS-RARNLKAAAQQIVAEFDGEMPQSIEEIRSLKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A I S+AFG+P +D ++ R+ +R+ ++++ II P
Sbjct: 127 GPYTAGAIGSIAFGLPEPAIDGNVMRVVSRLFCIEADIAKASSRRPFDEAMRTIISPDEP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C P+C+ C I C +
Sbjct: 187 GEFNQALMDLGSRICTPTTPKCEECPIGQYCLAYAE 222
>gi|304393523|ref|ZP_07375451.1| A/G-specific adenine glycosylase [Ahrensia sp. R2A130]
gi|303294530|gb|EFL88902.1| A/G-specific adenine glycosylase [Ahrensia sp. R2A130]
Length = 365
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 16/207 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L + + + + ++ ++ Q+T V + I
Sbjct: 22 RLLDWYDRHARTLPWRIPPEQSKAGVRPDPYRVWLSEVMLQQTTVAAVKAYFETFTTIWP 81
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y ++ N+ + + I+ +++ + P+T + L +LPGIG
Sbjct: 82 TVNDLAAAENDDVMSRWAGLGYYA-RARNLKACAEIVTRDYNGRFPETEDELRKLPGIGD 140
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAH 195
A I ++AFG VD +I R+ R P +V + + P +
Sbjct: 141 YTAASIAAIAFGECAAVVDGNIERVLTRHRTISTPLPKAKGEVRAVMAEVTPTDRPGDFA 200
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C ++ P C C ++ C
Sbjct: 201 QAMMDLGATICTSKNPVCGLCPVAQDC 227
>gi|46578698|ref|YP_009506.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448110|gb|AAS94765.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 373
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 81/210 (38%), Gaps = 10/210 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E + + + + L + + + ++ ++ Q+ E
Sbjct: 9 EYDAFAKALLDWFAAARRPLPWREHYTPYGVWISEIMLQQTQMERGVDYYLRWMERFPDV 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ E L +G YR + N+ + + +++ + D P + + LPGIG
Sbjct: 69 ASVATAPEADLLKAWEGLGYYR-RVRNLQAAARVIMEQHDGIFPDLPDAIRALPGIGPYT 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAH 195
A I S+AF I VD ++ R+ +R+ K + R +P + +
Sbjct: 128 AGAIASIAFNHDVIAVDGNVERVFSRVFDIDTPVREKTAATRIRMLTARTLPKGRARDFN 187
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G VC+ +KP C +C ++ C+ +
Sbjct: 188 QALMELGALVCR-KKPDCTACPVARFCESL 216
>gi|301052174|ref|YP_003790385.1| A/G-specific adenine glycosylase [Bacillus anthracis CI]
gi|300374343|gb|ADK03247.1| A/G-specific adenine glycosylase [Bacillus cereus biovar anthracis
str. CI]
Length = 365
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEVVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|284118968|ref|ZP_06386768.1| A/G-specific adenine glycosylase [Candidatus Poribacteria sp.
WGA-A3]
gi|283829447|gb|EFC33821.1| A/G-specific adenine glycosylase [Candidatus Poribacteria sp.
WGA-A3]
Length = 204
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 7/200 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + + + ++V+ ++ Q+ V E T + +
Sbjct: 1 MLKWYDEYGRDLPWRRTADPYRILVSEVMLQQTQVDRVIPKYHEFLEKYPTLKDLAQAEP 60
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ +G + + +++ + + KIP+ E L + GIGR A + + A
Sbjct: 61 DDVRETWYPLGY-NVRPYRLHNIACEAVAHYGGKIPRDSEQLQAMKGIGRYTAGAVRAFA 119
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL---LRIIPPKHQYNAHYWLVLHGRYV 205
F +DT++ R+ +R+ + G + + +IP Y+ + L+ G V
Sbjct: 120 FQEDAPILDTNVMRVLHRVFVGKGDPKTQKTKLWALSEALIPKGKGYDFNQALMDFGAVV 179
Query: 206 CKARKPQCQSCIISNLCKRI 225
C AR P C C + CK
Sbjct: 180 CTARNPYCLYCPMREFCKAY 199
>gi|126460895|ref|YP_001042009.1| A/G-specific adenine glycosylase [Rhodobacter sphaeroides ATCC
17029]
gi|126102559|gb|ABN75237.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides ATCC
17029]
Length = 367
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 16/211 (7%)
Query: 28 IFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
I + + + + + + ++ ++ Q+T V + +
Sbjct: 13 ISARLLAWYDRHARVMPWRVGPAERRAGHRPDPYRVWLSEIMLQQTTVAAVRDYFRRFTD 72
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + A + + +G Y ++ N++ + ++ + P+T +GL LPG
Sbjct: 73 RWPDVEALAAAPDADVMAEWAGLGYYA-RARNLLKGARAVVALHGGRFPETRDGLLSLPG 131
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQY 192
+G A + S+AF P VD ++ R+ +R+ P ++ + + P +
Sbjct: 132 VGPYTAAAVASIAFDEPATVVDGNVERVVSRLFAVETPLPAAKPELTRLAATLTPQERPG 191
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G +C RKP C C + C+
Sbjct: 192 DHAQAMMDLGATICTPRKPVCSLCPLRPDCE 222
>gi|255280199|ref|ZP_05344754.1| A/G-specific adenine glycosylase [Bryantella formatexigens DSM
14469]
gi|255269290|gb|EET62495.1| A/G-specific adenine glycosylase [Bryantella formatexigens DSM
14469]
Length = 365
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 10/213 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T KELE I + + L + + + + V+ ++ Q+ V + E
Sbjct: 1 METNKELESIVQPLLAWFDANARVLPWRDSPTPYRVWVSEIMLQQTRVEAVKPFFQRFTE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A E+KL +G Y + N+ + ++ E+ ++P E L +L G
Sbjct: 61 ALPDVAALAACEEEKLLKLWEGLGYYN-RVRNMQKAAQTVMEEYGGELPADYEKLLKLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKH 190
IG A I S+AF IP VD ++ R+ +RI + +VE + IIPP+
Sbjct: 120 IGSYTAGAIASIAFQIPVPAVDGNVLRVISRITASEKDILKASVKKEVEDEIREIIPPER 179
Query: 191 QYNAHYWLVLHGRYVCKARKP-QCQSCIISNLC 222
+ L+ G VC P +C +C + C
Sbjct: 180 AGAFNQALMELGAVVCVPNGPAKCDACPLYGQC 212
>gi|295091189|emb|CBK77296.1| A/G-specific adenine glycosylase [Clostridium cf. saccharolyticum
K10]
Length = 431
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 10/218 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + L + L + + L + + + ++ ++ Q+ V
Sbjct: 22 PMSRRERLTAVREPLLLWYYENRRVLPWREEPEPYRVWISEIMLQQTRVEAVKPYFARFM 81
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E + + + E+ L +G Y ++ N+ + I + ++ ++P + E L +LP
Sbjct: 82 EALPDVRALAQVEEETLLKLWEGLGYYN-RARNLKKAAQICVEQYGGRLPASYEALLKLP 140
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF + VD ++ R+ +R+ + ++E+ + IIP K
Sbjct: 141 GIGSYTAGAIASIAFQMAEPAVDGNVLRVISRLLESREDIGKQSVKKQMEKDIREIIPEK 200
Query: 190 HQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+ + L+ G VC P C C LC +
Sbjct: 201 RPGDFNQALIELGAIVCTPAGEPLCSRCPFETLCLARR 238
>gi|229068206|ref|ZP_04201513.1| hypothetical protein bcere0025_4220 [Bacillus cereus F65185]
gi|228715020|gb|EEL66888.1| hypothetical protein bcere0025_4220 [Bacillus cereus F65185]
Length = 365
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISIENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|126661732|ref|ZP_01732731.1| endonuclease III [Flavobacteria bacterium BAL38]
gi|126625111|gb|EAZ95800.1| endonuclease III [Flavobacteria bacterium BAL38]
Length = 216
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 105/191 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +++ + + + L + + +TL++AVLLSAQ TDV VN+ T LF AD
Sbjct: 1 MTKSEKVTFVINTLNELYLEIPIPLDHKDPYTLLIAVLLSAQCTDVRVNQITPILFAKAD 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P M+ + +++ IR G+ KS+ I LS ILI ++D +PQ+ E L P +G
Sbjct: 61 NPYDMVKMSVDEIKEIIRPCGLSPMKSKGIYGLSKILIEKYDGIVPQSFEALESFPAVGH 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A+V++S AFG+P VDTHI R+ R GL GK+ + E+ RI P + H +
Sbjct: 121 KTASVVMSQAFGVPAFPVDTHIHRLMYRWGLTNGKSVQQTEKDAKRIFPEACWNDLHLQI 180
Query: 199 VLHGRYVCKAR 209
+ +GR AR
Sbjct: 181 IWYGREYSPAR 191
>gi|32491088|ref|NP_871342.1| hypothetical protein WGLp339 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166295|dbj|BAC24485.1| nth [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 209
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 132/203 (65%), Gaps = 1/203 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++ +F +P+ + EL + ++F L +AVLLS+++ D VN TK+LF A+ P
Sbjct: 5 KVTNVFLRLKKFFPNSRIELKFKSNFELFIAVLLSSRTKDAQVNFVTKNLFSKANNPY-N 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +K++ YI++IG + +K++ I+ +IL+ +F+ KIP + L LPGIGRK ANV
Sbjct: 64 MIKLGEKIKYYIKSIGFFNRKTDFILKSCNILLKKFNGKIPSKRKHLESLPGIGRKSANV 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
IL++AFG TI VDTH+ R+SNRIGL+ VE +L I+P + + + H LVL GR
Sbjct: 124 ILNVAFGFETIAVDTHVLRVSNRIGLSNSNNLRNVENTLDNIVPKEFKISCHSLLVLQGR 183
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
Y+CK+++P C+ C I++LCK K
Sbjct: 184 YICKSKRPNCKICKINDLCKFYK 206
>gi|46445655|ref|YP_007020.1| endonuclease III (UV endonuclease) [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399296|emb|CAF22745.1| probable endonuclease III (UV endonuclease) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 213
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 112/205 (54%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + I + + +P+P L + + +TL++AVLLSA TD VNK T LF+
Sbjct: 3 RKMNKHTIAKNIQRILNELYPAPAVPLSHHDSYTLLIAVLLSAHCTDARVNKVTPILFKK 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A TPQ+M+ + ++++ I + G+ +K+ NI LS LI +++ K+P + E L LPG+
Sbjct: 63 ASTPQEMVKLSINEIESIIHSCGLGFRKATNIWELSDRLIKDYEGKVPASFEALESLPGV 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
G K A+V++S AF VDTHI R + R GL+ GK + E+ L + P K H
Sbjct: 123 GHKTASVVMSQAFQEAAFPVDTHIHRCARRWGLSNGKNVKQTEKDLKSLFPKKDWTRLHL 182
Query: 197 WLVLHGRYVCKARKPQCQSCIISNL 221
++ R C+AR Q C I +
Sbjct: 183 QIIYFAREHCQARSHQTPICPICSW 207
>gi|115526426|ref|YP_783337.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris
BisA53]
gi|115520373|gb|ABJ08357.1| A/G-specific DNA-adenine glycosylase [Rhodopseudomonas palustris
BisA53]
Length = 366
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 86/234 (36%), Gaps = 24/234 (10%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVL 56
++++ S L + L + + + + ++ +
Sbjct: 6 ARQTRSRPAPDRAA-------------LLLGWYDRHARVLPWRAGPGEAADPYRVWLSEI 52
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+T V + + M A ++ +G Y ++ N+ + + +
Sbjct: 53 MLQQTTVKTVGPYFAKFLARWPSVEAMAAASRDEVLQMWAGLGYYS-RARNLHACAVAVA 111
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
E P + GL LPGIG A I ++AFG + VD +I R+ R+ P
Sbjct: 112 QEHGGAFPDSEAGLRALPGIGPYTAAAIAAIAFGRHCMPVDGNIERVVTRLYAIEEALPK 171
Query: 177 ---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+V+ L + ++ L+ G +C +KP C C ++ C +++
Sbjct: 172 AKPQVQALALTLAGSNRAGDSAQALMDLGATICTPKKPACARCPLNADCAALRR 225
>gi|21227382|ref|NP_633304.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905743|gb|AAM30976.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 205
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 2/203 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +E+ +P + F +++ ++S ++ D A K LFE TP++M
Sbjct: 2 DTDELMRRLFELYPD-GCTVDVREPFFALISTVMSHRTRDDVTYPAAKKLFERFSTPEEM 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + ++ IR +G YR K+ I +S IL+ +++ K+P +E L +LPG+GRK AN
Sbjct: 61 VEANVEDIEELIRDVGFYRVKAGRIKEISRILLEDYNGKVPDDMETLLKLPGVGRKTANC 120
Query: 144 I-LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ + VDTH+ RISNR+G K P + E L +++P K+ + + LV G
Sbjct: 121 VLAHAFLKEDALAVDTHVHRISNRLGRVVTKNPEETEMELKKLLPQKYWRHVNILLVKFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+ VC+ P+C CI++++C +I
Sbjct: 181 QNVCRPISPRCGICILNDICPKI 203
>gi|206968464|ref|ZP_03229420.1| A/G-specific adenine glycosylase [Bacillus cereus AH1134]
gi|228951011|ref|ZP_04113132.1| hypothetical protein bthur0006_4420 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229077815|ref|ZP_04210441.1| hypothetical protein bcere0023_5150 [Bacillus cereus Rock4-2]
gi|206737384|gb|EDZ54531.1| A/G-specific adenine glycosylase [Bacillus cereus AH1134]
gi|228705477|gb|EEL57837.1| hypothetical protein bcere0023_5150 [Bacillus cereus Rock4-2]
gi|228808738|gb|EEM55236.1| hypothetical protein bthur0006_4420 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 365
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISVENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|218510492|ref|ZP_03508370.1| A/G-specific adenine glycosylase protein [Rhizobium etli Brasil 5]
Length = 359
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 6 LLDWYDRHHRDLPWRVSPGMAARGVKPDPYRVWLSEVMLQQTTVQAVKPYFERFLARWPE 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P + GL LPGIG
Sbjct: 66 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVAQEHGGVFPDSEAGLKALPGIGDY 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++ + R+ P +
Sbjct: 125 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIETPLPAAKPLMKNKVARLTPADRPGDFAQ 184
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 185 AMMDLGATICTPKRPACSLCPFRVACQALK 214
>gi|162452208|ref|YP_001614575.1| A/G-specific adenine glycosylase [Sorangium cellulosum 'So ce 56']
gi|161162790|emb|CAN94095.1| A/G-specific adenine glycosylase [Sorangium cellulosum 'So ce 56']
Length = 396
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 13/224 (5%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVN 67
G +P + EI + +L + + + + ++ ++ Q+ V
Sbjct: 19 AGATPPAAPDPGERDREIAAALEAWFGRVARDLPWRRTRDPYAIWLSEVMLQQTRVETVI 78
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ T + + + + +G YR ++ + + + D +P+ +
Sbjct: 79 PYYERFLARYPTVFALASAEIDDVLSLWSGLGYYR-RARVLHLAAREVTARHDGALPRDV 137
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---------V 178
L LPG+G A I S+A+ P VD ++ R+ +RI +
Sbjct: 138 SALLALPGVGAYTAGAIASIAYDQPVPLVDGNVARVLSRIEGIDDDIRSASGTRKLWSTA 197
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E+ + H + L+ G VC R P+C +C + C
Sbjct: 198 ERLVRGSADSVHPGRFNQALMELGATVCTPRNPRCDACPVDGAC 241
>gi|149693702|ref|XP_001496280.1| PREDICTED: mutY homolog (E. coli) isoform 1 [Equus caballus]
Length = 519
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 34/258 (13%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELE-----------------EIFYL-FSLKWPSPKGELYY 45
++ S + ++P G +E+E +F + K +L +
Sbjct: 26 ARSSTQAKPSAPNGLARRQEEVELQASVSPYHLFRDTAEVTVFRESLLSWYDREKRDLPW 85
Query: 46 V-------NH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+ + + V+ ++ Q+ V + T Q + + +++
Sbjct: 86 RRQAEGEVDPDRRAYAVWVSEVMLQQTQVATVINYYTRWMQKWPTLQDLASASLEEVNQL 145
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+G Y + + ++ + LPG+GR A I S+AFG T
Sbjct: 146 WAGLGYYSRGRRLLQGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATG 205
Query: 155 GVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
VD ++ R+ R+ + ++ +++ P + + + G VC +
Sbjct: 206 VVDGNVVRVLCRVRAIGADPSSTLVSQQLWSLAQQLVDPTRPGDFNQAAMDLGATVCTPQ 265
Query: 210 KPQCQSCIISNLCKRIKQ 227
+P C C + +LC+ ++
Sbjct: 266 RPLCSQCPLQSLCRARQR 283
>gi|229177045|ref|ZP_04304440.1| hypothetical protein bcere0005_4250 [Bacillus cereus 172560W]
gi|229188724|ref|ZP_04315763.1| hypothetical protein bcere0002_4190 [Bacillus cereus ATCC 10876]
gi|228594913|gb|EEK52693.1| hypothetical protein bcere0002_4190 [Bacillus cereus ATCC 10876]
gi|228606520|gb|EEK63946.1| hypothetical protein bcere0005_4250 [Bacillus cereus 172560W]
Length = 365
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISIENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|229015843|ref|ZP_04172816.1| hypothetical protein bcere0030_4300 [Bacillus cereus AH1273]
gi|229022050|ref|ZP_04178605.1| hypothetical protein bcere0029_4160 [Bacillus cereus AH1272]
gi|228739253|gb|EEL89694.1| hypothetical protein bcere0029_4160 [Bacillus cereus AH1272]
gi|228745442|gb|EEL95471.1| hypothetical protein bcere0030_4300 [Bacillus cereus AH1273]
Length = 365
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +E+ + + +L + + + + V+ ++ Q+ V +
Sbjct: 5 ILNKFNIEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMG 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ +G Y ++ N+ + + + +P ++ + +L G
Sbjct: 65 KFPTLEALANADDEEVLKAWEGLGYYS-RARNLHTAVKEVKEVYGGIVPSDVKKIEKLKG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
+G ILS+A+GIP VD ++ R+ + +A KT E+ + II K+
Sbjct: 124 VGPYTKGAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISAKN 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G +C + P C C + C+ +
Sbjct: 184 PSYFNQGLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|146339051|ref|YP_001204099.1| adenine glycosylase mutY [Bradyrhizobium sp. ORS278]
gi|146191857|emb|CAL75862.1| adenine glycosylase mutY [Bradyrhizobium sp. ORS278]
Length = 364
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 23 LLAWYDRHRRRLPWRAPSGQRSDPYRVWLSEIMLQQTTVKAVGPYFEKFLARWPDVSALG 82
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + + +G Y ++ N+ + + ++ E P T EGL +LPGIG A I
Sbjct: 83 SADLEDVLRMWAGLGYYS-RARNLHACAVTVLREHGGVFPDTEEGLRKLPGIGPYTAAAI 141
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF T+ VD +I R++ R+ P +++ ++ P ++ L+
Sbjct: 142 AAIAFDRQTMPVDGNIERVTTRLFRVEQALPQAKPQIQALAATLLGPSRAGDSAQALMDL 201
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C +KP C C ++ C
Sbjct: 202 GATICTPKKPACSLCPLNEDC 222
>gi|152974276|ref|YP_001373793.1| A/G-specific adenine glycosylase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023028|gb|ABS20798.1| A/G-specific adenine glycosylase [Bacillus cytotoxicus NVH 391-98]
Length = 364
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++ + + +L + + + + V+ ++ Q+ V T +
Sbjct: 11 IKQFQEDLIDWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYAKFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + ++P ++ + +L GIG
Sbjct: 71 ALADAEDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGEVPSDVKKIEKLQGIGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWEDIAKPKTRKIFEDIVREIISIENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|229108127|ref|ZP_04237751.1| hypothetical protein bcere0018_4180 [Bacillus cereus Rock1-15]
gi|228675308|gb|EEL30528.1| hypothetical protein bcere0018_4180 [Bacillus cereus Rock1-15]
Length = 365
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVSEIISVENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|195953263|ref|YP_002121553.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
gi|195932875|gb|ACG57575.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
Length = 225
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
++ ++F + + + + F ++V LLS ++ D + + L
Sbjct: 1 MKKTDIPKVFKILKKDYEENHAPVVTLIAHTTKDPFRVLVCALLSTRTKDETTARVCERL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F + + + I E++L+ I +G Y K++N+ LS IL+ ++ KIP TLE L L
Sbjct: 61 FVKVKSIEDLYNIKEEELKELIYGVGFYNTKAKNLKELSKILVEKYSAKIPNTLEELLEL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+G K AN++L+ FGIP I VD H+ RI+NR L KTP + E++L I+P K+ +
Sbjct: 121 PGVGLKVANLVLAEGFGIPAICVDVHVHRITNRWCLVKTKTPEQTEEALKNILPKKYWID 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ +LV G+ +CK KP C C I C
Sbjct: 181 INRYLVSFGQRICKPIKPSCNICPIERFC 209
>gi|153855015|ref|ZP_01996228.1| hypothetical protein DORLON_02234 [Dorea longicatena DSM 13814]
gi|149752512|gb|EDM62443.1| hypothetical protein DORLON_02234 [Dorea longicatena DSM 13814]
Length = 388
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 10/228 (4%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVN 65
+ + EL I + K +L + + + + V+ ++ Q+
Sbjct: 23 KKDRELQEPKMSSEAELRNIVKPLVNWYRENKRDLPWRHNPDAYRVWVSEIMLQQTRVEA 82
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V + T + + E KL +G Y + N+ + ++ + + P
Sbjct: 83 VKGYYDRFLKALPTVKDLAEAEEDKLLKLWEGLGYYN-RVRNMQKAAQQIMVDHAGRFPD 141
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQ 180
T E + +L GIG A I + A+GIP VD ++ R+ +RI + K+E
Sbjct: 142 TYEEILQLKGIGNYTAGAISAFAYGIPKPAVDGNVLRVISRITGSYEDIMKQSVRKKIES 201
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
+L ++IP + + L+ G VC P+C+ C + C +
Sbjct: 202 ALEQVIPTDAASDFNQGLIELGAIVCVPNGGPKCEQCPVKEYCIAHAE 249
>gi|30018710|ref|NP_830341.1| A/G-specific adenine glycosylase [Bacillus cereus ATCC 14579]
gi|218235065|ref|YP_002365303.1| A/G-specific adenine glycosylase [Bacillus cereus B4264]
gi|229042359|ref|ZP_04190108.1| hypothetical protein bcere0027_4280 [Bacillus cereus AH676]
gi|229125954|ref|ZP_04254979.1| hypothetical protein bcere0015_4180 [Bacillus cereus BDRD-Cer4]
gi|229143245|ref|ZP_04271677.1| hypothetical protein bcere0012_4180 [Bacillus cereus BDRD-ST24]
gi|229148857|ref|ZP_04277105.1| hypothetical protein bcere0011_4280 [Bacillus cereus m1550]
gi|296501283|ref|YP_003662983.1| A/G-specific adenine glycosylase [Bacillus thuringiensis BMB171]
gi|29894251|gb|AAP07542.1| A/G-specific adenine DNA glycosylase [Bacillus cereus ATCC 14579]
gi|218163022|gb|ACK63014.1| A/G-specific adenine glycosylase [Bacillus cereus B4264]
gi|228634651|gb|EEK91232.1| hypothetical protein bcere0011_4280 [Bacillus cereus m1550]
gi|228640326|gb|EEK96724.1| hypothetical protein bcere0012_4180 [Bacillus cereus BDRD-ST24]
gi|228657612|gb|EEL13425.1| hypothetical protein bcere0015_4180 [Bacillus cereus BDRD-Cer4]
gi|228726963|gb|EEL78171.1| hypothetical protein bcere0027_4280 [Bacillus cereus AH676]
gi|296322335|gb|ADH05263.1| A/G-specific adenine glycosylase [Bacillus thuringiensis BMB171]
Length = 365
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISVENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|303232986|ref|ZP_07319666.1| endonuclease III [Atopobium vaginae PB189-T1-4]
gi|302480913|gb|EFL43993.1| endonuclease III [Atopobium vaginae PB189-T1-4]
Length = 250
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
Q + E +PS + L Y + FTL +AVLLSAQ+TD VN
Sbjct: 28 RQKQVKETKRHITARALEFCTRMHAHYPSVQSALNYTDAFTLTIAVLLSAQTTDAAVNSV 87
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
T LF TPQ M ++ IR IG ++ K+ + + + +++N+F +P+T+
Sbjct: 88 TGELFSRWPTPQAMATAPIDSVEQVIRRIGFWKTKARHCVDTARMIVNDFGGTVPRTMAE 147
Query: 130 LTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
LTRLPG+GRK AN++++ I VDTH+FRI+ R+ TP EQ LL IIP
Sbjct: 148 LTRLPGVGRKTANIVMNKAFNNAEGIAVDTHVFRIATRLEFTHAATPLAAEQDLLAIIPR 207
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ N + + GR VC ARKP C +C +LC
Sbjct: 208 ELWCNVNEEWIHFGREVCPARKPHCDTCFERDLCPF 243
>gi|114799676|ref|YP_760615.1| A/G-specific adenine glycosylase [Hyphomonas neptunium ATCC 15444]
gi|114739850|gb|ABI77975.1| A/G-specific adenine glycosylase [Hyphomonas neptunium ATCC 15444]
Length = 347
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 82/219 (37%), Gaps = 13/219 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATK 71
+ + E+ + + L + + + + +A ++ Q+T + +
Sbjct: 1 MTRRSDFRELAAILLAWFDQNARVLPWRAPIGTKRDPYRVWLAEIMLQQTTVPHAAPYFE 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
T + + A ++++ +G Y + + P+T GL
Sbjct: 61 AFTRRWPTVEDLAAAQDEEVMRAWAGLGYYARARNLL---KCAREVAARGGFPETSAGLR 117
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT---PNKVEQSLLRIIPP 188
LPGIG A I ++AFG VD ++ R+ R+ G+ ++ + ++P
Sbjct: 118 ELPGIGPYTAGAIAAIAFGERAAAVDGNVDRVFARLLALKGEWAAEKKRIAAEVAALVPE 177
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + L+ G +C P C C ++ LCK +
Sbjct: 178 ERPGDFAEALMDLGATICTPTSPNCMICPLTGLCKARAE 216
>gi|256841375|ref|ZP_05546882.1| A/G-specific adenine glycosylase [Parabacteroides sp. D13]
gi|256737218|gb|EEU50545.1| A/G-specific adenine glycosylase [Parabacteroides sp. D13]
Length = 365
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 86/217 (39%), Gaps = 9/217 (4%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + EI + + + K EL + + + + ++ ++ Q+ V +
Sbjct: 5 AVMLQYESELEISRILVEWYETYKRELPWRETRDPYIIWISEIILQQTRVVQGLEYFLRF 64
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
E + E ++ Y + +G Y ++ N+ + + ++ F+ P+ + + L
Sbjct: 65 TERFPDVASLAVAEEDEVLKYWQGLGYYS-RARNLHAAAKSIMERFNGVFPENYKEVLSL 123
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
GIG A I+S A+ P VD +++R+ +R+ + + I+ P
Sbjct: 124 KGIGEYTAAAIVSFAWNQPCPVVDGNVYRVLSRLFAVDTPIDTTKGKKQFAELAGMILDP 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+ + ++ G C + P C C + + C
Sbjct: 184 KNAGTHNQAIMELGALQCVPQNPDCGVCPLKDKCVAF 220
>gi|163781957|ref|ZP_02176957.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159883177|gb|EDP76681.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 213
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 114/209 (54%), Gaps = 6/209 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
++ + + + + + + + F +++ LLS ++ D K +
Sbjct: 1 MNRSDIPRVIEILKEHYERWEAPVVTLVAQHTHDPFKVLICALLSTRTRDETTAKVCEKF 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F+ +P+ +L + K+L+ I +G YR K++ + L+ ILI +F ++P+T E L RL
Sbjct: 61 FKKVKSPEDILKLPLKELEELIYPVGFYRNKAKQLKKLAEILIRDFGGEVPKTREELLRL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK AN++L+ + IP I VDTH+ RI+NR L +TP + E+ L+ ++P ++
Sbjct: 121 PGVGRKVANLVLADGYSIPAICVDTHVHRITNRWCLVKTRTPEETEKKLMEVLPEEYWIV 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ LV G+ +C ++P+C C I N C
Sbjct: 181 INRLLVAFGQRICTPQRPRCGECPIENFC 209
>gi|295108313|emb|CBL22266.1| A/G-specific adenine glycosylase [Ruminococcus obeum A2-162]
Length = 352
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 10/210 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L EI + K L + N + V+ ++ Q+ V +
Sbjct: 2 LNEIVQPLISWYRQNKRILPWRDQKNAYYTWVSEIMLQQTRVEAVKPYFLRFIGELPDVK 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL +G Y + N+ + + +++E+ +P + E L L GIG A
Sbjct: 62 ALAECPEEKLMKLWEGLGYYN-RVRNMQNAAQTVVSEYSGILPASYEELLALKGIGSYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+ IP VD ++ R+ +R + +VE+ LL I+P + + +
Sbjct: 121 GAIASIAYDIPVPAVDGNVLRVFSRITEDRQDIMKQSVRRQVEEKLLEIMPKEAPGDFNQ 180
Query: 197 WLVLHGRYVCKARKP-QCQSCIISNLCKRI 225
L+ G VC P +C C I+ C+
Sbjct: 181 ALMELGAVVCVPNGPARCTECPIAEFCRAY 210
>gi|311745197|ref|ZP_07718982.1| A/G-specific adenine glycosylase [Algoriphagus sp. PR1]
gi|126577720|gb|EAZ81940.1| A/G-specific adenine glycosylase [Algoriphagus sp. PR1]
Length = 355
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+Y +L+ + + EL + N + + ++ ++ Q+ +
Sbjct: 2 IYKDSDLQAFSHQILQWYHKNPRELPWRGTQNPYKIWLSEIILQQTRVAQGLPYYEKFLS 61
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + ++++ + +G Y ++ N+ + + + + K P + L L G
Sbjct: 62 HYPTVKDLATAPQEEVLRLWQGLGYYS-RARNLHACAQHIHFDLGGKFPNNYKDLLLLKG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKH 190
+G A+ I S AF P VD ++FR+ R +A K + EQ +IIP K
Sbjct: 121 VGSYTASAIASFAFDEPKAVVDGNVFRVMARYFGIDTDIASSKAKGEFEQLGNKIIPQKD 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G C + P C SC++ + C K
Sbjct: 181 PGEYNQAMMDFGSRQCTPQNPDCPSCLLQSSCFAYK 216
>gi|319654226|ref|ZP_08008315.1| YfhQ protein [Bacillus sp. 2_A_57_CT2]
gi|317394160|gb|EFV74909.1| YfhQ protein [Bacillus sp. 2_A_57_CT2]
Length = 366
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 88/210 (41%), Gaps = 9/210 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + + +L + + + + V+ ++ Q+ V E T
Sbjct: 13 DINGFQDDLLRWFEAEQRDLPWRKDQDPYKVWVSEIMLQQTRVDTVIPYFHRFIEQFPTV 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E+K+ +G Y ++ N+ + + ++ ++P T + ++ L G+G
Sbjct: 73 KDLSEADEEKVLKAWEGLGYYS-RARNLQAAVREVHEKYGGRVPDTPKEISSLKGVGPYT 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
A ILS+A+GIP VD ++ R+ + +A + E S+ ++I K+ + +
Sbjct: 132 AGAILSIAYGIPEPAVDGNVMRVLSRILSIWDDIAKPSSRKIFESSVRKLISHKNPSHFN 191
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G +C P C C + C
Sbjct: 192 QALMELGALICTPTSPSCLLCPVREHCTAF 221
>gi|148698635|gb|EDL30582.1| mutY homolog (E. coli), isoform CRA_b [Mus musculus]
Length = 425
Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 75 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 134
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ Q + + +++ +G Y + ++ +
Sbjct: 135 RWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 194
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 195 LLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLV 254
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 255 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 295
>gi|320166595|gb|EFW43494.1| A/G-specific adenine glycosylase [Capsaspora owczarzaki ATCC 30864]
Length = 582
Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 83/244 (34%), Gaps = 24/244 (9%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH-----------FTLIVA 54
++ S +S G + ++ I + + L + + + V+
Sbjct: 10 QTSSAAPSSRHGPD-SESQVAAIRARLLAWYDANARTLPWRAPPQSKNLTRDRGYDVWVS 68
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++ Q+ V + + + + A +++Q R +G Y + + +
Sbjct: 69 EIMLQQTQVATVIRYYTRWMDSWPSIADLAAATPEQVQEAWRGLGYYSRARRLREAAVKV 128
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL----- 169
E ++PG+G A I S+A+ P VD ++ R+ R+
Sbjct: 129 HRELGGALPRSAKELQAQIPGVGPYTAAAIASIAYNEPVGLVDGNVVRVLTRLFAIGADV 188
Query: 170 ---APGKTPNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
A VE L R++ + + ++ G VC PQC SC + C
Sbjct: 189 AGAAATGRAVPVENILWSIANRLVDATRPGDFNQAMMELGATVCTPTSPQCGSCPLQTEC 248
Query: 223 KRIK 226
+
Sbjct: 249 MAYR 252
>gi|290559317|gb|EFD92652.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 215
Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 1/206 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+++EI + K+ K L + L++A +LSAQ+ D VN T LF
Sbjct: 7 LEQKKVDEIVNILENKYSDIKYYLNFNGSLQLLIAAILSAQTKDTVVNSLTPALFAKYKK 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
L +I+++ K++NI+ I++ ++D K+P +E L LPG+GRK
Sbjct: 67 VSDFAYSKVTDLIPFIKSVSFPENKAKNIVECCKIIMEKYDGKVPDNMEDLLSLPGVGRK 126
Query: 140 GANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
AN IL AFG I VDT + ++S RIGL+ K + +E+ L I K+ N Y L
Sbjct: 127 TANTILINAFGKIEGIPVDTWVIKLSYRIGLSSNKKADDIEKDLKEEIEKKYWKNIAYVL 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
HG +C++ KP+C C I+NLC +
Sbjct: 187 KEHGHRICQSMKPKCDICPINNLCPK 212
>gi|146276122|ref|YP_001166281.1| A/G-specific adenine glycosylase [Rhodobacter sphaeroides ATCC
17025]
gi|145554363|gb|ABP68976.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides ATCC
17025]
Length = 369
Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 87/222 (39%), Gaps = 17/222 (7%)
Query: 21 TPKELEE-IFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVN 67
+P+E+ I + E+ + + + + ++ ++ Q+T V
Sbjct: 7 SPEEVAADISARLLGWYDRHAREMPWRVGPADRRAGVRPDPYRVWLSEIMLQQTTVAAVR 66
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ E + A + ++ +G Y ++ N++ + ++ + + P+T
Sbjct: 67 SYFRRFTERWPDVGALAAAEDAEVMAEWAGLGYYA-RARNLLRGARAVVADHGGRFPETR 125
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLR 184
+GL LPG+G A + ++AF P VD ++ R+ R+ P + +
Sbjct: 126 DGLLTLPGVGPYTAAAVAAIAFDEPATVVDGNVERVVARLFRVETPLPAAKPALTRLAAA 185
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
I P + + ++ G +C RKP C C + C +
Sbjct: 186 ITPQERPGDHAQAMMDLGATICTPRKPVCSLCPLGPDCAARR 227
>gi|85375166|ref|YP_459228.1| endonuclease III [Erythrobacter litoralis HTCC2594]
gi|84788249|gb|ABC64431.1| endonuclease III [Erythrobacter litoralis HTCC2594]
Length = 224
Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Query: 16 LGCLYTPKELEEIFYLFSLKWP----SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ L + ++E +F P + KG + + ++ +LSAQS D N KA +
Sbjct: 1 MARLLSDSDVETVFERLREAMPGRTKNAKGPKGQPDAYRSCISCMLSAQSLDSNTAKAAR 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF +A +P++MLA+ ++ + I+ G+Y K+ NI + L+ E +P T EGL
Sbjct: 61 ALFALATSPEEMLALDDEAIAQAIKPCGLYNMKTRNIRKFNQALLAEHRGVVPDTREGLL 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPGIGRK A++++S FG I VDTH+ R+ NRIGL KT +K + L P
Sbjct: 121 SLPGIGRKCADIVMSFTFGKDVIAVDTHVHRVCNRIGLTDAKTADKTAEQLEERAPRWAH 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H+WL+ G+ VC +R P+C+ C +S+LC +
Sbjct: 181 ADGHFWLIQFGKRVCTSRAPKCERCPVSDLCLWYAE 216
>gi|228956936|ref|ZP_04118717.1| hypothetical protein bthur0005_4740 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228802779|gb|EEM49615.1| hypothetical protein bthur0005_4740 [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 365
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEEEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGVVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISVENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|288555177|ref|YP_003427112.1| A/G-specific DNA adenine glycosylase [Bacillus pseudofirmus OF4]
gi|288546337|gb|ADC50220.1| A/G-specific DNA adenine glycosylase [Bacillus pseudofirmus OF4]
Length = 362
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + + L + + + + V+ ++ Q+ V + T +
Sbjct: 11 ISQFQQDLINWFKENQRTLPWRENKDPYRVWVSEIMLQQTRVDTVIPYYLNFMREFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G Y + N+ + ++ E++ +P TL+ ++ L G+G A
Sbjct: 71 DLAYAEEDRILKAWEGLGYYS-RVRNLQTAVREVVEEYNAAVPDTLKEISALKGVGPYTA 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ P VD ++ R+ +R+ +A KT E + +I + + +
Sbjct: 130 GAILSIAYAKPEPAVDGNVMRVLSRVLEIDEDIAKAKTRKTFEAIIYDLISKEDPSSFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P C C + C +
Sbjct: 190 GLMELGALICTPTSPGCLLCPVREHCMAYNK 220
>gi|255744793|ref|ZP_05418744.1| A/G-specific adenine glycosylase [Vibrio cholera CIRS 101]
gi|262151312|ref|ZP_06028447.1| A/G-specific adenine glycosylase [Vibrio cholerae INDRE 91/1]
gi|255737824|gb|EET93218.1| A/G-specific adenine glycosylase [Vibrio cholera CIRS 101]
gi|262030928|gb|EEY49557.1| A/G-specific adenine glycosylase [Vibrio cholerae INDRE 91/1]
Length = 182
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 130/177 (73%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
+++AVLLSAQ+TDV+VNKAT L+ +A+TPQ ML +G ++ YI+TIG++ K+EN+I
Sbjct: 1 MLIAVLLSAQATDVSVNKATDKLYAVANTPQTMLDLGVDGVKEYIKTIGLFNSKAENVIK 60
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
IL+ + ++P+ E L LPG+GRK ANV+L+ AFG PTI VDTHIFR+SNR A
Sbjct: 61 TCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTKFA 120
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GK ++VE LL+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 121 VGKNVDEVEHKLLKVVPNEFKLDVHHWLILHGRYTCVARKPRCGSCIIEDLCEFKDK 177
>gi|89052886|ref|YP_508337.1| A/G-specific DNA-adenine glycosylase [Jannaschia sp. CCS1]
gi|88862435|gb|ABD53312.1| A/G-specific DNA-adenine glycosylase [Jannaschia sp. CCS1]
Length = 345
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 80/208 (38%), Gaps = 13/208 (6%)
Query: 32 FSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ +L + + + + ++ ++ Q+T V + + T
Sbjct: 1 MLDWYDVHARDLPWRVPPLSGLDADPYRVWLSEIMLQQTTVAAVKAYFQRFTALWPTVGD 60
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + + +G Y ++ N++ + +++ E + P+T L LPGIG A
Sbjct: 61 LAAAEDAAVMGEWAGLGYYA-RARNLLKCARVVVEEHGGQFPRTEAELLELPGIGPYTAA 119
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSLL-RIIPPKHQYNAHYWLV 199
+ S+AF P +D +I R+ R+ P V + R+ P + L+
Sbjct: 120 AVASIAFQQPAPVMDGNIERVMARLFAVEDPLPGCKSVLKEHATRLTPNDRPGDHAQALM 179
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C + P C C + C K+
Sbjct: 180 DLGATICTPKNPACGICPVMEACTAHKR 207
>gi|163938449|ref|YP_001643333.1| A/G-specific adenine glycosylase [Bacillus weihenstephanensis
KBAB4]
gi|229009942|ref|ZP_04167161.1| hypothetical protein bmyco0001_4120 [Bacillus mycoides DSM 2048]
gi|163860646|gb|ABY41705.1| A/G-specific adenine glycosylase [Bacillus weihenstephanensis
KBAB4]
gi|228751373|gb|EEM01180.1| hypothetical protein bmyco0001_4120 [Bacillus mycoides DSM 2048]
Length = 365
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALATADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGTVPSDVKKIEKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISIENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|229918134|ref|YP_002886780.1| A/G-specific adenine glycosylase [Exiguobacterium sp. AT1b]
gi|229469563|gb|ACQ71335.1| A/G-specific adenine glycosylase [Exiguobacterium sp. AT1b]
Length = 344
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 9/218 (4%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
L L+T + + K +L + N + + V+ ++ Q+ V
Sbjct: 4 LDKLFTNYNIHHFNEELVTWFNREKRDLPWRHAKNPYRVWVSEVMLQQTRVDTVIPYYNR 63
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
E T + + A ++ Y +G Y + N+ + + ++ +P+ E +
Sbjct: 64 FMERFPTLEDLAAADTDEVVKYWEGLGYYS-RVRNLHEAVKEVASVYEGIVPEEKERFEK 122
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIP 187
L G+G +LS+A+ P VD ++ R+ + +A KT EQ + R++
Sbjct: 123 LKGVGPYTTGAVLSIAYNQPEPAVDGNVMRVMSRQFGIYDDIAMPKTRKIFEQVVRRLMD 182
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P H + + ++ G VC + P C C + + C
Sbjct: 183 PAHASDFNEGVMELGATVCTPKNPMCSLCPVQDTCYAY 220
>gi|160902834|ref|YP_001568415.1| endonuclease III [Petrotoga mobilis SJ95]
gi|160360478|gb|ABX32092.1| endonuclease III [Petrotoga mobilis SJ95]
Length = 210
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 117/205 (57%), Gaps = 7/205 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
KE E+I +P E + F +++ +LS ++ D N KA+K LF
Sbjct: 6 KKEAEKIIN----MFPRSNSE---TDPFKVLIETVLSQRTKDENTEKASKSLFSCYTNVF 58
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ + + L + I+ G+Y++KSE II++S ILI +++ K+P LE L LPG+GRK A
Sbjct: 59 EISKLNPQDLYDLIKPAGMYKQKSERIINISKILIEKYNGKVPDELEELIELPGVGRKTA 118
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
N++L ++FG + VDTH+ RISNR+G KTP + E+ L +IIP + + +V
Sbjct: 119 NIVLYVSFGKEALAVDTHVHRISNRLGWVKTKTPEETEEQLKKIIPSELWGPLNGSMVNF 178
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G+ +CK P+C C ++ +C +
Sbjct: 179 GQKICKPISPKCDECFLNEVCPAKQ 203
>gi|119775623|ref|YP_928363.1| A/G-specific adenine glycosylase [Shewanella amazonensis SB2B]
gi|119768123|gb|ABM00694.1| A/G-specific DNA-adenine glycosylase [Shewanella amazonensis SB2B]
Length = 368
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 10/204 (4%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + L + + + V+ ++ Q+ V + T +
Sbjct: 12 KRIVLWYDKHGRKSLPWQQNKTPYKVWVSEIMLQQTQVATVIPYFERFMASFPTVNDLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ ++ +G Y ++ N+ + ++ +E + P + + LPGIGR A +L
Sbjct: 72 AHEDEVLHHWTGLGYYA-RARNLHKAAQLIRDEHGGEFPTEFDAVLALPGIGRSTAGAVL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVL 200
S++ G +D ++ R+ R G G K + Q + P + + ++
Sbjct: 131 SLSLGQHHPILDGNVKRVLARHGAIEGWPGEKRVDTALWQLTEALTPKEDIQKYNQAMMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G +C +P+C C ++ CK
Sbjct: 191 MGANICTRSRPKCGECPVAIDCKA 214
>gi|222085160|ref|YP_002543690.1| A/G-specific adenine glycosylase [Agrobacterium radiobacter K84]
gi|221722608|gb|ACM25764.1| A/G-specific adenine glycosylase [Agrobacterium radiobacter K84]
Length = 362
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 78/209 (37%), Gaps = 16/209 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V T
Sbjct: 13 LLAWYDRHHRDLPWRISPPMAARGIRPDPYHIWLSEVMLQQTTVPAVKAYFAKFLARWPT 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E + P T +GL LPGIG
Sbjct: 73 VGDLAAAPTDDVMAAWAGLGYYA-RARNLKKCAEAVAAEHGGRFPDTEDGLRALPGIGDY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++Q + + P +
Sbjct: 132 TAAAVAAIAFNRQAAVMDGNVERVISRLYAISTPLPAGKPLMKQKVALLTPADRPGDFAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C ++P C C +N C+ +
Sbjct: 192 AMMDLGATICTPKRPACALCPFNNACEAL 220
>gi|150008608|ref|YP_001303351.1| A/G-specific adenine glycosylase [Parabacteroides distasonis ATCC
8503]
gi|255014406|ref|ZP_05286532.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_7]
gi|149937032|gb|ABR43729.1| A/G-specific adenine glycosylase [Parabacteroides distasonis ATCC
8503]
Length = 359
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 86/215 (40%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + EI + + + K EL + + + + ++ ++ Q+ V + E
Sbjct: 1 MLQYESELEISRILVEWYETYKRELPWRETRDPYIIWISEIILQQTRVVQGLEYFLRFTE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ E ++ Y + +G Y ++ N+ + + ++ F+ P+ + + L G
Sbjct: 61 RFPDVASLAVAEEDEVLKYWQGLGYYS-RARNLHAAAKSIMERFNGVFPENYKEVLSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKH 190
IG A I+S A+ P VD +++R+ +R+ + + I+ PK+
Sbjct: 120 IGEYTAAAIVSFAWNQPCPVVDGNVYRVLSRLFAVDTPIDTTKGKKQFAELAGMILDPKN 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G C + P C C + + C
Sbjct: 180 AGTHNQAIMELGALQCVPQNPDCGVCPLKDKCVAF 214
>gi|262167232|ref|ZP_06034944.1| A/G-specific adenine glycosylase [Vibrio cholerae RC27]
gi|262024376|gb|EEY43065.1| A/G-specific adenine glycosylase [Vibrio cholerae RC27]
Length = 182
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 130/177 (73%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
+++AVLLSAQ+TDV+VNKAT L+ +A+TPQ ML +G ++ YI+TIG++ K+EN+I
Sbjct: 1 MLIAVLLSAQATDVSVNKATDKLYAVANTPQAMLDLGVDGVKEYIKTIGLFNSKAENVIK 60
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
IL+ + ++P+ E L LPG+GRK ANV+L+ AFG PTI VDTHIFR+SNR A
Sbjct: 61 TCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTKFA 120
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GK ++VE LL+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 121 VGKNVDEVEHKLLKVVPNEFKLDVHHWLILHGRYTCVARKPRCGSCIIEDLCEFKDK 177
>gi|47215176|emb|CAG01442.1| unnamed protein product [Tetraodon nigroviridis]
Length = 427
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K EL + + + V+ ++ Q+ V + T
Sbjct: 28 LLAWYDREKRELPWRTLAATVSDVNIRIYAVWVSEIMLQQTQVATVIDYYNKWMKRWPTV 87
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + A +++ +G Y + ++ L +LPG+GR
Sbjct: 88 QDLAAATLEEVNQMWAGLGYYSRGKRLHDGAQKVVSQLQGQMPRTVDALLKQLPGVGRYT 147
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSL---LRIIPPKHQYNAH 195
A + S+A G T VD ++ R+ R+ P E R++ P + +
Sbjct: 148 AGAVGSIALGQVTGAVDGNVIRVLCRLRAIGADCTGPVVTEALWSLANRLVDPDRPVDFN 207
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C + C C + C+ +
Sbjct: 208 QAMMELGARICTPKGALCSQCPVQPHCRSYHR 239
>gi|331091624|ref|ZP_08340458.1| hypothetical protein HMPREF9477_01101 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403381|gb|EGG82940.1| hypothetical protein HMPREF9477_01101 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 586
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQST 62
K DS + + ++L+EI + K +L + + + + V+ ++ Q+
Sbjct: 212 KKDSISLYKEVPVILEQEQLKEIVQPIVSWYRENKRQLAWRENVSAYRVWVSEIMLQQTR 271
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + T + + E KL +G Y + N+ + ++ EF +
Sbjct: 272 VEAVKPFYDRFLKELPTVKDLAEAEEDKLLKLWEGLGYYN-RVRNMQKAAVQVMEEFHGE 330
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----K 177
P+T E + L GIG A I S A+GIP VD ++ R+ +R+ + K
Sbjct: 331 FPKTYEEVLSLSGIGNYTAGAICSFAYGIPKPAVDGNVLRVISRVIASEEDIMKPAVRTK 390
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
+E L +IP + + L+ G +C + +C+ C + ++C+ K+
Sbjct: 391 IEYMLDGVIPKDSASDFNQGLIELGALICTPKGMAKCEKCPLGSVCQAKKE 441
>gi|328957367|ref|YP_004374753.1| endonuclease III [Carnobacterium sp. 17-4]
gi|328673691|gb|AEB29737.1| endonuclease III [Carnobacterium sp. 17-4]
Length = 212
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + ++ +P EL + N F L++AV+LSAQ+TDV+VNK T LF
Sbjct: 1 MLPKTQTIQMIEAMGNLFPHATCELVHKNAFELLIAVMLSAQTTDVSVNKITPELFRKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ L + + ++TIG+YR K++ I LI+EF+ +P L LPG+GR
Sbjct: 61 TPEAFLDAPVEDIMEQLKTIGLYRNKAKFIKGCCRKLIDEFNGMVPNKRSELESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF +P I VDTH+ R++ R+G+ P K T +VE+ L++ +P + AH+
Sbjct: 121 KTANVVLSVAFNLPAIAVDTHVERVTKRLGICPPKATVREVEEILMQQLPKELWSIAHHR 180
Query: 198 LVLHGRYVCKARKPQCQSCI 217
L+ GRY C AR CI
Sbjct: 181 LIFFGRYQCTARNHDHDICI 200
>gi|301309506|ref|ZP_07215448.1| A/G-specific adenine glycosylase [Bacteroides sp. 20_3]
gi|300832595|gb|EFK63223.1| A/G-specific adenine glycosylase [Bacteroides sp. 20_3]
Length = 359
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 87/215 (40%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + EI + + + K EL + + + + ++ ++ Q+ V + E
Sbjct: 1 MLQYESELEISRILVEWYETYKRELPWRETRDPYIIWISEIILQQTRVVQGLEYFLRFTE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A E ++ Y + +G Y ++ N+ + + ++ F+ P+ + + L G
Sbjct: 61 RFPDVASLAAAEEDEVLKYWQGLGYYS-RARNLHAAAKSIMERFNGVFPENYKEVLSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKH 190
IG A I+S A+ P VD +++R+ +R+ + + I+ PK+
Sbjct: 120 IGEYTAAAIVSFAWNQPCPVVDGNVYRVLSRLFAVDTPIDTTKGKKQFAELAGMILDPKN 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G C + P C C + + C
Sbjct: 180 AGTHNQAIMELGALQCVPQNPDCGVCPLKDKCMAF 214
>gi|163739873|ref|ZP_02147280.1| A/G-specific adenine glycosylase [Phaeobacter gallaeciensis BS107]
gi|161386907|gb|EDQ11269.1| A/G-specific adenine glycosylase [Phaeobacter gallaeciensis BS107]
Length = 357
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 16/207 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L + + + + ++ ++ Q+T V
Sbjct: 14 ILLEWYDQHARSLPWRISPADRAAGVWPDPYRIWLSEVMLQQTTVAAVKDYFHRFTSRWP 73
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y ++ N++ + ++ ++ P T +GL LPGIG
Sbjct: 74 TVADLAAAPDADVMAEWAGLGYYA-RARNLLKCARVVAQDYGGIFPNTYDGLIALPGIGP 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAH 195
A I ++AF +D ++ R+ R+ P ++++ + P + +
Sbjct: 133 YTAAAISAIAFNRQETVLDGNVERVMARLYDVHVPLPTAKPQLKEKAAALTPAERPGDHA 192
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 193 QAVMDLGATICTPRNPACGICPWRTPC 219
>gi|332994862|gb|AEF04917.1| A/G-specific adenine glycosylase [Alteromonas sp. SN2]
Length = 353
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWP-SPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + V+ ++ Q+ V + + + ++
Sbjct: 12 ERVLAWYDIHGRKHLPWQQDITPYKVWVSEIMLQQTQVTTVIPYFERFMQSFPSVVELAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + ++ +G Y ++ N+ + ++ + P ++ + LPGIGR A +L
Sbjct: 72 AAQDDVLHHWTGLGYYA-RARNLHKAAKQIVEDHGGTFPDNIDDVIALPGIGRSTAGAVL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVL 200
S++ +D ++ R+ R G VE +L + P K N ++
Sbjct: 131 SISRNQRHPILDGNVKRVLARYYAIGGWPGQKAVENALWEVAEKNTPEKRSANYTQVMMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC KP+C C + + C Q
Sbjct: 191 LGAMVCTRSKPKCDECPLQHDCLAYAQ 217
>gi|283795507|ref|ZP_06344660.1| A/G-specific adenine glycosylase [Clostridium sp. M62/1]
gi|291077172|gb|EFE14536.1| A/G-specific adenine glycosylase [Clostridium sp. M62/1]
Length = 412
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 10/218 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + L + L + + L + + + ++ ++ Q+ V
Sbjct: 22 PMSRRERLTAVREPLLLWYYENRRVLPWREEPEPYRVWISEIMLQQTRVEAVKPYFARFM 81
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E + + + E+ L +G Y ++ N+ + I + ++ ++P + E L +LP
Sbjct: 82 EALPDVRALAQVEEETLLKLWEGLGYYN-RARNLKKAAQICVEQYGGRLPASYEALLKLP 140
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF + VD ++ R+ +R+ + ++E+ + IIP K
Sbjct: 141 GIGSYTAGAIASIAFQMAEPAVDGNVLRVISRLLESREDIGKQSVKKQMEKEIREIIPEK 200
Query: 190 HQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+ + L+ G VC P C C LC +
Sbjct: 201 RPGDFNQALIELGAIVCTPAGEPLCSRCPFETLCLARR 238
>gi|149508037|ref|XP_001519000.1| PREDICTED: similar to mutY homolog (E. coli) [Ornithorhynchus
anatinus]
Length = 605
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 78/221 (35%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSAQSTDVNVNKATK 71
E+ + K +L + + + + V+ ++ Q+ V
Sbjct: 83 AEVGAFRSRLLTWYDRAKRDLPWRRRAASEPDPDRRAYAVWVSEIMLQQTQVATVIDYYN 142
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T ++ +++ +G Y + +++ + E
Sbjct: 143 RWMQKWPTLPELAGASLEEVNQMWAGLGYYSRGRRLQEGAHKVMVELGGHVPRTAEELRK 202
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRII 186
LPG+G+ A I S+AFG T VD ++ R+ R+ + ++ R++
Sbjct: 203 LLPGVGKYTAGAIASIAFGQVTSVVDGNVIRVLCRLRGIGADPSSPVVSQQLWSLAQRLV 262
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + + + G VC R P C C + LC ++
Sbjct: 263 DPQRPGDFNQASMELGAIVCTPRAPLCSECPVRELCWARQK 303
>gi|15613494|ref|NP_241797.1| adenine glycosylase [Bacillus halodurans C-125]
gi|10173546|dbj|BAB04650.1| adenine glycosylase [Bacillus halodurans C-125]
Length = 372
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 83/210 (39%), Gaps = 9/210 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + EL + + + + V+ ++ Q+ V + T
Sbjct: 9 DISTFQNDLVTWFSNHYRELPWRENKDPYRVWVSEIMLQQTRVDTVIPYYQAFMRQFPTL 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E ++ +G Y ++ N+ S ++ + ++P T + +++L G+G
Sbjct: 69 ETLAYAEEDQVLKAWEGLGYYS-RARNLQSAVREVVESYGGEVPSTRKEISKLKGVGPYT 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAH 195
A ILS+A+ P VD ++ R+ +R+ E L +I ++ +
Sbjct: 128 AGAILSIAYDQPEPAVDGNVMRVLSRVLYIEEDIAKVKTRTLFESLLYDLISKENPSFFN 187
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G VC P C C + + C+
Sbjct: 188 QGLMELGALVCTPTSPGCLLCPVRDHCRAF 217
>gi|298376096|ref|ZP_06986052.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_19]
gi|298267133|gb|EFI08790.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_19]
Length = 370
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 86/217 (39%), Gaps = 9/217 (4%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + EI + + + K EL + + + + ++ ++ Q+ V +
Sbjct: 5 AVMLQYESELEISRILVEWYETYKRELPWRETRDPYIIWISEIILQQTRVVQGLEYFLRF 64
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
E + E ++ Y + +G Y ++ N+ + + ++ F+ P+ + + L
Sbjct: 65 TERFPDVASLAVAEEDEVLKYWQGLGYYS-RARNLHAAAKSIMERFNGVFPENYKEVLSL 123
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
GIG A I+S A+ P VD +++R+ +R+ + + I+ P
Sbjct: 124 KGIGEYTAAAIVSFAWNQPCPVVDGNVYRVLSRLFAVDTPIDTTKGKKQFAELAGMILDP 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+ + ++ G C + P C C + + C
Sbjct: 184 KNAGTHNQAIMELGALQCVPQNPDCGVCPLKDKCVAF 220
>gi|320354382|ref|YP_004195721.1| A/G-specific DNA-adenine glycosylase [Desulfobulbus propionicus DSM
2032]
gi|320122884|gb|ADW18430.1| A/G-specific DNA-adenine glycosylase [Desulfobulbus propionicus DSM
2032]
Length = 368
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 90/219 (41%), Gaps = 12/219 (5%)
Query: 19 LYTPKELEEIFY---LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + EI + + + L + + + + ++ ++ Q+ V
Sbjct: 1 MIDKENTAEIADFQQRLLHWFEAHQRPLPWRATYDPYHVWISEIMGQQTQMERVALYFTR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + E+ + +G Y ++ NI + +L+ + +IPQ + L +
Sbjct: 61 WIDQFPDIAAVAEAEEQAILKAWEGLGYYS-RARNIQRTARLLLADGKPEIPQDTQQLLK 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIP 187
LPGIG A ILS+AF +P D ++ R+ R L T +++ R++
Sbjct: 120 LPGIGPYTAAAILSIAFNLPHPLRDANVERLFARLADIDRPLKQRPTQHRLAVLAERLLD 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ N + L+ G VC +KP C +C + C+ +
Sbjct: 180 RENPRNYNQALMELGALVCTPKKPACTACPVQIHCRAHR 218
>gi|163791074|ref|ZP_02185494.1| probable endonuclease III (DNA repair) [Carnobacterium sp. AT7]
gi|159873630|gb|EDP67714.1| probable endonuclease III (DNA repair) [Carnobacterium sp. AT7]
Length = 212
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K ++ +P EL + N F L++AV+LSAQ+TDV VNK T LFE
Sbjct: 1 MLSKKRTIQMIEAMGELFPHAACELTHKNAFELLIAVMLSAQTTDVAVNKITPALFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ LA + + ++TIG+YR K++ I LI +F+ K+P L LPG+GR
Sbjct: 61 TPEAFLAAPVEDIMERLKTIGLYRNKAKFIKGCCQKLITDFNGKVPCNRMDLESLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS+AF +P I VDTH+ R++ R+G+ P T +VE+ L++ +P AH+
Sbjct: 121 KTANVVLSVAFNVPAIAVDTHVERVTKRLGICPPNATVREVEEILMKQLPENMWSVAHHR 180
Query: 198 LVLHGRYVCKARKPQCQSC 216
L+ GRY C AR C
Sbjct: 181 LIFFGRYQCIARNHDHTIC 199
>gi|149177887|ref|ZP_01856485.1| A/G-specific adenine glycosylase [Planctomyces maris DSM 8797]
gi|148843227|gb|EDL57592.1| A/G-specific adenine glycosylase [Planctomyces maris DSM 8797]
Length = 408
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 9/210 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + S + +L + + + ++ ++ Q+ V K
Sbjct: 12 RRQKFRRQLQSWYVSHQRDLPWRRQHDPHAVWISEIMLQQTVVAAVIPYFKRFMSRFPDV 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + A E ++ + +G Y ++ NI + + E + + P+ +E L +LPGIGR
Sbjct: 72 ETLAAADESEVLQHWEGLGYYS-RARNIHKAAKRIAGELEGRFPRDVESLQKLPGIGRYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAH 195
A I S A+ V+ + R+ +R+ N++ + I+P K +
Sbjct: 131 AGAICSFAYDTRAPIVEANTLRLYSRLIGLEEDPRSKSGQNQLWEFAELILPRKSPGEFN 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G VC + P C+ C ++ C+
Sbjct: 191 QALMDLGSLVCTPQNPGCEDCPVNAGCEAF 220
>gi|327271065|ref|XP_003220308.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Anolis
carolinensis]
Length = 465
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 78/221 (35%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
E+++ + K +L + + + V+ ++ Q+ +V
Sbjct: 52 AEIKDFRKRLLTWYNKCKRDLPWRKMATSETDADRRAYAVWVSEIMLQQTQVASVISYYN 111
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q++ +++ +G Y + ++ + E
Sbjct: 112 RWMQKWPTLQELAKASLEEVNELWSGLGYYSRGKRLQEGARKVVSQMAGHMPRTAEELQK 171
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+G+ A + S+AFG T VD ++ R+ R +++ ++
Sbjct: 172 LLPGVGKYTAGAVASIAFGQVTGVVDGNVIRVLCRARAIGADPTSSAVADRLWALANSLV 231
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P H + + ++ G VC + P C C + C+ +
Sbjct: 232 DPTHPGDFNQAMMELGATVCTPKTPLCTECPVKQHCRAYHR 272
>gi|192293337|ref|YP_001993942.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris TIE-1]
gi|192287086|gb|ACF03467.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris TIE-1]
Length = 349
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+T V T
Sbjct: 6 AALLAWYDRHRRTLPWRAPPGATADPYAVWLSEIMLQQTTVRAVGPYFDKFMARWPTVTA 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G Y ++ N+ + + + + + P T EGL LPG+G A
Sbjct: 66 LGEASLDDVLKMWAGLGYYS-RARNLHACAVAVTRQHGGRFPDTEEGLRALPGVGPYTAA 124
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AF T+ VD +I R+ +R+ + P ++ ++ P ++ L+
Sbjct: 125 AIAAIAFSRRTMPVDGNIERVVSRLYAVEDELPKAKPRIKALAETLLGPSRAGDSAQALM 184
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C + C
Sbjct: 185 DLGATICTPKKPACALCPLMQGC 207
>gi|170747152|ref|YP_001753412.1| A/G-specific adenine glycosylase [Methylobacterium radiotolerans
JCM 2831]
gi|170653674|gb|ACB22729.1| A/G-specific adenine glycosylase [Methylobacterium radiotolerans
JCM 2831]
Length = 464
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 12/203 (5%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 37 LLAWYDRHRRVLPWRALAGAAPDPYRIWLSEVMLQQTTIAAVRPYFERFLTRFPDIFALA 96
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+ + + +G Y + + + + P T EGL +LPGIG A I
Sbjct: 97 EAPEEAVMSAWAGLGYYSRAR--NLHACARTVAAAGGRFPDTAEGLRKLPGIGAYTAGAI 154
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF VD ++ R+ +R P ++ + ++P + L+
Sbjct: 155 AAIAFDRQEAAVDGNVERVLSRAYAVEAPLPGSRPEIRRLTQALVPTDRPGDFAQALMDL 214
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C ++P C C C+
Sbjct: 215 GATICTPKRPACALCPWMRPCRA 237
>gi|312115737|ref|YP_004013333.1| A/G-specific adenine glycosylase [Rhodomicrobium vannielii ATCC
17100]
gi|311220866|gb|ADP72234.1| A/G-specific adenine glycosylase [Rhodomicrobium vannielii ATCC
17100]
Length = 390
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 14/213 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
E + + +L + + + + ++ ++ Q+T V +
Sbjct: 21 AESFQRALLRWYDVARRDLPWRAKPGELADPYRVWLSEIMLQQTTVKAVIPYFEAFTRRW 80
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + ++ +G Y + P GL LPG+G
Sbjct: 81 PTVDALADASRDEVLAAWAGLGYYSRARNLHA----CAQALAQGGFPADEVGLRALPGVG 136
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNA 194
+ I ++AF +P VD ++ R+ R+ P ++ + + P +
Sbjct: 137 AYTSAAIAAIAFDLPAAVVDGNVERVLARVFALETPLPAAKGELRKLAAELTPASRPGDY 196
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C R P C C + C +
Sbjct: 197 AQAMMDLGAGICSPRSPSCLVCPVRAFCAAAAK 229
>gi|221129101|ref|XP_002159248.1| PREDICTED: similar to mutY homolog, partial [Hydra magnipapillata]
Length = 424
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
+ V+ ++ Q+ V + + + + + +++ +G Y + +
Sbjct: 88 VWVSEIMLQQTQVATVINYYNNWMKKWPSIASLASATLEEVNEAWSGLGYYS-RGRRLHE 146
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ LI + + LPGIG A+ I S+AF VD ++ R+ RI +
Sbjct: 147 AAKKLIESGQPMPKSSKSLVKELPGIGPYTASAIASIAFNEVCGVVDGNVIRVLTRIRMI 206
Query: 171 PGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +K + + I+ + + + ++ G VC + PQC C +S LC
Sbjct: 207 GADSSSKAVNDFIWELANTIVDEERPGDFNQGMMELGATVCTPKSPQCSQCPLSTLCMSY 266
Query: 226 KQ 227
K+
Sbjct: 267 KK 268
>gi|95928413|ref|ZP_01311161.1| A/G-specific adenine glycosylase [Desulfuromonas acetoxidans DSM
684]
gi|95135684|gb|EAT17335.1| A/G-specific adenine glycosylase [Desulfuromonas acetoxidans DSM
684]
Length = 358
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 87/217 (40%), Gaps = 9/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ P + EL + + + + ++ ++ Q+ V + +
Sbjct: 1 MTDPVNAAVFQQRLLAWYDRCGRELPWRLSRDPYRIWLSEVMLQQTGVQAVIPYFERFVD 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + + +G Y ++ N+ + + + F + P +++ L LPG
Sbjct: 61 QFPDVESLASAPLDAVIELWAGLGYYS-RARNLHAAAQKVCEAFQGQFPHSVDALMTLPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKH 190
+GR A I ++AF + +D ++ R R+ ++ Q ++ P +H
Sbjct: 120 VGRSTAGAIRAIAFDRYGVILDGNVRRGLCRLFAWQDDPRSSAAEKQLWQWAAQLTPQQH 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ ++ G +C R+P C +C + +LC+ +Q
Sbjct: 180 CHDYAQAIMDFGATLCTPRQPNCVACPMISLCQGYQQ 216
>gi|46907920|ref|YP_014309.1| A/G-specific adenine glycosylase [Listeria monocytogenes serotype
4b str. F2365]
gi|46881189|gb|AAT04486.1| A/G-specific adenine glycosylase [Listeria monocytogenes serotype
4b str. F2365]
Length = 362
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 66 FPTMEDFVQADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I ++
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDKENP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 219
>gi|304393060|ref|ZP_07374989.1| endonuclease III [Ahrensia sp. R2A130]
gi|303294825|gb|EFL89196.1| endonuclease III [Ahrensia sp. R2A130]
Length = 227
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWP----SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
L P+E+EE++ S P + KG N F V+ +LSAQS D N A++ L
Sbjct: 12 KLLKPREIEELYRTLSEVMPGRTPTAKGPKKQPNPFRSCVSCMLSAQSRDANTAAASQAL 71
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +ADTP+ +LA+ ++ + I+ G+Y K+ N+ + +++E IP T EGL +
Sbjct: 72 FALADTPEGILALSDEDVAAAIKPCGLYNMKTRNLKKMCAFVVDELKGDIPATREGLMTI 131
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PGIGRK A++++S FG I VDTH+ R+SNR GLA GKT SL P +
Sbjct: 132 PGIGRKCADIVMSFTFGEDVIAVDTHVHRVSNRTGLAQGKTEAHTATSLEERSPKWALRD 191
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H+WL+ G+ VC +R P+C C ++++CK
Sbjct: 192 GHFWLLQFGKKVCTSRAPKCPDCPVNHICKAY 223
>gi|300779155|ref|ZP_07089013.1| A/G-specific adenine glycosylase [Chryseobacterium gleum ATCC
35910]
gi|300504665|gb|EFK35805.1| A/G-specific adenine glycosylase [Chryseobacterium gleum ATCC
35910]
Length = 359
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 82/213 (38%), Gaps = 8/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T E I + + +L + + + + + ++ Q+ + +
Sbjct: 20 KTASEFLHIGNRLLEWYRNNARDLPFRQTKDPYKIWICEIVFQQTRINQGLNHYNNFIKR 79
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + E ++ Y + +G Y + NI + ++N++ P E + +L G+
Sbjct: 80 FPDVKTLAEADENEVLLYWKGLGYYSRAI-NIHKAAQQIMNDYQGVFPHQYEEILKLKGV 138
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKHQY 192
G+ A + S+ FG VD + +R+ +RI L ++ P++
Sbjct: 139 GKYTAAAVSSICFGGRMPAVDGNFYRVLSRIFADDFDISNSRAFTYFSELAALVMPENVG 198
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + ++ G +CK + P C C ++ C
Sbjct: 199 DFNQAMMDLGSEICKPKNPLCGECPLNEDCLAF 231
>gi|213649172|ref|ZP_03379225.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
Length = 180
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/177 (49%), Positives = 132/177 (74%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
+++AVLLSAQ+TDV+VNKAT L+ A+TP ML +G + +++YI+TIG++ K+EN+I
Sbjct: 1 MLIAVLLSAQATDVSVNKATAKLYPAANTPAAMLELGVEGVKSYIKTIGLFNSKAENVIK 60
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
IL+++ + ++P+ L LPG+GRK ANV+L+ AFG PTI VDTHIFR+ NR A
Sbjct: 61 TCRILMDKHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFA 120
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
PGK +VE+ LL+++P + + + H+WL+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 121 PGKNVEQVEEKLLKVVPNEFKVDCHHWLILHGRYTCIARKPRCGSCLIEDLCEYKEK 177
>gi|39937545|ref|NP_949821.1| A/G-specific adenine glycosylase [Rhodopseudomonas palustris
CGA009]
gi|39651404|emb|CAE29926.1| adenine glycosylase mutY [Rhodopseudomonas palustris CGA009]
Length = 349
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+T V T
Sbjct: 6 AALLAWYDRHRRTLPWRAPPGATADPYAVWLSEIMLQQTTVRAVGPYFDKFMARWPTVTA 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G Y ++ N+ + + + + + P T EGL LPG+G A
Sbjct: 66 LGEASLDDVLKMWAGLGYYS-RARNLHACAVAVTRQHGGRFPDTEEGLRALPGVGPYTAA 124
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AF T+ VD +I R+ +R+ + P ++ ++ P ++ L+
Sbjct: 125 AIAAIAFSRRTMPVDGNIERVVSRLYAVEDELPKAKPRIKALAETLLGPSRAGDSAQALM 184
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C +KP C C + C
Sbjct: 185 DLGATICTPKKPACALCPLMQGC 207
>gi|86356643|ref|YP_468535.1| A/G-specific adenine glycosylase protein [Rhizobium etli CFN 42]
gi|86280745|gb|ABC89808.1| A/G-specific adenine glycosylase protein [Rhizobium etli CFN 42]
Length = 367
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + E
Sbjct: 14 LLDWYDRHHRDLPWRISPGMAARGVKPDPYRVWLSEVMLQQTTVQAVKPYFEKFLERWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P T EGL LPGIG
Sbjct: 74 VTDLAAAESDAVMATWAGLGYYA-RARNLKKCAEAVAKEHGGVFPDTEEGLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++ + + P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIEAPLPAAKPAMKAKVALLTPSGRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C N C+ +K
Sbjct: 193 AMMDLGATICTPKRPACSLCPFRNACQALK 222
>gi|163745414|ref|ZP_02152774.1| A/G-specific adenine glycosylase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382232|gb|EDQ06641.1| A/G-specific adenine glycosylase, putative [Oceanibulbus indolifex
HEL-45]
Length = 354
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 16/219 (7%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNV 66
+ + ++ + + + L + + + + ++ ++ Q+T V
Sbjct: 1 MREKTSVSKLPPILLEWYDTHARALPWRVPPHDRMAGVTPDPYRIWLSEVMLQQTTVATV 60
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ A +K + +G Y ++ N++ + ++ E P
Sbjct: 61 KDYFARFTTRWPDVGALAAAADKDVMAEWAGLGYYA-RARNLLKCARAVVAEHGGNFPAD 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLL 183
+ L +LPGIG A I S+AF +P +D ++ R+ R+ P ++ +
Sbjct: 120 HDALLKLPGIGPYTAAAISSIAFDLPHAVLDGNVERVMARVYNIHTPLPAAKPELMARAV 179
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + ++ G +C + P C C C
Sbjct: 180 ALTPQGRPGDYAQAVMDLGATICTPKSPACGICPWREPC 218
>gi|55821729|ref|YP_140171.1| A/G-specific adenine glycosylase [Streptococcus thermophilus LMG
18311]
gi|55823649|ref|YP_142090.1| A/G-specific adenine glycosylase [Streptococcus thermophilus
CNRZ1066]
gi|55737714|gb|AAV61356.1| A/G-specific adenine glycosylase [Streptococcus thermophilus LMG
18311]
gi|55739634|gb|AAV63275.1| A/G-specific adenine glycosylase [Streptococcus thermophilus
CNRZ1066]
Length = 383
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWDAEKIASFRRTLLDWYDREKRDLPWRRIKNPYYIWVSEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+KL +G Y + N+ + ++ +F + P T + + +L
Sbjct: 70 DWFPTVKDLAEAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGQFPDTYDNIAKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGSDIESAKNPRPDESPIRFFCAAY 224
>gi|116628448|ref|YP_821067.1| A/G-specific adenine glycosylase [Streptococcus thermophilus LMD-9]
gi|116101725|gb|ABJ66871.1| A/G-specific DNA-adenine glycosylase [Streptococcus thermophilus
LMD-9]
gi|312279069|gb|ADQ63726.1| A/G-specific adenine glycosylase [Streptococcus thermophilus ND03]
Length = 383
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWDAEKIASFRRTLLDWYDREKRDLPWRRIKNPYYIWVSEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+KL +G Y + N+ + ++ +F + P T + + +L
Sbjct: 70 DWFPTVKDLAEAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGQFPDTYDNIAKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGSDIESAKNPRPDESPIRFFCAAY 224
>gi|329960936|ref|ZP_08299215.1| A/G-specific adenine glycosylase [Bacteroides fluxus YIT 12057]
gi|328532222|gb|EGF59026.1| A/G-specific adenine glycosylase [Bacteroides fluxus YIT 12057]
Length = 346
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ + +
Sbjct: 6 KRLLEWYAENKRELPWRGTTDPYLIWISEIILQQTRVAQGYEYFLRFVRRFPDVASLAEA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + K P + E + L G+G A I S
Sbjct: 66 PEDEVMKYWQGLGYYSRARNLHAAAKS-----MKGKFPVSYEEVRALKGVGDYTAAAICS 120
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R + + + K + + ++
Sbjct: 121 FAYNMPYAAVDGNVYRVLSRYFGIDVPIDSTEGKKVFAALAQEALDKKRPADYNQAIMDF 180
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C ++ C + +
Sbjct: 181 GAIQCTPQSPDCLFCPLAESCSALSK 206
>gi|94984128|ref|YP_603492.1| A/G-specific adenine glycosylase [Deinococcus geothermalis DSM
11300]
gi|94554409|gb|ABF44323.1| A/G-specific adenine glycosylase [Deinococcus geothermalis DSM
11300]
Length = 343
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 11/202 (5%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ L + + + + V+ +L Q+ + E T + +
Sbjct: 13 LLAWFDRAGRALPWRVGPEGRRDPYRVWVSEVLLQQTQVARGRVYFERFLEAFPTVEALA 72
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + G Y + + + +P T +G LPG+G A +
Sbjct: 73 DAPIEAVLKAWEGCGYYARARNLHRAAGVMAREG----VPTTYDGWRALPGVGPYTAAAV 128
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
S+A G D ++ R+ R+ T + ++ P + L+ G
Sbjct: 129 ASLACGEARAVNDGNVRRVLARLHGERQPTAAWAQARADELLDPARPGACNEALMDLGAT 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC + PQC C + C +
Sbjct: 189 VCTPKAPQCGECPLRRWCAAFQ 210
>gi|281351926|gb|EFB27510.1| hypothetical protein PANDA_008126 [Ailuropoda melanoleuca]
Length = 502
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSA 59
SP E+ + K +L + + + V+ ++
Sbjct: 28 ASVSPYHLFRGTAEVRAFRENLLRWYDREKRDLPWRRRAEGEVDLDRRAYAVWVSEVMLQ 87
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + + + +G Y + ++
Sbjct: 88 QTQVATVIDYYTRWMQKWPTLQDLASASLEGVNQLWAGLGYYSRGRRLHEGARKVVEELG 147
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
+ LPG+GR A I S+AFG T VD ++ R+ R+ + + +
Sbjct: 148 GHVPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVVRVLCRVRAIGADSSSALV 207
Query: 180 QSL-----LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC + P+C C + +LC+ ++
Sbjct: 208 SQHLWSLAQQLVDPARPGDLNQAAMELGATVCTPQHPRCSQCPVRSLCRAHQR 260
>gi|49475251|ref|YP_033292.1| A/G-specific adenine glycosylase [Bartonella henselae str.
Houston-1]
gi|49238056|emb|CAF27263.1| A/G-specific adenine glycosylase [Bartonella henselae str.
Houston-1]
Length = 368
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 89/224 (39%), Gaps = 16/224 (7%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVN 65
L+ K + EI + L + + + + ++ ++ Q+T
Sbjct: 10 SLWLTKIMHEISLRLLSWYDQKHRHLPWRITPKEQMQGIRPDPYRVWLSEIMLQQTTVEA 69
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V K ++ + + + +G Y ++ N+ + + L+ ++ + PQ
Sbjct: 70 VKPYFKKFLQLWPDLSSLAKASQDDIMKAWAGLGYYS-RARNLKNCAQQLVEDYGGQFPQ 128
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSL 182
+++ L L GIG A I ++AF P VD+++ R+ R+ P ++++
Sbjct: 129 SIKVLRSLSGIGDYTAAAIAAIAFNHPVAVVDSNVERVVTRLFAITSVLPKAKAEIKEKT 188
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+I + ++ G +C RKP C C + LC+ K
Sbjct: 189 QKITALNRPGDFAQAMMDLGATICIPRKPSCSLCPLQGLCRAEK 232
>gi|218682343|ref|ZP_03529944.1| A/G-specific adenine glycosylase [Rhizobium etli CIAT 894]
Length = 224
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 14 LLDWYDRHHRDLPWRVSPGMAAGGVKPDPYHVWLSEVMLQQTTVQAVKPYFSRFLQRWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P T EGL LPGIG
Sbjct: 74 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVAKEHGGVFPDTEEGLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++Q + R+ P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIDTPLPAAKPTMKQKVARLTPADRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ ++
Sbjct: 193 AMMDLGATICTPKRPTCSLCPFRGACEALR 222
>gi|323139601|ref|ZP_08074645.1| A/G-specific adenine glycosylase [Methylocystis sp. ATCC 49242]
gi|322395151|gb|EFX97708.1| A/G-specific adenine glycosylase [Methylocystis sp. ATCC 49242]
Length = 355
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + EL + + + + ++ ++ Q+T V + +
Sbjct: 13 AALLAWYDAHRRELPWRARPGEAVDPYAVWLSEIMLQQTTVATVKGYFLKFLARWPSVEA 72
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G Y ++ N+ + + ++ EF + P + E L LPGIG A
Sbjct: 73 LAETPLEETLAEWAGLGYYA-RARNLHACAGVVAREFGGRFPASEEALLGLPGIGPYTAA 131
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AF P + VD ++ R+ R+ + ++ ++PP + L+
Sbjct: 132 AIAAIAFNQPCVAVDGNVERVIARLHAIDTPPRRAKPLIRETTQAMLPPSRAGDFAQALM 191
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VC R P C +C +++ C
Sbjct: 192 DLGATVCAPRAPDCPACPLADFC 214
>gi|242398202|ref|YP_002993626.1| Endonuclease III [Thermococcus sibiricus MM 739]
gi|242264595|gb|ACS89277.1| Endonuclease III [Thermococcus sibiricus MM 739]
Length = 233
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +EI + K L + + ++ ++S + D NK K LF+
Sbjct: 18 KKRRAKEIVKRLINHYQREK--LLTGDPYKTLIYCIISQRMRDEVTNKVGKMLFKKYKNI 75
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSE--NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + +++Q ++R G+ K++ I+ S I++ E+ ++P +E L +LPGIGR
Sbjct: 76 ENIANAPVEEMQEFLRNNGVGLWKTKGEWIVRTSQIILREYRGRVPNKIEELMKLPGIGR 135
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L+ FG TI VDTH+ RIS R+GLAP P KVE+ L ++IP ++
Sbjct: 136 KCANIVLAYGFGKQTIPVDTHVNRISKRLGLAPPTVAPEKVEEYLKKLIPEDLWIYINHA 195
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
+V HG+ +CK P+C C +LC
Sbjct: 196 MVDHGKRICKPIGPKCHECFFQDLCPY 222
>gi|332559932|ref|ZP_08414254.1| A/G-specific adenine glycosylase [Rhodobacter sphaeroides WS8N]
gi|332277644|gb|EGJ22959.1| A/G-specific adenine glycosylase [Rhodobacter sphaeroides WS8N]
Length = 367
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 16/215 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATK 71
+ +I + + + + + + + ++ ++ Q+T V +
Sbjct: 9 DAGDISARLLVWYDRHARVMPWRVGPAERRAGLRPDPYRVWLSEIMLQQTTVAAVRDYFR 68
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + + A + + +G Y ++ N++ + ++ + P T +GL
Sbjct: 69 RFTERWPDVEALAAAPDADVMAEWAGLGYYA-RARNLLKGARAVVALHGGRFPGTRDGLL 127
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPP 188
LPG+G A + S+AF P VD ++ R+ +R+ P ++ + + P
Sbjct: 128 SLPGVGPYTAAAVASIAFDEPATVVDGNVERVVSRLFAVETPLPAAKPELTRLAATLTPQ 187
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ + ++ G +C RKP C C + C+
Sbjct: 188 ERPGDHAQAMMDLGATICTPRKPVCSLCPLRPDCE 222
>gi|291280240|ref|YP_003497075.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754942|dbj|BAI81319.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 220
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/214 (32%), Positives = 122/214 (57%), Gaps = 7/214 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKG-------ELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ +++EI+ L + + K E + F ++V+ L+S ++ D + +K
Sbjct: 1 MKNRNDIKEIYDLLLKAYENLKSPSVTKIAEKNGRDPFKVLVSCLISLRTKDEVTLEVSK 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LFE+ADTP K+L + +++L+ + G YRKK + + +S LI +++ ++P +LE L
Sbjct: 61 KLFEVADTPNKLLKMEDEELEKILYPAGFYRKKVKVLKEVSKTLIEKYEGRVPDSLEELL 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
++ G+GRK AN++L F I VDTH+ RI NR+G+ KTP + E L +I+P
Sbjct: 121 KIKGVGRKTANLVLVEGFDKEGICVDTHVHRICNRLGVVKTKTPEQTEMDLRKILPKHMW 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV +G+++CK P C +CI+ + C +I
Sbjct: 181 KKWNEILVSYGQHICKPISPLCSACILYDKCDKI 214
>gi|190890708|ref|YP_001977250.1| A/G-specific adenine glycosylase [Rhizobium etli CIAT 652]
gi|190695987|gb|ACE90072.1| A/G-specific adenine glycosylase protein [Rhizobium etli CIAT 652]
Length = 367
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + E
Sbjct: 14 LLDWYDRHHRDLPWRVSPGMAARGVKPDPYRVWLSEVMLQQTTVQAVKPYFERFLERWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P + GL LPGIG
Sbjct: 74 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVAQEHGGVFPDSEAGLKALPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P ++ + + P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIETPLPAAKPVMKNKVALLTPAGRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C+ +K
Sbjct: 193 AMMDLGATICTPKRPACSLCPFRGACQALK 222
>gi|229165459|ref|ZP_04293243.1| hypothetical protein bcere0007_4470 [Bacillus cereus AH621]
gi|228618057|gb|EEK75098.1| hypothetical protein bcere0007_4470 [Bacillus cereus AH621]
Length = 365
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+G
Sbjct: 71 ALATADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGTVPSDVKKIKKLKGVGPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVMRVLSRILSVWDDIAKPKTRKVFEEIVREIISIENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPSCLLCPVREHCRGYAE 220
>gi|154505129|ref|ZP_02041867.1| hypothetical protein RUMGNA_02642 [Ruminococcus gnavus ATCC 29149]
gi|153794608|gb|EDN77028.1| hypothetical protein RUMGNA_02642 [Ruminococcus gnavus ATCC 29149]
Length = 579
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ K +L + + + V+ ++ Q+ V + T + E +
Sbjct: 242 AWYRENKRDLPWRHDVTPYRVWVSEIMLQQTRVEAVKPYYDRFLKELPTITDLANAKEDR 301
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L +G Y + N+ + ++ ++ + P++ E + L GIG A I S AFG
Sbjct: 302 LMKLWEGLGYYN-RVRNMQKAAIQMVEQYGGQFPESYEEIHALTGIGNYTAGAIGSFAFG 360
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
IP VD ++ R+ +RI + +E +L +IP + + L+ G V
Sbjct: 361 IPKPAVDGNVLRVVSRILASREDIMKAKVRTAIETALEEVIPKDCPGDFNQGLIELGAIV 420
Query: 206 CKARK-PQCQSCIISNLCKRIKQ 227
C P+C+ C + +C+ K+
Sbjct: 421 CVPNGEPKCEICPAAEICRARKE 443
>gi|307105137|gb|EFN53388.1| hypothetical protein CHLNCDRAFT_12569 [Chlorella variabilis]
Length = 196
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 104/196 (53%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + I L +P+P L + + F L+ AVLLSAQ+TD VN+ T LF++A M
Sbjct: 1 KAQRIAELLGRLYPNPPIPLDHASTFQLLCAVLLSAQTTDKKVNECTPALFQLAPDAAGM 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A +Q IR++G+ K++N+ ++S +L+ E ++P ++ L LPG+G K A+V
Sbjct: 61 AAADVADIQACIRSLGLAPTKAKNLKAMSQMLLAEHGGEVPASMAALEALPGVGHKTASV 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
++ AF VDTHI R++ R GL GK+ + E L + P H ++ GR
Sbjct: 121 VMCQAFAQDAFPVDTHIHRLAQRWGLTDGKSVEQTEADLKLLFPQSLWKELHLQIIFFGR 180
Query: 204 YVCKARKPQCQSCIIS 219
C A++ C +
Sbjct: 181 EKCPAQRHDPILCPVC 196
>gi|304310367|ref|YP_003809965.1| MutY DNA glycosylase [gamma proteobacterium HdN1]
gi|301796100|emb|CBL44305.1| MutY DNA glycosylase [gamma proteobacterium HdN1]
Length = 382
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
L+ L + + EL + + + V+ ++ Q+ V + +
Sbjct: 32 LQRFDQLLLEWYDHHGRKELPWQVERSPYRTWVSEIMCQQTRVGTVIPYFERFMAHFPSL 91
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ +G Y ++ N+ + I+ + + P+T++ L +LPGIGR
Sbjct: 92 SALAQAPIDEVLGLWTGLGYYA-RARNLHKTAQIVQDCQHGEFPKTIDSLMQLPGIGRST 150
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRI----IPPKHQYNAH 195
A IL+ + I +D ++ R+ R+ G E+ L + P + +
Sbjct: 151 AGAILASSLSIRAPILDGNVKRVLARVHRVAGWPSSPATEKVLWALAEQYTPYQRIPDYT 210
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G VC KP C +C ++ LC+ +
Sbjct: 211 QAIMDLGAMVCTPSKPDCAACPLTTLCEAFQ 241
>gi|120437895|ref|YP_863581.1| A/G-specific adenine glycosylase [Gramella forsetii KT0803]
gi|117580045|emb|CAL68514.1| A/G-specific adenine glycosylase [Gramella forsetii KT0803]
Length = 350
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K +L + + + ++ ++ Q+ + + +
Sbjct: 5 NRLTHWYLQNKRDLPWRKTHEPYHIWLSEIMLQQTRIEQGLPYYNKFIQAYPSVFDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ + +G Y ++ N+ + + E + K P T +GL +L G+G A+ I S
Sbjct: 65 TPEEVLKLWQGLGYYS-RARNLHETAKYVAFELNGKFPGTYKGLLKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ + P VD +++R+ +RI + + ++ + ++
Sbjct: 124 ICYNEPVAVVDGNVYRVLSRIFGIDTPINSAAGIKEFKLLAQELLDKNDPATFNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G CK +KP+C+ C ++ C +K
Sbjct: 184 GALHCKPQKPKCEICPFNDSCLALK 208
>gi|257075651|ref|ZP_05570012.1| endonuclease III [Ferroplasma acidarmanus fer1]
Length = 217
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+ + I+ P E + F +++ +LS ++ D+ ++A + L+
Sbjct: 2 KDFKNIYMKIREVSPEHHFEFT-DSPFWILITTILSHRTKDIVTDQAARSLYNKYHDSVG 60
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ I+ +G KS II ++ I+ +E+ K+P T + L +LPG G K AN
Sbjct: 61 LENADPADVKAIIKYVGFSNVKSLRIIEIARIINHEYGGKVPDTHDELVKLPGTGSKTAN 120
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
++L+ F IP I VDTH+FR+SNRIGL K P++ E++L I+P ++Q + +V G
Sbjct: 121 IVLTQGFNIPAIAVDTHVFRVSNRIGLVHTKNPDETEEALKSIVPLEYQVEFNPVMVEFG 180
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+ +CK P+C C +S+ C Q
Sbjct: 181 KNICKPVSPRCNICPVSDCCDYFAQ 205
>gi|86824010|gb|AAI05491.1| MutY homolog (E. coli) [Bos taurus]
Length = 297
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 16/240 (6%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLI 52
+K+ SP E+ + + K +L + + +
Sbjct: 46 QQKALLQASVSPYHLFRDVAEVTALQESLLDWYDRKKRDLPWRRLVEDEVDLDRRAYAVW 105
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
VA ++ Q+ V + T Q + + +++ +G Y +
Sbjct: 106 VAEVMLQQTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRWLQEGAR 165
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--- 169
++ + LPG+GR A I S+AFG VD ++ R+ R+
Sbjct: 166 KVVEELGGHMPRTAETLQQFLPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLCRVRAIGA 225
Query: 170 --APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +++ P + + + G VC ++P C C + NLC+ ++
Sbjct: 226 DSSSTLVSQHLWSLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCRARQR 285
>gi|23098351|ref|NP_691817.1| A/G-specific adenine glycosylase [Oceanobacillus iheyensis HTE831]
gi|22776577|dbj|BAC12852.1| A/G-specific adenine glycosylase [Oceanobacillus iheyensis HTE831]
Length = 354
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + V+ ++ Q+ V E T + E
Sbjct: 17 LLEWYYLNKRDLPWRREPNPYKTWVSEIMLQQTKVDTVIPYFNRFMEKYPTVYDLAKADE 76
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + +++ ++ +IP + L L GIG ILS+A
Sbjct: 77 QDVLKSWEGLGYYS-RARNLQTAVREVVDTYNGEIPNNEKELASLKGIGPYTKGAILSIA 135
Query: 149 FGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F P VD ++ R+ +RI +A T ++EQ + II + + + ++ G
Sbjct: 136 FNQPVPAVDGNVLRVFSRILQIEDDIAKQSTKKEIEQYVGEIISHQDPSSFNQAIMDLGA 195
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C +KP C C + C+ +
Sbjct: 196 TICTPKKPTCMFCPVMEHCQAFQ 218
>gi|313903363|ref|ZP_07836755.1| A/G-specific adenine glycosylase [Thermaerobacter subterraneus DSM
13965]
gi|313466451|gb|EFR61973.1| A/G-specific adenine glycosylase [Thermaerobacter subterraneus DSM
13965]
Length = 448
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI + + +L + + + ++V+ ++ Q+ + + +
Sbjct: 13 EIRSRLIHWYDAHCRDLPWRRTRDPYAVLVSEIMLQQTRVDTALPYYLRFLQRFPSACHL 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A E+++ + +G YR ++ + + +L+ + ++P E + LPG+G A
Sbjct: 73 AAAPEEEVLRLWQGLGYYR-RARQLHQAARVLVERYGGRVPPDFEAVRSLPGVGDYTAGA 131
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAHYWL 198
+ S+AF +P VD + R+ R+ + L R++ + +
Sbjct: 132 VCSIAFDLPVPAVDGNAQRVLARLFGVDEPADRAAGRRRLDELARRLVQGPRPGALNQAV 191
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC R+P+C C ++ LC +
Sbjct: 192 MELGSTVCTPRRPRCDRCPLAGLCVAGR 219
>gi|156742725|ref|YP_001432854.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
gi|156234053|gb|ABU58836.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
Length = 219
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGEL-------YYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
T ++ + + P L N F +++A +LS ++ D
Sbjct: 1 MTTFDIHAAMAILRAEMPRFPKPLIDGMGEEEANNPFRILIATILSLRTKDTMTAVVAPR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF +AD+P+KMLA+ E+++ I +G YR K+ I ++ LI E K+P L+ L
Sbjct: 61 LFAVADSPEKMLALSEEEIAELIYPVGFYRNKARTIRAICRRLIEEHGGKVPADLDALLA 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
LPG+GRK AN++L+ F +P I VDTH+ RI NR G +TP + E L I+P ++
Sbjct: 121 LPGVGRKTANLVLTAGFDLPGICVDTHVHRICNRWGYVQTRTPEETEMKLREILPFEYWK 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+ +C P+C +C +++LC R+
Sbjct: 181 EINGLLVTLGQNICHPTSPRCSACPLAHLCARV 213
>gi|86143785|ref|ZP_01062161.1| putative A/G-specific adenine glycosylase [Leeuwenhoekiella
blandensis MED217]
gi|85829828|gb|EAQ48290.1| putative A/G-specific adenine glycosylase [Leeuwenhoekiella
blandensis MED217]
Length = 361
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ E + +
Sbjct: 6 KKLIHWYLQNKRELPWRQTKDPYRIWLSEIILQQTRVEQGMPYYFSFVETYPDVKALADA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + + +G Y ++ N+ + + + E P T + L +L G+G A+ I S
Sbjct: 66 PEDDVLKLWQGLGYYS-RARNLHATAKKVAYEHKGIFPDTYKELKKLKGVGDYTASAIAS 124
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ F VD +++R+ +RI + + + +I K + ++
Sbjct: 125 ICFDEAAAVVDGNVYRVLSRIFGIDTPINSTPGAKEFKALAQELIDEKDPATFNQAIMEF 184
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C C + C +Q
Sbjct: 185 GATQCKPKNPYCLHCPFNEGCIAFQQ 210
>gi|83594581|ref|YP_428333.1| A/G-specific DNA-adenine glycosylase [Rhodospirillum rubrum ATCC
11170]
gi|83577495|gb|ABC24046.1| A/G-specific DNA-adenine glycosylase [Rhodospirillum rubrum ATCC
11170]
Length = 359
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 74/203 (36%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L + + + + ++ ++ Q+T V + T
Sbjct: 17 ERLLDWYRRNARTLPWRAPFGERTDPYRVWLSEVMLQQTTVPAVIPYFQAFLARWPTVTD 76
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++ +G Y ++ N+ + + D P T + L LPGIG A
Sbjct: 77 LAAAPLDEVLTAWAGLGYYA-RARNLHKCAQTIATWRDGTFPATEDELHTLPGIGTYTAA 135
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG P + +D +I R+ R+ P + ++ P H L+
Sbjct: 136 AIAAIAFGQPAVVMDGNIERVMARLFAETEPLPQGKKALYARAAQLTPTAHPGEHAQALM 195
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C RKP C C + C
Sbjct: 196 DLGATLCTPRKPACGLCPWRDPC 218
>gi|77462005|ref|YP_351509.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides
2.4.1]
gi|77386423|gb|ABA77608.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides
2.4.1]
Length = 367
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 83/215 (38%), Gaps = 16/215 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATK 71
+ +I + + + + + + ++ ++ Q+T V +
Sbjct: 9 DAGDISARLLAWYDRHARVMPWRVGPAERRAGHRPDPYRVWLSEIMLQQTTVAAVRDYFR 68
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ + + A + + +G Y ++ N++ + ++ + P+T +GL
Sbjct: 69 RFTDRWPDVEALAAAPDADVMAEWAGLGYYA-RARNLLKGARAVVALHGGRFPETRDGLL 127
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPP 188
LPG+G A + S+AF P VD ++ R+ +R+ P ++ + + P
Sbjct: 128 SLPGVGPYTAAAVASIAFDEPATVVDGNVERVVSRLFAVETPLPAAKPELTRLAATLTPQ 187
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G +C RKP C C + C+
Sbjct: 188 VRPGDHAQAMMDLGATICTPRKPVCSLCPLRPDCE 222
>gi|209548258|ref|YP_002280175.1| A/G-specific adenine glycosylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534014|gb|ACI53949.1| A/G-specific adenine glycosylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 365
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 14 LLDWYDRHHRDLPWRISPGMAAGGVKPDPYRVWLSEVMLQQTTVQAVKPYFAKFLQRWPE 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P T EGL LPGIG
Sbjct: 74 VTDLAAAENDAVMAAWAGLGYYA-RARNLKKCAEAVAKEHGGVFPDTEEGLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P +++ + R+ P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIETPLPAGKPLMKEKVARLTPATRPGDFAQ 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C C +K
Sbjct: 193 AMMDLGATICTPKRPACSLCPFRGACAALK 222
>gi|73977978|ref|XP_539632.2| PREDICTED: similar to A/G-specific adenine DNA glycosylase (MutY
homolog) (hMYH) [Canis familiaris]
Length = 573
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
E+ + K +L + + + V+ ++ Q+ V
Sbjct: 114 AEVMAFRENLLNWYDREKRDLPWRRLAEGEVDLDRRAYAVWVSEVMLQQTQVATVIDYYT 173
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q + +++ +G Y + ++ +
Sbjct: 174 RWMQKWPTLQDLAGASLEEVNQLWAGLGYYSRGRRLQQGARKVVEELGGHVPHTAETLQR 233
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRII 186
LPG+GR A I S+AFG T VD ++ R+ R+ + + + +++
Sbjct: 234 LLPGVGRYTAGAIASIAFGQATGVVDGNVIRVLCRVRAIGADSSSTLVSQHLWGLAQQLV 293
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC + P C C + +LC+ ++
Sbjct: 294 DPARPGDFNQAAMELGALVCTPQHPHCSQCPVRSLCRAYQK 334
>gi|227330621|ref|NP_573513.2| A/G-specific adenine DNA glycosylase [Mus musculus]
gi|227330623|ref|NP_001153053.1| A/G-specific adenine DNA glycosylase [Mus musculus]
gi|37360943|dbj|BAC98380.1| mutY homolog alpha [Mus musculus]
gi|122889969|emb|CAM13543.1| mutY homolog (E. coli) [Mus musculus]
Length = 515
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 182 LLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLV 241
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 282
>gi|65317939|ref|ZP_00390898.1| COG1194: A/G-specific DNA glycosylase [Bacillus anthracis str.
A2012]
Length = 365
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ + + +L + + + + V+ ++ Q+ V + T +
Sbjct: 11 IEQFQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLE 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++++ +G Y ++ N+ + + + +P ++ + +L G+
Sbjct: 71 ALANADDEEVLKAWEGLGYYS-RARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVXPYTK 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+GIP VD ++ R+ + +A KT E+ + II ++ +
Sbjct: 130 GAILSIAYGIPEPAVDGNVVRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C + P C C + C+ +
Sbjct: 190 GLMELGALICIPKNPACLLCPVREHCRGYAE 220
>gi|301768150|ref|XP_002919493.1| PREDICTED: A/G-specific adenine DNA glycosylase-like isoform 2
[Ailuropoda melanoleuca]
Length = 533
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSA 59
SP E+ + K +L + + + V+ ++
Sbjct: 62 ASVSPYHLFRGTAEVRAFRENLLRWYDREKRDLPWRRRAEGEVDLDRRAYAVWVSEVMLQ 121
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + + + +G Y + ++
Sbjct: 122 QTQVATVIDYYTRWMQKWPTLQDLASASLEGVNQLWAGLGYYSRGRRLHEGARKVVEELG 181
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
+ LPG+GR A I S+AFG T VD ++ R+ R+ + + +
Sbjct: 182 GHVPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVVRVLCRVRAIGADSSSALV 241
Query: 180 QSL-----LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC + P+C C + +LC+ ++
Sbjct: 242 SQHLWSLAQQLVDPARPGDLNQAAMELGATVCTPQHPRCSQCPVRSLCRAHQR 294
>gi|254826063|ref|ZP_05231064.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
J1-194]
gi|254853605|ref|ZP_05242953.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
R2-503]
gi|254932865|ref|ZP_05266224.1| A/G-specific adenine glycosylase [Listeria monocytogenes HPB2262]
gi|300764752|ref|ZP_07074743.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
N1-017]
gi|258606979|gb|EEW19587.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
R2-503]
gi|293584420|gb|EFF96452.1| A/G-specific adenine glycosylase [Listeria monocytogenes HPB2262]
gi|293595304|gb|EFG03065.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
J1-194]
gi|300514638|gb|EFK41694.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
N1-017]
gi|328473936|gb|EGF44752.1| A/G-specific adenine glycosylase [Listeria monocytogenes 220]
Length = 362
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 66 FPTMEDFVQADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ + T E+ L ++I ++
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKVSTRKIFEEVLYQLIDKENP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 219
>gi|78183727|ref|YP_376161.1| Mutator MutT [Synechococcus sp. CC9902]
gi|78168021|gb|ABB25118.1| A/G-specific DNA-adenine glycosylase [Synechococcus sp. CC9902]
Length = 352
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 10/198 (5%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
F WP P L + + + VA ++ Q+ V + E T + ++
Sbjct: 3 KFDGTWPLPDDSL---SPYGIWVAEVMLQQTQLSVVLPFWQRWMETFPTVNALATSSLEE 59
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
++ + +G Y + + + P+ L+G LPG+GR A ILS AF
Sbjct: 60 VRLQWQGLGYYSRARRLHEAA----QLLVELPWPRDLDGWMALPGVGRTTAGGILSSAFN 115
Query: 151 IPTIGVDTHIFRISNRIGLA---PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
PT +D ++ R+ R+ P + + ++ + + L+ G VC
Sbjct: 116 APTPILDGNVKRVLARLHAHGRPPSRDQPRFWHWSEVLLDQSRPRDFNQALMDLGATVCT 175
Query: 208 ARKPQCQSCIISNLCKRI 225
R+P C C + C
Sbjct: 176 PRRPGCHQCPWRDSCAAY 193
>gi|224371723|ref|YP_002605887.1| MutY [Desulfobacterium autotrophicum HRM2]
gi|223694440|gb|ACN17723.1| MutY [Desulfobacterium autotrophicum HRM2]
Length = 364
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 9/208 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI + + EL + N +++ V+ ++ Q+ V E T +
Sbjct: 3 EIQTALLKWYHTHHRELPWRKTANPYSIWVSEVMLQQTQVKTVVPYYGRFMEAFPTVASL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+++ +G Y ++ N + + IP+ L+G LPG+G A
Sbjct: 63 ARADLEQVLKLWEGLGYYA-RARNFHKACQTVTTDLKGIIPRDLKGFKALPGVGDYIAAA 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
+LS+AF IP VD ++ R+ R+ G + K + I+ + +
Sbjct: 122 VLSIAFNIPLAVVDGNVKRVLARVFTMDDPVNHGPSHKKFQAKADLILDRSCPGAFNQAV 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC R P C C + C+ ++
Sbjct: 182 MELGALVCSPRNPGCTICPLGQYCRALE 209
>gi|48428263|sp|Q99P21|MUTYH_MOUSE RecName: Full=A/G-specific adenine DNA glycosylase; AltName:
Full=MutY homolog; Short=mMYH
gi|12656850|gb|AAG16632.1| adenine-DNA glycosylase [Mus musculus]
Length = 515
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 182 LLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLV 241
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 282
>gi|301768148|ref|XP_002919492.1| PREDICTED: A/G-specific adenine DNA glycosylase-like isoform 1
[Ailuropoda melanoleuca]
Length = 522
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSA 59
SP E+ + K +L + + + V+ ++
Sbjct: 51 ASVSPYHLFRGTAEVRAFRENLLRWYDREKRDLPWRRRAEGEVDLDRRAYAVWVSEVMLQ 110
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + + + +G Y + ++
Sbjct: 111 QTQVATVIDYYTRWMQKWPTLQDLASASLEGVNQLWAGLGYYSRGRRLHEGARKVVEELG 170
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
+ LPG+GR A I S+AFG T VD ++ R+ R+ + + +
Sbjct: 171 GHVPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVVRVLCRVRAIGADSSSALV 230
Query: 180 QSL-----LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC + P+C C + +LC+ ++
Sbjct: 231 SQHLWSLAQQLVDPARPGDLNQAAMELGATVCTPQHPRCSQCPVRSLCRAHQR 283
>gi|296207802|ref|XP_002750799.1| PREDICTED: A/G-specific adenine DNA glycosylase isoform 2
[Callithrix jacchus]
Length = 537
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSA 59
SP E+ + K +L + + + V+ ++
Sbjct: 66 ASVSPYHLFRDIAEVTAFRGSLLSWYDQKKRDLPWRRQAEDEVDLDRRAYAVWVSEVMLQ 125
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 126 QTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEKLG 185
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ +K+
Sbjct: 186 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATSVVDGNVARVLCRVRAIGADPSSKLV 245
Query: 179 ----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 246 SQQLWSLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 298
>gi|37046729|gb|AAH57942.1| MutY homolog (E. coli) [Mus musculus]
gi|74142553|dbj|BAE33857.1| unnamed protein product [Mus musculus]
Length = 515
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 182 LLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLV 241
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 282
>gi|47093784|ref|ZP_00231532.1| A/G-specific adenine glycosylase [Listeria monocytogenes str. 4b
H7858]
gi|47017838|gb|EAL08623.1| A/G-specific adenine glycosylase [Listeria monocytogenes str. 4b
H7858]
gi|328466449|gb|EGF37592.1| A/G-specific adenine glycosylase [Listeria monocytogenes 1816]
Length = 362
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F K+P L + L G+
Sbjct: 66 FPTMEDFVQADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGKVPTDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ + T E+ L ++I ++
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKVSTRKIFEEVLYQLIDKENP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 219
>gi|296123583|ref|YP_003631361.1| A/G-specific adenine glycosylase [Planctomyces limnophilus DSM
3776]
gi|296015923|gb|ADG69162.1| A/G-specific adenine glycosylase [Planctomyces limnophilus DSM
3776]
Length = 381
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + L + + +++ ++ ++ Q+T V + + Q +
Sbjct: 5 KFQKQLLAWYAKHGRPLPWRASHDPYSIWISEIMLQQTTVTAVIPYFERFMAKFPSVQAL 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ E+++ +G Y ++ N+ + +L+ + PQ++E L LPGIGR A
Sbjct: 65 ASAPEEEVLKLWEGLGYYS-RARNLHQSARVLMERYQGVFPQSVEQLLELPGIGRYTAGA 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
I S AF +P V+ + R+ RI L + I+ K + L
Sbjct: 124 ISSFAFRLPAPIVEANTQRLYARILGYDGDLKNAAGQKALWGFAESIVSGKEPDLINQAL 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VCK P C C + C+ ++
Sbjct: 184 MELGSLVCKPIDPLCDQCPVQQHCRAFQE 212
>gi|325261532|ref|ZP_08128270.1| A/G-specific adenine glycosylase [Clostridium sp. D5]
gi|324032986|gb|EGB94263.1| A/G-specific adenine glycosylase [Clostridium sp. D5]
Length = 582
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 10/204 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + + + + ++ ++ Q+ V + + T + + + E
Sbjct: 238 LVSWYQEHKRDLPWRHEISAYRVWISEIMLQQTRVEAVKPYFERFLKELPTVKDLAEVEE 297
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+L +G Y + N+ + ++ + + P T + + L GIG A + S A
Sbjct: 298 DRLLKLWEGLGYYN-RVRNMQKAARQIMEQHHGEFPDTYDEILSLTGIGSYTAGAVSSFA 356
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGR 203
FGIP VD ++ R++ R+ +EQ + +IP + + L+ G
Sbjct: 357 FGIPKPAVDGNVLRVAARLMARDEDIMKAGVRTRIEQEIEEVIPADAPSDFNQGLIELGA 416
Query: 204 YVCKAR-KPQCQSCIISNLCKRIK 226
VC P+C C ++ LC K
Sbjct: 417 IVCVPNGGPKCTECPLAGLCMAKK 440
>gi|254487387|ref|ZP_05100592.1| A/G-specific adenine glycosylase [Roseobacter sp. GAI101]
gi|214044256|gb|EEB84894.1| A/G-specific adenine glycosylase [Roseobacter sp. GAI101]
Length = 354
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 78/219 (35%), Gaps = 16/219 (7%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNV 66
+ + + + + + + + + + ++ ++ Q+T V
Sbjct: 1 MRDTDDTSTLPRILLEWYDVHARAMPWRVGPTDRKAGLRPDPYRIWLSEVMLQQTTVATV 60
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T + A + + +G Y ++ N++ + ++++ + P
Sbjct: 61 RDYFQRFTARWPTVADLAAAQDADVMGEWAGLGYYA-RARNLLKCARAVVDQHGGEFPAD 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLL 183
L +LPGIG A + S+AF +P +D ++ R+ R+ P ++
Sbjct: 120 HAALLKLPGIGPYTAAAVSSIAFDLPHAVLDGNVERVMARLYEIHTPLPAAKPEMMARAE 179
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + ++ G +C + P C C C
Sbjct: 180 ALTPRVRPGDYAQAVMDLGATICTPKSPACGICPWRAPC 218
>gi|318042871|ref|ZP_07974827.1| A/G-specific adenine glycosylase [Synechococcus sp. CB0101]
Length = 373
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 4/185 (2%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
++ + + VA ++ Q+ V + E + + A E + + +G
Sbjct: 32 CPDEQLDPYAIWVAEVMLQQTQLQVVLPYWQRWMEAFPSLAALAAAEEHDVLLLWQGLGY 91
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
Y ++ +++ + + + PQ LE LPGIGR A ILS AF P +D ++
Sbjct: 92 YS-RARRLLAGARQMQALSPSAWPQDLESWLALPGIGRSTAGSILSSAFNRPFAILDGNV 150
Query: 161 FRISNRIGLAPGKTPNKVEQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
R+ R+ +++ ++ P + + L+ G VC R P+C+ C
Sbjct: 151 KRVLARLIACERPPARELKHFWALSEALLDPARPRDFNQALMDLGATVCTPRNPRCEQCP 210
Query: 218 ISNLC 222
C
Sbjct: 211 WQFQC 215
>gi|291460248|ref|ZP_06599638.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417195|gb|EFE90914.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
Length = 232
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Query: 28 IFYLFSLKWPS-PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
I + P L + L+ A +LSAQ TD VNK T L+ + Q
Sbjct: 18 IMKRLEEHYREVPMSFLEASTPWQLLFATILSAQCTDARVNKVTDLLYRKYRSVQDFADC 77
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++L+ I +IG Y K+ N+ + + +L+ ++ ++P LE LT LPG+GRK AN+IL
Sbjct: 78 DLRELERDIHSIGFYHSKARNLKACAAVLLEKYGGRVPDQLEELTALPGVGRKTANLILG 137
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
+G I VDTH+ R+SNR+GLA P K E L IP + + ++ GR C
Sbjct: 138 RVYGKAAIVVDTHVRRVSNRLGLAKSSDPLKTELQLQDSIPREFWTRWNTRVMALGRTRC 197
Query: 207 KARKPQCQSCIISNLCKR 224
+ KP+C+SC + +LC
Sbjct: 198 SSLKPKCESCYLKDLCPS 215
>gi|218290416|ref|ZP_03494546.1| A/G-specific adenine glycosylase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239544|gb|EED06738.1| A/G-specific adenine glycosylase [Alicyclobacillus acidocaldarius
LAA1]
Length = 382
Score = 113 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 9/214 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L + + +L + + + ++V+ + Q+ V E
Sbjct: 2 EESLAAFAHTLEAWYTQTSRDLPWRRTADPYAILVSETMLQQTRVETVIPYYNRFMERFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + + +G YR ++ N+ + ++ + +IP + L LPGIG
Sbjct: 62 TPLHLADADMDDVLKMWEGLGYYR-RARNLKAAMEVVRDRHGGRIPDHPDELRALPGIGP 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYN 193
+LS+AF P VD ++ R+ R ++EQ + ++
Sbjct: 121 YTLGAVLSIAFNRPFPAVDGNVLRVMARYCAIEEPVDLPKVKRQIEQDVAEVLKHGTPRF 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC +KP+C +C +++ C +
Sbjct: 181 LTQAIMELGALVCVPKKPRCSACPVASSCAAGAR 214
>gi|266623597|ref|ZP_06116532.1| endonuclease III [Clostridium hathewayi DSM 13479]
gi|288864609|gb|EFC96907.1| endonuclease III [Clostridium hathewayi DSM 13479]
Length = 191
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
L Y + L+V+V L+AQ TD VN + L+ + + + ++ ++ G+
Sbjct: 3 CTLDYDEAWKLLVSVRLAAQCTDARVNVVVQDLYAEYPDVEALAGAEVEDIEKIVKPCGL 62
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
K+ +I + IL ++D ++P + L +LPG+GRK AN+I+ FG P I DTH
Sbjct: 63 GHSKARDISACMKILKEQYDGRVPDDFDALLKLPGVGRKSANLIMGDVFGKPAIVTDTHC 122
Query: 161 FRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCII 218
R+ NR+GL K P KVE +L ++IPP+ + + LV HGR VC AR KP C+ C +
Sbjct: 123 IRLVNRMGLVEDLKDPKKVEMALWKLIPPEEGSDFCHRLVFHGRDVCTARTKPFCEKCCL 182
Query: 219 SNLC 222
++C
Sbjct: 183 KDIC 186
>gi|163867894|ref|YP_001609098.1| A/G-specific adenine glycosylase MutY [Bartonella tribocorum CIP
105476]
gi|161017545|emb|CAK01103.1| A/G-specific adenine glycosylase MutY [Bartonella tribocorum CIP
105476]
Length = 351
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
EI + L + + + + ++ ++ Q+T V K
Sbjct: 3 EISSHLLSWYDQNHRHLPWRITPEEQKQGIRPDPYQVWLSEIMLQQTTVETVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + ++ + +G Y ++ N+ + L+ + + PQ+++ L L
Sbjct: 63 KLWPDLSSLAKASQEDIMKAWAGLGYYS-RARNLKKCAKQLVENYAGQFPQSVKALRTLA 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I ++AF P VD ++ R+ R+ ++++ +I
Sbjct: 122 GIGDYTAAAIAAIAFNHPVAVVDGNVERVVARLFAITSILSKAKAEIKEQTQKITALNRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + +LCK K
Sbjct: 182 GDFAQAMMDLGATICTPRKPSCYICPLQSLCKAAK 216
>gi|315303519|ref|ZP_07874090.1| A/G-specific adenine glycosylase [Listeria ivanovii FSL F6-596]
gi|313628110|gb|EFR96672.1| A/G-specific adenine glycosylase [Listeria ivanovii FSL F6-596]
Length = 365
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ + + K L + + + + V+ ++ Q+ V +
Sbjct: 9 WDEEKITAFQKGLVSWYEANKRILPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMKQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T ++ + E + +G Y + N+ + ++ +F IP L + L G+
Sbjct: 69 FPTMERFVNADEAAILKAWEGLGYYS-RVRNLQTAMRQVMADFSGTIPNDLATILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEINEDIMKVSTRKIFEEVLYQLIDKDSP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC KP C C + + C+ K
Sbjct: 188 ASFNQGLMEIGALVCTPTKPMCLLCPLQSFCEAHK 222
>gi|163743382|ref|ZP_02150762.1| A/G-specific adenine glycosylase [Phaeobacter gallaeciensis 2.10]
gi|161383376|gb|EDQ07765.1| A/G-specific adenine glycosylase [Phaeobacter gallaeciensis 2.10]
Length = 357
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 16/207 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L + + + + ++ ++ Q+T V
Sbjct: 14 ILLEWYDQHARSLPWRISPADRAAGVWPDPYRIWLSEVMLQQTTVAAVKDYFHRFTSRWP 73
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y ++ N++ + ++ ++ P T +GL LPGIG
Sbjct: 74 TVADLAAAPDADVMAEWAGLGYYA-RARNLLKCARVVAQDYGGIFPNTYDGLIALPGIGP 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAH 195
A I ++AF +D ++ R+ R+ P ++++ + P + +
Sbjct: 133 YTAAAISAIAFDRQATVLDGNVERVMARLYDIHVPLPTSKPQLKEKAAALTPAERPGDHA 192
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 193 QAVMDLGATICTPRNPACGICPWRTPC 219
>gi|149376061|ref|ZP_01893827.1| A/G specific adenine glycosylase [Marinobacter algicola DG893]
gi|149359698|gb|EDM48156.1| A/G specific adenine glycosylase [Marinobacter algicola DG893]
Length = 354
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + N + + V+ ++ Q+ V + + + + +
Sbjct: 7 QKLLAWYDENGRHDLPWHHDRNPYRVWVSEIMLQQTQVTTVIPYFEAFMQRFPDVKALAS 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ +G Y ++ N+ + + NE + P LE L LPGIGR A IL
Sbjct: 67 APVDDVLSHWSGLGYYA-RARNLQKAAQQVANEHGGEFPGNLEQLQALPGIGRSTAAAIL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF +D ++ R+ R PG ++ + P + ++
Sbjct: 126 AQAFQQRAAILDGNVKRVLARYHAIPGWPGKTDVLNQLWERAEEHTPDARIRDYTQAIMD 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G VC +P C +C + N C
Sbjct: 186 LGAMVCTRSRPACDNCPLQNGCDAY 210
>gi|301059165|ref|ZP_07200106.1| A/G-specific adenine glycosylase [delta proteobacterium NaphS2]
gi|300446745|gb|EFK10569.1| A/G-specific adenine glycosylase [delta proteobacterium NaphS2]
Length = 358
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 80/207 (38%), Gaps = 9/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + + + F + V+ ++ Q+ V + + P +
Sbjct: 7 HEDLLNWYDKHQRSMPWRTTDDPFAIWVSEVMLQQTQVRTVIPYYRRFLKAFPNPLVLAQ 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++++ +G Y ++ N+ + + ++ +P E L LPGIG A +
Sbjct: 67 ATQQEVLKLWEGLGYYA-RARNLHRAAQKIAAQYGGTVPGRYEVLKTLPGIGDYIAAAVA 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+AFG P VD ++ R+ R L + ++ + + + ++
Sbjct: 126 SIAFGEPCAVVDGNVKRVLARFQLIDTPVNEPKAMKRFKERAEAFLDRSNPGRFNQAMME 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC P+C C ++ C+ +K+
Sbjct: 186 LGALVCTPSHPKCPDCPLNPTCRAVKE 212
>gi|315122204|ref|YP_004062693.1| endonuclease III [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495606|gb|ADR52205.1| endonuclease III [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 177
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 153/175 (87%), Positives = 169/175 (96%)
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
+AVLLSAQSTDVNVNKATK LF+IADTPQKMLAIGEK LQN+I+TIGIYR+K++NIISLS
Sbjct: 3 IAVLLSAQSTDVNVNKATKSLFDIADTPQKMLAIGEKNLQNHIKTIGIYRRKAKNIISLS 62
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
H LINEFD++IP+TLE LTRL GIGRKGANVILSMAFGIPTIGVDTHIFRI+NRIGLAPG
Sbjct: 63 HTLINEFDSEIPKTLEELTRLSGIGRKGANVILSMAFGIPTIGVDTHIFRIANRIGLAPG 122
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
KTPN+VEQSLLRIIP KHQYNAHYWLVLHGRYVCKARKPQCQSC+ISN+CKR++Q
Sbjct: 123 KTPNQVEQSLLRIIPQKHQYNAHYWLVLHGRYVCKARKPQCQSCVISNICKRVQQ 177
>gi|218782294|ref|YP_002433612.1| A/G-specific adenine glycosylase [Desulfatibacillum alkenivorans
AK-01]
gi|218763678|gb|ACL06144.1| A/G-specific adenine glycosylase [Desulfatibacillum alkenivorans
AK-01]
Length = 369
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 9/222 (4%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKAT 70
P + ++ + +L + + + + V+ ++ Q+ V
Sbjct: 1 MPETNAPKERPSKDFSRSLLRWYEENARDLPWRRTSDPYAIWVSEIMLQQTQVKTVIPYF 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ + + +G Y ++ N+ + +++ D ++P+T +GL
Sbjct: 61 LRWMDAFPNISSLAEAPLDDVLKMWEGLGYYS-RARNMHKAAKEIMDRLDGRMPRTYKGL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRI 185
LPGIG A + S+A+ VD ++ R+ RI ++ +
Sbjct: 120 LELPGIGAYTAGAVCSIAYNQDVPLVDANVKRVFARILDMEKPVEQTAATREIRGLAESL 179
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
IP + L+ G VC + P C+ C +S C +K+
Sbjct: 180 IPSGKAGLFNQALMELGALVCTPKNPDCKGCPVSVHCLALKE 221
>gi|115910653|ref|XP_791369.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 425
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 5/185 (2%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + T + + ++++ +G Y +
Sbjct: 15 AYAVWVSEIMCQQTQVATVIDYYNKWMKKWPTLESLSKASLEEVREVWAGLGYYSRGQRL 74
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR- 166
+ + LPG+GR A I S++F T VD ++ R+ +R
Sbjct: 75 FEGACKVQNELDGQIPGTAEQLRKELPGVGRYTAGAIASISFSEATGVVDGNVIRVLSRL 134
Query: 167 ----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ I+ P + + ++ G VC + PQC SC + + C
Sbjct: 135 RMIGADFTTQNVMTAIWDLANAIVDPDRPGDFNQSMMELGATVCHPKSPQCPSCPVQSHC 194
Query: 223 KRIKQ 227
+ I+Q
Sbjct: 195 RAIQQ 199
>gi|226224292|ref|YP_002758399.1| A/G-specific adenine glycosylase [Listeria monocytogenes Clip81459]
gi|225876754|emb|CAS05463.1| Putative A/G-specific adenine glycosylase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|332312131|gb|EGJ25226.1| A/G-specific adenine glycosylase protein [Listeria monocytogenes
str. Scott A]
Length = 365
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 69 FPTMEDFVQADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ + T E+ L ++I ++
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKVSTRKIFEEVLYQLIDKENP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 222
>gi|166031543|ref|ZP_02234372.1| hypothetical protein DORFOR_01243 [Dorea formicigenerans ATCC
27755]
gi|166028520|gb|EDR47277.1| hypothetical protein DORFOR_01243 [Dorea formicigenerans ATCC
27755]
Length = 628
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 10/221 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKA 69
P+ + EL E+ + + + +L + + + + V+ ++ Q+ V +
Sbjct: 272 QDPVPVILENPELYELSQVLVPWYQKARRDLPWRHTTDPYRIWVSEIMLQQTRVEAVKRY 331
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
E + + E KL +G Y + N+ + ++ +++ P+T E
Sbjct: 332 YARFMEALPNVNALANVEEDKLLKLWEGLGYYN-RVRNMQKAARQIMVDYNGTFPKTYEE 390
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLR 184
+ L GIG A I S +FG+P VD ++ R+ RI + T ++E+ L +
Sbjct: 391 IQSLTGIGNYTAGAISSFSFGLPYPAVDGNVLRVITRITADDSDIMKQSTRKQIEEKLKK 450
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKR 224
+IP + + L+ G VC P+C+ C + C+
Sbjct: 451 VIPKDCAGDFNQGLIELGAIVCVPNGEPKCEECPAAPFCQA 491
>gi|319956678|ref|YP_004167941.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
gi|319419082|gb|ADV46192.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
Length = 218
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 6/211 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+P+ E L +P+ +T++++ LLS Q+ D +A K L
Sbjct: 1 MSPERFRECLRLLEADYPNWDAPAKRFEKAYRRTPYTILISTLLSFQTRDEVTLEAGKRL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +ADTP+ ML + E+++ I +G +RKK+ I+ ++ L+ ++P TL LT +
Sbjct: 61 FALADTPEAMLGLSEEEIARTIYPVGFWRKKAAGILEVTRTLLERHGGEVPSTLSELTAI 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
GIG K A ++L A+G VDTH+ RI N +G+ +P +++L ++ P
Sbjct: 121 KGIGPKTAKIVLENAYGQSVAAVDTHVHRILNLLGVVETASPEATDKALEGLLEPGELKG 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +C+ R P C C I + C +
Sbjct: 181 LNKLLVSFGQAICRPRNPLCSRCPIRSCCPK 211
>gi|291297195|ref|YP_003508593.1| A/G-specific adenine glycosylase [Meiothermus ruber DSM 1279]
gi|290472154|gb|ADD29573.1| A/G-specific adenine glycosylase [Meiothermus ruber DSM 1279]
Length = 330
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 80/205 (39%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + L + + + ++++ +L Q+ + T + +
Sbjct: 5 LHSALLTWYQRHQRRLPWRGEPDPYRVLLSEVLLQQTRVEQAIPYYHRFLQRFPTLEALA 64
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ + + G Y + ++ +PQ+ GL LPGIG A +
Sbjct: 65 QAEQEAVLQVWQGCGYYTRARNLHRLAQQVVAAGGV--LPQSARGLRALPGIGPYTAAAV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP------PKHQYNAHYWL 198
S+AFG P VD ++ R+ +R+ TP +V+++ ++ + + L
Sbjct: 123 ASIAFGEPAAAVDGNVRRVLSRLLAWEHPTPKQVQEAADALLSALVQQKDARPGDWNQAL 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G VC + P C C ++ C+
Sbjct: 183 MELGATVCTPQNPGCGGCPVAAFCQ 207
>gi|319406874|emb|CBI80509.1| A/G-specific adenine glycosylase MutY [Bartonella sp. 1-1C]
Length = 352
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
EI L + L + + + + ++ ++ Q+T V K
Sbjct: 3 EISSLLLSWYDQNYRHLPWRMPPTKQIKGIYPDPYQIWLSEIMLQQTTVEAVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + + + +G Y ++ N+ + + L+ K PQ+LE L LP
Sbjct: 63 KLWPDLFSLSQASQDDIMKAWTGLGYYS-RARNLKNCATQLVKNHRGKFPQSLEILRTLP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I ++AFG P VD ++ RI R+ P ++++ L I K
Sbjct: 122 GIGDYTAAAIAAIAFGHPVAVVDGNVERIITRLFAITSILPKAKSEIKEKTLEITDVKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +CK RKP C C + NLC K
Sbjct: 182 GDFAQAMMDLGSTICKPRKPSCLLCPLQNLCTATK 216
>gi|254511371|ref|ZP_05123438.1| A/G-specific adenine glycosylase [Rhodobacteraceae bacterium KLH11]
gi|221535082|gb|EEE38070.1| A/G-specific adenine glycosylase [Rhodobacteraceae bacterium KLH11]
Length = 343
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 79/210 (37%), Gaps = 16/210 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ E+ + + + + ++ ++ Q+T V
Sbjct: 3 DALLAWYDRHAREMPWRIGPADRAAGVLPDPYRVWLSEVMLQQTTVAAVRDYFVRFTSRW 62
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A ++++ +G Y ++ N++ + I+ ++ + P + + L +LPGIG
Sbjct: 63 PTVDALAAAADEQVMGEWAGLGYYA-RARNLLKCARIVTSDHGGQFPDSYDALLQLPGIG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A I ++AF P +D ++ R+ R+ P ++ + P +
Sbjct: 122 PYTAAAIAAIAFDRPETVLDGNVERVMARLYDIHDPLPGSKPALKSKAAALTPQSRPGDY 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C + P C C + C+
Sbjct: 182 AQAVMDLGATICTPKSPACGICPLCQPCRA 211
>gi|238754620|ref|ZP_04615974.1| A/G-specific adenine glycosylase [Yersinia ruckeri ATCC 29473]
gi|238707251|gb|EEP99614.1| A/G-specific adenine glycosylase [Yersinia ruckeri ATCC 29473]
Length = 366
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ ++ + ++ + + ++ ++ Q+ V +
Sbjct: 1 MMQAQQFAQVVLDWYQRYGRKTLPWQQDKTPYQVWLSEVMLQQTQVATVIPYFQRFLARF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + A ++ + +G Y ++ N+ + ++ + + P T + + LPGIG
Sbjct: 61 PDVRILAAAPLDEILHLWTGLGYYA-RARNLHKAAQTIVAKHQGEFPTTFDEIADLPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS+A G +D ++ R+ R G +VE+ L ++ P K
Sbjct: 120 RSTAGAILSLALGQHFPILDGNVKRVLARCYAVDGWPGKKEVEKRLWQLSEEVTPAKGVG 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 QFNQAMMDLGAMVCTRSKPKCELCPLNTGCIAY 212
>gi|291549385|emb|CBL25647.1| A/G-specific adenine glycosylase [Ruminococcus torques L2-14]
Length = 361
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 10/213 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L+E + + +L + N + + ++ ++ Q+ V E
Sbjct: 17 ERLQETVEPLVEWFRENQRDLPWRKHVNAYRVWISEIMLQQTRVEAVKSYYTRFLEELPD 76
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + E +L +G Y ++ N+ + + ++ E++ P T E + +L GIG
Sbjct: 77 IKALAEVPEDRLLKLWEGLGYYN-RARNLKAAAQQVMEEYNGVFPDTFEEIKKLKGIGSY 135
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNA 194
A I S + VD ++FR+ RI + T K+E+ L ++IP + +
Sbjct: 136 TAGAISSFVYHQQKPAVDGNVFRVVTRILEDSDDIMKASTRTKIERMLEQVIPAEAPGDF 195
Query: 195 HYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+ L+ G VC P+C+SC I C +
Sbjct: 196 NQGLIELGAIVCLPNGEPKCESCPIREFCLAYQ 228
>gi|149921019|ref|ZP_01909479.1| A/G-specific adenine glycosylase [Plesiocystis pacifica SIR-1]
gi|149818151|gb|EDM77607.1| A/G-specific adenine glycosylase [Plesiocystis pacifica SIR-1]
Length = 378
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 11/221 (4%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNK 68
SP K + + + +L + + + + V+ ++ Q+ V
Sbjct: 2 SESPAS--LDEKTVRRVAKALGAWFKRDARDLPWRRTRDPYAIWVSEIMLQQTRVDTVEN 59
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ + T + + A ++ + +G YR +++ + + + E ++P T +
Sbjct: 60 YWQPFLDRFPTVESLAAAEQQAVLEAWSGLGYYR-RAKLLHRGAQYVHEELGGEVPGTAD 118
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSL---L 183
L +PGIGR A I S+AF P VD ++ R+ +R+ AP + K E
Sbjct: 119 ALRAIPGIGRYTAGAIASIAFDQPAPLVDGNVARVHSRLAAIEAPAEQDAKAEAHWRFVA 178
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ L+ G VC R P C +C + C+
Sbjct: 179 GVLEHGEPRVLAQALMELGATVCTPRSPTCLTCPVREHCRA 219
>gi|103487747|ref|YP_617308.1| HhH-GPD [Sphingopyxis alaskensis RB2256]
gi|98977824|gb|ABF53975.1| A/G-specific DNA-adenine glycosylase [Sphingopyxis alaskensis
RB2256]
Length = 333
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 30 YLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ L + + + + +A ++ Q+T V H E T
Sbjct: 5 ARLLGWYDRSARVLPWRIAPGRAEVPDPYRVWLAEVMLQQTTVAAVAGYFAHFTERWPTV 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A G+ ++ +G Y ++ N+++ + ++ E P + GL LPGIG
Sbjct: 65 ADLAAAGDAEVMAAWAGLGYYA-RARNLLACARAVVAEHGGCFPDSEAGLRALPGIGAYT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYW 197
A + ++AFG P + VD +I R+ R P + +L ++P +
Sbjct: 124 AAAVAAIAFGRPAVVVDANIERVIARHRCIETPLPAAKRAIRDALAPLVPGDRPGDFAQA 183
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ G +C R P C C I+ C+
Sbjct: 184 LMDLGATLCTPRAPVCARCPIAADCRA 210
>gi|332520145|ref|ZP_08396609.1| A/G-specific adenine glycosylase [Lacinutrix algicola 5H-3-7-4]
gi|332044704|gb|EGI80898.1| A/G-specific adenine glycosylase [Lacinutrix algicola 5H-3-7-4]
Length = 346
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K +L + N + + ++ ++ Q+ T +
Sbjct: 5 KKLTDWYLVSKRDLPWRNTTNPYYIWLSEIILQQTQVNQGLPYYNAFTSTFPTVFDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y ++ N+ + + ++NE + + P T + +L G+G A+ I S
Sbjct: 65 NETQVLKLWQGLGYYS-RARNLHASAKYIVNELNGEFPNTFSEIIKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ F T VD +++R R+ + GK + +I K+ + ++
Sbjct: 124 ICFNKVTAVVDGNVYRTLARLYDIDTPINTGKGFKVFKALAQELIDKKNPATFNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C C +N C +K+
Sbjct: 184 GARQCKPKSPDCTVCPFNNSCLALKK 209
>gi|325105834|ref|YP_004275488.1| A/G-specific adenine glycosylase [Pedobacter saltans DSM 12145]
gi|324974682|gb|ADY53666.1| A/G-specific adenine glycosylase [Pedobacter saltans DSM 12145]
Length = 353
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 75/205 (36%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + N + + ++ ++ Q+ E +
Sbjct: 5 DELIKWYRINKRDLPWRNTSDPYHIWLSEIILQQTRVEQGMPYYFRFAENFPDVKSFAEA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ +Y + +G Y + N++ + ++ E P L +L GIG A I S
Sbjct: 65 SEDQILHYWQGLGYYS-RGRNMLKTARKVMEEHRGIFPNNYAQLIKLVGIGEYTAAAISS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ VD +++R+ R + + + ++ ++ K+ + ++
Sbjct: 124 FSSNEAKAVVDGNVYRLLARHFGIDTPINTTQGKKQFQELANSLLNEKNAGEHNQAIIEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G CK + P C C ++ C +
Sbjct: 184 GALQCKPKNPNCDICPLNISCHAFQ 208
>gi|319403862|emb|CBI77448.1| A/G-specific adenine glycosylase MutY [Bartonella rochalimae ATCC
BAA-1498]
Length = 352
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
EI L + L + + + + ++ ++ Q+T V K
Sbjct: 3 EISSLLLSWYDQNYRHLPWRTPPTKQIKGIYPDPYQIWLSEIMLQQTTVEAVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + + + +G Y ++ N+ + + L+ K PQ++E L LP
Sbjct: 63 KLWPDLFSLSQASQDDIMKAWAGLGYYS-RARNLKNCATQLVKNHRGKFPQSVEILRTLP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I ++AFG P VD+++ RI R+ P ++++ L I K
Sbjct: 122 GIGDYTAAAIAAIAFGHPVAVVDSNVERIITRLFAITSILPKAKSEIKEKTLEITDVKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + NLC +K
Sbjct: 182 GDFAQAMMDLGSTICTPRKPSCLLCPLQNLCTAMK 216
>gi|84687975|ref|ZP_01015839.1| A/G-specific adenine glycosylase [Maritimibacter alkaliphilus
HTCC2654]
gi|84664007|gb|EAQ10507.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium
HTCC2654]
Length = 349
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + + ++ ++ Q+T V + T
Sbjct: 11 LLDWYDRHARDMPWRVGPADRAAGIAPDPYAVWMSEVMLQQTTVAAVRDYFTRFMALWPT 70
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++ +G Y ++ N++ + ++ E D P TL+GL LPGIG
Sbjct: 71 VHDLANAEDARVMGEWAGLGYYA-RARNLLKCARVVSRELDGAFPDTLDGLKALPGIGPY 129
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A I ++AF VD ++ R+ R+ P + + + P +
Sbjct: 130 TAAAIAAIAFDRSETVVDGNVERVMARLFCIEDPMPGSKPALRDAAATLTPKARPGDYAQ 189
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + P C C + C
Sbjct: 190 AVMDLGATICTPKSPACGICPWRDDC 215
>gi|228476987|ref|ZP_04061625.1| A/G-specific adenine glycosylase [Streptococcus salivarius SK126]
gi|228251006|gb|EEK10177.1| A/G-specific adenine glycosylase [Streptococcus salivarius SK126]
Length = 383
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 85/216 (39%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + ++ ++ Q+ V +
Sbjct: 10 IMWDAEKIASFRRTLLDWYDREKRDLPWRRTKNPYYIWISEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + E+KL +G Y + N+ + ++++FD + P T + + +L
Sbjct: 70 NWFPTVKDLAEAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMDDFDGQFPDTYDNIAKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AFG+P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFGLPEPAVDGNVMRVMARLFEVNYDIGDAKNRKIFQAIMDILIDPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|296207800|ref|XP_002750798.1| PREDICTED: A/G-specific adenine DNA glycosylase isoform 1
[Callithrix jacchus]
Length = 550
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSA 59
SP E+ + K +L + + + V+ ++
Sbjct: 79 ASVSPYHLFRDIAEVTAFRGSLLSWYDQKKRDLPWRRQAEDEVDLDRRAYAVWVSEVMLQ 138
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 139 QTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEKLG 198
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ +K+
Sbjct: 199 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATSVVDGNVARVLCRVRAIGADPSSKLV 258
Query: 179 ----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 259 SQQLWSLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 311
>gi|322373709|ref|ZP_08048245.1| A/G-specific adenine glycosylase [Streptococcus sp. C150]
gi|321278751|gb|EFX55820.1| A/G-specific adenine glycosylase [Streptococcus sp. C150]
Length = 383
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 85/216 (39%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 IMWDAEKIASFRRTLLDWYDREKRDLPWRRTKNPYYIWVSEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + + + A E+KL +G Y + N+ + ++ +F + P T + +++L
Sbjct: 70 DWFPSVRDLAAAQEEKLLKAWEGLGYYS-RVRNMQKAAQQIMEDFGGQFPDTYDDISKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEVNYDIGDAKNRKIFQAIMDILIDPN 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|224058042|ref|XP_002191220.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 501
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 16/219 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKAT 70
P E++ + + K +L + + + V+ ++ Q+ V
Sbjct: 42 PAEVQALRRNLLAWYDRCKRDLPWRTLAATEPDADRRGYAVWVSEIMLQQTQVATVIHYY 101
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ T Q + +++ +G Y + + ++ E
Sbjct: 102 NRWMQKWPTLQALAQASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPRTAEELQ 161
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSLLR---I 185
LPG+GR A I S+++G T VD ++ R+ R+ A +P +++ +
Sbjct: 162 KLLPGVGRYTAGAIASISYGQATGAVDGNVIRVLCRLRCIGADSSSPAVIDRLWDMANVL 221
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + + L+ G VC + P C+ C + C+
Sbjct: 222 VDRSRPGDFNQALMELGATVCVPKSPLCRECPVKQHCQA 260
>gi|302336472|ref|YP_003801679.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Olsenella uli DSM 7084]
gi|301320312|gb|ADK68799.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Olsenella uli DSM 7084]
Length = 231
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 1/211 (0%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ E +P + L + + F+L++ VLLSAQ+TDV VNK T LF
Sbjct: 3 RESKKLRRERAIEFCRRMGRLYPHVESALEFHDAFSLVICVLLSAQTTDVAVNKVTPELF 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
TP+ M +L IRTIG +R K+ + + S +++ ++ ++P ++E LTRLP
Sbjct: 63 RRWPTPEAMSQADPAELGEVIRTIGFWRSKAAHCVGASQMIVADYGGEVPGSMEELTRLP 122
Query: 135 GIGRKGANVILSM-AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++L+ + I VDTH++RI+ R+ L TP + E+ LL IP +
Sbjct: 123 GVGRKTANIVLNKAFHSVEGIAVDTHVYRIATRLRLTSAPTPLQAERDLLETIPRELWGP 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + GR C A+ +C++C+ +++C
Sbjct: 183 VNEQWIHFGRETCTAQHAKCEACVAADICPS 213
>gi|258510437|ref|YP_003183871.1| A/G-specific adenine glycosylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477163|gb|ACV57482.1| A/G-specific adenine glycosylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 382
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 9/209 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L + + +L + + + ++V+ + Q+ V E
Sbjct: 2 EESLAAFAHTLEAWYTQTSRDLPWRRTADPYAILVSETMLQQTRVETVIPYYHRFMERFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + + +G YR ++ N+ + ++ + +IP + L LPGIG
Sbjct: 62 TPLHLADADIDDVLKMWEGLGYYR-RARNLKAAMEVVRDRHGGRIPDHPDELKALPGIGP 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYN 193
+LS+AF P VD ++ R+ +R ++EQ + +
Sbjct: 121 YTLGAVLSIAFNRPYPAVDGNVLRVMSRYRAIEEPVDLPKVKRQIEQDVAETLERGTPRV 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G VC +KP+C +C + + C
Sbjct: 181 LTQALMELGALVCTPKKPRCSACPVVSGC 209
>gi|254471759|ref|ZP_05085160.1| A/G-specific adenine glycosylase [Pseudovibrio sp. JE062]
gi|211958961|gb|EEA94160.1| A/G-specific adenine glycosylase [Pseudovibrio sp. JE062]
Length = 350
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 16/211 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + + T
Sbjct: 7 LLYWYDRNSRQLPWRTAPADILSGVKPDPYHVWLSEIMLQQTTVAAVKSYFELFIKTWPT 66
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
M E+ + +G Y ++ N+ + + + + P+ E L +LPG+G
Sbjct: 67 LADMANAEEEDILKAWAGLGYYS-RARNLYKCAKYVQLHHNGRFPEEEERLLKLPGVGPY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
A I ++AFG VD ++ R+ +R + P +V+ + + P +
Sbjct: 126 TAAAISTIAFGRHAAVVDGNVERVLSRRHALLTELPALKAEVKPLMAEVTPHDRPGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C + P C C +C+ KQ
Sbjct: 186 AMMDLGATICTPKSPACGICPWMEVCEGRKQ 216
>gi|224131962|ref|XP_002321221.1| predicted protein [Populus trichocarpa]
gi|222861994|gb|EEE99536.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 28/233 (12%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFT--------------LIVAVLL 57
L++ KE ++I + + +L + F + V+ ++
Sbjct: 40 LFSDKETQKIRASLLEWYDHNQRDLPWRRITQTKETPFKEEEEEEEEERRAYGVWVSEVM 99
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V T + +++ +G YR+ + I+
Sbjct: 100 LQQTRVQTVIDYYNRWMLKWPTLHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKMIVAG 159
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
P+ + L ++PGIG A I S+AF VD ++ R+ R+ +K
Sbjct: 160 GDGF--PKIVSSLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDK 217
Query: 178 V-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
V + +++ P + + L+ G +C P C SC +S C+ +
Sbjct: 218 VTVKKFWKLAAQLVDPHRPGDFNQSLMELGATLCTPVNPSCSSCPVSGQCRAL 270
>gi|89896006|ref|YP_519493.1| hypothetical protein DSY3260 [Desulfitobacterium hafniense Y51]
gi|219670434|ref|YP_002460869.1| A/G-specific adenine glycosylase [Desulfitobacterium hafniense
DCB-2]
gi|89335454|dbj|BAE85049.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540694|gb|ACL22433.1| A/G-specific adenine glycosylase [Desulfitobacterium hafniense
DCB-2]
Length = 401
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 9/203 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ K +L + + + + V+ ++ Q+ V T +
Sbjct: 8 KLVQWFNQVKRDLPWRRTKDPYAIWVSEVMLQQTQVVTAIPYYLRFMGRFPTLSHLAEAE 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++++ R +G Y ++ + + ++ + ++P+ + L + G+G A I S+
Sbjct: 68 QEEVLELWRGLGYYS-RARRLWEGARYVVETAEGRMPKDYQSLLHIKGVGEYTAAAIASI 126
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAHYWLVLHG 202
A+ +D ++ R+ +RI + +IP + + ++ G
Sbjct: 127 AYEEQVPVMDGNVKRVLSRILRWEEDVEKARSRRFFLEYLGEVIPGDCPGDFNQGMMELG 186
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
VC + P+C+ C + C+
Sbjct: 187 ATVCTPKHPRCEQCPLQADCEGF 209
>gi|312898523|ref|ZP_07757913.1| A/G-specific adenine glycosylase [Megasphaera micronuciformis
F0359]
gi|310620442|gb|EFQ04012.1| A/G-specific adenine glycosylase [Megasphaera micronuciformis
F0359]
Length = 352
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 31 LFSLKWPSPKGELYYV-----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + L + + + + V+ ++S Q+ V + E + ++ A
Sbjct: 10 LLLEWFSKNRRPLPWRSEGKRDPYAVWVSEVMSQQTKVETVKPYYESWMEQFPSVAELAA 69
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E+ + + +G Y +++N+++ + N++ IP L L G+G A I
Sbjct: 70 ADEQDVLRQWQGLGYYS-RAKNLLTAVREVQNKYGGVIPSEKAELLTLKGVGDYTAGAIS 128
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+A+ P VD ++ R+ R+ + +V + + IPP + + L+
Sbjct: 129 SLAYNRPVAAVDGNVLRVLARLYKIEENILSTNVKKEVTRLVESQIPPGRAGDFNEALME 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G +C + P+C C +++ C+
Sbjct: 189 FGAVICIPKYPRCSDCPLADFCEA 212
>gi|325294609|ref|YP_004281123.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065057|gb|ADY73064.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 218
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 6/211 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ +I + + + + F +++A +LS ++ D KA L
Sbjct: 1 MKDDSIHDIVKILRKETKKWNTPIVSLMSQTERDPFKILIATVLSLRTKDEITAKAANKL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F++AD P ML + E+++ + I +G YR+K++NI + +LI +++ K+P ++ L +L
Sbjct: 61 FQVADNPYDMLKLKEEEIASLIYPVGFYRRKAKNIKEICKVLIEKYNGKVPDEIDELLKL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK AN+++++ +G P I VDTH+ RISNR+G KTP + E +L +P +
Sbjct: 121 PGVGRKTANLVVTLGYGKPGICVDTHVHRISNRLGYVNTKTPEETEFALREKLPKDYWIE 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+++C P+C C I C +
Sbjct: 181 INDLLVSLGQHICHPTSPKCSQCPIEKYCDK 211
>gi|332665469|ref|YP_004448257.1| A/G-specific adenine glycosylase [Haliscomenobacter hydrossis DSM
1100]
gi|332334283|gb|AEE51384.1| A/G-specific adenine glycosylase [Haliscomenobacter hydrossis DSM
1100]
Length = 361
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 9/209 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L + + + + ++ ++ Q+ E + +
Sbjct: 5 HFFQRGLIAWYQPEDRPLPWKGIQDPYHIWLSEIILQQTRVEQGMNYYLRFVEAYPSIRD 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + ++ +G Y ++ N+++ + + E P T G+ L G+G A
Sbjct: 65 LAAAPDDEVMKLWEGLGYYS-RARNLLAAARYVTTELGGVFPTTYTGILALKGVGAYTAA 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYW 197
I S AF +P VD ++FR+ R + Q ++ +
Sbjct: 124 AIASFAFNLPHAVVDGNVFRVLARFFGISTPQDSTAGKKEFTQLAESLLQRDQPALYNQA 183
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G VC R P+C C + C ++
Sbjct: 184 IMDFGATVCLPRNPKCGQCPLRTECVALR 212
>gi|126730851|ref|ZP_01746660.1| A/G-specific adenine glycosylase [Sagittula stellata E-37]
gi|126708567|gb|EBA07624.1| A/G-specific adenine glycosylase [Sagittula stellata E-37]
Length = 352
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 80/219 (36%), Gaps = 20/219 (9%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNV 66
+ P + + + +L + + + + ++ ++ Q+T V
Sbjct: 1 MRDPADAAD----LLQWYDRHARDLPWRVGPSARAKGIAPDPYRIWLSEIMLQQTTVAAV 56
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ E T + A + ++ +G Y ++ N++ + ++ E P
Sbjct: 57 KDYFRLFTERWPTVDALAAAPDAEVMAAWAGLGYYA-RARNLLKCARVVAEETGGVFPAD 115
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLL 183
+ L LPG+G A I ++AF +P + VD ++ R+ R+ P +
Sbjct: 116 HDVLLTLPGVGPYTAAAISAIAFDVPRVVVDGNVERVMARLHDEHTPLPAAKPILTAYAA 175
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + ++ G +C ++P C C C
Sbjct: 176 ALTPNARPGDYAQAVMDLGATICTPKRPACGLCPWRTSC 214
>gi|325663777|ref|ZP_08152178.1| hypothetical protein HMPREF0490_02919 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470110|gb|EGC73344.1| hypothetical protein HMPREF0490_02919 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 594
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 10/230 (4%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQST 62
K D + + L PKEL+ + + K L + + + + V+ ++ Q+
Sbjct: 212 KKDEIKIRKEVPVLLEPKELQALADPLVEWFRKHKRALPWREDPSAYRVWVSEIMLQQTR 271
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + T +K+ E+KL +G Y + N+ + +++EF +
Sbjct: 272 VEAVRPFYARFMKELPTVEKLAVAEEEKLLKLWEGLGYYN-RVRNMQKAARQIMDEFSGE 330
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----K 177
P+ E + L GIG A I S A+GIP VD ++ R+ +RI + K
Sbjct: 331 FPRQYEQIRSLSGIGSYTAGAIASFAYGIPKPAVDGNVLRVLSRILASEDDIMKQSTKTK 390
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+E L +IP + + + L+ G +C +C+ C + +LC+ K
Sbjct: 391 IEYMLEGVIPKEAASDFNQGLIELGALICVPNGMAKCEECPVKHLCRARK 440
>gi|326792676|ref|YP_004310497.1| A/G-specific adenine glycosylase [Clostridium lentocellum DSM 5427]
gi|326543440|gb|ADZ85299.1| A/G-specific adenine glycosylase [Clostridium lentocellum DSM 5427]
Length = 344
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + K ++ + + + + V+ ++ Q+ V V E +
Sbjct: 5 DLILEWFDKNKRDMPWRRTSDPYCIWVSEVMLQQTQVVTVIPYYLRFIERFPNVSALAEA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ NY + +G YR + EN+ + ++++++ + P+ + + +PGIG I S
Sbjct: 65 SLEEVHNYWQGLGYYR-RGENLWKGAKLIVDKWQGEFPRDPKLIKEIPGIGPYTLGAICS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+A +P VD ++ RI R +A K E ++ ++P + L+
Sbjct: 124 IALHLPLPAVDGNVMRILARQFCIGEDIANPKNRKLFEDKVMELMP-NDPNRFNQALMEL 182
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C + P C+ C + +C+ ++
Sbjct: 183 GALICTPKNPNCKECPMKPICEAYQK 208
>gi|167623088|ref|YP_001673382.1| A/G-specific adenine glycosylase [Shewanella halifaxensis HAW-EB4]
gi|167353110|gb|ABZ75723.1| A/G-specific adenine glycosylase [Shewanella halifaxensis HAW-EB4]
Length = 354
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + +L + + + ++ ++ Q+ V + + +
Sbjct: 10 RIIQWYDNFGRKQLPWQLNKTPYKVWISEIMLQQTQVATVIPYFEKFIARFPDIDSLASA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + I+ +EF++ P + + LPGIGR A +LS
Sbjct: 70 EQDEVLHHWTGLGYYA-RARNLHKAAQIMQSEFNSTFPTDFDHVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLH 201
++ G+ +D ++ R+ R G G K VEQ+L + P K + ++
Sbjct: 129 LSLGLNFAILDGNVKRVLARHGAIEGWPGKKTVEQALWLLTEALTPAKDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G VC KP C C ++ CK
Sbjct: 189 GATVCTRSKPNCAQCPVAIDCKA 211
>gi|291288305|ref|YP_003505121.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
gi|290885465|gb|ADD69165.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
Length = 219
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGE-------LYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
++ E++ + + + + F ++++ L+S ++ D A+
Sbjct: 1 MKKSDIHEVYEILEDVYRNMDEPSVTKISKQTRRDPFRVLISCLISLRTKDEVTLAASNR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LF ADTP+KML I ++ I G Y+ KS I ++ IL++E+D K+P ++ L +
Sbjct: 61 LFAKADTPEKMLTIPADEIAKLIYPAGFYKTKSNTITNICRILLDEYDGKVPDEIDELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN+++ +G I VDTH+ RI NR+G KTP+K E L + +P K+
Sbjct: 121 LKGVGRKTANLVVVEGYGRDAICVDTHVHRIFNRLGYVATKTPDKTEMELRKHLPIKYWI 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV +GR +C P C C +S++C ++
Sbjct: 181 RINEILVSYGREICTPVSPHCSYCRLSDICDKV 213
>gi|120556086|ref|YP_960437.1| A/G-specific adenine glycosylase [Marinobacter aquaeolei VT8]
gi|120325935|gb|ABM20250.1| A/G-specific adenine glycosylase [Marinobacter aquaeolei VT8]
Length = 354
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 10/211 (4%)
Query: 26 EEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + N + + V+ ++ Q+ V +
Sbjct: 3 DRFADKLLRWYDQHGRHDLPWHHNRNAYRVWVSEIMLQQTQVTTVIPYFEAFMARFPDVH 62
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + + + +G Y ++ N+ + +++EF + P + L L GIGR A
Sbjct: 63 ALASAPVDDVLGHWSGLGYYA-RARNLHKAAKQVVDEFGGEFPADQKQLENLTGIGRSTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHY 196
I++ AF +D ++ R+ R PG N++ + P +
Sbjct: 122 AAIVAQAFEKRATILDGNVKRVLARYHAVPGWPGQAAVLNQLWEHAESHTPEARIKDYTQ 181
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC KP C++C +++ C +
Sbjct: 182 AIMDLGAMVCTRSKPGCEACPLNDGCLAYAR 212
>gi|225026125|ref|ZP_03715317.1| hypothetical protein EUBHAL_00366 [Eubacterium hallii DSM 3353]
gi|224956562|gb|EEG37771.1| hypothetical protein EUBHAL_00366 [Eubacterium hallii DSM 3353]
Length = 522
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 25/246 (10%)
Query: 5 KKSDSYQGNSPLGCLYTPKEL-EEIFYL--------------FSLKWPSPKGELYYV--- 46
+K+ SP ++ ++L E + + L +
Sbjct: 138 RKAKKLPSTSPANAAFSIEKLTNEWKEICGPLQVAPAGIGGVLLNWYDYNARILPWRSDP 197
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + ++ ++ Q+ V K E + + + + +L +G Y ++
Sbjct: 198 TPYHVWISEIMLQQTRVEAVKKYYDRWMESLPDVKALAEVPDDELMKLWEGLGYYN-RAR 256
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + ++ EFD +IP L L GIG A I S+AFGIP VD + RI +R
Sbjct: 257 NLKAAAVQIMEEFDGEIPSDYSKLLSLRGIGEYTAGAIASIAFGIPESAVDGNALRIFSR 316
Query: 167 IGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISN 220
I G+ K+ Q + R++P + + + L+ G +C P C++C +
Sbjct: 317 ILAEDGEINKTSVKKKITQEVRRVLPEERPGDFNQALMDLGSSICIPNGEPFCENCPWES 376
Query: 221 LCKRIK 226
+CK K
Sbjct: 377 ICKAHK 382
>gi|291298627|ref|YP_003509905.1| HhH-GPD family protein [Stackebrandtia nassauensis DSM 44728]
gi|290567847|gb|ADD40812.1| HhH-GPD family protein [Stackebrandtia nassauensis DSM 44728]
Length = 300
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ EL + + ++V+ ++S Q+ V TP
Sbjct: 22 WFAENGRELPWRTPETTAWGVLVSEVMSQQTPVARVAPIWTEWMGRWPTPADFADAPAAD 81
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G R+ + + ++ IP ++ L LPGIG A + A+
Sbjct: 82 VLRAWGRLGYPRRALR-LHECAKAVVERHGGVIPDDVDALLALPGIGTYTARAVAVFAYR 140
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVE----QSLLRIIP--PKHQYNAHYWLVLHGRY 204
VDT++ R+ R A + + ++P P+ L+ G
Sbjct: 141 QRHPVVDTNVRRVVARWAHAKPDAGHATTTADLRDAEALLPSEPEEAARLSVALMELGAL 200
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR P+C C I+ C
Sbjct: 201 VCTARSPRCGDCPIARDC 218
>gi|94496125|ref|ZP_01302703.1| HhH-GPD [Sphingomonas sp. SKA58]
gi|94424304|gb|EAT09327.1| HhH-GPD [Sphingomonas sp. SKA58]
Length = 356
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 12/215 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ +I + L + + + + ++ ++ Q+T V
Sbjct: 1 MRVEGRESKIAGALLAHYDVHARRLPWRAPPGTNASDPYRVWLSEVMLQQTTVAAVGPYF 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
T +++ A + + +G Y ++ N++S + ++ + D + P + EGL
Sbjct: 61 ARFTTSWPTVEELAAAQDADVMAAWAGLGYYA-RARNLLSCARAVVRDHDGRFPDSEEGL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR---IIP 187
LPG+G A + ++AFG + VD ++ R+ R+ P I P
Sbjct: 120 RGLPGVGAYTAAAVAAIAFGRRAVVVDANVERVVARLFAIDTPLPAARSAIRAAADRITP 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C R P C C + C
Sbjct: 180 DARAGDFAQAMMDLGATICTPRNPACGICPLRQDC 214
>gi|114570745|ref|YP_757425.1| A/G-specific DNA-adenine glycosylase [Maricaulis maris MCS10]
gi|114341207|gb|ABI66487.1| A/G-specific DNA-adenine glycosylase [Maricaulis maris MCS10]
Length = 350
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 17/215 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV-------------NHFTLIVAVLLSAQSTDVNVNKAT 70
++ + + L + + + + ++ ++ Q+T +
Sbjct: 4 DIARLRRQLLAWYDQEGRTLPWRIRPEDRIAGGPVADPYAIWLSEIMLQQTTVPHATPYW 63
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ T Q + + +G Y ++ N+ + + + + D + P TL+GL
Sbjct: 64 HRFLSLWPTVQDLAVAPRDDVLREWAGLGYYA-RARNLHACAIEVATDHDGQFPDTLDGL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIP 187
LPGIG AN IL+ AF P VD ++ R+ R+ P +V + I
Sbjct: 123 RSLPGIGDYTANAILAAAFDKPASVVDGNVERVITRLHRVETAMPKAKPEVRKLAAAIAD 182
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P + ++ G VC RKP C +C S C
Sbjct: 183 PDRSGDYAQAIMDLGATVCTPRKPDCSACCWSFAC 217
>gi|297278567|ref|XP_002801572.1| PREDICTED: a/G-specific adenine DNA glycosylase [Macaca mulatta]
Length = 523
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSA 59
SP E+ + K +L + + + + V+ ++
Sbjct: 52 ASVSPYHLFRDIAEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQ 111
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 112 QTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELG 171
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ + +
Sbjct: 172 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLV 231
Query: 179 -EQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 232 SQRLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 284
>gi|332522283|ref|ZP_08398535.1| A/G-specific adenine glycosylase [Streptococcus porcinus str.
Jelinkova 176]
gi|332313547|gb|EGJ26532.1| A/G-specific adenine glycosylase [Streptococcus porcinus str.
Jelinkova 176]
Length = 380
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 84/215 (39%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + + K +L + N + + V+ ++ Q+ V +
Sbjct: 11 IWPEDKIADFRRTLLNWYDQEKRDLPWRRTKNPYHIWVSEIMLQQTQVQTVIPYYHRFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T ++ E++L +G Y + N+ + ++ F P T + +T+L G
Sbjct: 71 QFPTVAELAVANEERLLKAWEGLGYYS-RVRNMQKAAQQIMTSFKGNFPSTYQEITQLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ R + K + + ++I P+
Sbjct: 130 IGPYTAGAIASIAFNLPQPAVDGNVMRVMARLFEVDYDIGDPKNRKIFQSLMEKLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|282883166|ref|ZP_06291765.1| endonuclease III [Peptoniphilus lacrimalis 315-B]
gi|281296978|gb|EFA89475.1| endonuclease III [Peptoniphilus lacrimalis 315-B]
Length = 230
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E EI +P + EL + N++ L+ AV+LSAQ+TD +VNK + LFE
Sbjct: 5 ILNSQEALEILKALIKLYPQNQPELEFKNNYELLCAVVLSAQTTDKSVNKISPILFERYP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M ++Q I++IG+ + KS+ + LS L+ F+ ++P T + L L G+GR
Sbjct: 65 RVEDMADADVNEIQEIIKSIGLSKNKSKYLKELSIELLENFNGQVPSTRKELMSLSGVGR 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ AF IP VDTH+ RI ++ +VE+ +++ IP K+ AH+
Sbjct: 125 KTANVLLANAFDIPAFAVDTHVNRICKKLKFVKEDLNVLQVEEEMMKKIPDKYWKQAHHS 184
Query: 198 LVLHGRYVCKARKPQCQSCIIS 219
++L GR+ C A+ C++
Sbjct: 185 ILLFGRHQCVAKNHDHSICLLR 206
>gi|297278565|ref|XP_002801571.1| PREDICTED: a/G-specific adenine DNA glycosylase [Macaca mulatta]
gi|297278569|ref|XP_002801573.1| PREDICTED: a/G-specific adenine DNA glycosylase [Macaca mulatta]
Length = 522
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSA 59
SP E+ + K +L + + + + V+ ++
Sbjct: 51 ASVSPYHLFRDIAEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQ 110
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 111 QTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELG 170
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ + +
Sbjct: 171 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLV 230
Query: 179 -EQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 231 SQRLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 283
>gi|295687796|ref|YP_003591489.1| A/G-specific adenine glycosylase [Caulobacter segnis ATCC 21756]
gi|295429699|gb|ADG08871.1| A/G-specific adenine glycosylase [Caulobacter segnis ATCC 21756]
Length = 359
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + + + ++ ++ Q+T + + T + A+ + L
Sbjct: 33 PDERRAGVRSDPYRVWLSEVMLQQTTVPHATPYFLSFTQRWPTVSDLAAVEDGDLMAAWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+++ + + ++ P T EGL LPG+G A + ++AF V
Sbjct: 93 GLGYYA-RARNLLACARAVADQHGGVFPDTEEGLRALPGVGAYTAAAVAAIAFDRAANVV 151
Query: 157 DTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ +R+ P+ +++ ++ + + L+ G VCK + P C
Sbjct: 152 DGNVERVMSRLFAVETPLPDAKPELKALAGDLVTDERPGDWAQALMDLGATVCKPKGPLC 211
Query: 214 QSCIISNLCKRIK 226
C +S C+ K
Sbjct: 212 DRCPVSAWCEAFK 224
>gi|163760357|ref|ZP_02167439.1| A/G-specific adenine glycosylase [Hoeflea phototrophica DFL-43]
gi|162282308|gb|EDQ32597.1| A/G-specific adenine glycosylase [Hoeflea phototrophica DFL-43]
Length = 360
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 83/237 (35%), Gaps = 31/237 (13%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV------------NH 48
M S+K S G +P + L + +
Sbjct: 1 MSSAKPSPISAGIAPP---------------LLAWYDRHARTLPWRVSPEDREHGVVADP 45
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + ++ ++ Q+T V T + A + +G Y ++ N+
Sbjct: 46 YRVWLSEIMLQQTTVQAVKSYFDVFVRRWPTVNDLAAADTGDVMKAWAGLGYYS-RARNL 104
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ + EF PQT EGL LPGIG A I ++AF +P VD +I R+ R+
Sbjct: 105 KKCADQVATEFGGVFPQTEEGLRALPGIGPYTAAAIAAIAFDVPAAVVDGNIERVFTRLF 164
Query: 169 LAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P ++ + P + + L+ G +C ++P C C + C
Sbjct: 165 EIDTPLPSAKPEITTLVGSATPDERPGDFAQALMDLGATICTPKRPACALCPLDEGC 221
>gi|307941618|ref|ZP_07656973.1| A/G-specific adenine DNA glycosylase [Roseibium sp. TrichSKD4]
gi|307775226|gb|EFO34432.1| A/G-specific adenine DNA glycosylase [Roseibium sp. TrichSKD4]
Length = 370
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 83/210 (39%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + + T
Sbjct: 24 LLTWYDHHARDLPWRVSPSDRAVGVIPDPYQVWLSEVMLQQTTVAAVKEYFLKFVRLWPT 83
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A E+ + +G Y ++ N+ + ++ +E + + P T L +LPGIG
Sbjct: 84 VSDLAAATEEDVMKAWAGLGYYS-RARNLKKCAEVVASEHEGQFPSTEAELLKLPGIGPY 142
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
A I ++AF VD ++ R+ +R + P ++ + R+ P +
Sbjct: 143 TAAAIAAIAFDQRAAVVDGNVERVLSRYFEITEQLPAAKVPIKAEMARLTPSDRPGDFAQ 202
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C ++P C C N CK +
Sbjct: 203 AVMDIGATICTPKRPACALCPWMNNCKARQ 232
>gi|327438705|dbj|BAK15070.1| A/G-specific DNA glycosylase [Solibacillus silvestris StLB046]
Length = 352
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 9/210 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + + +L + + + V+ ++ Q+ V E T +
Sbjct: 7 KQFRQALVQWFLEEQRDLPWRRTKEPYQIWVSEVMLQQTRVDTVIPYYNRFIEKYPTAES 66
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E++L +G Y + N+ + ++ + K+P +++L G+G A
Sbjct: 67 LAYSPEEELLKMWEGLGYYS-RVRNLQAGVREVVEVYGGKVPDNRVDISKLKGVGPYTAG 125
Query: 143 VILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
ILS+A+G P VD ++ R+ +R+ +A KT EQ++ +I ++ + +
Sbjct: 126 AILSIAYGKPEHAVDGNVMRVLSRVLNIDADIALPKTKKIFEQAVTELIDHENASSFNQG 185
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P+C C + + C +
Sbjct: 186 LMELGALICTPTSPKCLLCPVRDYCTAFHE 215
>gi|297278562|ref|XP_001101555.2| PREDICTED: a/G-specific adenine DNA glycosylase isoform 3 [Macaca
mulatta]
Length = 537
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSA 59
SP E+ + K +L + + + + V+ ++
Sbjct: 66 ASVSPYHLFRDIAEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQ 125
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 126 QTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELG 185
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ + +
Sbjct: 186 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLV 245
Query: 179 -EQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 246 SQRLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 298
>gi|170079332|ref|YP_001735970.1| A/G-specific adenine glycosylase [Synechococcus sp. PCC 7002]
gi|169887001|gb|ACB00715.1| A/G-specific adenine glycosylase [Synechococcus sp. PCC 7002]
Length = 348
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLF 74
++T + L E+ + L + N + + V+ ++ Q+ V +
Sbjct: 2 AIWTAEILAEMRRSLLDWYQQAGRTLPWRNEPDIYRVWVSEIMLQQTQVKTVIPYYERWL 61
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + A + + +G Y ++ N+ + ++ +F + P+ L+ + L
Sbjct: 62 AQFPTVEALAAADLQAVLKQWEGLGYYA-RARNLHQAAQQVVTDFAGQFPKDLDKMLCLK 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR----IIPPKH 190
GIGR A ILS A +P +D ++ R+ R+ +A P K L ++ P++
Sbjct: 121 GIGRTTAGGILSSARNLPLAILDGNVKRVLARL-IALEVPPAKALNELWDVSETLLDPEN 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G +C + P C C N C
Sbjct: 180 PRDFNQALMDLGATLCMVKNPDCPRCPWQNHCTAY 214
>gi|37520435|ref|NP_923812.1| A/G-specific adenine glycosylase [Gloeobacter violaceus PCC 7421]
gi|35211429|dbj|BAC88807.1| A/G-specific adenine glycosylase [Gloeobacter violaceus PCC 7421]
Length = 375
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 8/208 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P+++ + + +L + + + + ++ ++ Q+ V +
Sbjct: 16 PEQVVRLRAQLLEWYGRMGRDLPWRRTRDPYAIWISEIMLQQTQVKTVLPYYQRWLAALP 75
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y + + I+ + LPGIGR
Sbjct: 76 TVAALAAAELEAVLKLWEGLGYYTRARNLHKAAQVIVKEHGGVFPETAQQLQQALPGIGR 135
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL----RIIPPKHQYNA 194
A I S AFG +D + R+ A G P + E L R++ P+ +N
Sbjct: 136 STAGAIASSAFGRCEAILDANARRVL-GRLFAVGDPPARAEAKLWEISQRLVDPQAPHNF 194
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G VC AR P C C C
Sbjct: 195 NQALMDLGATVCTARSPLCLLCPWQVDC 222
>gi|284049194|ref|YP_003399533.1| A/G-specific adenine glycosylase [Acidaminococcus fermentans DSM
20731]
gi|283953415|gb|ADB48218.1| A/G-specific adenine glycosylase [Acidaminococcus fermentans DSM
20731]
Length = 352
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 30 YLFSLKWPSPKGELYYV-----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + N + + V+ ++ Q+ V + E T + +
Sbjct: 8 ETLLAWFDGSRRALPWREEHPRNPYHVWVSEIMLQQTRTETVKGYFQRWMEQFPTIRDLA 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ + +G Y ++ N+ + ++ E+ ++P+ + L L GIG I
Sbjct: 68 QAPEEQVLRAWQGLGYYS-RARNLHKAARQVMAEWGGQLPRERKALGSLAGIGAYTVGAI 126
Query: 145 LSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
LSMAFG VD ++ R+ +R+ ++ + + IP + + L+
Sbjct: 127 LSMAFGEKIPAVDGNLLRVLSRLYGVEEDISGTQGKKTITALAEEAIPGDRPGDFNEALM 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC R P+C++C ++ C+ K+
Sbjct: 187 DLGAEVCIPRHPRCEACPLTAFCQAWKE 214
>gi|226953304|ref|ZP_03823768.1| A/G specific adenine glycosylase [Acinetobacter sp. ATCC 27244]
gi|226835930|gb|EEH68313.1| A/G specific adenine glycosylase [Acinetobacter sp. ATCC 27244]
Length = 344
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T Q +
Sbjct: 8 DALLAWYDQHGRHDLPWQIADDPYKVWVSEIMLQQTQVKTVLQYFDRFIERFPTVQDLGQ 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ Y +G Y + + + P+ LE LPGIGR A ++
Sbjct: 68 ASWDDVAPYWAGLGYYARARNLHKAAGIVSQRGKF---PEILEQWIELPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + + Q + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHERALWQIAEDLCPQQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC +KP C C + C+ +Q
Sbjct: 185 LGATVCTPKKPLCLYCPMQQHCQAYQQ 211
>gi|315225216|ref|ZP_07867033.1| A/G-specific adenine glycosylase [Capnocytophaga ochracea F0287]
gi|314944899|gb|EFS96931.1| A/G-specific adenine glycosylase [Capnocytophaga ochracea F0287]
Length = 339
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 80/206 (38%), Gaps = 9/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + + + L + N + + ++ ++ Q+ V + T +
Sbjct: 5 IINKLTSWYKVAQRSLPWRGTANPYKVWLSEVILQQTRVVQGLPYYQRFISRYPTVTDLA 64
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ + +G Y +++N+ + + E P+T + L +L GIG A+ I
Sbjct: 65 NAPEEEVLKLWQGLGYYS-RAKNLHHTAQYIATELGGVFPKTYKELVKLKGIGDYTASAI 123
Query: 145 LSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
S + P VD +++R+ +R + + + + + + + L+
Sbjct: 124 ASFCYNEPCAVVDGNVYRVLSRLFGIATPINSPQGAKEFKALAYECLDKHNPGTYNQALM 183
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G C + P C +C++ + C
Sbjct: 184 EFGALQCTPQSPDCANCVLRDHCWAF 209
>gi|326925304|ref|XP_003208857.1| PREDICTED: A/G-specific adenine DNA glycosylase-like, partial
[Meleagris gallopavo]
Length = 407
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 16/215 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV-----------NHFTLIVAVLLSAQSTDVNVNKATKH 72
E++ + + + +L + + + V+ ++ Q+ V
Sbjct: 8 EIDALRGRLLTWYDKSRRDLPWRALAAAEPDADRRAYAVWVSEIMLQQTQVATVIDYYNR 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ T + + A +++ +G Y + + ++ +
Sbjct: 68 WMQKWPTLEALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPRTAEDLQRL 127
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIP 187
LPG+GR A I S++FG T VD ++ R+ R+ T + L ++
Sbjct: 128 LPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLWNMANILVD 187
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + L+ G VC + P C C + C
Sbjct: 188 RSRPGDFNQALMELGATVCTPKSPLCGECPVKEHC 222
>gi|115972605|ref|XP_001196919.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 374
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 5/185 (2%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + T + + ++++ +G Y +
Sbjct: 15 AYAVWVSEIMCQQTQVATVIDYYNKWMKKWPTLESLSKASLEEVREVWAGLGYYSRGQRL 74
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ + LPG+GR A I S++F T VD ++ R+ +R+
Sbjct: 75 FEGACKVQNELDGQIPGTAEQLRKELPGVGRYTAGAIASISFSEATGVVDGNVIRVLSRL 134
Query: 168 G-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ I+ P + + ++ G VC + PQC SC + + C
Sbjct: 135 RMIGADFTTQNVMTAIWDLANAIVDPDRPGDFNQSMMELGATVCHPKSPQCPSCPVQSHC 194
Query: 223 KRIKQ 227
+ I+Q
Sbjct: 195 RAIQQ 199
>gi|146299295|ref|YP_001193886.1| A/G-specific adenine glycosylase [Flavobacterium johnsoniae UW101]
gi|146153713|gb|ABQ04567.1| A/G-specific adenine glycosylase [Flavobacterium johnsoniae UW101]
Length = 344
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 80/208 (38%), Gaps = 9/208 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ K +L + N + + ++ ++ Q+ V + T +
Sbjct: 3 FHNRLIKWYLQNKRDLPWRKTANPYHIWLSEIMLQQTRVVQGMPYFFAFTQEFPTVFDLA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ + +G Y ++ N+ + + + E + P+T + L L G+G A I
Sbjct: 63 NASEEQVLKLWQGLGYYS-RARNLHNTAKYIAYELNGVFPETYKELLNLKGVGEYTAAAI 121
Query: 145 LSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
S ++ VD ++FR+ +R +A + + ++P + ++
Sbjct: 122 ASFSYNEAVPVVDGNVFRVLSRYFDIESDIALPASKKEFAALAYELMPKNDPATFNQAIM 181
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C CI + C +++
Sbjct: 182 EFGALQCVPKSPNCTICIFNESCLALQK 209
>gi|227821135|ref|YP_002825105.1| putative A/G-specific adenine glycosylase [Sinorhizobium fredii
NGR234]
gi|227340134|gb|ACP24352.1| putative A/G-specific adenine glycosylase [Sinorhizobium fredii
NGR234]
Length = 362
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 81/210 (38%), Gaps = 16/210 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + +L + + + + ++ ++ Q+T V +
Sbjct: 14 LLLDWYDRHHRDLPWRVSPPMAARGAVADPYHVWLSEVMLQQTTVQAVKAYFDKFLRLWP 73
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A +++ +G Y ++ N+ + ++ E + P EGL LPG+G
Sbjct: 74 RVEDLAAAETEEVMKAWAGLGYYA-RARNLKKCAEVVAREHGGRFPDREEGLKSLPGVGD 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAH 195
A I ++AF + +D ++ R+ +R+ P ++ + + + P +
Sbjct: 133 YTAAAIAAIAFNRHSAVLDGNVERVISRLYAIETPLPAAKPEMRRLVSELTPLDRPGDFA 192
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C ++P C C C+ +
Sbjct: 193 QAMMDLGATICAPKRPACALCPFRGNCRAL 222
>gi|19115057|ref|NP_594145.1| adenine DNA glycosylase Myh1 [Schizosaccharomyces pombe 972h-]
gi|1723233|sp|Q10159|MYH1_SCHPO RecName: Full=A/G-specific adenine DNA glycosylase
gi|1177349|emb|CAA93225.1| adenine DNA glycosylase Myh1 [Schizosaccharomyces pombe]
Length = 461
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 27/235 (11%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH---------------------FTLIVAVLLS 58
YT E+E + K L + + ++V+ ++
Sbjct: 13 YTQLEVERFRESLIQFYDKTKRILPWRKKECIPPSEDSPLEDWEQPVQRLYEVLVSEIML 72
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEK-KLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + E T + ++ +G Y + + H+
Sbjct: 73 QQTRVETVKRYYTKWMETLPTLKSCAEAEYNTQVMPLWSGMGFYTRCKRLHQACQHLAKL 132
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN- 176
E +PG+G A +LS+A+ PT VD ++ R+ +R
Sbjct: 133 HPSEIPRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGIVDGNVIRVLSRALAIHSDCSKG 192
Query: 177 ----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ P + + L+ G C + P+C C IS +CK ++
Sbjct: 193 KANALIWKLANELVDPVRPGDFNQALMELGAITCTPQSPRCSVCPISEICKAYQE 247
>gi|289435022|ref|YP_003464894.1| A/G-specific adenine glycosylase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171266|emb|CBH27808.1| A/G-specific adenine glycosylase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 362
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 6 WDEAKITAFQKALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + +I EF +P L + L G+
Sbjct: 66 FPTMESFVEADEADILKAWEGLGYYS-RVRNLQTAMKQVITEFSGTVPNDLATILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEINEDIMKASTRKIFEEVLYQLIDKTSP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCLLCPLQSFCEAHK 219
>gi|254503817|ref|ZP_05115968.1| base excision DNA repair protein, HhH-GPD family [Labrenzia
alexandrii DFL-11]
gi|222439888|gb|EEE46567.1| base excision DNA repair protein, HhH-GPD family [Labrenzia
alexandrii DFL-11]
Length = 331
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 79/190 (41%), Gaps = 4/190 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + + + ++ ++ Q+T V + T + + A E+ +
Sbjct: 3 PENRRLGEVPDPYRIWLSEVMLQQTTVAAVKSYFEVFTRTWPTVKDLAAADEEDVMKAWA 62
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ + + + P T L +LPGIG A I ++AF V
Sbjct: 63 GLGYYS-RARNLKKCADLVASAYGGEFPDTENALLKLPGIGPYTAAAIATIAFDRHAAVV 121
Query: 157 DTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ +R+ L P +++ + + P + ++ G +C +KP C
Sbjct: 122 DGNVERVLSRLKLIETPLPVAKPEIKAVMADLTPEARPGDFAQAVMDLGATICTPKKPAC 181
Query: 214 QSCIISNLCK 223
C C+
Sbjct: 182 VLCPWRETCE 191
>gi|3628759|gb|AAC36207.1| A/G-specific adenine DNA glycosylase [Schizosaccharomyces pombe]
Length = 461
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 27/235 (11%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH---------------------FTLIVAVLLS 58
YT E+E + K L + + ++V+ ++
Sbjct: 13 YTQLEVERFRESLIQFYDKTKRILPWRKKECIPPSEDSPLEDWEQPVQRLYEVLVSEIML 72
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEK-KLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + E T + ++ +G Y + + H+
Sbjct: 73 QQTRVETVKRYYTKWMETLPTLKSCAEAEYNTQVMPLWSGMGFYTRCKRLHQACQHLAKL 132
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN- 176
E +PG+G A +LS+A+ PT VD ++ R+ +R
Sbjct: 133 HPSEIPRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGIVDGNVIRVLSRALAIHSDCSKG 192
Query: 177 ----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ P + + L+ G C + P+C C IS +CK ++
Sbjct: 193 KANALIWKLANELVDPVRPGDFNQALMELGAITCTPQSPRCSVCPISEICKAYQE 247
>gi|116873123|ref|YP_849904.1| A/G-specific adenine glycosylase family protein [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116742001|emb|CAK21125.1| A/G-specific adenine glycosylase family protein [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 362
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 78/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F +P L + L G+
Sbjct: 66 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGVVPSDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I ++
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDQENP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCLLCPLQPFCEAHK 219
>gi|253995402|ref|YP_003047466.1| A/G-specific adenine glycosylase [Methylotenera mobilis JLW8]
gi|253982081|gb|ACT46939.1| A/G-specific adenine glycosylase [Methylotenera mobilis JLW8]
Length = 351
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 9/196 (4%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + N + + V+ ++ Q+ V T + + ++ +
Sbjct: 17 RHDLPWQNTTDPYAIWVSEIMLQQTQVAAVIGYYSKFMTSFPTIADLANATQDEVLQHWS 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++E + PQ + + L GIGR A I S AF +
Sbjct: 77 GLGYYS-RARNLHHAAQTIMDEHGGQFPQDFDTIQTLSGIGRSTAAAIASFAFHQVQTIL 135
Query: 157 DTHIFRISNRIGLAPGKTP-NKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G T KVE++L ++ +P L+ G +C KP
Sbjct: 136 DGNVKRVLARHFAISGWTSSPKVEKALWQLAESLLPQSDMVAYTQGLMDLGATICTRSKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
+C +C + + C +Q
Sbjct: 196 KCTACPLVSSCLAQQQ 211
>gi|47097401|ref|ZP_00234951.1| A/G-specific adenine glycosylase [Listeria monocytogenes str. 1/2a
F6854]
gi|224499588|ref|ZP_03667937.1| hypothetical protein LmonF1_07787 [Listeria monocytogenes Finland
1988]
gi|224503384|ref|ZP_03671691.1| hypothetical protein LmonFR_12880 [Listeria monocytogenes FSL
R2-561]
gi|254832394|ref|ZP_05237049.1| hypothetical protein Lmon1_13649 [Listeria monocytogenes 10403S]
gi|254900806|ref|ZP_05260730.1| hypothetical protein LmonJ_13359 [Listeria monocytogenes J0161]
gi|254913708|ref|ZP_05263720.1| A/G-specific adenine glycosylase [Listeria monocytogenes J2818]
gi|254938095|ref|ZP_05269792.1| A/G-specific adenine glycosylase [Listeria monocytogenes F6900]
gi|47014224|gb|EAL05207.1| A/G-specific adenine glycosylase [Listeria monocytogenes str. 1/2a
F6854]
gi|258610707|gb|EEW23315.1| A/G-specific adenine glycosylase [Listeria monocytogenes F6900]
gi|293591723|gb|EFG00058.1| A/G-specific adenine glycosylase [Listeria monocytogenes J2818]
Length = 362
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRVLPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 66 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I K+
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEIGEDIMKASTRKIFEEVLYQLIDKKNP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 219
>gi|315282086|ref|ZP_07870575.1| A/G-specific adenine glycosylase [Listeria marthii FSL S4-120]
gi|313614272|gb|EFR87927.1| A/G-specific adenine glycosylase [Listeria marthii FSL S4-120]
Length = 365
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F +P L + L G+
Sbjct: 69 FPTMEHFVKADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGVVPNDLTTILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I +H
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDKEHP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 188 SAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 222
>gi|323693743|ref|ZP_08107940.1| A/G-specific adenine glycosylase [Clostridium symbiosum WAL-14673]
gi|323502194|gb|EGB18059.1| A/G-specific adenine glycosylase [Clostridium symbiosum WAL-14673]
Length = 366
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKA 69
P L + L + + + + L + + + ++ ++ Q+ V
Sbjct: 12 ERPDTPLTEDERLRAVRGPLLHWYDNNRRILPWREEPEAYKVWISEIMLQQTRVEAVKPY 71
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
E + A E+ L +G Y ++ N+ + ++++E +P + +
Sbjct: 72 FARFMEALPDVISLAAADEETLLKLWEGLGYYS-RARNLKKAAQVIVDEHGGVMPDSYDK 130
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--- 186
L +LPGIG A I S+AFGIP VD ++ R+ +R+ G + ++
Sbjct: 131 LLKLPGIGSYTAGAISSIAFGIPEPAVDGNVLRVISRLLADRGDITKAGTKKRYELLIRD 190
Query: 187 --PPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
+ + + L+ G VC KP C C +++LC +K
Sbjct: 191 NMDRERAGDYNQALIELGAIVCIPAGKPLCGECPMNSLCLALK 233
>gi|240850101|ref|YP_002971494.1| A/G-specific adenine glycosylase MutY [Bartonella grahamii as4aup]
gi|240267224|gb|ACS50812.1| A/G-specific adenine glycosylase MutY [Bartonella grahamii as4aup]
Length = 352
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
EI + L + + + + ++ ++ Q+T V K
Sbjct: 3 EISSHLLAWYDQNHRHLPWRITPEKQKQGIRPDPYQVWLSEIMLQQTTVETVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + + + +G Y ++ N+ + L+ + + PQ+++ L L
Sbjct: 63 KLWPDLSSLAKASQDDIMKAWAGLGYYS-RARNLKKCAQQLVENYAGQFPQSVKELRTLA 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I S+AF P VD ++ R+ R+ ++++ +I
Sbjct: 122 GIGDYTAAAIASIAFNHPVAVVDGNVERVVARLFAITSILQKAKVEIKEKTQKITALNRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC RKP C +C + LCK K
Sbjct: 182 GDFAQAMMDLGATVCTPRKPSCYTCPLQCLCKAAK 216
>gi|254829213|ref|ZP_05233900.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
N3-165]
gi|284802081|ref|YP_003413946.1| hypothetical protein LM5578_1836 [Listeria monocytogenes 08-5578]
gi|284995223|ref|YP_003416991.1| hypothetical protein LM5923_1788 [Listeria monocytogenes 08-5923]
gi|258601624|gb|EEW14949.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
N3-165]
gi|284057643|gb|ADB68584.1| hypothetical protein LM5578_1836 [Listeria monocytogenes 08-5578]
gi|284060690|gb|ADB71629.1| hypothetical protein LM5923_1788 [Listeria monocytogenes 08-5923]
Length = 362
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 6 WDETKITAFQEALVSWYEANKRVLPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 66 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I K+
Sbjct: 125 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEIGEDIMKASTRKIFEEVLYQLIDKKNP 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 185 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 219
>gi|227824799|ref|ZP_03989631.1| A/G-specific adenine glycosylase [Acidaminococcus sp. D21]
gi|226905298|gb|EEH91216.1| A/G-specific adenine glycosylase [Acidaminococcus sp. D21]
Length = 361
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 11/210 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYV-----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E + K +L + + + + V+ ++ Q+ V T
Sbjct: 14 NEWVPALLHWFDETKRDLPWRANHPRDPYHVWVSEIMLQQTRTETVKDYYVRWMAAFPTV 73
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ E+++ + +G Y ++ N+ + ++ ++ P TLE + LPGIG
Sbjct: 74 SALAQASEEEVLKLWQGLGYYS-RARNLHKAAREIVLQYHGIFPDTLEAVRALPGIGDYT 132
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAH 195
A ILSMAFG VD ++ R+ R+ + + +IP + +
Sbjct: 133 AGAILSMAFGHAVPAVDGNLLRVMARLFGISDDILSLKGKRIIGRIAQTVIPQDRPGDFN 192
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G +C P+C SC + + C
Sbjct: 193 EALMDLGATICIPHVPRCGSCPLKDFCTAF 222
>gi|222151842|ref|YP_002561002.1| A/G-specific adenine glycosylase homolog [Macrococcus caseolyticus
JCSC5402]
gi|222120971|dbj|BAH18306.1| A/G-specific adenine glycosylase homolog [Macrococcus caseolyticus
JCSC5402]
Length = 344
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 81/216 (37%), Gaps = 13/216 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ + + K E+ + + + + ++ ++ Q+ V E
Sbjct: 1 MLNKQQFSQ---HLLDWFYKNKREMPWRETKDPYKIWLSEVMLQQTQVNTVKPYYLKFTE 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + ++ Y +G Y + N S + ++ +P E +L G
Sbjct: 58 RFPDIRTLASAEIDEVTKYWEGLGYYS-RVRNFHSAVKEVQESYNGVVPNNPEDFLKLKG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
+G ++S+AF VD +++R+ +R ++ E ++ +IP
Sbjct: 117 VGPYTQGAVMSIAFNHQIPAVDGNVYRVFSRLDNDDFDISSSSARRHFEDKVMDVIPKA- 175
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G VC + P C C + C+ +
Sbjct: 176 AGDFNEALMELGATVCTPKSPLCMFCPVQQHCESYE 211
>gi|323484889|ref|ZP_08090244.1| A/G-specific adenine glycosylase [Clostridium symbiosum WAL-14163]
gi|323401770|gb|EGA94113.1| A/G-specific adenine glycosylase [Clostridium symbiosum WAL-14163]
Length = 366
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKA 69
P L + L + + + + L + + + ++ ++ Q+ V
Sbjct: 12 ERPDTPLTEDERLRAVRGPLLHWYDNNRRILPWREEPEAYKVWISEIMLQQTRVEAVKPY 71
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
E + A E+ L +G Y ++ N+ + ++++E +P + +
Sbjct: 72 FARFMEALPDVISLAAADEETLLKLWEGLGYYS-RARNLKKAAQVIVDEHGGVMPDSYDK 130
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--- 186
L +LPGIG A I S+AFGIP VD ++ R+ +R+ G + ++
Sbjct: 131 LLKLPGIGSYTAGAISSIAFGIPEPAVDGNVLRVISRLLADRGDITKAGTKKRYELLIRD 190
Query: 187 --PPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
+ + + L+ G VC KP C C +++LC +K
Sbjct: 191 NMDRERAGDYNQALIELGAIVCIPAGKPLCGECPMNSLCLALK 233
>gi|218531841|ref|YP_002422657.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
chloromethanicum CM4]
gi|218524144|gb|ACK84729.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
chloromethanicum CM4]
Length = 238
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--------PSPKGELYYVNHFTLIVA 54
S ++ S + +P+ ++L+ I+ + S + P L F +V+
Sbjct: 6 SRSQNPSRRAAAPVAA---KRDLDAIYGILSKTYTTFDETDDPWMTNGLS-STPFKSLVS 61
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V LS + +V A L+E T +++ + + +L+ I+ + Y +K++N+ ++
Sbjct: 62 VCLSTMTITQHVVNAAVPLYEKVSTFEELRDLPDDELRRIIKPVAHYNRKTKNLKEMARQ 121
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+I ++ IP + L +L G+GRK +++++ F +I VDTH+ R+ NR+G+ +
Sbjct: 122 IIEDYGGNIPDNRDDLMKLQGVGRKCVDILMNFTFSQDSIAVDTHVLRVLNRLGVVDTTS 181
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P +H+ +AH WL+ HG +C AR P+C C ++ C
Sbjct: 182 AKQAADLINAQTPARHKRHAHEWLIQHGMKICVARTPKCADCPLTKHCDWY 232
>gi|260553881|ref|ZP_05826149.1| A/G specific adenine glycosylase [Acinetobacter sp. RUH2624]
gi|260405001|gb|EEW98503.1| A/G specific adenine glycosylase [Acinetobacter sp. RUH2624]
Length = 344
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 80/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQSHCQAYQQ 211
>gi|254477509|ref|ZP_05090895.1| A/G-specific adenine glycosylase [Ruegeria sp. R11]
gi|214031752|gb|EEB72587.1| A/G-specific adenine glycosylase [Ruegeria sp. R11]
Length = 354
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 16/208 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +L + + + + ++ ++ Q+T V
Sbjct: 13 DTLLEWYDQHARDLPWRISPADRAQGVWPDPYRIWLSEVMLQQTTVAAVKDYFHRFTTRW 72
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + + +G Y ++ N++ + ++ + P T +GL +LPGIG
Sbjct: 73 PTVADLAAAEDADVMGEWAGLGYYA-RARNLLKCARVVAQDHGGVFPDTYDGLIKLPGIG 131
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A I ++AF +D ++ R+ R+ P ++++ + P +
Sbjct: 132 PYTAAAISAIAFDRKETVLDGNVERVMARLYDIHTPLPAAKPELKEKAADLTPTGRPGDH 191
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 192 AQAVMDLGATICTPRNPACGICPWRTPC 219
>gi|119026339|ref|YP_910184.1| A/G-specific adenine glycosylase [Bifidobacterium adolescentis ATCC
15703]
gi|118765923|dbj|BAF40102.1| probable A/G-specific adenine glycosylase [Bifidobacterium
adolescentis ATCC 15703]
Length = 340
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 89/221 (40%), Gaps = 19/221 (8%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EI + W + +L + + ++V+ ++S Q+ V +
Sbjct: 39 DADEIATTLAQWWQTNARDLPWRFGRTTPWGVLVSEVMSQQTQMGRVVPYWTAWMDRWPD 98
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G R+ + +H++ ++ +++P T + L LPGIG
Sbjct: 99 AAALADAPKSDVITAWGRLGYPRRALR-LQECAHVIAYDYADELPHTYDELLALPGIGDY 157
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKHQYN-- 193
A+ +LS AFG VDT+I R+ +R + G R++P
Sbjct: 158 TASAVLSFAFGERIAVVDTNIRRVLSRAFVGVESLGGSASPAERALAKRLLPDDDSAKCR 217
Query: 194 --------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C++C I+ C ++
Sbjct: 218 RFDRPSVVWNQAVMELGATVCTAKSPLCEACPIAGKCAFLR 258
>gi|330819018|ref|XP_003291563.1| hypothetical protein DICPUDRAFT_156172 [Dictyostelium purpureum]
gi|325078265|gb|EGC31926.1| hypothetical protein DICPUDRAFT_156172 [Dictyostelium purpureum]
Length = 533
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATK 71
E++EI L + K +L + + + V+ ++ Q+ + V
Sbjct: 59 KTNEIKEIRKLMLEWYEKSKRDLPWRVHEGVDENVKAYRIWVSEIMLQQTRVITVIDYFN 118
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T + + +++ +G YR +++N+ S +I F IP+ ++ L
Sbjct: 119 RWIKKWPTIKDLANSTIEEVNQLWSGLGYYR-RAKNLYLGSKYVIENFKGIIPKEVKKLL 177
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRI----I 186
+PGIG A I S+AFG+ VD ++ R+ +R + +K + I +
Sbjct: 178 EIPGIGAYTAGAISSIAFGMQEPLVDGNVIRVFSRLRSIGANPKNSKTVKLFWSIGSDIV 237
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P++ + L+ G VC + PQC+ C + LC+ K+
Sbjct: 238 DPQNPGEFNQSLMELGATVCSVQSPQCKQCPVQTLCQAYKE 278
>gi|109003860|ref|XP_001101010.1| PREDICTED: a/G-specific adenine DNA glycosylase isoform 1 [Macaca
mulatta]
Length = 533
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSA 59
SP E+ + K +L + + + + V+ ++
Sbjct: 62 ASVSPYHLFRDIAEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQ 121
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 122 QTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELG 181
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ + +
Sbjct: 182 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLV 241
Query: 179 -EQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 SQRLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 294
>gi|260427440|ref|ZP_05781419.1| A/G-specific adenine glycosylase [Citreicella sp. SE45]
gi|260421932|gb|EEX15183.1| A/G-specific adenine glycosylase [Citreicella sp. SE45]
Length = 348
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 20/219 (9%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNV 66
+ E+ + +L + + + + ++ ++ Q+T V
Sbjct: 1 MREAARAED----LLEWYDRHARDLPWRIGPRARAAGVRPDPYRVWLSEIMLQQTTVPAV 56
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T + A + + +G Y ++ N++ + ++ +E P +
Sbjct: 57 KPYFEAFTARWPTVSDLAAAEDADVMAAWAGLGYYA-RARNLLKCARVVASEHGGVFPDS 115
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLL 183
E L +LPG+G A + ++A+ +P VD ++ R+ R+ P+ +
Sbjct: 116 QEALLQLPGVGPYTAGAVAAIAYDLPATVVDGNVERVMARLHDEHTPLPDAKPVLTGYAA 175
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + ++ G +C R P C C C
Sbjct: 176 ALTPDERPGCYAQAVMDLGATICTPRNPACGLCPWRPSC 214
>gi|311032717|ref|ZP_07710807.1| A/G-specific adenine glycosylase [Bacillus sp. m3-13]
Length = 368
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 9/204 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + L + + + + V+ ++ Q+ V E Q + E
Sbjct: 23 LITWFEREQRHLPWRKDQDPYKVWVSEIMLQQTKVDTVIPYFNSFIEQFPNIQSLAEAEE 82
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
K+ +G Y ++ N+ S + ++ +P T + ++ L G+G ILS+A
Sbjct: 83 DKVLKAWEGLGYYS-RARNLQSAVREVHESYEGIVPNTPKEISTLKGVGPYTTGAILSIA 141
Query: 149 FGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+G+P VD ++ R+ +RI +A KT E+ + +I ++ + L+ G
Sbjct: 142 YGVPEPAVDGNVMRVLSRILLIRDDIAKPKTRKIFEEVIRDLISKENPSFFNQGLMELGA 201
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VC P C C + C+ +
Sbjct: 202 MVCTPTSPSCLLCPVREHCRAFAE 225
>gi|307546609|ref|YP_003899088.1| A/G-specific adenine glycosylase [Halomonas elongata DSM 2581]
gi|307218633|emb|CBV43903.1| A/G-specific adenine glycosylase [Halomonas elongata DSM 2581]
Length = 373
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 79/211 (37%), Gaps = 9/211 (4%)
Query: 26 EEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + V+ ++ Q+ V + E +
Sbjct: 12 ETFQRRLLDWFDVHGRHDLPWQQDRTPYRVWVSEIMLQQTQVTTVIPYFERFMERFPDVE 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + ++ + +G Y + + ++ +LE + LPGIGR A
Sbjct: 72 ALAAADQDEVLHLWTGLGYYARGRNLHKAARVVMEEHDGAFPVHSLEAMAELPGIGRSTA 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHY 196
I++ + G + +D ++ R+ R+ G VE+ L + P + +
Sbjct: 132 GAIIAQSTGRRAVILDGNVKRVLTRLHAVEGWPGRPAVERRLWSLAERYTPDERVIDFTQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C+ +P+C C C ++
Sbjct: 192 AMMDLGATLCRRGRPECGRCPFETDCLAHER 222
>gi|16803729|ref|NP_465214.1| hypothetical protein lmo1689 [Listeria monocytogenes EGD-e]
gi|16411143|emb|CAC99767.1| lmo1689 [Listeria monocytogenes EGD-e]
Length = 365
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYEANKRVLPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 69 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I K+
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEIGEDIMKASTRKIFEEVLYQLIDKKNP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHK 222
>gi|197303286|ref|ZP_03168326.1| hypothetical protein RUMLAC_02008 [Ruminococcus lactaris ATCC
29176]
gi|197297570|gb|EDY32130.1| hypothetical protein RUMLAC_02008 [Ruminococcus lactaris ATCC
29176]
Length = 578
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
P+ + +++E L + + +L + N + + ++ ++ Q+ V +
Sbjct: 221 PVDVVLESPQMKETVPLIVEWYRKNRRDLPWRKNINAYRVWISEIMLQQTRVEAVKPYYE 280
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ + + E KL +G Y ++ N+ + ++ ++ K P+T E +
Sbjct: 281 RFLSELPDIETLANVEEDKLLKLWEGLGYYN-RARNLKLAAQQIMEQYGGKFPETYEKIR 339
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRII 186
L GIG A I S + + VD ++FR+ +RI + T KVE L +I
Sbjct: 340 ELKGIGNYTAGAIGSFVYDLQKPAVDGNVFRVVSRILEDADDILKASTRKKVESLLEEVI 399
Query: 187 PPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
P + + + L+ G VC P+C+ C +S+LC +
Sbjct: 400 PKESPGDFNQGLIELGAIVCLPGGEPKCEICPVSHLCLAHR 440
>gi|193215896|ref|YP_001997095.1| A/G-specific adenine glycosylase [Chloroherpeton thalassium ATCC
35110]
gi|193089373|gb|ACF14648.1| A/G-specific adenine glycosylase [Chloroherpeton thalassium ATCC
35110]
Length = 360
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 9/208 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + K +L + + + V+ ++ Q+ V + + +
Sbjct: 3 IEKDLLSWFLLNKRDLPWRKKRTPYKIWVSEIMLQQTQVATVIPYYERFLNAFPNLESLA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
KL +G Y + +N+ + ++ + + P L +L GIG A +I
Sbjct: 63 NADINKLMKIWEGLGYYT-RVKNMQEAAKTILQKHNGVFPSKKTELLQLKGIGDYTAAII 121
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLV 199
S+AF VD ++ R+ +R+ + ++ +H + ++
Sbjct: 122 ASIAFKEHCAAVDGNVLRVISRLNAINAPIQLNTTKQTIRIVAQELLSLEHPGEFNEAMM 181
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK + P C C IS C+ K+
Sbjct: 182 EVGALICKPKNPTCDICPISLHCQAYKK 209
>gi|331087294|ref|ZP_08336363.1| hypothetical protein HMPREF0987_02666 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408385|gb|EGG87856.1| hypothetical protein HMPREF0987_02666 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 594
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 10/230 (4%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQST 62
K D + + L PKEL+ + + K L + + + + V+ ++ Q+
Sbjct: 212 KKDEIKIRKEVPVLLEPKELQALADPLVEWFRKHKRALPWREDPSAYRVWVSEIMLQQTR 271
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + T +K+ E+KL +G Y + N+ + +++EF +
Sbjct: 272 VEAVRPFYARFMKELPTVEKLAVAEEEKLLKLWEGLGYYN-RVRNMQKAARQIMDEFSGE 330
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----K 177
P+ + + L GIG A I S A+GIP VD ++ R+ +RI + K
Sbjct: 331 FPRQYDQIRSLSGIGSYTAGAIASFAYGIPKPAVDGNVLRVLSRILASEDDIMKQSTKIK 390
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+E L +IP + + + L+ G +C +C+ C + +LC+ K
Sbjct: 391 IEYMLEGVIPKEAASDFNQGLIELGALICVPNGMAKCEECPVKHLCRARK 440
>gi|154488237|ref|ZP_02029354.1| hypothetical protein BIFADO_01811 [Bifidobacterium adolescentis
L2-32]
gi|154083388|gb|EDN82433.1| hypothetical protein BIFADO_01811 [Bifidobacterium adolescentis
L2-32]
Length = 334
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 88/221 (39%), Gaps = 19/221 (8%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EI + W + L + + ++V+ ++S Q+ V +
Sbjct: 33 DADEIATTLAQWWQTNARALPWRFGRTTPWGVLVSEVMSQQTQMGRVVPYWTAWMDRWPD 92
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G R+ + +H++ ++ +++P T + L LPGIG
Sbjct: 93 AAALADAPKSDVITAWGRLGYPRRALR-LQECAHVIAYDYADELPHTYDELLALPGIGDY 151
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKHQYN-- 193
A+ +LS AFG VDT+I R+ +R + G R++P
Sbjct: 152 TASAVLSFAFGERIAVVDTNIRRVLSRAFVGVESLGGSASPAERALAKRLLPDDDSAKCR 211
Query: 194 --------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C++C I+ C ++
Sbjct: 212 RFDRPSVVWNQAVMELGATVCTAKSPLCEACPIAGKCAFLR 252
>gi|89100161|ref|ZP_01173029.1| YfhQ [Bacillus sp. NRRL B-14911]
gi|89085127|gb|EAR64260.1| YfhQ [Bacillus sp. NRRL B-14911]
Length = 365
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 80/202 (39%), Gaps = 9/202 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + L + + + + V+ ++ Q+ V E T + + E
Sbjct: 21 LIGWFEQEQRTLPWRQDQDPYKVWVSEIMLQQTRVDTVIPYFNRFIEQFPTIEALAEAEE 80
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
K+ +G Y ++ N+ + + + ++P + ++ L G+G A ILS+A
Sbjct: 81 DKVLKAWEGLGYYS-RARNLQAAVREVHEHYGGRVPDNPKEISSLKGVGPYTAGAILSIA 139
Query: 149 FGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+GIP VD ++ R+ + +A T E+++ +I ++ + L+ G
Sbjct: 140 YGIPEPAVDGNVMRVLSRILSIWEDIAKPATRKIFEEAVRELISHENPSFFNQALMELGA 199
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
+C P C C + C
Sbjct: 200 LICTPTSPSCLLCPVREHCHAF 221
>gi|300812422|ref|ZP_07092852.1| endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496589|gb|EFK31681.1| endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 209
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 115/198 (58%), Gaps = 3/198 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AVLLSAQ+TD VNK T LF
Sbjct: 6 KLLSDEEARNVLKRIDAMFPEAKGELNWDNRFQLLCAVLLSAQTTDKMVNKVTPQLFADF 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ M+A +++++ I +G+Y K++++ ++ L+ E+ ++P E L +L G+G
Sbjct: 66 PTPEAMVAASQEEIEADISHLGLYHSKAKHLKEMAQTLVAEYGGQVPGKKEDLVKLAGVG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RI+ + + P K TP +VE+ L ++P + H+
Sbjct: 126 NKTANVVLAEGWGVPAIAVDTHVSRIAKKFKIVPEKATPLQVEKRLEELLPKDEWIHTHH 185
Query: 197 WLVLHGRYVC--KARKPQ 212
++ GRY +A+ P
Sbjct: 186 AMIFFGRYKMPARAKNPD 203
>gi|297278560|ref|XP_001101469.2| PREDICTED: a/G-specific adenine DNA glycosylase isoform 2 [Macaca
mulatta]
Length = 550
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 16/233 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSA 59
SP E+ + K +L + + + + V+ ++
Sbjct: 79 ASVSPYHLFRDIAEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQ 138
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T Q + + +++ +G Y + ++
Sbjct: 139 QTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELG 198
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV- 178
+ LPG+GR A I S+AFG T VD ++ R+ R+ + +
Sbjct: 199 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLV 258
Query: 179 -EQSL---LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 259 SQRLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 311
>gi|260557807|ref|ZP_05830020.1| A/G-specific adenine glycosylase [Acinetobacter baumannii ATCC
19606]
gi|260408598|gb|EEX01903.1| A/G-specific adenine glycosylase [Acinetobacter baumannii ATCC
19606]
Length = 344
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGY 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTHRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ KQ
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYKQ 211
>gi|114321842|ref|YP_743525.1| A/G-specific DNA-adenine glycosylase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228236|gb|ABI58035.1| A/G-specific DNA-adenine glycosylase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 361
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 10/220 (4%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVN 67
+ P + + + + +L + + + V+ ++ Q+ V
Sbjct: 2 ADRPGAPGTEEEAVNRTRAAILAWFDRHGRHDLPWQHPATPYRVWVSEVMLQQTQVATVV 61
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+P+ + ++++ +G Y ++ N+ + + +++ ++P L
Sbjct: 62 PYFHRFMRRFPSPRALADAPQEEVLALWAGLGYYA-RARNLHRAAQHIRDQYGGELPADL 120
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI- 185
+ L LPGIGR A I S+ G + +D ++ R+ R G V + L +
Sbjct: 121 DALEALPGIGRSTAGAIHSLGQGRRAVILDGNVKRVLARWHAVDGWPGRTAVARRLWALA 180
Query: 186 ---IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P + + ++ G VC R P+C C + C
Sbjct: 181 EHYTPAHRCADYNQAMMDLGATVCTRRTPRCHECPLQARC 220
>gi|313637521|gb|EFS02951.1| A/G-specific adenine glycosylase [Listeria seeligeri FSL S4-171]
Length = 377
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDEAKITAFQKALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + +I EF +P L + L G+
Sbjct: 69 FPTMESFVEADEADILKAWEGLGYYS-RVRNLQTAMKQVITEFSGTVPHDLATILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEINEDIMKASTRKIFEEVLYQLIDKTSP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCLLCPLQSFCEAHK 222
>gi|281485563|ref|NP_001039600.2| a/G-specific adenine DNA glycosylase [Bos taurus]
gi|194665837|ref|XP_001790428.1| PREDICTED: mutY homolog [Bos taurus]
Length = 526
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 16/240 (6%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLI 52
+K+ SP E+ + + K +L + + +
Sbjct: 46 QQKALLQASVSPYHLFRDVAEVTALQESLLDWYDRKKRDLPWRRLVEDEVDLDRRAYAVW 105
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
VA ++ Q+ V + T Q + + +++ +G Y +
Sbjct: 106 VAEVMLQQTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRWLQEGAR 165
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--- 169
++ + LPG+GR A I S+AFG VD ++ R+ R+
Sbjct: 166 KVVEELGGHMPRTAETLQQFLPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLCRVRAIGA 225
Query: 170 --APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +++ P + + + G VC ++P C C + NLC+ ++
Sbjct: 226 DSSSTLVSQHLWSLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCRARQR 285
>gi|167748297|ref|ZP_02420424.1| hypothetical protein ANACAC_03041 [Anaerostipes caccae DSM 14662]
gi|167652289|gb|EDR96418.1| hypothetical protein ANACAC_03041 [Anaerostipes caccae DSM 14662]
Length = 350
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 10/211 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+EI + L + N + + V+ ++ Q+ V E +
Sbjct: 5 KEIGEALLFWYDHNARILPWRADKNPYRIWVSEIMLQQTRVEAVKPYFDRFMEELPEVKD 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + E+KL +G Y ++ N+ + + ++ E+D K+P + L L GIG A
Sbjct: 65 LAEVDEEKLMKLWEGLGYYN-RARNLKAAAQTIVKEYDGKLPDDYDQLLSLKGIGMYTAG 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S+A+ I VD ++ R+ R + KT ++ ++ I+P + + +
Sbjct: 124 AIASIAYDIRVPAVDGNVLRVMARLLGDDSDILKEKTKKEMAARVMEIMPDQRAGDFNQA 183
Query: 198 LVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
L+ G VC P+C C +C ++
Sbjct: 184 LIELGAIVCVPNGEPKCSECPWDTVCTAYRE 214
>gi|300813557|ref|ZP_07093888.1| endonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512305|gb|EFK39474.1| endonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 230
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 1/202 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E I +P + EL + N++ L+ AV+LSAQ+TD +VNK + LFE
Sbjct: 5 ILNSEEALAILKALIKLYPQNQPELEFKNNYELLCAVVLSAQTTDKSVNKISPILFERYP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ M ++Q I++IG+ + KS+ + LS L+ F+ ++P T + L L G+GR
Sbjct: 65 RVEDMADADVNEIQEIIKSIGLSKNKSKYLKELSIELLENFNGQVPSTRKELMSLSGVGR 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ AF IP VDTH+ RI ++ +VE+ +++ IP K+ AH+
Sbjct: 125 KTANVLLANAFDIPAFAVDTHVNRICKKLKFVKEDLNVLQVEEEMMKKIPDKYWKQAHHS 184
Query: 198 LVLHGRYVCKARKPQCQSCIIS 219
++L GR+ C A+ C++
Sbjct: 185 ILLFGRHQCVAKNHDHSICLLR 206
>gi|315660118|ref|ZP_07912975.1| A/G-specific adenine glycosylase [Staphylococcus lugdunensis
M23590]
gi|315494799|gb|EFU83137.1| A/G-specific adenine glycosylase [Staphylococcus lugdunensis
M23590]
Length = 242
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 8/211 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + EL + + + + ++ ++ Q+ V + T
Sbjct: 17 RERTFKRHLEDWFNKNQRELPWRETADPYYIWLSEVMLQQTQVKTVIDYYHRFIQRFPTI 76
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+++ E ++ Y +G Y ++ N S + + +P E +L G+G
Sbjct: 77 KELSDAHEDEVLKYWEGLGYYS-RARNFHSAIKEVHQVYRGIVPSQPEHFEKLKGVGPYT 135
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHY 196
++S+AF P VD ++FR+ +RI + ++ + P +H +
Sbjct: 136 KAAVMSIAFNHPLPTVDGNVFRVWSRINNDYSDIKLQSTRKAYENQLEPYVQEHAGTFNQ 195
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C + P C C I + C+ +Q
Sbjct: 196 AMMELGALICTPKNPLCLFCPIQSHCEAFEQ 226
>gi|254262213|emb|CAZ90540.1| A/G-specific adenine glycosylase mutY [Enterobacter helveticus]
Length = 384
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 84/219 (38%), Gaps = 7/219 (3%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
P + P++ + K+ + + ++ ++ Q+ V +
Sbjct: 30 PHALMMQPQQFSRQVLDWYDKYGRKTLPWQQEKTPYKVWLSEVMLQQTQVTTVIPYFERF 89
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
T + ++ + +G Y ++ N+ + + + P T + ++ L
Sbjct: 90 MARFPTVSDLADAPLDEVLHLWTGLGYYA-RARNLHKAAQQVATLHGGQFPDTFDAVSAL 148
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPP 188
PG+GR A +LS++ G +D ++ R+ R G +VE+ L I P
Sbjct: 149 PGVGRSTAGAVLSLSLGQRFPILDGNVKRVLARCYAVEGWPGRKEVEKRLWEISDAVTPA 208
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ G VC KP+C+ C ++N C Q
Sbjct: 209 QGVERFNQAMMDLGALVCTRSKPKCEICPLNNGCVAYAQ 247
>gi|87120349|ref|ZP_01076244.1| A/G-specific adenine glycosylase [Marinomonas sp. MED121]
gi|86164452|gb|EAQ65722.1| A/G-specific adenine glycosylase [Marinomonas sp. MED121]
Length = 352
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 12/209 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I F + +L + + + ++ ++ Q+ V V +
Sbjct: 8 ADRILTWFDQH---GRKDLPWQMDKTPYRVWISEIMLQQTQVVTVIPYYQKFMTSFPDVY 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ E ++ + +G Y ++ N+ + +L NE D P +LEG+ L GIGR A
Sbjct: 65 RLADAPEDEVLAHWSGLGYYA-RARNLHKAAKVLANELDGTFPASLEGVCELSGIGRSTA 123
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHY 196
ILS++ T +D ++ R+ R K E + + +P + +
Sbjct: 124 AAILSISRNEQTAILDGNVKRVLGRFHAIDTWPGEKKTENVMWELAESYMPAERCGDYTQ 183
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C KPQC C I + C+ +
Sbjct: 184 AMMDLGATLCTRSKPQCLFCPIQDDCQAL 212
>gi|283852221|ref|ZP_06369494.1| A/G-specific adenine glycosylase [Desulfovibrio sp. FW1012B]
gi|283572447|gb|EFC20434.1| A/G-specific adenine glycosylase [Desulfovibrio sp. FW1012B]
Length = 366
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ + L + S L + + + + V+ +++ Q+ V
Sbjct: 2 RDVADFAPLLLHWFSSHARALPWRRDYDPYAVWVSEIMAQQTQMDRVVDYFNRFMARFPD 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A E + +G Y ++ N+++ + I+ E + P + + LPGIG
Sbjct: 62 IGALAAAPEDAVLKAWEGLGYYS-RARNLLAAARIVQAEHGGRFPADFDAIRALPGIGDY 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNA 194
A + S+AFG T+ VD ++ R+ R+ ++ + ++PP +
Sbjct: 121 TAGAVASIAFGADTVAVDANVLRVLARVCDIDAPVKEPAGKARVLAVARSLLPPGRARDY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ G VC+ + P CQ+C ++++C+
Sbjct: 181 NQALMELGALVCRPKNPDCQACPVADVCQA 210
>gi|298207121|ref|YP_003715300.1| putative A/G-specific adenine glycosylase [Croceibacter atlanticus
HTCC2559]
gi|83849755|gb|EAP87623.1| putative A/G-specific adenine glycosylase [Croceibacter atlanticus
HTCC2559]
Length = 351
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 85/205 (41%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K +L + + + + ++ ++ Q+ E T +
Sbjct: 9 KILINWYLKYKRDLPWRHTTDPYFIWLSEIMLQQTQVAQGLPYYLKFTETYPTVFHLAKA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++++ + +G Y ++ N+ + + NE D K P+ +GL RL G+G A+ I S
Sbjct: 69 SQEEVLKNWQGLGYYS-RARNLHETAKYVANERDGKFPEDYKGLLRLKGVGDYTASAIAS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ + P VD +++R+ +R + K + + ++ + ++
Sbjct: 128 ICYNEPVAVVDGNVYRVLSRYFGIETPINSTKGIKEFKAMAELLLDENQPALFNQAIMEF 187
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G CK + P C +C S+ CK ++
Sbjct: 188 GARHCKPKNPFCDTCPFSDSCKALQ 212
>gi|313632917|gb|EFR99857.1| A/G-specific adenine glycosylase [Listeria seeligeri FSL N1-067]
Length = 365
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDEAKITAFQKALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + +I EF +P L + L G+
Sbjct: 69 FPTMESFVEADEADILKAWEGLGYYS-RVRNLQTAMKQVITEFSGTVPHDLATILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEINEDIMKASTRKIFEEVLYQLIDKTSP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCLLCPLQSFCEAHK 222
>gi|154490935|ref|ZP_02030876.1| hypothetical protein PARMER_00852 [Parabacteroides merdae ATCC
43184]
gi|154088683|gb|EDN87727.1| hypothetical protein PARMER_00852 [Parabacteroides merdae ATCC
43184]
Length = 409
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 85/221 (38%), Gaps = 9/221 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKA 69
+ + + E L + K EL + + + + ++ ++ Q+
Sbjct: 43 EAKKNRMSQIENELETSRLLRDWYRIHKRELPWRESSDPYIIWISEIILQQTRVAQGMDY 102
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
E + + E ++ Y + +G Y ++ N+ + + ++ F P+ E
Sbjct: 103 FLRFTERFPDVASLASAEEDEVLKYWQGLGYYS-RARNLHAAAKDIMERFGGIFPERYED 161
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRI--- 185
+ L GIG A I+S + P VD ++FR+ +R+ + +++ +
Sbjct: 162 VISLKGIGEYTAAAIVSFVWNQPYPVVDGNVFRVLSRLFAVDTPIDTPRGKKAFTELAGL 221
Query: 186 -IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P++ + ++ G C + P C++C + C
Sbjct: 222 VMDPRYAGQHNQAIMELGALQCVPQNPDCEACPLKGHCAAY 262
>gi|254000312|ref|YP_003052375.1| A/G-specific adenine glycosylase [Methylovorus sp. SIP3-4]
gi|253986991|gb|ACT51848.1| A/G-specific adenine glycosylase [Methylovorus sp. SIP3-4]
Length = 373
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 7/201 (3%)
Query: 33 SLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ + + + V+ ++ Q+ V + + T + + +
Sbjct: 34 QKRYGRHDLPWQQTRDPYAVWVSEIMLQQTQVAAVIGYYQRFMQSFPTIASLAMATQDDV 93
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y ++ N+ + ++ PQTLE + LPGIGR A+ I S AF
Sbjct: 94 MQHWSGLGYYS-RARNLHKAAQQVMEVHGGVFPQTLEAIQALPGIGRSTASAIASFAFEA 152
Query: 152 PTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVC 206
P +D ++ R+ R G +VEQ + R+ P + L+ G +C
Sbjct: 153 PHPILDGNVKRVFARHFAIEGWPGLPRVEQQMWALAERLQPAQEHGPYAQALMDMGATLC 212
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+P+C +C + C ++
Sbjct: 213 TRSRPRCDACPLQTTCLAYRE 233
>gi|116514022|ref|YP_812928.1| EndoIII-related endonuclease [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093337|gb|ABJ58490.1| Predicted EndoIII-related endonuclease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325125711|gb|ADY85041.1| Endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 209
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AVLLSAQ+TD VNK T LF
Sbjct: 6 KLLSDEEARNVLKRIDAMFPEAKGELNWDNRFQLLCAVLLSAQTTDKMVNKVTPQLFADF 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ M A +++++ I +G+Y K++++ ++ L+ E+ ++P E L +L G+G
Sbjct: 66 PTPEAMAAASQEEIEADISHLGLYHSKAKHLKEMAQTLVAEYGGQVPGKKEDLVKLAGVG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RI+ + + P K TP +VE+ L ++P + H+
Sbjct: 126 NKTANVVLAEGWGVPAIAVDTHVSRIAKKFKIVPEKATPLQVEKRLEELLPKDEWIHTHH 185
Query: 197 WLVLHGRYVC--KARKPQ 212
++ GRY +A+ P
Sbjct: 186 AMIFFGRYKMPARAKNPD 203
>gi|294648652|ref|ZP_06726114.1| A/G-specific adenine glycosylase [Acinetobacter haemolyticus ATCC
19194]
gi|292825442|gb|EFF84183.1| A/G-specific adenine glycosylase [Acinetobacter haemolyticus ATCC
19194]
Length = 344
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T Q +
Sbjct: 8 DALLTWYDQHGRHDLPWQIADDPYKVWVSEIMLQQTQVKTVLQYFDRFIERFPTVQDLGQ 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ASWDDVAPYWAGLGYYARARNLHKAAGIVSQQGKF---PETLEQWIELPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + + Q + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHERALWQIAEDLCPQQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC +KP C C + C+ +Q
Sbjct: 185 LGATVCTPKKPLCLYCPMQQHCQAYQQ 211
>gi|94263146|ref|ZP_01286964.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456517|gb|EAT06631.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 19 LYTPKEL--EEIFYLFSL---KWPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ K + E+ + P +L + + ++VA +LS+++ D A
Sbjct: 1 MKKIKSINMEQAVARLEEVVPHYRVPVVDLIAVQSKDPYRILVATILSSRTRDETTAGAA 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ LF A + +GEK+L I +G YR K+ + L +L +F +IP T+E L
Sbjct: 61 ERLFVRAPDLASLARLGEKELARLIHPVGFYRAKAGYLARLPGVLAAKFGGQIPATVEEL 120
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+GRK AN+++++AF P I VDTH+ RI N G TP E++L +P H
Sbjct: 121 IQLPGVGRKTANLVVAVAFEQPAICVDTHVHRIMNIWGYVRTATPEATEKALRAKLPLVH 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +C+ C C +++LC R
Sbjct: 181 WRRINSLLVAFGQEICRPVGAHCDRCPLADLCPR 214
>gi|332878737|ref|ZP_08446454.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683374|gb|EGJ56254.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 353
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 9/200 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + K +L + + + + ++ ++ Q+ V + T +
Sbjct: 16 KLLSWYATAKRDLPWRGTTDPYKVWLSEIILQQTRVVQGLPYYERFITHFPTVSDLAKAS 75
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+++ + +G Y +++N+ + + P++ + L +L GIG A+ I S
Sbjct: 76 EEEVLKLWQGLGYYS-RAKNLHHTAQHIATVLGGVFPKSYQELVKLKGIGDYTASAIASF 134
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ P VD +++R+ +R+ + + ++ + ++ G
Sbjct: 135 CYNEPCAVVDGNVYRVLSRLFGVQTPINTPAAAKEFKALANELLDKPRAGEYNQAIMEFG 194
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC + P C +C++ + C
Sbjct: 195 AIVCTPQSPDCANCVLRDNC 214
>gi|221640956|ref|YP_002527218.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides
KD131]
gi|221161737|gb|ACM02717.1| A/G-specific DNA-adenine glycosylase [Rhodobacter sphaeroides
KD131]
Length = 336
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P+ + + + + + ++ ++ Q+T V + + + + A + +
Sbjct: 3 PAERRAGHRPDPYRVWLSEIMLQQTTVAAVRDYFRRFTDRWPDVEALAAAPDADVMAEWA 62
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N++ + ++ + P+T +GL LPG+G A + S+AF P V
Sbjct: 63 GLGYYA-RARNLLKGARAVVALHGGRFPETRDGLLSLPGVGPYTAAAMASIAFDEPATVV 121
Query: 157 DTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ +R+ P ++ + + P + ++ G +C RKP C
Sbjct: 122 DGNVERVVSRLFAVETPLPAAKPELTRLAATLTPQVRPGDHAQAMMDLGATICTPRKPVC 181
Query: 214 QSCIISNLCK 223
C + C+
Sbjct: 182 SLCPLRPDCE 191
>gi|92112655|ref|YP_572583.1| A/G-specific DNA-adenine glycosylase [Chromohalobacter salexigens
DSM 3043]
gi|91795745|gb|ABE57884.1| A/G-specific DNA-adenine glycosylase [Chromohalobacter salexigens
DSM 3043]
Length = 353
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 9/207 (4%)
Query: 25 LEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E + + L + + + V+ ++ Q+ V + +
Sbjct: 8 AEAFRQRLFAWFDEHGRKTLPWQFDKTPYRVWVSEIMLQQTQVATVIPYYQRFMDRFPDV 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++ + +G Y + + ++ ++E L+ LPGIGR
Sbjct: 68 FALAEAPQDEVLHLWTGLGYYARARNLHKAARVVVEEHGGEFPVDSVEALSTLPGIGRST 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAH 195
A I+S++ G +D ++ R+ R+ G VE+ L + P + +
Sbjct: 128 AGAIISISTGRRAPILDGNVKRVLTRLHGVEGWPGRPAVERELWVLAERYTPEERLPDYT 187
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C KP C C +++C
Sbjct: 188 QAMMDVGATLCTRGKPACLLCPFNDVC 214
>gi|319405303|emb|CBI78917.1| A/G-specific adenine glycosylase MutY [Bartonella sp. AR 15-3]
Length = 352
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 16/215 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+I L + L + + + + ++ ++ Q+T V K
Sbjct: 3 KISSLLLSWYDQNYRHLPWRIPPTKQIKGIYPDPYRIWLSEVMLQQTTVETVKPYFKKFL 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++ + + + +G Y ++ N+ + + L+ K PQ+++ L LP
Sbjct: 63 KLWPDLFSLSQASQDDIMKAWAGLGYYS-RARNLKNCAIQLVKNHRGKFPQSVKILRTLP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQ 191
GIG A I ++AF P VD ++ R+ R+ P ++++ I K
Sbjct: 122 GIGDYTAAAIAAIAFDHPVAVVDGNVERVITRLFAITSTLPKAKSEIKEKTFEITDVKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C RKP C C + NLC +K
Sbjct: 182 GDFAQAMMDLGATICTPRKPSCLLCPLQNLCTAMK 216
>gi|313202269|ref|YP_004040927.1| a/g-specific adenine glycosylase [Methylovorus sp. MP688]
gi|312441585|gb|ADQ85691.1| A/G-specific adenine glycosylase [Methylovorus sp. MP688]
Length = 373
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 7/201 (3%)
Query: 33 SLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ + + + V+ ++ Q+ V + + T + + +
Sbjct: 34 QKRYGRHDLPWQQTRDPYAVWVSEIMLQQTQVAAVIGYYQRFMQRFPTIASLAMATQDDV 93
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y ++ N+ + ++ PQTLE + LPGIGR A+ I S AF
Sbjct: 94 MQHWSGLGYYS-RARNLHKAAQQVMEVHGGVFPQTLEAIQALPGIGRSTASAIASFAFEA 152
Query: 152 PTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVC 206
P +D ++ R+ R G +VEQ + R+ P + L+ G +C
Sbjct: 153 PHPILDGNVKRVFARHFAIEGWPGLPRVEQQMWALAERLQPAQEHGPYAQALMDMGATLC 212
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+P+C +C + C ++
Sbjct: 213 TRSRPRCDACPLQTTCLAYRE 233
>gi|114707682|ref|ZP_01440577.1| A/G-specific adenine glycosylase protein [Fulvimarina pelagi
HTCC2506]
gi|114536926|gb|EAU40055.1| A/G-specific adenine glycosylase protein [Fulvimarina pelagi
HTCC2506]
Length = 353
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 4/191 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + E + + + + ++ ++ Q+T V T + ++
Sbjct: 29 PKARREGHRPDAYKIWLSEIMLQQTTVAAVKPFFARFVNRWPTVGDLANAEASEIMAEWA 88
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P+T L LPGIG + I S+AF V
Sbjct: 89 GLGYYS-RARNLHVCAKEVVENHGGAFPRTAAALKALPGIGDYTSAAIASIAFDEAAPVV 147
Query: 157 DTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D +I R+ R+ P V++ + + P + ++ G +C R P C
Sbjct: 148 DGNIERVITRLYRISAPLPGAKPHVKEKVTGLTPKDRPGDFAQAMMDLGATICVPRSPSC 207
Query: 214 QSCIISNLCKR 224
C + C+
Sbjct: 208 LLCPAAEQCEA 218
>gi|217964162|ref|YP_002349840.1| A/G-specific adenine glycosylase [Listeria monocytogenes HCC23]
gi|217333432|gb|ACK39226.1| A/G-specific adenine glycosylase [Listeria monocytogenes HCC23]
gi|307571271|emb|CAR84450.1| A/G-specific adenine glycosylase [Listeria monocytogenes L99]
Length = 362
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 77/211 (36%), Gaps = 9/211 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + K L + + + V+ ++ Q+ V T
Sbjct: 10 KITAFQEALVSWYEANKRVLPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQFPTM 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E + +G Y + N+ + ++ +F ++P L + L G+G
Sbjct: 70 EDFVQADEADILKAWEGLGYYS-RVRNLQTAMKQVMADFSGEVPTDLTTILSLKGVGPYT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAH 195
A ILS+A+ VD ++ R+ R+ E+ L ++I ++ +
Sbjct: 129 AGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDKENPAAFN 188
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G VC KP C C + C K
Sbjct: 189 QGLMEIGALVCTPTKPMCMLCPLQPFCDAHK 219
>gi|223044015|ref|ZP_03614055.1| A/G-specific adenine glycosylase [Staphylococcus capitis SK14]
gi|222442558|gb|EEE48663.1| A/G-specific adenine glycosylase [Staphylococcus capitis SK14]
Length = 347
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E + + E+ + N + + ++ ++ Q+ V T
Sbjct: 5 ESFKKRIVEWFNKNQREMPWRETTNPYYIWLSEVMLQQTQVNTVIDYYHRFVNRFPTIAA 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y +G Y ++ N + + +++ ++P + +L G+G
Sbjct: 65 LSEAHEDEVLKYWEGLGYYS-RARNFHTAVKEVESQYGGEVPSDPDLFKKLKGVGPYTQA 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWL 198
++S+AF P VD ++FR+ +R+ T + ++ + P + + +
Sbjct: 124 AVMSIAFNQPLATVDGNVFRVWSRLNNDYRDTKLQSTRKAFEEELNPYVQEDSGTFNQAM 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G +C + P C C + + C+ +
Sbjct: 184 MELGALICTPKSPLCLFCPVQDNCEAFHE 212
>gi|312863742|ref|ZP_07723980.1| A/G-specific adenine glycosylase [Streptococcus vestibularis F0396]
gi|311101278|gb|EFQ59483.1| A/G-specific adenine glycosylase [Streptococcus vestibularis F0396]
Length = 383
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWDAEKIVSFRRTLLDWYDREKRDLPWRRTKNPYYIWVSEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+KL +G Y + N+ + ++ +F + P T + + +L
Sbjct: 70 DWFPTVKDLAEAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGQFPDTYDNIAKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFELPEPAVDGNVMRVMARLFEVNYDIGNPKNRKIFQAIMDILIDPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|104774006|ref|YP_618986.1| endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|103423087|emb|CAI97808.1| Endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
Length = 209
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AVLLSAQ+TD VNK T LF
Sbjct: 6 KLLSDEEARNVLKRIDAMFPEAKGELNWDNRFQLLCAVLLSAQTTDKMVNKVTPQLFADF 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ M A +++++ I +G+Y K++++ ++ L+ E+ ++P E L +L G+G
Sbjct: 66 PTPEAMAAASQEEIEADISHLGLYHSKAKHLKEMAQTLVAEYGGQVPGKKENLVKLAGVG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RI+ + + P K TP +VE+ L ++P + H+
Sbjct: 126 NKTANVVLAEGWGVPAIAVDTHVSRIAKKFKIVPEKATPLQVEKRLEELLPKDEWIHTHH 185
Query: 197 WLVLHGRYVC--KARKPQ 212
++ GRY +A+ P
Sbjct: 186 AMIFFGRYKMPARAKNPD 203
>gi|251772332|gb|EES52900.1| putative A/G-specific DNA glycosylase [Leptospirillum
ferrodiazotrophum]
Length = 359
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 12/201 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + + + + V+ ++ Q+T V K +
Sbjct: 4 LLAWYDAGHRDLPWRQGCDPYRIWVSEIMLQQTTVATVLKFYDRFLSRFPDVGALAGADL 63
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y++ + + P++L G LPGIGR A I S++
Sbjct: 64 TEVLRFWSGLGYYQRARNLHRAARIVAERGSF---PESLAGWAELPGIGRSTAGAIFSIS 120
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP-----PKHQYNAHYWLVLHGR 203
+ +D ++ R+ A GK K E L + + + L+ G
Sbjct: 121 RNLWAPILDANVRRVV-ERFFAVGKEEKKREARLWELSDSFGRENPRPGDTNQALMELGA 179
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VC P+C C + + C+
Sbjct: 180 TVCLPASPRCSICPLRSSCRS 200
>gi|157960936|ref|YP_001500970.1| A/G-specific adenine glycosylase [Shewanella pealeana ATCC 700345]
gi|157845936|gb|ABV86435.1| A/G-specific adenine glycosylase [Shewanella pealeana ATCC 700345]
Length = 354
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + +L + + + ++ ++ Q+ V + + +
Sbjct: 10 RIITWYDNFGRKQLPWQIAKTPYKVWISEIMLQQTQVATVIPYFEKFIARFPDIDTLASA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ +Y +G Y ++ N+ + + ++F + P + + LPGIGR A +LS
Sbjct: 70 EQDEVLHYWTGLGYYA-RARNLHKAAQTMQSQFSGEFPTDFDDVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLH 201
++ G+ +D ++ R+ R G G K VEQ L + P K + ++
Sbjct: 129 LSLGLNFPILDGNVKRVLARHGAIEGWPGKKPVEQQLWLLTENLTPAKDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G VC KP C C ++ CK
Sbjct: 189 GATVCTRSKPNCAQCPVAIDCKA 211
>gi|299768294|ref|YP_003730320.1| A/G specific adenine glycosylase [Acinetobacter sp. DR1]
gi|298698382|gb|ADI88947.1| A/G specific adenine glycosylase [Acinetobacter sp. DR1]
Length = 344
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 77/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDEHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEMLGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIG A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVTQQGKF---PKTLEEWIALPGIGPSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTHRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|262373856|ref|ZP_06067134.1| A/G-specific adenine glycosylase [Acinetobacter junii SH205]
gi|262311609|gb|EEY92695.1| A/G-specific adenine glycosylase [Acinetobacter junii SH205]
Length = 345
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + + T + + +
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFIQRFPTVNDLGQASWDDVAPFWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + K P TLE LPGIGR A ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAAI---VHQQGKFPATLEQWIELPGIGRSTAGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L+ + + + + P + ++ ++ G VC +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPQHERALWKIAEDLCPEQRNHDYTQAIMDLGATVCTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + C+ +Q
Sbjct: 196 LCLYCPMQQHCQAYQQ 211
>gi|258648400|ref|ZP_05735869.1| A/G-specific adenine glycosylase [Prevotella tannerae ATCC 51259]
gi|260851570|gb|EEX71439.1| A/G-specific adenine glycosylase [Prevotella tannerae ATCC 51259]
Length = 356
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 11/211 (5%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E + + K EL + + + + ++ ++ Q+ V + +
Sbjct: 11 QEAHYFAEQIEEWYLNNKRELPWRDIKDPYRIWISEIILQQTRVVQGYDYYLRFIDRFPS 70
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + E ++ + +G Y + + I+ P + + L G+G
Sbjct: 71 VEDLAKADEDEVLKLWQGLGYYSRARNLYSAAKSIVERGEF---PTNYKDIRMLKGVGDY 127
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNA 194
A I S A+ +P VD +++R+ R + + ++ K+
Sbjct: 128 TAAAIASFAYNLPYAVVDGNVYRVLARYWGITTPIDTTEGKKLFAALAQNLLDKKNPAQY 187
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ G C P C C + C
Sbjct: 188 NQALMDFGALQCVPNNPNCNECPLQANCIAF 218
>gi|218261479|ref|ZP_03476290.1| hypothetical protein PRABACTJOHN_01956 [Parabacteroides johnsonii
DSM 18315]
gi|218223997|gb|EEC96647.1| hypothetical protein PRABACTJOHN_01956 [Parabacteroides johnsonii
DSM 18315]
Length = 359
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + E L + K EL + + + + ++ ++ Q+ V E
Sbjct: 1 MSQIENELETSRLLRDWYRIHKRELPWRESSDPYIIWISEIILQQTRVVQGMDYFLRFTE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E ++ Y + +G Y ++ N+ + + ++ FD P E + L G
Sbjct: 61 RFPDVASLASAEEDEVLKYWQGLGYYS-RARNLHAAAKDIMERFDGIFPGRYEDVISLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRI----IPPKH 190
IG A I+S + P VD ++FR+ +R+ + +++ + + P++
Sbjct: 120 IGEYTAAAIVSFVWNQPYPVVDGNVFRVLSRLFAVDTPIDTPRGKKAFTELAGLVMDPRY 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G C + P C++C + C
Sbjct: 180 AGQHNQAIMELGALQCVPQNPDCEACPLKERCAAY 214
>gi|163853031|ref|YP_001641074.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
extorquens PA1]
gi|163664636|gb|ABY32003.1| DNA-(apurinic or apyrimidinic site) lyase [Methylobacterium
extorquens PA1]
Length = 238
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 12/231 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--------PSPKGELYYVNHFTLIVA 54
S ++ S + +P+ ++L+ I+ + S + P L F +V+
Sbjct: 6 SRSQNTSRRAAAPVAA---KRDLDAIYGILSKTYTTFDETDDPWMTNGLS-STPFKSLVS 61
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V LS + V A L+E T +++ + + +L+ I+ + Y +K++N+ ++
Sbjct: 62 VCLSTMTITKRVVNAAVPLYEKVSTFEELRDLPDDELRRIIKPVAHYNRKTKNLKEMARQ 121
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+I ++D IP + L +L G+GRK +++++ F +I VD H+ R+ NR+G+ +
Sbjct: 122 IIEDYDGNIPDNRDDLIKLQGVGRKCVDILMNFTFSQDSIAVDRHVLRVMNRLGVVETTS 181
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P +H+ +AH WL+ HG +C AR P+C C ++ C
Sbjct: 182 AKQAADLINAQTPARHKRHAHEWLIQHGMKICVARTPKCADCPLTKHCDWY 232
>gi|323128001|gb|ADX25298.1| A/G-specific adenine glycosylase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 388
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ + V +
Sbjct: 11 MWDEETIISFRRTLLNWYDQEKRDLPWRRTKNPYHIWVSEIMLQQTQVITVIPYYERFLN 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K+ E++L +G Y + N+ + ++ EF P + E +++L G
Sbjct: 71 WFPSIDKLANADEERLLKAWEGLGYYS-RVRNMQKAAQQVMTEFGGVFPSSYEDISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + R+I P
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQALMERLIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|225571627|ref|ZP_03780623.1| hypothetical protein CLOHYLEM_07725 [Clostridium hylemonae DSM
15053]
gi|225159704|gb|EEG72323.1| hypothetical protein CLOHYLEM_07725 [Clostridium hylemonae DSM
15053]
Length = 605
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L E+ + + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 249 LYELARPLISWYRENRRDLPWREQPDAYHVWVSEIMLQQTRVEAVKPYYERFLKALPTVR 308
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ GE L +G Y + N+ + ++ + + P T E + L GIG A
Sbjct: 309 HLAEAGEDTLLKLWEGLGYYN-RVRNMQKAAQQIMVDHNGTFPDTYEQILSLKGIGSYTA 367
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHY 196
+ + AFG+P VD ++ R+ +RI + + +E+ L +IP +
Sbjct: 368 GAVSAFAFGLPKPAVDGNVLRVVSRILASEEDIMKQSVRADIERKLEEVIPADAASDFDQ 427
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
L+ G VC P+C C +LC+ K
Sbjct: 428 GLIELGAIVCLPNGEPKCMECPARSLCRARK 458
>gi|94263508|ref|ZP_01287320.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456146|gb|EAT06289.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 19 LYTPKEL--EEIFYLFSL---KWPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ K + E+ + P +L + + ++VA +LS+++ D A
Sbjct: 1 MKKIKSINMEQAVARLEEVVPHYRVPVVDLIAVQSKDPYRILVATILSSRTRDETTAGAA 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ LF A + +GEK+L I +G YR K+ + L IL +F +IP T+E L
Sbjct: 61 ERLFVRAPDLASLARLGEKELARLIHPVGFYRAKAGYLARLPGILAAKFGGQIPATVEEL 120
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+LPG+GRK AN+++++AF P I VDTH+ RI N G TP E++L +P H
Sbjct: 121 IQLPGVGRKTANLVVAVAFEQPAICVDTHVHRIMNIWGYVRTATPEATEKALRAKLPLVH 180
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ +C+ C C +++LC R
Sbjct: 181 WRRINSLLVAFGQEICRPVGAHCDRCPLADLCPR 214
>gi|154249096|ref|YP_001409921.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
gi|154153032|gb|ABS60264.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
Length = 221
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 115/204 (56%), Gaps = 3/204 (1%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+++ + + ++P E + + +++ +LS +S D N A+K LFE +
Sbjct: 14 KDIDTLAKIIIERFPRDHCE---KDAYKVLITTILSQRSRDENTEVASKQLFEKYPNVES 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++L I+ G+YR+K+E II +S IL+ ++D +P LE L LPG+GRK AN
Sbjct: 71 IANAKPEELYELIKPAGLYREKAERIIIVSKILLEKYDGVVPNKLEELLELPGVGRKTAN 130
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
++L ++F + VDTH+ RISNR+G KTP + E+ L +I+ P+ + +V G
Sbjct: 131 IVLHVSFDQAALAVDTHVHRISNRLGWVKTKTPEQTEEELKKIMSPQLWGPINGSMVEFG 190
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
+ +CK P+C+ C ++ C K
Sbjct: 191 KNICKPISPRCEQCFLTECCDFFK 214
>gi|34541062|ref|NP_905541.1| A/G-specific adenine glycosylase [Porphyromonas gingivalis W83]
gi|34397377|gb|AAQ66440.1| A/G-specific adenine glycosylase [Porphyromonas gingivalis W83]
Length = 407
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSA 59
SS ++ S S + L EL + L + + + K +L + + + + ++ ++
Sbjct: 30 SSSRTRSLPSESKIDPLPYFPELRK---LLAEWYDANKRDLPWRQTDDPYRIWISEVILQ 86
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ E + E ++ +G Y ++ N+ + +++++F
Sbjct: 87 QTRVEQGRDYYHRFIECFPDVHSLSLASEDEVLKQWEGLGYYS-RARNLHRAARMIVSDF 145
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
IP+T + + RLPGIG A +LS A+ +P VD +IFR+ +R+
Sbjct: 146 GGCIPRTRQEILRLPGIGDYTAAAVLSFAYDLPFAAVDGNIFRVISRLMNLDTPIDTPAG 205
Query: 180 QS-----LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ + + ++ G C P C C + C
Sbjct: 206 KKLFSFWADALLDREAPARHNQAIMEFGALHCTPTSPSCLLCPVRRFC 253
>gi|16800865|ref|NP_471133.1| hypothetical protein lin1797 [Listeria innocua Clip11262]
gi|16414300|emb|CAC97028.1| lin1797 [Listeria innocua Clip11262]
gi|313618548|gb|EFR90537.1| A/G-specific adenine glycosylase [Listeria innocua FSL S4-378]
Length = 365
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + ++ +F ++P L + L G+
Sbjct: 69 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVMTDFSGEVPSDLTTILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I ++
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDQENP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCLLCPLQPFCEAHK 222
>gi|254465995|ref|ZP_05079406.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium Y4I]
gi|206686903|gb|EDZ47385.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium Y4I]
Length = 354
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 16/213 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
E+ + E+ + + + + ++ ++ Q+T V +
Sbjct: 8 AAEMSGELLAWYDIHAREMPWRVSPAERATGIRPDPYKVWLSEVMLQQTTVAAVREYFLR 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
T + A + + + +G Y ++ N++ + + +E + P + EGL +
Sbjct: 68 FISRWPTVLDLAAAEDADVMSEWAGLGYYA-RARNLLKCARTVADEREGVFPDSYEGLLK 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPK 189
LPGIG A I S+AF P +D ++ R+ +R+ P+ +++ + P +
Sbjct: 127 LPGIGPYTAAAISSIAFDRPETVLDGNVERVMSRLHDIHDPLPDVKPVLKERAAELTPAR 186
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C R P C C C
Sbjct: 187 RPGDYAQAVMDLGATICTPRSPACGICPWRAPC 219
>gi|46201025|ref|ZP_00207933.1| COG1194: A/G-specific DNA glycosylase [Magnetospirillum
magnetotacticum MS-1]
Length = 351
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 80/215 (37%), Gaps = 14/215 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKH 72
P +L I + + L + + + + ++ ++ Q+T V +
Sbjct: 1 MRPADLSAI---LLAWYDRDRRILPWRYGPGETADAYHVWLSEVMLQQTTVAAVIPYFQT 57
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + A ++ +G Y ++ N+ + + ++ + P GL +
Sbjct: 58 FTRRWPRVEDLAAAPVDEVMTAWAGLGYYA-RARNLHACAKLVAEWRGGRFPDDEAGLRQ 116
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPK 189
LPGIG A I ++AFG + VD ++ R+ R+ P +++ + P
Sbjct: 117 LPGIGDYTAAAIAAIAFGRRAVVVDGNVERVMARMFAVTEPLPAAKPRIKELAATLTPDL 176
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C R P C C C+
Sbjct: 177 RAGDYAQAVMDLGATICTPRGPACGLCPWRPTCQA 211
>gi|314934033|ref|ZP_07841396.1| A/G-specific adenine glycosylase [Staphylococcus caprae C87]
gi|313653144|gb|EFS16903.1| A/G-specific adenine glycosylase [Staphylococcus caprae C87]
Length = 347
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E + + E+ + N + + ++ ++ Q+ V T
Sbjct: 5 ESFKKRIVEWFNKNQREMPWRETTNPYYIWLSEVMLQQTQVNTVIDYYHRFVNRFPTIAA 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y +G Y ++ N + + +++ ++P + +L G+G
Sbjct: 65 LSEAHEDEVLKYWEGLGYYS-RARNFHTAVKEVESQYGGEVPSDPDLFKKLKGVGPYTQA 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWL 198
++S+AF P VD ++FR+ +R+ T + ++ + P + + +
Sbjct: 124 AVMSIAFNQPLATVDGNVFRVWSRLNNDYRDTKLQSTRKAFEEELNPYVQEDSGTFNQAM 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G +C + P C C + + C+ +
Sbjct: 184 MELGALICTPKSPLCLFCPVQDNCEAFHE 212
>gi|85374543|ref|YP_458605.1| hypothetical protein ELI_08580 [Erythrobacter litoralis HTCC2594]
gi|84787626|gb|ABC63808.1| hypothetical protein ELI_08580 [Erythrobacter litoralis HTCC2594]
Length = 347
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 14/204 (6%)
Query: 32 FSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +L + + + + ++ ++ Q+T V E+ T + +
Sbjct: 16 LLDWYDRHARDLPWRAQPGEPAADPYRVWLSEIMLQQTTVAAVKPYFARFTEVWPTVEAL 75
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E+ + +G Y + +++ + + L RLPG+G A
Sbjct: 76 AEASEEDVMAAWAGLGYYSRARNLLMAAKAVGDLGGFPETEA---ELRRLPGVGEYTAAA 132
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVL 200
I ++AFG + VD ++ R+ +R+ P + I P + + ++
Sbjct: 133 IAAIAFGRRAVVVDANVERVVSRLFAIEEPLPKARRAIRAHADAITPDRRAGDFAQAMMD 192
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G VC R PQC C ++ C+
Sbjct: 193 LGSQVCTTRAPQCLLCPLARFCEA 216
>gi|188582616|ref|YP_001926061.1| A/G-specific adenine glycosylase [Methylobacterium populi BJ001]
gi|179346114|gb|ACB81526.1| A/G-specific adenine glycosylase [Methylobacterium populi BJ001]
Length = 404
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + + + +
Sbjct: 9 LLAWYDRHRRALPWRALPGEQPDPYRVWLSEVMLQQTTVTAVKPYFQKFLTLFPSVTALA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + P T +GL +LPGIG A I
Sbjct: 69 AAPEEAVMSAWAGLGYYSRARNLHACAKA---VAAAGAFPDTEDGLRKLPGIGAYTAGAI 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + + L+
Sbjct: 126 AAIAFDRPAAAVDGNVERVMSRLHAIETPLPAARAQIRLFTQALVPDRRPGDFAQALMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 186 GATLCTPKRPACALCPWMLPCRARAE 211
>gi|322516029|ref|ZP_08068966.1| A/G-specific adenine glycosylase [Streptococcus vestibularis ATCC
49124]
gi|322125444|gb|EFX96790.1| A/G-specific adenine glycosylase [Streptococcus vestibularis ATCC
49124]
Length = 383
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWDSEKIVSFRRTLLDWYDREKRDLPWRRTKNPYYIWVSEIMLQQTQVQTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+KL +G Y + N+ + ++ +F + P T + + +L
Sbjct: 70 DWFPTVKDLAEAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGQFPDTYDNIAKLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + K + + +I P
Sbjct: 129 GIGPYTAGAISSIAFELPEPAVDGNVMRVMARLFEVNYDIGNPKNRKIFQAIMDILIDPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 189 RPGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|144900302|emb|CAM77166.1| A/G-specific adenine glycosylase MutY [Magnetospirillum
gryphiswaldense MSR-1]
Length = 354
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 11/208 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L + + + + ++ ++ Q+T V E T +
Sbjct: 11 RSLLAWYDRAGRALPWRKKGNERPDPYHVWLSEVMLQQTTVAAVTPYFLRFIERWPTIAQ 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + + +G Y ++ N+ + + ++ + P E L +LPG+G A
Sbjct: 71 LAAAPTDDVMHAWAGLGYYA-RARNLHACAKMVAQWRGGQFPDDEEALRKLPGVGDYTAA 129
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLV 199
I ++AFG + VD ++ R+ R+ P ++ + P + ++
Sbjct: 130 AITAIAFGKRAVVVDGNVERVMARLFAVTEHLPAAKGRLKALAAHLTPDMRPGDYAQAVM 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C R P C C N C+ +Q
Sbjct: 190 DLGATICSPRNPACGICPWMNECQGRRQ 217
>gi|67972268|dbj|BAE02476.1| unnamed protein product [Macaca fascicularis]
Length = 522
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVLLSAQSTDVNVNKATK 71
E+ + K +L + + + + V+ ++ Q+ V
Sbjct: 63 AEVTAFRRSLLSWYDQEKRDLPWRRRAEDEVDPDRRAYAVWVSEVMLQQTQVATVINYYT 122
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q + + +++ +G Y + ++ +
Sbjct: 123 GWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 182
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV--EQSL---LRII 186
LPG+GR A I S+AFG T VD ++ R+ R+ + + ++ +++
Sbjct: 183 LLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQRLWGLAQQLV 242
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 243 DPARPGDFNQAAMELGATVCTPQRPLCSQCPVQSLCRARQR 283
>gi|254422681|ref|ZP_05036399.1| A/G-specific adenine glycosylase [Synechococcus sp. PCC 7335]
gi|196190170|gb|EDX85134.1| A/G-specific adenine glycosylase [Synechococcus sp. PCC 7335]
Length = 359
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 88/213 (41%), Gaps = 9/213 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ E+ ++ + +L + + + + ++ ++ Q+ V K E
Sbjct: 1 MSNDEIIQLRRSLLSWYRQHGRDLPWRRTRDPYAIWISEVMLQQTQVKTVIPYYKRWLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + A ++ + +G Y ++ N+ + ++ +F P+ +E L GI
Sbjct: 61 FPTVQALAAADQQAVLKLWEGLGYYA-RARNLHQAAQQIVTKFGGVFPRKIENAITLKGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQY 192
GR A ILS AF P +D ++ R+ +R+ +A PNK + +++ P +
Sbjct: 120 GRTTAGGILSAAFNSPVPILDGNVKRVLSRL-IAYPAVPNKALAPLWELSEQLLDPNYPR 178
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + ++ G +C P C C + C
Sbjct: 179 DFNQAIMDLGATLCTRHNPACLLCPWQSKCAAY 211
>gi|254562966|ref|YP_003070061.1| endonuclease III [Methylobacterium extorquens DM4]
gi|254270244|emb|CAX26238.1| putative Endonuclease III (DNA-(apurinic or apyrimidinic site)
lyase) [Methylobacterium extorquens DM4]
Length = 238
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--------PSPKGELYYVNHFTLIVA 54
S ++ S + +P+ ++L+ I+ + S + P L F +V+
Sbjct: 6 SRSQNTSRRAAAPVAA---KRDLDAIYGILSKTYTTFDQTDDPWMTNGLS-STPFKSLVS 61
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V LS + V A L+E T +++ + + +L++ I+ + Y +K++N+ ++
Sbjct: 62 VCLSTMTITKRVVNAAVPLYEKVSTFEELRDLPDDELRSIIKPVAHYNRKTKNLKEMARQ 121
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+I ++D IP + L +L G+GRK +++++ F +I VDTH+ R+ NR+G+ +
Sbjct: 122 IIEDYDGNIPDNRDDLIKLQGVGRKCVDILMNFTFSQDSIAVDTHVLRVLNRLGVVDTTS 181
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P +H+ +AH WL+ HG +C AR P+C C + C
Sbjct: 182 AKQAADLINAQTPARHKRHAHEWLIQHGMKICVARTPKCADCPLPKHCDWY 232
>gi|300361731|ref|ZP_07057908.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri
JV-V03]
gi|300354350|gb|EFJ70221.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri
JV-V03]
Length = 209
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + +E + +P KGEL++ F L+ AVL+SAQ+TD VNK T F
Sbjct: 1 MEKLLSDEEARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFN 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++ +IRTIG+YR K++++ + I+ ++F+ +IPQ + L LPG
Sbjct: 61 DYPDSASLAQANIRDIEAHIRTIGLYRTKAKHLKETAQIITDKFNGEIPQDKKTLMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F IP I VDTH+ RIS R + K TP++VEQ L ++P +
Sbjct: 121 VGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|268319460|ref|YP_003293116.1| endonuclease III [Lactobacillus johnsonii FI9785]
gi|262397835|emb|CAX66849.1| endonuclease III [Lactobacillus johnsonii FI9785]
Length = 209
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + E + +P KGEL + F L+ AVL+SAQ+TD VN+ T F+
Sbjct: 1 MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++N+IRTIG+YR K++++ + I+ +FD +IP+ + L LPG
Sbjct: 61 DYPDSATLAQANIEDIENHIRTIGLYRTKAKHLKETAQIITEKFDGQIPKDKKILMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F +P I VDTH+ RIS R + K TP++VE+ L ++P + +
Sbjct: 121 VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|229821761|ref|YP_002883287.1| HhH-GPD family protein [Beutenbergia cavernae DSM 12333]
gi|229567674|gb|ACQ81525.1| HhH-GPD family protein [Beutenbergia cavernae DSM 12333]
Length = 303
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 81/205 (39%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + + + +L + + + ++V+ ++ Q+ V+ + E TP +
Sbjct: 14 LHARLTAWYAAHRRDLPWRGDGTDAWGVLVSEVMLQQTPVSRVDPVWRAWMERWPTPSDL 73
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + +G R+ + + + + +P L LPGIG A
Sbjct: 74 AAASPADVLVAWDRLGYPRRALR-LRECATAIRDTCGGIVPDDETALLALPGIGPYTAAA 132
Query: 144 ILSMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLR-IIPPKHQYN--AHYW 197
+ + A+G + +DT++ R+ R P + + EQ +P + +
Sbjct: 133 VRAFAYGRRAVVLDTNVRRVLARALGGEALPAPSLTRAEQDRAAAHLPLDDAGSALWNVA 192
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G VC AR P+C C + LC
Sbjct: 193 LMELGALVCTARSPRCDVCPLRELC 217
>gi|269137623|ref|YP_003294323.1| A/G-specific adenine glycosylase [Edwardsiella tarda EIB202]
gi|267983283|gb|ACY83112.1| A/G-specific adenine glycosylase [Edwardsiella tarda EIB202]
gi|304557688|gb|ADM40352.1| A/G-specific adenine glycosylase [Edwardsiella tarda FL6-60]
Length = 362
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 86/213 (40%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + ++ + + + ++ ++ Q+ V + +
Sbjct: 1 MMQAQQFAHAVLAWYARFGRKTLPWQHPKTPYRVWLSEVMLQQTQVATVLPYFQRFTQRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
Q + A ++ + +G Y ++ N+ + +++++ + PQ E + LPGIG
Sbjct: 61 PDVQALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQLIVSQHHGEFPQDFEQVAALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ G +D ++ R+ R PG +VE L ++ P
Sbjct: 120 RSTAGAILSLSLGQHHPILDGNVKRVLARCYAIPGWPGRKEVETRLWQLSGEVTPADGVS 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC +P+C+ C ++ C
Sbjct: 180 QFNQAMMDLGALVCTRSRPKCELCPLNAGCLAY 212
>gi|113969524|ref|YP_733317.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. MR-4]
gi|113884208|gb|ABI38260.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. MR-4]
Length = 372
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V + +
Sbjct: 10 RIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVLTLANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ + + + P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMVRDLYQGQFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G ++ Q ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPGQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|329667342|gb|AEB93290.1| putative endonuclease III [Lactobacillus johnsonii DPC 6026]
Length = 209
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + E + +P KGEL + F L+ AVL+SAQ+TD VN+ T F+
Sbjct: 1 MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K ++N+IRTIG+YR K+ ++ + I+ +FD +IP+ + L LPG
Sbjct: 61 DYPDSATLAQADIKDIENHIRTIGLYRTKARHLKETAQIITEKFDGQIPKDKKILMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F +P I VDTH+ RIS R + K TP++VE+ L ++P + +
Sbjct: 121 VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|325123965|gb|ADY83488.1| A/G specific adenine glycosylase [Acinetobacter calcoaceticus
PHEA-2]
Length = 344
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVDALGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVTQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTHRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|329296961|ref|ZP_08254297.1| adenine DNA glycosylase [Plautia stali symbiont]
Length = 361
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 10/213 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + + L + + + ++ ++ Q+ V + T
Sbjct: 3 QAPQFAQQMLEWYQRFGRKTLPWQLEKTPYKVWLSEVMLQQTQVAAVIPYFERFMARFPT 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N+ + ++ P + + LPG+GR
Sbjct: 63 VADLAAAPLDEVLHLWTGLGYYA-RARNLHKAAKQVVELHGGVFPPHFDDVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A ILS++ G+ +D ++ R+ R G +VE+ L +I P +
Sbjct: 122 TAGAILSLSLGLHFPILDGNVKRVLARCYAVSGWPGKKEVEKRLWQISEDVTPAEGVSQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G VC P+C C +++ C+ Q
Sbjct: 182 NQAMMDLGALVCTRSSPKCDICPLNSGCEAYAQ 214
>gi|251783277|ref|YP_002997582.1| A/G-specific adenine glycosylase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391909|dbj|BAH82368.1| A/G-specific adenine glycosylase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 388
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ + V +
Sbjct: 11 MWDEETIISFRRTLLNWYDQEKRDLPWRRTKNPYHIWVSEIMLQQTQVITVIPYYERFLN 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K+ E++L +G Y + N+ + ++ EF P + E +++L G
Sbjct: 71 WFPSIDKLANADEERLLKAWEGLGYYS-RVRNMQKAAQQVMTEFGGVFPSSYEDISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + R+I P
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQALMERLIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAY 224
>gi|227890022|ref|ZP_04007827.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus johnsonii
ATCC 33200]
gi|227849466|gb|EEJ59552.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus johnsonii
ATCC 33200]
Length = 209
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 113/195 (57%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + E + +P KGEL + F L+ AVL+SAQ+TD VN+ T F+
Sbjct: 1 MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++N+IRTIG+YR K++++ ++ I+ +FD +IP+ + L LPG
Sbjct: 61 DYPDSATLAQANIEDIENHIRTIGLYRTKAKHLKEIAQIITEKFDGQIPKDKKILMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F +P I VDTH+ RIS R + K TP++VE+ L ++P + +
Sbjct: 121 VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEKRLEELLPKEEWIHT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|330722276|gb|EGH00150.1| A/G-specific adenine glycosylase [gamma proteobacterium IMCC2047]
Length = 347
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + + + E ++ + +G Y ++
Sbjct: 28 DDPYRTWVSEIMLQQTQVATVIPYFERFMQRFPDVGSLAQAEEDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ +F+N+ P T + L +LPGIGR A ILS++ +D ++ R+ +
Sbjct: 87 RNLHKTAQLVHQQFNNQFPTTQDALEQLPGIGRSTAGAILSLSMQQRAPILDGNVKRVLS 146
Query: 166 RIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + Q P + + ++ G +C +P+C C +
Sbjct: 147 RFKTVEGWSGQSTTLKTLWQLAEDFTPQQRVADYTQAMMDLGATLCTRNQPKCSVCPLQQ 206
Query: 221 LCKRIKQ 227
C+ +Q
Sbjct: 207 HCQAYQQ 213
>gi|313623442|gb|EFR93654.1| A/G-specific adenine glycosylase [Listeria innocua FSL J1-023]
Length = 365
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYEANKRILPWRENTEPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E + +G Y + N+ + +I +F ++P L + L G+
Sbjct: 69 FPTMESFVNADEADILKAWEGLGYYS-RVRNLQTAMKQVITDFSGEVPSDLTTILSLKGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A ILS+A+ VD ++ R+ R+ E+ L ++I ++
Sbjct: 128 GPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDQENP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC KP C C + C+ K
Sbjct: 188 AAFNQGLMEIGALVCTPTKPMCLLCPLQPFCEAHK 222
>gi|299537407|ref|ZP_07050703.1| A/G-specific adenine DNA glycosylase [Lysinibacillus fusiformis
ZC1]
gi|298727142|gb|EFI67721.1| A/G-specific adenine DNA glycosylase [Lysinibacillus fusiformis
ZC1]
Length = 349
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + + K +L + + + + V+ ++ Q+ V E T
Sbjct: 6 VTEFRQSLVDWFNTEKRDLPWRHTTDPYKIWVSEVMLQQTRVDTVIPYYNRFMESFPTLD 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ L + +G Y + N+ + + ++ + +P +++L G+G A
Sbjct: 66 LLAEAPQEYLLKHWEGLGYYS-RVRNLQAGAREVLANYGGIVPDNRHEISKLKGVGPYTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ P VD ++ R+ +R+ +A KT E ++ +I P H + +
Sbjct: 125 GAILSIAYNKPEHAVDGNVMRVLSRVLDIREDIALPKTKKIFESAVEELIDPDHASSFNQ 184
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P+C C + C +
Sbjct: 185 GLMELGALICTPTSPKCLLCPVREYCTAFNE 215
>gi|329116556|ref|ZP_08245273.1| A/G-specific adenine glycosylase [Streptococcus parauberis NCFD
2020]
gi|326906961|gb|EGE53875.1| A/G-specific adenine glycosylase [Streptococcus parauberis NCFD
2020]
Length = 381
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ P++++ K +L + N + + V+ ++ Q+ V E
Sbjct: 13 MWDPEKIQSFRRTLLNWHDQEKRDLPWRRTKNPYFIWVSEIMLQQTQVQTVIPYYHRFIE 72
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +++ + E KL +G Y + N+ + ++ EFD P E ++ L G
Sbjct: 73 WFPTIEELASAPEHKLLKAWEGLGYYS-RVRNMQKAARQIMTEFDGTFPSRFEDISELKG 131
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF VD +I R+ R + K + + +I +
Sbjct: 132 IGPYTAGAIASIAFNQAQPAVDGNIMRVMARLFEVEYDIGNPKNRKIFQAIMEELIDSER 191
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G + A+ P+ I C
Sbjct: 192 PGDFNQALMDLGTDIESAKNPRPDDSPIKFFCAAY 226
>gi|311259428|ref|XP_003128095.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Sus scrofa]
Length = 542
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 81/236 (34%), Gaps = 16/236 (6%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NH----FTLIVAVL 56
Q +S G E+ + K +L + + + + V+ +
Sbjct: 68 RGKQASSGEGRGRDVAEVTAFRKSLLSWYDREKRDLPWRRLAESEVDPDRRAYAVWVSEV 127
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + T + + + +++ +G Y + ++
Sbjct: 128 MLQQTQVATVINYYTRWMQTWPTLRDLASASLEEVNQLWAGLGYYSRGRWLQTGARKVVE 187
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ LPG+GR A I S+AFG + ++FR+ R+ +
Sbjct: 188 ELGGHMPRTAETLQRLLPGVGRYTAGAIASIAFGQAAGVMYGNVFRVLCRVRAIGADPRS 247
Query: 177 -----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC + P C C + +LC+ ++
Sbjct: 248 TLVSQQLWSLAQQLVDPARPGDFNQAAMELGATVCTPQHPLCSQCPVQSLCRAHQR 303
>gi|293610467|ref|ZP_06692767.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826811|gb|EFF85176.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 344
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ + +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPFWAGLGYYARARNLHKAAGLVTQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTHRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|300727405|ref|ZP_07060814.1| A/G-specific adenine glycosylase [Prevotella bryantii B14]
gi|299775285|gb|EFI71884.1| A/G-specific adenine glycosylase [Prevotella bryantii B14]
Length = 333
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 11/204 (5%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + N + + ++ ++ Q+ V + + T +K+
Sbjct: 8 KLLEWYDAHGRDLPWRHTQNPYAIWLSEIILQQTRVVQGMDYWQRFMTMWPTVEKLAEAS 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E ++ + +G Y + ++ I+ P TL+ + +L G+G A+ I S
Sbjct: 68 EDEVLRLWQGLGYYSRARNLHVAAKQIVALGHF---PDTLDEIKKLKGVGDYTASAIASF 124
Query: 148 AFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AFGIPT VD + +R+ R + Q I+ + + ++ G
Sbjct: 125 AFGIPTAAVDGNFYRVLARYEGIDTPINSTDGKKLFAQLAQNIVAYDRPADFNQAMMDFG 184
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
C + P C C + C +
Sbjct: 185 ATQCTPKSPDCSICPFAEECVAYR 208
>gi|317498085|ref|ZP_07956388.1| A/G-specific adenine glycosylase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894673|gb|EFV16852.1| A/G-specific adenine glycosylase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 346
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K L + + + + ++ ++ Q+ V E+ T + + +
Sbjct: 11 LLHWYDYNKRILPWRENKDPYRIWISEIMLQQTRVEAVKPYFDRFMEVLPTVYDLAKVDD 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+L +G Y ++ N+ + + ++ E+ ++P + L L GIG A I S+A
Sbjct: 71 DRLMKLWEGLGYYN-RARNLKAAAQTIVEEYGGQLPADYDKLLSLKGIGMYTAGAIGSIA 129
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F + VD ++ R+ R+ + KT + + ++ +P + + L+ G
Sbjct: 130 FELQVPAVDGNVLRVLTRLWGDDSDILKDKTKKAMGRRVMEFMPEDRPGDFNQALIELGA 189
Query: 204 YVCKAR-KPQCQSCIISNLCKRIKQ 227
VC +P C C +CK K+
Sbjct: 190 TVCVPNGQPLCDQCPWDTVCKAYKE 214
>gi|167766044|ref|ZP_02438097.1| hypothetical protein CLOSS21_00537 [Clostridium sp. SS2/1]
gi|167712124|gb|EDS22703.1| hypothetical protein CLOSS21_00537 [Clostridium sp. SS2/1]
gi|291560002|emb|CBL38802.1| A/G-specific adenine glycosylase [butyrate-producing bacterium
SSC/2]
Length = 346
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K L + + + + ++ ++ Q+ V E+ T + + +
Sbjct: 11 LLHWYDYNKRILPWRENKDPYRIWISEIMLQQTRVEAVKPYFDRFMEVLPTVYDLAKVDD 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+L +G Y ++ N+ + + ++ E+ ++P + L L GIG A I S+A
Sbjct: 71 DRLMKLWEGLGYYN-RARNLKAAAQTIVEEYGGQLPADYDKLLSLKGIGMYTAGAIGSIA 129
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F + VD ++ R+ R+ + KT + + ++ +P + + L+ G
Sbjct: 130 FELQVPAVDGNVLRVLTRLWGDDSDILKDKTKKAMGRRVMEFMPEDRPGDFNQALIELGA 189
Query: 204 YVCKAR-KPQCQSCIISNLCKRIKQ 227
VC +P C C +CK K+
Sbjct: 190 TVCVPNGQPLCDQCPWDTVCKAYKE 214
>gi|83941804|ref|ZP_00954266.1| A/G-specific adenine glycosylase [Sulfitobacter sp. EE-36]
gi|83847624|gb|EAP85499.1| A/G-specific adenine glycosylase [Sulfitobacter sp. EE-36]
Length = 354
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 74/211 (35%), Gaps = 16/211 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + + ++ ++ Q+T V +
Sbjct: 13 ILLEWYDVHARAMPWRVPPAARAAGVRPDPYRTWLSEVMLQQTTVATVRDYFQRFTARWP 72
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y ++ N++ + ++ + D P L +LPGIG
Sbjct: 73 TVADLAAAADADVMGEWAGLGYYA-RARNLLKCARAVVADHDGHFPADHAALLKLPGIGP 131
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAH 195
A + S+AF +P +D ++ R+ R+ P + + P +
Sbjct: 132 YTAAAVSSIAFDLPFTVLDGNVERVMARLYDIHTPLPAAKPDLMARAQALTPTTRPGDYA 191
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C + P C C + C +
Sbjct: 192 QAVMDLGATICTPKSPACGICPWRDPCLARR 222
>gi|238918235|ref|YP_002931749.1| adenine DNA glycosylase [Edwardsiella ictaluri 93-146]
gi|238867803|gb|ACR67514.1| A/G-specific adenine glycosylase, putative [Edwardsiella ictaluri
93-146]
Length = 362
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 84/213 (39%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + ++ + + + ++ ++ Q+ V + +
Sbjct: 1 MMQAQQFAHAVLAWYARFGRKTLPWQHPKTPYRVWLSEVMLQQTQVATVLPYFQRFTQRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
Q + + ++ + +G Y ++ N+ + ++++ + P E + LPGIG
Sbjct: 61 PDVQTLASAPLDEVLHLWTGLGYYA-RARNLHKAAQLIVSRHHGEFPHDFEQVAALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQY 192
R A ILS++ G +D ++ R+ R PG K VE L ++ P
Sbjct: 120 RSTAGAILSLSLGQHHPILDGNVKRVLARCYAVPGWPGRKDVETRLWQLSGEVTPADGVS 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC +P+C+ C ++ C
Sbjct: 180 QFNQAMMDLGALVCTRSRPKCELCPLNAGCLAY 212
>gi|10640069|emb|CAC11921.1| endonuclease III related protein [Thermoplasma acidophilum]
Length = 197
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 103/189 (54%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
P + + F +++ +LS ++ D ++A + L+E + ++ I +
Sbjct: 2 PAHRFVFRDPFWMLITTVLSQRTKDETTDEAARSLYEKYRDIDGLADADPDEVGRIISKV 61
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
G +R KS ++ ++ I+ + ++ ++P +++ L LPG+G K A V+L+ F P I VDT
Sbjct: 62 GFWRVKSRKVVEIARIIRDRYNYRVPDSIDELVSLPGVGLKTAKVVLAEGFNRPAIAVDT 121
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
H+FRIS+RIG + +TP + + L RIIP Q + +V G+ +C+ +P C C +
Sbjct: 122 HVFRISHRIGWSSARTPEETSEELERIIPVDLQVGFNPMMVEFGKAICRPVRPLCDRCPV 181
Query: 219 SNLCKRIKQ 227
S C+ ++
Sbjct: 182 SEYCRYYEE 190
>gi|99082485|ref|YP_614639.1| A/G-specific DNA-adenine glycosylase [Ruegeria sp. TM1040]
gi|99038765|gb|ABF65377.1| A/G-specific DNA-adenine glycosylase [Ruegeria sp. TM1040]
Length = 353
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 81/215 (37%), Gaps = 16/215 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
E++ + + + E+ + + + + ++ ++ Q+T V +
Sbjct: 8 AEQLSQDLLVWYDTHAREMPWRVGPAARASGVRPDPYRIWLSEVMLQQTTVAAVKDYFER 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ A + + +G Y ++ N++ + ++ EF+ P EGL
Sbjct: 68 FTRRWPRVGDLAAAEDGDVMAEWAGLGYYA-RARNLLKCARVVAEEFEGVFPDAYEGLIA 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPK 189
LPGIG A I ++AF P +D ++ R+ R+ P ++ + P
Sbjct: 127 LPGIGPYTAAAISAIAFDRPETVLDGNVERVMARLHDEHEPLPAVKPVLKAHAAHLTPSA 186
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C + P C C + C+
Sbjct: 187 RPGDYAQAVMDLGATICTPKSPACGICPWRDPCRA 221
>gi|78484465|ref|YP_390390.1| A/G-specific adenine glycosylase [Thiomicrospira crunogena XCL-2]
gi|78362751|gb|ABB40716.1| A/G-specific DNA-adenine glycosylase [Thiomicrospira crunogena
XCL-2]
Length = 350
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+LEE + + +L + + + V+ ++ Q+ V + + +
Sbjct: 3 DLEEFSQTLLEWFDRSGRHDLPWQQNKTPYRVWVSEIMLQQTQVQTVIPYYERFMKAFPS 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++++ ++ +G Y + N++ + I+++E K PQ LEG+ LPGIGR
Sbjct: 63 VEALAQASQEEVLSHWSGLGYYA-RGRNLLKAAQIVVDELQGKFPQDLEGMMALPGIGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A +LS+A +D ++ R+ R + K + Q + P + +
Sbjct: 122 TAGAVLSIASQQRHPILDGNVKRVLCRYDAVESWSGEKQTEAMLWQRANELTPEQRFDDY 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C KP+C++C + C+ +
Sbjct: 182 TQAIMDLGATLCTRSKPKCEACPVQKNCQAWR 213
>gi|284044330|ref|YP_003394670.1| HhH-GPD family protein [Conexibacter woesei DSM 14684]
gi|283948551|gb|ADB51295.1| HhH-GPD family protein [Conexibacter woesei DSM 14684]
Length = 272
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 9/198 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + +L + + + ++V+ ++ Q+ V + E + +
Sbjct: 9 DAILSWYGAVRRDLPWRRTTDPYRILVSEVMLQQTQVARVVPYYEAFLERFPDEVALGSA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G ++L + P+ EGL LPGIG A + S
Sbjct: 69 PTADVLRLWSGLGYN----RRALALQACARAVARDGWPRAAEGLRALPGIGPYTAAAVAS 124
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
AFG VDT++ R+ R+ A +TP + ++P + + ++ G VC
Sbjct: 125 FAFGEQVAAVDTNVRRVIERVDRAH-RTPRPLAARAAELLPAGRAADWNQAMMELGATVC 183
Query: 207 KARKPQCQSCIISNLCKR 224
AR P C +C ++ C+
Sbjct: 184 TARSPGCDACPVTG-CRS 200
>gi|118470417|ref|YP_890305.1| base excision DNA repair protein, HhH-GPD family protein
[Mycobacterium smegmatis str. MC2 155]
gi|118171704|gb|ABK72600.1| base excision DNA repair protein, HhH-GPD family protein
[Mycobacterium smegmatis str. MC2 155]
Length = 293
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 9/200 (4%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V E T A G
Sbjct: 8 LLSWYDHARRDLPWRRPGVSAWQILVSEFMLQQTPVSRVEPIWSAWIERWPTASATAAAG 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G ++++ + + ++ +E+D+ +P+ ++ L LPGIG A +
Sbjct: 68 PAEVLRAWGKLGY-PRRAKRLHECAVVIASEYDDVVPRDVDTLLTLPGIGAYTARAVACF 126
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL--RIIPPKH-QYNAHYWLVLHGRY 204
A+ VDT++ R+ R P + ++PP L+ G
Sbjct: 127 AYQASVPVVDTNVRRVVTRAVHGAADAPASTRDLDMVAALLPPDTTAPTFSAALMELGAT 186
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC AR P+C C + + C+
Sbjct: 187 VCTARSPRCGICPL-SHCRW 205
>gi|110633122|ref|YP_673330.1| A/G-specific DNA-adenine glycosylase [Mesorhizobium sp. BNC1]
gi|110284106|gb|ABG62165.1| A/G-specific DNA-adenine glycosylase [Chelativorans sp. BNC1]
Length = 374
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 16/208 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + L + + +++ ++ ++ Q+T V +
Sbjct: 20 EDLLLWYDRHHRRLPWRMPPAMIRGGERPDPYSVWLSEIMLQQTTVSAVKPYFEKFLARW 79
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + A + +G Y ++ N+ + + + P T GL LPGIG
Sbjct: 80 PTVEALAAAETDDVMKAWAGLGYYS-RARNLKKCAEAVAERHGGRFPATEAGLKDLPGIG 138
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A I ++AF P VD ++ R+ R+ P ++ + ++P +
Sbjct: 139 DYTAAAIAAIAFNRPAAVVDGNVERVVTRLKAIETPLPAAKPEIRNVVEALLPQARPGDF 198
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C + C
Sbjct: 199 AQAMMDLGATICTPRRPSCILCPVGEHC 226
>gi|117919630|ref|YP_868822.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. ANA-3]
gi|117611962|gb|ABK47416.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. ANA-3]
Length = 372
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V + +
Sbjct: 10 RIVNWYDTHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ + + + P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMVRDLYQGQFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G ++ Q ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPEQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|282858599|ref|ZP_06267761.1| endonuclease III [Prevotella bivia JCVIHMP010]
gi|282588603|gb|EFB93746.1| endonuclease III [Prevotella bivia JCVIHMP010]
Length = 206
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
F EL + + F LI A LLSAQ TD +N T LF+ + M
Sbjct: 1 MDYFRTNVGEVTTELMFGSAFQLICATLLSAQCTDKRINAITPALFQHFPDAKTMAKAEV 60
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + Y++++ K+++++ +S +L+ + ++P + L +LPG+GRK ANV+ ++
Sbjct: 61 EDVFEYVKSVSYPNSKAKHLVEMSRMLVEAYGGEVPSDPKELVKLPGVGRKTANVVQAVW 120
Query: 149 FGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
FG PT+ VDTH++R+S+R+GL P TP KVE L++ I + NAH+W++LHGRY+C
Sbjct: 121 FGKPTLAVDTHVYRVSHRLGLVPKEANTPRKVEDYLMKHIAKEEVTNAHHWILLHGRYIC 180
Query: 207 KARKPQCQSCIISNLCKRI 225
K+ +P C+ C C ++
Sbjct: 181 KSARPLCEKCPFEAFCPKL 199
>gi|238854247|ref|ZP_04644591.1| endonuclease III [Lactobacillus gasseri 202-4]
gi|282852216|ref|ZP_06261568.1| endonuclease III [Lactobacillus gasseri 224-1]
gi|311110690|ref|ZP_07712087.1| endonuclease III [Lactobacillus gasseri MV-22]
gi|238833058|gb|EEQ25351.1| endonuclease III [Lactobacillus gasseri 202-4]
gi|282556635|gb|EFB62245.1| endonuclease III [Lactobacillus gasseri 224-1]
gi|311065844|gb|EFQ46184.1| endonuclease III [Lactobacillus gasseri MV-22]
Length = 209
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + +E + +P KGEL++ F L+ AVL+SAQ+TD VNK T F
Sbjct: 1 MEKLLSDEEARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFS 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K ++ +I TIG+YR K++++ + I+ ++F+ +IP+ + L LPG
Sbjct: 61 DYPDSASLAQASIKDIEAHIHTIGLYRTKAKHLKETAQIITDKFNGEIPKDKKTLMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F IP I VDTH+ RIS R + K TP++VEQ L ++P +
Sbjct: 121 VGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|325282512|ref|YP_004255053.1| A/G-specific adenine glycosylase [Deinococcus proteolyticus MRP]
gi|324314321|gb|ADY25436.1| A/G-specific adenine glycosylase [Deinococcus proteolyticus MRP]
Length = 368
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 69/203 (33%), Gaps = 10/203 (4%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ +L + + + + VA +L Q+ V + T Q
Sbjct: 34 RALLDWFDESGRDLPWRVGPEGGRDPYRVWVAEILLQQTQVVRGRLYYERFLTAFPTVQA 93
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + + G Y + + ++ + P T +G LPG+G A
Sbjct: 94 LAEAPQGAVLKAWEGCGYYARARNLHRAAQTVVASGEF---PTTYDGWLALPGVGPYTAA 150
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ S+A+G D ++ R+ R+ T V+ ++ P + ++ G
Sbjct: 151 AVSSLAYGEARAVSDGNVRRVLARVLAERQPTDAWVQARADDLLDPLRPAAWNEAVMDLG 210
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
VC + P+C C + C
Sbjct: 211 ATVCTPKAPECPRCPLRGWCAAY 233
>gi|304396766|ref|ZP_07378646.1| A/G-specific adenine glycosylase [Pantoea sp. aB]
gi|304355562|gb|EFM19929.1| A/G-specific adenine glycosylase [Pantoea sp. aB]
Length = 378
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + A ++ + +G Y ++
Sbjct: 46 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLAAAPLDEVLHLWTGMGYYA-RA 104
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + P+ + ++ LPG+GR A ILS++ G +D ++ R+
Sbjct: 105 RNLHKAAKQIVEVHQGEFPRNFDDVSALPGVGRSTAGAILSLSLGQHFPILDGNVKRVLA 164
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + + ++ G VC KP+C+ C +++
Sbjct: 165 RCYAIGGWPGKKEVEKRLWQISEEVTPAEGVSQFNQAMMDLGALVCTRSKPKCEICPLNS 224
Query: 221 LCKRI 225
C+
Sbjct: 225 GCEAY 229
>gi|319947091|ref|ZP_08021325.1| A/G-specific adenine glycosylase [Streptococcus australis ATCC
700641]
gi|319747139|gb|EFV99398.1| A/G-specific adenine glycosylase [Streptococcus australis ATCC
700641]
Length = 384
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + + + + ++ ++ Q+ V + +
Sbjct: 11 MWEEEKIASFREKLLAWYDAHKRDLPWRRTQDPYKIWISEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E+KL +G Y + N+ + ++ + P + E +++L G
Sbjct: 71 WFPTIKDLANAPEEKLLKAWEGLGYYS-RVRNMQKAAQQMMEDHGGVFPSSYEAISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+P VD ++ R+ R + + + +I P
Sbjct: 130 IGPYTAGAIASIAFGLPEPAVDGNVMRVLARLFEVDYDIGVPTNRKIFQAMMEFLIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|306834263|ref|ZP_07467382.1| A/G-specific adenine glycosylase [Streptococcus bovis ATCC 700338]
gi|304423612|gb|EFM26759.1| A/G-specific adenine glycosylase [Streptococcus bovis ATCC 700338]
Length = 384
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 84/209 (40%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + V+ ++ Q+ V V +
Sbjct: 11 MWDDEKIASFRRTLLAWYDNEKRDLPWRRTKNPYHIWVSEIMLQQTQVVTVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++++F+ + P T + + L G
Sbjct: 71 WFPTVDALAKAPEEKLLKAWEGLGYYS-RVRNMQKAAQEIMDDFNGEFPSTYDDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|170725680|ref|YP_001759706.1| A/G-specific adenine glycosylase [Shewanella woodyi ATCC 51908]
gi|169811027|gb|ACA85611.1| A/G-specific adenine glycosylase [Shewanella woodyi ATCC 51908]
Length = 382
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V E + + + ++ +Y +G Y ++
Sbjct: 57 KTPYKVWVSEIMLQQTQVSTVIPYYLKFMERFPSIGALADAPQDEVLHYWTGLGYYA-RA 115
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ +EF + P + + LPGIGR A +LS++ G +D ++ R+
Sbjct: 116 RNLHKSAQIIRDEFQGEFPTNFDNVLALPGIGRSTAGAVLSLSLGQHHAILDGNVKRVLA 175
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G VE L + P + + ++ G +C KP C C ++
Sbjct: 176 RHDAIQGWPGQKAVENQLWSLTDSLTPKQDVQKYNQAMMDMGATICTRSKPSCDKCPVAI 235
Query: 221 LCKR 224
C+
Sbjct: 236 DCEA 239
>gi|297539910|ref|YP_003675679.1| A/G-specific adenine glycosylase [Methylotenera sp. 301]
gi|297259257|gb|ADI31102.1| A/G-specific adenine glycosylase [Methylotenera sp. 301]
Length = 350
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + N + + V+ ++ Q+ V + + + ++ +
Sbjct: 17 RHDLPWQNTVDPYAIWVSEIMLQQTQVAAVIGYYSKFMQRFPNIASLANATQDEVLQHWS 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + +++E + PQ E + L GIGR A I S AF +
Sbjct: 77 GLGYYS-RARNLHNAAVTIMDEHKGQFPQDFEMIQTLSGIGRSTAAAIASFAFNQVQTIL 135
Query: 157 DTHIFRISNRIGLAPGKTP-NKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L G KVE+ L +++P + L+ G +C KP
Sbjct: 136 DGNVKRVLARHFLVEGWPSSPKVEKELWLLAEKLLPEQGMVAYTQGLMDLGATLCTRSKP 195
Query: 212 QCQSCIISNLCKRIK 226
+C +C ++ CK ++
Sbjct: 196 KCSNCPLNGSCKALQ 210
>gi|262280590|ref|ZP_06058374.1| A/G specific adenine glycosylase [Acinetobacter calcoaceticus
RUH2202]
gi|262258368|gb|EEY77102.1| A/G specific adenine glycosylase [Acinetobacter calcoaceticus
RUH2202]
Length = 344
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIG A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVTQQGKF---PETLEEWIALPGIGPSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEALCPTQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|126649513|ref|ZP_01721754.1| adenine glycosylase [Bacillus sp. B14905]
gi|126593838|gb|EAZ87761.1| adenine glycosylase [Bacillus sp. B14905]
Length = 348
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 88/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + + + K +L + + + + V+ ++ Q+ V E T
Sbjct: 10 VTEFRHSLVEWFNAEKRDLPWRHTTDPYKIWVSEVMLQQTRVDTVIPYYNRFMESFPTLD 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + L + +G Y ++ N+ + + ++ + +P +++L G+G A
Sbjct: 70 LLAEAPQDYLLKHWEGLGYYS-RARNLQAGAREVLENYGGVVPDNRHEISKLKGVGPYTA 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ P VD ++ R+ +R+ +A KT E ++ +I P + + +
Sbjct: 129 GAILSIAYNKPEHAVDGNVMRVLSRVLNISEDIAIPKTKKIFEAAVEELIDPTNASSFNQ 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P+C C + C +
Sbjct: 189 GLMELGALICTPTSPKCLLCPVREYCTAFNE 219
>gi|116629667|ref|YP_814839.1| EndoIII-related endonuclease [Lactobacillus gasseri ATCC 33323]
gi|116095249|gb|ABJ60401.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri
ATCC 33323]
Length = 209
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + ++ + +P KGEL++ F L+ AVL+SAQ+TD VNK T F
Sbjct: 1 MEKLLSDEKARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFS 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K ++ +I TIG+YR K++++ + I+ ++F+ +IP+ + L LPG
Sbjct: 61 DYPDSASLAQASIKDIEAHIHTIGLYRTKAKHLKETAQIITDKFNGEIPKDKKTLMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F IP I VDTH+ RIS R + K TP++VEQ L ++P +
Sbjct: 121 VGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|313676681|ref|YP_004054677.1| a/g-specific adenine glycosylase [Marivirga tractuosa DSM 4126]
gi|312943379|gb|ADR22569.1| A/G-specific adenine glycosylase [Marivirga tractuosa DSM 4126]
Length = 348
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + + +L + + + + ++ ++ Q+ + ++
Sbjct: 7 NLLINWYNQHQRDLPWRDTSDPYRIWLSEIILQQTRVDQGLPYYNKFINQYPSVHELAKA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y ++ N+ + ++N++D + P T E L +L GIG+ A I S
Sbjct: 67 PEDEVMRLWQGLGYYS-RARNLHECAKSIVNQYDGEFPDTYEELLKLKGIGKYTAAAIAS 125
Query: 147 MAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSL----LRIIPPKHQYNAHYWLVLH 201
AF VD ++FR+ R ++ + K ++ ++IP + + L+
Sbjct: 126 FAFDRAVPVVDGNVFRVLARYLDISDDISQPKTFKTFFNVAKQLIPENQAASFNQALMEL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C RK +C++C +S C+
Sbjct: 186 GATICTPRKFKCENCPLSLDCQA 208
>gi|169634888|ref|YP_001708624.1| A/G specific adenine glycosylase [Acinetobacter baumannii SDF]
gi|169794250|ref|YP_001712043.1| A/G specific adenine glycosylase [Acinetobacter baumannii AYE]
gi|213158753|ref|YP_002321174.1| A/G-specific adenine glycosylase [Acinetobacter baumannii AB0057]
gi|215481808|ref|YP_002323990.1| A/G-specific adenine glycosylase [Acinetobacter baumannii
AB307-0294]
gi|301345885|ref|ZP_07226626.1| A/G specific adenine glycosylase [Acinetobacter baumannii AB056]
gi|301509953|ref|ZP_07235190.1| A/G specific adenine glycosylase [Acinetobacter baumannii AB058]
gi|301594531|ref|ZP_07239539.1| A/G specific adenine glycosylase [Acinetobacter baumannii AB059]
gi|332850328|ref|ZP_08432662.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6013150]
gi|332871564|ref|ZP_08440058.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6013113]
gi|169147177|emb|CAM85036.1| A/G specific adenine glycosylase [Acinetobacter baumannii AYE]
gi|169153680|emb|CAP02878.1| A/G specific adenine glycosylase [Acinetobacter baumannii]
gi|213057913|gb|ACJ42815.1| A/G-specific adenine glycosylase [Acinetobacter baumannii AB0057]
gi|213987314|gb|ACJ57613.1| A/G-specific adenine glycosylase [Acinetobacter baumannii
AB307-0294]
gi|332730786|gb|EGJ62096.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6013150]
gi|332731418|gb|EGJ62710.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6013113]
Length = 344
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + S + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAASLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTHRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|152994789|ref|YP_001339624.1| A/G-specific adenine glycosylase [Marinomonas sp. MWYL1]
gi|150835713|gb|ABR69689.1| A/G-specific adenine glycosylase [Marinomonas sp. MWYL1]
Length = 350
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ F + + ++ ++ Q+ V T + +
Sbjct: 8 APRVLAWFDEHGRKSLPWQENKTPYRVWISEIMLQQTQVTTVIPYYHKFMTSFPTVEALA 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++ + +G Y ++ N+ + +L++EFD++ PQT+EG+ LPGIGR A I
Sbjct: 68 EAEQDEVLAHWSGLGYYA-RARNMHKAAKMLVDEFDSEFPQTVEGVCELPGIGRSTAAAI 126
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLV 199
LS++ G+ +D ++ R+ R P K E ++ + +P + + ++
Sbjct: 127 LSISRGVQAAILDGNVKRVLARFHAVPTWPGDKKTENAMWELAECYMPNERCGDYTQAMM 186
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
G +C KPQC C + + C+
Sbjct: 187 DLGATLCTRSKPQCLLCPLQDDCQA 211
>gi|58337445|ref|YP_194030.1| endonuclease III [Lactobacillus acidophilus NCFM]
gi|58254762|gb|AAV42999.1| endonuclease III [Lactobacillus acidophilus NCFM]
Length = 209
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AV++SAQ+TD VN+ +
Sbjct: 4 KLLSDEEARNVLKRILELYPDAKGELQWDNKFHLLCAVVMSAQTTDKMVNRVMPKFSKDF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ + +K++ IRTIG+YR K++++ + IL+ +++++IP+ + L LPG+G
Sbjct: 64 PTPENLADAPIEKIEEDIRTIGLYRSKAKHLKETAKILVEKYNSQIPKDKKSLMTLPGVG 123
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RIS + + TP++VEQ L I+P H+
Sbjct: 124 EKTANVVLAEGYGVPAIAVDTHVSRISKKFHIVGQNATPHEVEQRLEAILPKDEWIKTHH 183
Query: 197 WLVLHGRYVCKAR 209
++L GRY +R
Sbjct: 184 AMILFGRYTMPSR 196
>gi|254780479|ref|YP_003064892.1| A/G-specific adenine glycosylase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040156|gb|ACT56952.1| A/G-specific adenine glycosylase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 356
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 90/223 (40%), Gaps = 17/223 (7%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVN 67
+ P+ + I + + L + + + ++ ++ Q+T V
Sbjct: 1 MPQPEHI--IQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVE 58
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
K + T + + ++++ + +G Y ++ N+ + I++ +++ P +
Sbjct: 59 PYFKKFMQKWPTIFCLSSAKDEEILSAWAGLGYYT-RARNLKKCADIIVKKYEGNFPHKV 117
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLR 184
E L +LPGIG A+ I+++AF + VDT+I RI +R P ++ +
Sbjct: 118 EILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKPAPLYHKTIKNYARK 177
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
I + ++ G +C + KP C C I C +
Sbjct: 178 ITSTSRPGDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTFSE 220
>gi|270263069|ref|ZP_06191339.1| hypothetical protein SOD_d00840 [Serratia odorifera 4Rx13]
gi|270042757|gb|EFA15851.1| hypothetical protein SOD_d00840 [Serratia odorifera 4Rx13]
Length = 410
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 7/214 (3%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ ++ + ++ + + ++ ++ Q+ V +
Sbjct: 44 LMMQAQQFAQVVLDWYQRYGRKTLPWQLDKTAYQVWLSEVMLQQTQVATVIPYFQRFMAR 103
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + ++ + +G Y ++ N+ + ++ + + P T E + LPGI
Sbjct: 104 FPNVRALADAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVAQHGGEFPTTFEEIAALPGI 162
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQ 191
GR A +LS+A G +D ++ R+ R G K VE L RI P K
Sbjct: 163 GRSTAGAVLSLALGQHYPILDGNVKRVLARCYAVEGWPGKKDVENRLWRISEDVTPAKGV 222
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 223 GQFNQAMMDLGAMVCTRSKPKCELCPLNTGCIAY 256
>gi|22298621|ref|NP_681868.1| adenine glycosylase [Thermosynechococcus elongatus BP-1]
gi|22294801|dbj|BAC08630.1| adenine glycosylase [Thermosynechococcus elongatus BP-1]
Length = 368
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + + + + V+ ++ Q+ V + T + A
Sbjct: 20 LLNWYQQQGRDLPWRHSRDPYAIWVSEIMLQQTQVATVIPYYQRWLATFPTLPDLAAAEL 79
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + + +G Y ++ ++ + ++ + P++ E + LPGIGR A ILS A
Sbjct: 80 ETVLKLWQGLGYYA-RARHLHRAAQQIMTHHAGEFPRSYEAVVALPGIGRSTAGAILSAA 138
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR----IIPPKHQYNAHYWLVLHGRY 204
F P +D ++ R+ R+ P + E L + ++ P+ + + L+ G
Sbjct: 139 FNQPQPILDGNVKRVLARLY-GLTVPPKQAEAQLWQWSAQLLCPQSPRDFNQALMDLGAT 197
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
+C R P C +C + C +
Sbjct: 198 ICTPRHPLCHACPWQHHCLAHR 219
>gi|220936105|ref|YP_002515004.1| A/G-specific DNA-adenine glycosylase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997415|gb|ACL74017.1| A/G-specific DNA-adenine glycosylase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 348
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 30 YLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + N + + V+ ++ Q+ V + +
Sbjct: 8 QRLLAWFDRHGRHDLPWQQDINPYRVWVSEIMLQQTQVGTVIPYYQRFMARFPDVASLAD 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ ++ +G Y ++ N+ + ++ ++ + P+ +E L LPGIGR A IL
Sbjct: 68 APLDQVLHHWSGLGYYA-RARNLHKAAQVVRDQHGGRFPEDIEALQSLPGIGRSTAGAIL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVL 200
++A G +D ++ R+ R G + V P + ++
Sbjct: 127 ALACGQRQPILDGNVKRVLARHRAVEGWSGETVVLRDLWCLAEAHTPAERVAEYTQAIMD 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G VC +P C C ++ C+
Sbjct: 187 LGATVCTRSRPACGRCPVAEDCRA 210
>gi|332873383|ref|ZP_08441337.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6014059]
gi|332738446|gb|EGJ69319.1| A/G-specific adenine glycosylase [Acinetobacter baumannii 6014059]
Length = 344
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGY 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|167648323|ref|YP_001685986.1| A/G-specific adenine glycosylase [Caulobacter sp. K31]
gi|167350753|gb|ABZ73488.1| A/G-specific adenine glycosylase [Caulobacter sp. K31]
Length = 350
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 84/218 (38%), Gaps = 16/218 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATK 71
++ + + + +L + + + + ++ ++ Q+T +
Sbjct: 3 DIPALRAALLAWYDAQARDLPWRTGPAAGKAGQRSDPYRVWLSEVMLQQTTVPHATPYFL 62
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T + A+ + L +G Y ++ N+++ + + E P T L
Sbjct: 63 SFTQRWPTVSSLAAVADDDLMAAWAGLGYYA-RARNLLACARAVAAEHGGVFPDTEAALR 121
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPP 188
LPG+G A + ++AF VD ++ R+ R+ P+ ++++ ++
Sbjct: 122 ALPGVGAYTAAAVAAIAFDREANVVDGNVERVMARLFAVEDPVPDAKPELKRLAGELVTA 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC+ + P C C +S C+ K
Sbjct: 182 ARPGDWAQALMDLGATVCRPKGPLCDRCPVSAWCEGFK 219
>gi|311772157|pdb|3N5N|X Chain X, Crystal Structure Analysis Of The Catalytic Domain And
Interdomain Connector Of Human Muty Homologue
gi|311772158|pdb|3N5N|Y Chain Y, Crystal Structure Analysis Of The Catalytic Domain And
Interdomain Connector Of Human Muty Homologue
Length = 287
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 22 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 81
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 82 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 141
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 142 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 201
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 202 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 233
>gi|85712857|ref|ZP_01043899.1| A/G-specific DNA glycosylase [Idiomarina baltica OS145]
gi|85693321|gb|EAQ31277.1| A/G-specific DNA glycosylase [Idiomarina baltica OS145]
Length = 345
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 75/187 (40%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V K E + + + + + +G Y ++
Sbjct: 27 KTPYRVWLSEIMLQQTQVNTVIPYFKRFVERFPSLPDLAEAEQDTVLSLWTGLGYYA-RA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + +D ++P + L LPGIGR A ILS+ FG P +D ++ R+
Sbjct: 86 RNLHKAAQLAVERYDGQLPDSQAELETLPGIGRSTAGAILSLGFGKPAAILDGNVKRVLA 145
Query: 166 RIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R Q + P + + ++ G VC KP CQ+C + +
Sbjct: 146 RYFGESEWPGKTAVQRSLWQHSEALTPAHRHDDYNQAMMDLGALVCTRSKPDCQACPLRS 205
Query: 221 LCKRIKQ 227
C ++
Sbjct: 206 DCLAYQE 212
>gi|295395585|ref|ZP_06805779.1| A/G-specific adenine glycosylase [Brevibacterium mcbrellneri ATCC
49030]
gi|294971604|gb|EFG47485.1| A/G-specific adenine glycosylase [Brevibacterium mcbrellneri ATCC
49030]
Length = 312
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 12/209 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+++ + + S + L + + + ++V+ ++S Q+ V + E TP+
Sbjct: 4 QKVARALTDWFASAQRPLPWRAADTSAWAVLVSEIMSHQTPMSRVEPVWRDWMERWPTPR 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ ++G R+ L D ++P+T EGL LPG+G A
Sbjct: 64 ALADAPTAEVLVAWGSLGYPRRALR----LQECARAIGDGEVPRTEEGLLALPGVGPYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYW 197
+ S AFG TI +D ++ R+ +R+ + + +P H +
Sbjct: 120 AAVASFAFGERTIVLDVNVRRVLSRVFAGVDHPKPALSKKEHAWARQFVPKDHHVEFNAT 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC +R P C C ++ C +K
Sbjct: 180 AMELGALVCTSRNPSCHECPLAEHCAWLK 208
>gi|254452362|ref|ZP_05065799.1| A/G-specific adenine glycosylase [Octadecabacter antarcticus 238]
gi|198266768|gb|EDY91038.1| A/G-specific adenine glycosylase [Octadecabacter antarcticus 238]
Length = 350
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 80/215 (37%), Gaps = 16/215 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ +I + E+ + + + + ++ ++ Q+T V
Sbjct: 1 MRDITETLLDWYDIHAREMPWRVMPAMRKAGHLPDPYAVWLSEVMLQQTTVAAVRAYHTR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ T + A + + +G Y ++ N++ + ++ + PQT + L
Sbjct: 61 FMALWPTVSALAAAKDADVMAAWAGLGYYA-RARNLLKCARAVVADHGGAFPQTYDALIG 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPK 189
LPGIG A I ++AF + +D ++ R+ +R+ P + + R
Sbjct: 120 LPGIGPYTAAAISAIAFDKASTVLDGNVERVMSRLYNDHTPLPAAKPLLMEFAKRHTSQV 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C + P C C + + CK
Sbjct: 180 RPGDYAQAVMDLGATICTPKNPACGICPVRSACKA 214
>gi|114046757|ref|YP_737307.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. MR-7]
gi|113888199|gb|ABI42250.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. MR-7]
Length = 372
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V + +
Sbjct: 10 RIVNWYDTHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ + + P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKLVRDLHQGQFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G ++ Q ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPEQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAVDCKA 211
>gi|110640052|ref|YP_680262.1| A/G-specific adenine glycosylase [Cytophaga hutchinsonii ATCC
33406]
gi|110282733|gb|ABG60919.1| A/G-specific adenine glycosylase [Cytophaga hutchinsonii ATCC
33406]
Length = 355
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 85/212 (40%), Gaps = 9/212 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ TP+ ++ + K EL + + + + ++ ++ Q+ +
Sbjct: 1 MITPEIKKKFPKELIKWYLKNKRELPWRDTRDPYPIWLSEIILQQTRVQQGMPYYFSFLK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + M EK + + + +G Y ++ N+ + ++++F P + + L L G
Sbjct: 61 AFPTVKHMAKASEKDILSLWQGLGYYS-RARNLHKTALQVMSQFGGSFPGSYKELLDLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKH 190
+G A I S A+ VD +++R+ +R+ + + ++IP K
Sbjct: 120 VGPYTAAAIASFAYKEQVAVVDGNVYRVLSRVFGIYEDITQNSSKKTFAALAQQLIPQKD 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G C +P+C C + +C
Sbjct: 180 PDIYNQAIMEFGALHCTPAEPKCGDCCFAEIC 211
>gi|83855281|ref|ZP_00948811.1| A/G-specific adenine glycosylase [Sulfitobacter sp. NAS-14.1]
gi|83843124|gb|EAP82291.1| A/G-specific adenine glycosylase [Sulfitobacter sp. NAS-14.1]
Length = 354
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 74/211 (35%), Gaps = 16/211 (7%)
Query: 31 LFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + + + + ++ ++ Q+T V +
Sbjct: 13 ILLEWYDVHARAMPWRVPPAARAAGVRPDPYRIWLSEVMLQQTTVATVRDYFQRFTARWP 72
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + A + + +G Y ++ N++ + ++ + D P L +LPGIG
Sbjct: 73 TVADLAAAADADVMGEWAGLGYYA-RARNLLKCARAVVADHDGHFPADHAALLKLPGIGP 131
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAH 195
A + S+AF +P +D ++ R+ R+ P + + P +
Sbjct: 132 YTAAAVSSIAFDLPFTVLDGNVERVMARLYDIHTPLPAAKPDLMARAQALTPTTRPGDYA 191
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C + P C C C +
Sbjct: 192 QAVMDLGATICTPKSPACGICPWRAPCLARR 222
>gi|307708759|ref|ZP_07645221.1| A/G-specific adenine glycosylase [Streptococcus mitis NCTC 12261]
gi|307615125|gb|EFN94336.1| A/G-specific adenine glycosylase [Streptococcus mitis NCTC 12261]
Length = 391
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLENAPEERLLKAWEGLGYYS-RVRNLQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|307709232|ref|ZP_07645691.1| A/G-specific adenine glycosylase [Streptococcus mitis SK564]
gi|307620178|gb|EFN99295.1| A/G-specific adenine glycosylase [Streptococcus mitis SK564]
Length = 391
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F ++ P T EG++ L
Sbjct: 70 DWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMIDFGSQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF + VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLSEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + I N +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPIKNFSAAYQ 225
>gi|302795638|ref|XP_002979582.1| hypothetical protein SELMODRAFT_1746 [Selaginella moellendorffii]
gi|300152830|gb|EFJ19471.1| hypothetical protein SELMODRAFT_1746 [Selaginella moellendorffii]
Length = 286
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 84/215 (39%), Gaps = 14/215 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKH 72
E+ I + K +L + +++ V+ ++ Q+T V
Sbjct: 1 EVTIIRRDLLDWYDRNKRDLPWRPDDFVGENVEERAYSVWVSEMMLQQTTVGRVKDYFPR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + ++++ + +G YR+ S + + ++ P+ + L +
Sbjct: 61 WMSKWPSLSHLSQASQEEVNSLWAGLGYYRRAS-SCDQGAKHIVENSGGIFPRDVAELRQ 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK--VEQSLLRIIPPKH 190
+PGIG A I S+AF P VD ++ R+ +R+ T + + I+ +
Sbjct: 120 IPGIGNYTAGAIASIAFKQPVPAVDVNVIRVISRLRAISDATRESKLLWKLAGEIVDLER 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G VCK + P C C I+ CK
Sbjct: 180 PGSFNQALMDLGSAVCKTKAPLCSGCPIAGSCKAF 214
>gi|322375302|ref|ZP_08049815.1| A/G-specific adenine glycosylase [Streptococcus sp. C300]
gi|321279565|gb|EFX56605.1| A/G-specific adenine glycosylase [Streptococcus sp. C300]
Length = 392
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E +L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEDRLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I PK
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVDHDIGVPSNRKIFQAMMEILIDPK 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|313202593|ref|YP_004041250.1| DNA-(apurinic or apyrimidinic site) lyase [Paludibacter
propionicigenes WB4]
gi|312441909|gb|ADQ78265.1| DNA-(apurinic or apyrimidinic site) lyase [Paludibacter
propionicigenes WB4]
Length = 220
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 111/202 (54%), Gaps = 3/202 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ +E L ++ + K L Y + + L+V V+LSAQ +D ++N+ FE +
Sbjct: 2 KQNWQEHLELLMQQYANRKHPLDYKSRYQLLVLVILSAQDSDKHINELASAFFEAYPSIN 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++L +I T+ + K+ ++ L+ + ++ + IP T+ LT+LPGIGRK A
Sbjct: 62 SLAKASAEELHQHISTVRNFGNKAGWLVKLAQQVGDDDN--IPTTMSELTKLPGIGRKSA 119
Query: 142 NVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
NVI+ + + VD H+ R++ RIG+A G P K+E+ L+ I+P + + +
Sbjct: 120 NVIIRESGNEAEGVIVDLHVVRVAPRIGIATGTQPEKIEKQLMSIVPRERWNDIGMAISF 179
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
GR VC+ P+C SC++S +C
Sbjct: 180 MGREVCRPSHPKCDSCVMSAVC 201
>gi|269218313|ref|ZP_06162167.1| A/G-specific adenine glycosylase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212441|gb|EEZ78781.1| A/G-specific adenine glycosylase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 292
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+F+ + + L + + ++V ++S Q+ V + E P +
Sbjct: 7 VFFRLLRWYAANSRPLPWREPTTSAWAVLVCEVMSQQTPVARVMPSWHEWMERWPEPADL 66
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ +G R+ + + + +++ +P + + L LPGIG A+
Sbjct: 67 AAASPAEVILAWGNLGYPRRALR-LRECAAAVAADWNGVLPSSRDDLLTLPGIGPYTADA 125
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
+++ ++ ++ +DT+ R+ R+ + + + + + + L
Sbjct: 126 VIAFSYRKRSVVLDTNTRRVLCRLHGTAAPPSHLRKDEIARADAMVPLEDDLAWQWNAAL 185
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC A+ P CQ C + C
Sbjct: 186 MELGALVCTAKNPACQECPLRPDCAWF 212
>gi|239502775|ref|ZP_04662085.1| A/G-specific DNA glycosylase [Acinetobacter baumannii AB900]
Length = 344
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGY 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|86136903|ref|ZP_01055481.1| A/G-specific adenine glycosylase [Roseobacter sp. MED193]
gi|85826227|gb|EAQ46424.1| A/G-specific adenine glycosylase [Roseobacter sp. MED193]
Length = 372
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 84/224 (37%), Gaps = 17/224 (7%)
Query: 17 GCLYTPKELE-EIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTD 63
+ TP+ E E+ + + + + + + ++ ++ Q+T
Sbjct: 9 APVATPQAAETELNQQLLGWYDRNARTMPWRVSPADRARGLRPDPYRVWLSEVMLQQTTV 68
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V + + + + A + ++ +G Y ++ N++ + ++ E +
Sbjct: 69 AAVTEYFQRFTRRWPSVLDLAAAQDAEVMAEWAGLGYYA-RARNLLKCARVVAQELEGTF 127
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQS 181
P + + L +LPGIG A + S+AF +D ++ R+ R+ P V +
Sbjct: 128 PDSYDALLKLPGIGPYTAAAVASIAFDRAETVLDGNVERVMARLHDIHDPLPAVKPVLKE 187
Query: 182 LL-RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ P + ++ G +C + P C C + C+
Sbjct: 188 HAGVLTPQLRPGDYAQAVMDLGATICTPKNPACGICPWRSPCQA 231
>gi|42519123|ref|NP_965053.1| endonuclease III [Lactobacillus johnsonii NCC 533]
gi|41583410|gb|AAS09019.1| probable endonuclease III [Lactobacillus johnsonii NCC 533]
Length = 209
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L + E + +P KGEL + F L+ AVL+SAQ+TD VN+ T F+
Sbjct: 1 MEELLSDDEARLVLKRILSLYPDAKGELNWDTKFHLLCAVLMSAQTTDKMVNRTTPKFFK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ K ++N+IRTIG+YR K++++ + I+ +FD +IP+ + L LPG
Sbjct: 61 DYPDSATLAQADIKDIENHIRTIGLYRTKAKHLKETAQIITEKFDGQIPKDKKILMTLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K ANV+L+ F +P I VDTH+ RIS R + K TP++VEQ L ++P + +
Sbjct: 121 VGEKTANVVLAEGFKVPAIAVDTHVSRISKRFNIVSAKATPHEVEQRLEELLPKEEWIHT 180
Query: 195 HYWLVLHGRYVCKAR 209
H+ ++L GRY AR
Sbjct: 181 HHAMILFGRYTMPAR 195
>gi|325979076|ref|YP_004288792.1| A/G-specific adenine glycosylase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325179004|emb|CBZ49048.1| A/G-specific adenine glycosylase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 384
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 84/209 (40%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + V+ ++ Q+ V V +
Sbjct: 11 MWDDEKIASFRRTLLAWYDNEKRDLPWRRTKNPYHIWVSEIMLQQTQVVTVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++++F+ + P T + + L G
Sbjct: 71 WFPTIDALAKAPEEKLLKAWEGLGYYS-RVRNMQKAAQEIMDDFNGEFPSTYDDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|90420096|ref|ZP_01228004.1| A/G-specific adenine glycosylase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335430|gb|EAS49180.1| A/G-specific adenine glycosylase [Aurantimonas manganoxydans
SI85-9A1]
Length = 368
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 16/218 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKA 69
P +L + L + + + ++ ++ Q+T V
Sbjct: 2 PADLRPFADHLLAWYDRHARVLPWRVSPQDRARGIRPAPYRVWLSEIMLQQTTVAAVKAY 61
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ A + + +G Y ++ N+ + + + EF PQT
Sbjct: 62 FAKFTARWPHVADLAAAPQPAVLGEWAGLGYYA-RARNLHACAIRVSEEFGGAFPQTAAA 120
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRII 186
L LPGIG + I ++AF P VD ++ R+ R+ P + +
Sbjct: 121 LRTLPGIGDYTSAAIAAIAFDEPAAVVDGNVERVVTRLFSIETPLPQARKDIRLRTAELT 180
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P + + ++ G +C ++P C C + +C+
Sbjct: 181 PQERPGDFAQAMMDLGATICTPKRPSCMVCPVRPMCRA 218
>gi|288906114|ref|YP_003431336.1| A/G-specific adenine glycosylase [Streptococcus gallolyticus UCN34]
gi|288732840|emb|CBI14416.1| putative A/G-specific adenine glycosylase [Streptococcus
gallolyticus UCN34]
Length = 384
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 84/209 (40%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + V+ ++ Q+ + V +
Sbjct: 11 MWDDEKIASFRRTLLAWYDNEKRDLPWRRTKNPYHIWVSEIMLQQTQVITVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++++F+ + P T + + L G
Sbjct: 71 WFPTVDALAKAPEEKLLKAWEGLGYYS-RVRNMQKAAQEIMDDFNGEFPSTYDDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAIASIAFDLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|220927383|ref|YP_002502685.1| A/G-specific adenine glycosylase [Methylobacterium nodulans ORS
2060]
gi|219951990|gb|ACL62382.1| A/G-specific adenine glycosylase [Methylobacterium nodulans ORS
2060]
Length = 405
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + L + + + + ++ ++ Q+T V + T +
Sbjct: 16 LLVWYDRHRRALPWRAEAGAVPDPYRVWLSEIMLQQTTVAAVKPYFARFLDRFPTIAALA 75
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + + P T+EGL +LPGIG A I
Sbjct: 76 AAPEEAVMSAWAGLGYYSRARNLH---ACAKAVVAAGGFPDTVEGLRKLPGIGAYTAGAI 132
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF VD ++ R+ +R+ P ++ ++P + + ++
Sbjct: 133 AAIAFDRREAAVDGNVERVISRLFAIETPLPAAKPEIRTLAESLVPARRPGDFAQAVMDL 192
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 193 GATICTPKRPACALCPWMPPCRARAE 218
>gi|114765137|ref|ZP_01444282.1| A/G-specific adenine glycosylase [Pelagibaca bermudensis HTCC2601]
gi|114542541|gb|EAU45567.1| A/G-specific adenine glycosylase [Roseovarius sp. HTCC2601]
Length = 348
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 22/220 (10%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNV 66
+ P + + +L + + + + ++ ++ Q+T V
Sbjct: 1 MRDPARAAD----LLDWYDRHARDLPWRVGPRARAAGIRPDPYRVWLSEIMLQQTTVPAV 56
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T + A + + +G Y ++ N++ + ++ E PQ
Sbjct: 57 KPYFEAFTTRWPTVSDLAAAEDADVMAAWAGLGYYA-RARNLLKCARVVAAEHGGVFPQG 115
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK----VEQSL 182
LEGL LPG+G A + ++AF IP VD ++ R+ R+ P E +
Sbjct: 116 LEGLLSLPGVGPYTAGAVAAIAFDIPATVVDGNVERVMARLHAEHTPLPQAKPILTEMA- 174
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + ++ G +C R P C C + C
Sbjct: 175 AALTPQERPGCYAQAVMDLGATICSPRNPACGLCPWRSAC 214
>gi|240139929|ref|YP_002964406.1| A/G-specific adenine glycosylase [Methylobacterium extorquens AM1]
gi|240009903|gb|ACS41129.1| A/G-specific adenine glycosylase [Methylobacterium extorquens AM1]
Length = 404
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 9 LLTWYDRHRRALPWRALPGETPDPYRVWLSEVMLQQTTVTAVKPYFVKFLTLFPNVAALA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + + P T +GL +LPGIG A I
Sbjct: 69 AAPEEAVMSAWAGLGYYSRARNLH---ACAKSVASAGGFPDTEDGLRKLPGIGAYTAGAI 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + + L+
Sbjct: 126 AAIAFDRPAAAVDGNVERVMSRLHAIETPLPTARAQIRLFTQALVPDRRPGDFAQALMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 186 GATLCTPKRPACALCPWMLPCRARAE 211
>gi|70726094|ref|YP_253008.1| hypothetical protein SH1093 [Staphylococcus haemolyticus JCSC1435]
gi|68446818|dbj|BAE04402.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 348
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 8/203 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + E+ + N + + ++ ++ Q+ V T + + E
Sbjct: 11 LIKWFNENQREMPWRETSNPYYIWLSEVMLQQTQVKTVIDYYHKFISRFPTIEDLSQANE 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ Y +G Y ++ N + + +E+ +P T + +L G+G +LS+A
Sbjct: 71 DEVLKYWEGLGYYS-RARNFHTAVKEVASEYKGVVPSTPDQFGKLKGVGPYTQAAVLSIA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWLVLHGRY 204
F P VD ++FR+ +R+ + ++ + + P H + ++ G
Sbjct: 130 FNKPLATVDGNVFRVWSRLNNDQRDIKLQSTRKAYEKELQPYVYHHSGTFNQAMMELGAL 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC + P C C + + C K+
Sbjct: 190 VCTPKNPLCLFCPVQDNCSAFKE 212
>gi|153810437|ref|ZP_01963105.1| hypothetical protein RUMOBE_00818 [Ruminococcus obeum ATCC 29174]
gi|149833616|gb|EDM88697.1| hypothetical protein RUMOBE_00818 [Ruminococcus obeum ATCC 29174]
Length = 285
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L EI + + K L + N + V+ ++ Q+ V + Q
Sbjct: 12 LNEIVQPLTDWYRQNKRILPWRDQNNAYYTWVSEIMLQQTRVEAVKPYFQRFIGELPDVQ 71
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL +G Y + N+ + + ++ E++ +P + E L L GIG A
Sbjct: 72 ALAECPEEKLMKLWEGLGYYN-RVRNMQTAARTVVCEYEGVLPASYEELLSLKGIGNYTA 130
Query: 142 NVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+ IP VD ++ R+ +R + ++E++LL I+P + + +
Sbjct: 131 GAIASIAYQIPVPAVDGNVLRVISRITEDRQDIMKQSVRRQIEENLLGIMPEETPGDFNQ 190
Query: 197 WLVLHGRYVCKARKP-QCQSCIISNLCKRIK 226
L+ G VC P +C++C +S C +
Sbjct: 191 ALMELGAVVCVPNGPARCEACPVSEYCLAYR 221
>gi|308188051|ref|YP_003932182.1| A/G-specific adenine glycosylase [Pantoea vagans C9-1]
gi|308058561|gb|ADO10733.1| A/G-specific adenine glycosylase [Pantoea vagans C9-1]
Length = 360
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + A ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + P+ + ++ LPG+GR A +LS++ G +D ++ R+
Sbjct: 87 RNLHKAAKQIVEVHRGEFPRNFDDVSALPGVGRSTAGAVLSLSLGQHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + + ++ G VC KP+C+ C +++
Sbjct: 147 RCYAVSGWPGKKEVEKRLWQISEEVTPAEGVSQFNQAMMDLGAIVCTRSKPKCEICPLNS 206
Query: 221 LCKRI 225
C+
Sbjct: 207 GCEAY 211
>gi|126659338|ref|ZP_01730474.1| mutator mutT protein A/G-specific adenine glycosylase [Cyanothece
sp. CCY0110]
gi|126619420|gb|EAZ90153.1| mutator mutT protein A/G-specific adenine glycosylase [Cyanothece
sp. CCY0110]
Length = 398
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + L + N + + V+ ++ Q+ V + + T + +
Sbjct: 51 LLIWYQQQGRHLPWRNTRDPYLIWVSEIMLQQTQVKTVLPYYQRWLDTFPTLESLATAEL 110
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++ +G Y ++ N+ + IL+NE+D PQ L + +LPGIGR A ILS A
Sbjct: 111 QEVLKAWEGLGYYT-RARNLHKAAQILLNEYDGVFPQQLPDVLKLPGIGRTTAGGILSAA 169
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR---IIPPKHQYNAHYWLVLHGRYV 205
F +D ++ R+ +R+ P ++ I+ P++ + + L+ G +
Sbjct: 170 FNQRISILDGNVKRVLSRLMALPVSPKKGIQSLWQLSDLILDPENPRDFNQALMDLGAEI 229
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C KP+C C ++ C +Q
Sbjct: 230 CVKTKPRCLLCPWTSHCLAYQQ 251
>gi|313884256|ref|ZP_07818022.1| endonuclease III [Eremococcus coleocola ACS-139-V-Col8]
gi|312620703|gb|EFR32126.1| endonuclease III [Eremococcus coleocola ACS-139-V-Col8]
Length = 214
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T + + I L P EL + N F L+VAV+LSAQ+TD VNK T LFE
Sbjct: 1 MAGTMTQERMARILDQLRLLIEDPVSELNFENPFQLLVAVILSAQTTDKQVNKLTPSLFE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
Q + +++ YI++IG++ K++ +++ L+ +F ++P + L LPG
Sbjct: 61 RFPDAQSLAQASPSQVEPYIKSIGLFHNKAKYLVATGKRLVEDFGGQVPDNRKDLESLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNA 194
+GRK ANV+L AFG P I VDTH+ R++ +G+ +P +VE++L+ +IP A
Sbjct: 121 VGRKTANVVLGQAFGQPAIAVDTHVERVAKAMGVVDQAASPLQVEKALMALIPENQWVEA 180
Query: 195 HYWLVLHGRYV 205
H+ L+L GRY
Sbjct: 181 HHLLLLFGRYY 191
>gi|303249010|ref|ZP_07335255.1| A/G-specific adenine glycosylase [Desulfovibrio fructosovorans JJ]
gi|302489596|gb|EFL49536.1| A/G-specific adenine glycosylase [Desulfovibrio fructosovorans JJ]
Length = 365
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 9/207 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + + K +L + + + + V+ +++ Q+ V E+
Sbjct: 5 NAFIPLLLDWFAANKRDLPWRRAYDPYAVWVSEIMAQQTQMDRVVSYFNRFMELFPDIAA 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E + +G Y ++ N+ + + ++ P L + LPGIG A
Sbjct: 65 LADAPEDAVLKAWEGLGYYS-RARNLHAAAKRIMTAHGGVFPGELAAIRALPGIGDYTAG 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYW 197
+ S+AFG + VD ++ R+ R +V + ++P +
Sbjct: 124 AVASIAFGRDAVAVDANVQRVLARACDIDVPVKEPAGKTRVMEIARALLPSSRAREYNEA 183
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ G VC+ + P C +C I+ C+
Sbjct: 184 LMEFGALVCRPKNPDCAACPIAGACQA 210
>gi|33519831|ref|NP_878663.1| endonuclease III [Candidatus Blochmannia floridanus]
gi|33504176|emb|CAD83438.1| endonuclease III [Candidatus Blochmannia floridanus]
Length = 213
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 2/206 (0%)
Query: 24 ELEEIFYLFSLKWPSPKG--ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ +I +L Y + F +VA LLSAQ+ DV VNK TK+LF+IA+TPQ
Sbjct: 5 KRYQILCRLKNYNYDMHDQDDLVYHSVFECLVATLLSAQARDVQVNKITKNLFKIANTPQ 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
ML +G ++ +I+ IG++ KSEN+I + ++LIN+++ +P+ L LPGIGRK A
Sbjct: 65 SMLNLGVDGVKQHIKCIGLFNSKSENLIKICNLLINQYNGIVPKKRLELESLPGIGRKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
N+IL++ FG+ TI VDTH+FR NR A G VE+ L+ ++P + + N H WLV H
Sbjct: 125 NIILNVCFGLSTIAVDTHVFRFCNRSCFASGHNVIAVERKLMSVVPREFKRNCHRWLVKH 184
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
GRY CK++ P C +CII++LC+ K+
Sbjct: 185 GRYTCKSKNPDCNNCIINDLCEFDKK 210
>gi|193078750|gb|ABO13821.2| A/G specific adenine glycosylase [Acinetobacter baumannii ATCC
17978]
Length = 355
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + E T + +
Sbjct: 8 DALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGY 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + P+TLE LPGIGR A ++
Sbjct: 68 ATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ R L+ + ++ + + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + C+ +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQAHCQAYQQ 211
>gi|306832154|ref|ZP_07465308.1| A/G-specific adenine glycosylase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425593|gb|EFM28711.1| A/G-specific adenine glycosylase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 384
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + V+ ++ Q+ V V +
Sbjct: 11 MWDDEKIASFRRTLLAWYDNEKRDLPWRRTKNPYHIWVSEIMLQQTQVVTVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++++F + P T + + L G
Sbjct: 71 WFPTVDDLAKAPEEKLLKAWEGLGYYS-RVRNMQKAAQEIMDDFKGEFPSTYDDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAIASIAFDLPDPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|197118690|ref|YP_002139117.1| endonuclease III-like DNA glycosidase [Geobacter bemidjiensis Bem]
gi|197088050|gb|ACH39321.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter bemidjiensis Bem]
Length = 220
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 101/180 (56%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++V+ +LS ++ D +A++ LF +ADTPQKM + +++ I +G YR K+
Sbjct: 35 RDPYKVLVSCILSLRTRDQTTAEASQRLFALADTPQKMTELSVPEIEQAIYPVGFYRVKA 94
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ I+ LS + ++P LE L G+GRK AN++L++ +G P I VD H+ RI N
Sbjct: 95 QQILELSFQIGELHQGRVPDELETLLTFKGVGRKTANLVLTLGYGKPGICVDIHVHRICN 154
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R G P + E +L + +PP++ + LV G+ C P+C +C + LC R+
Sbjct: 155 RWGYVKTVNPEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSTCPLYALCDRV 214
>gi|293394474|ref|ZP_06638770.1| A/G-specific adenine glycosylase [Serratia odorifera DSM 4582]
gi|291422939|gb|EFE96172.1| A/G-specific adenine glycosylase [Serratia odorifera DSM 4582]
Length = 361
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + ++ + + ++ ++ Q+ V +
Sbjct: 2 MMQAQQFSHVVLDWYQRYGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMARF 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+++ ++ + +G Y ++ N+ + ++ + + P T E + LPGIG
Sbjct: 62 PNVRQLAEAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVAQHGGEFPTTFEQIAALPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ G +D ++ R+ R G +VE L +I P
Sbjct: 121 RSTAGAILSLSLGQHYPILDGNVKRVLARCYAVEGWPGKKEVENRLWQISRDVTPANGVG 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 181 QFNQAMMDLGAMVCTRSKPKCELCPLNAGCIAY 213
>gi|308811646|ref|XP_003083131.1| adenine-DNA glycosylase-related / MYH-related (ISS) [Ostreococcus
tauri]
gi|116055009|emb|CAL57086.1| adenine-DNA glycosylase-related / MYH-related (ISS) [Ostreococcus
tauri]
Length = 788
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ ++V+ ++S Q+ V + T + + ++ + +G YR+
Sbjct: 383 AYGVLVSEIMSQQTQIDRVAEYWTRWVARWPTARALAEASQEDVNEEWAGLGYYRRAG-F 441
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
++ + + + + P+T L ++PG+G ++ + S+AFG T VD ++ R+ R
Sbjct: 442 LLKGAKYVSEDLGGRYPRTAAELLKIPGVGPYTSSAVSSIAFGERTAAVDGNVHRVLTRA 501
Query: 168 GLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L G ++ + + + + + ++ G VC P+C C I+ C
Sbjct: 502 RLIKGDPTKGETAKELRRVADAFVDAERSGDFNQAMMELGATVCTPTNPKCAQCPIAAWC 561
Query: 223 K 223
+
Sbjct: 562 E 562
>gi|18959262|ref|NP_579850.1| A/G-specific adenine DNA glycosylase [Rattus norvegicus]
gi|48428185|sp|Q8R5G2|MUTYH_RAT RecName: Full=A/G-specific adenine DNA glycosylase; AltName:
Full=MutY homolog; Short=rMYH
gi|18845094|gb|AAL79551.1|AF478683_1 MYH [Rattus norvegicus]
Length = 516
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 182 LLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLV 241
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 DPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAHQR 282
>gi|217972505|ref|YP_002357256.1| A/G-specific adenine glycosylase [Shewanella baltica OS223]
gi|217497640|gb|ACK45833.1| A/G-specific adenine glycosylase [Shewanella baltica OS223]
Length = 363
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDDYHGIFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K VE L ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEAQLWQLTDAVTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|209963845|ref|YP_002296760.1| A/G-specific adenine glycosylase [Rhodospirillum centenum SW]
gi|209957311|gb|ACI97947.1| A/G-specific adenine glycosylase [Rhodospirillum centenum SW]
Length = 408
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 11/230 (4%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAV 55
+ KK+++ + G L + + + L + + + + ++
Sbjct: 10 AGKKAEAAPPDQRPGGLPDAGSRRDRGARLLSWYDRHRRVLPWRAAPGERADPYRVWLSE 69
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
++ Q+T V + T + A + +G Y ++ N+ + +
Sbjct: 70 IMLQQTTVATVGPYFQEFLRRWPTVLDLAAADLDDVLRAWAGLGYYA-RARNLHRCAVAV 128
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ + P T L LPGIG A + ++AF P VD ++ R+ R+ P
Sbjct: 129 ARDHGGRFPDTEAELRHLPGIGDYTAAAVAAIAFDRPAAAVDGNVERVLARVFRVEEPLP 188
Query: 176 NK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++P + L G +C R+P+C C C
Sbjct: 189 AAKPRLRALAGALVPEARAGDHTQALFDLGATICTPRRPRCILCPWQPDC 238
>gi|319902741|ref|YP_004162469.1| A/G-specific DNA-adenine glycosylase [Bacteroides helcogenes P
36-108]
gi|319417772|gb|ADV44883.1| A/G-specific DNA-adenine glycosylase [Bacteroides helcogenes P
36-108]
Length = 346
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ + + A
Sbjct: 6 ERLLEWYKENKRELPWRDTTDPYLIWISEIILQQTRVAQGYEYFLRFVRRFPDVASLAAA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + K P T E + L G+G A I +
Sbjct: 66 SEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGKFPVTYEDVRGLKGVGDYTAAAICA 120
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP----NKVEQ-SLLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R KV ++ + + + ++
Sbjct: 121 FAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKVFAVLAQEMLDERRPTDYNQAIMDF 180
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C +++ C + +
Sbjct: 181 GAIQCTPQSPNCMFCPLADRCFALSK 206
>gi|320333089|ref|YP_004169800.1| A/G-specific adenine glycosylase [Deinococcus maricopensis DSM
21211]
gi|319754378|gb|ADV66135.1| A/G-specific adenine glycosylase [Deinococcus maricopensis DSM
21211]
Length = 338
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 11/209 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ + + L + + + + V+ +L Q+ +
Sbjct: 3 DTKDLQQALLGWFDAHARTLPWRAGAEGARDPYRVWVSEVLLQQTQVARGLVYFERFLAA 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + E + G Y + + + F P + + LPG+
Sbjct: 63 FPTVQALADAPEADVLKAWEGCGYYARARNLHRAAKRVAAQGF----PASYDAWRALPGV 118
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
G A + S+ P +D ++ R+ R+ T + ++ +
Sbjct: 119 GPYTAAAVSSLTLNEPRAVMDGNVRRVMARLHAERTPTDAWAQARADELLDHARPGAWNE 178
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P+C +C +S C
Sbjct: 179 AVMDLGATVCIPKAPRCGACPVSAHCAAF 207
>gi|254430651|ref|ZP_05044354.1| A/G specific adenine glycosylase [Cyanobium sp. PCC 7001]
gi|197625104|gb|EDY37663.1| A/G specific adenine glycosylase [Cyanobium sp. PCC 7001]
Length = 389
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 22/214 (10%)
Query: 30 YLFSLKW-PSPKGELYYV--------------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
W S + L + + + + VA ++ Q+ +
Sbjct: 18 RRLLAWWAGSGRHTLPWKLRGDGGRPRGGEGLDPYPIWVAEVMLQQTQLRVALPYWQRWM 77
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + A E+ L + +G Y + P+ L LP
Sbjct: 78 THVPGLEVLAAAEERDLLLLWQGLGYYSRARRL----QQGAQQLLGQTWPRDLADWLALP 133
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV---EQSLLRIIPPKHQ 191
GIG A ILS AF +P +D ++ R+ R+ +P ++ Q ++ +
Sbjct: 134 GIGPSTAGSILSSAFDLPFAILDGNVKRVLARLTASPRPPARQLAGLWQLSEALLDRRRP 193
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + L+ G VC R+P+C +C C
Sbjct: 194 RDFNQALMDLGATVCTPRQPRCGACPWQGHCAAY 227
>gi|255318055|ref|ZP_05359300.1| A/G-specific adenine glycosylase [Acinetobacter radioresistens
SK82]
gi|255304878|gb|EET84050.1| A/G-specific adenine glycosylase [Acinetobacter radioresistens
SK82]
Length = 343
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 76/205 (37%), Gaps = 12/205 (5%)
Query: 32 FSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 10 LLEWFDVHGRHDLPWQVSDDPYKVWVSEIMLQQTQVKTVLQYFDRFIQRFPTVNDLGLAS 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ Y +G Y + + + P +L+G LPGIGR A ++S+
Sbjct: 70 WDEVAPYWAGLGYYARARNLHKAAGIVSREGKF---PDSLDGWIALPGIGRSTAGALMSL 126
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ +D ++ R+ R L+ ++ + + P + ++ ++ G
Sbjct: 127 GLRQYGVIMDGNVKRVLARFFAIEEDLSQPVQERRLWKLAEELCPTERNHDYTQAIMDLG 186
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C +KP C C + C +Q
Sbjct: 187 ATICTPKKPLCLYCPMQEHCLAHQQ 211
>gi|184159947|ref|YP_001848286.1| A/G-specific DNA glycosylase [Acinetobacter baumannii ACICU]
gi|183211541|gb|ACC58939.1| A/G-specific DNA glycosylase [Acinetobacter baumannii ACICU]
Length = 344
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + E T + + ++ Y
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGHATWDEVAPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + P+TLE LPGIGR A ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L+ + ++ + + P + ++ ++ G +C +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMDLGATICTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + C+ +Q
Sbjct: 196 LCLYCPMQAHCQAYQQ 211
>gi|163787184|ref|ZP_02181631.1| putative A/G-specific adenine glycosylase [Flavobacteriales
bacterium ALC-1]
gi|159877072|gb|EDP71129.1| putative A/G-specific adenine glycosylase [Flavobacteriales
bacterium ALC-1]
Length = 346
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 83/206 (40%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + N + + ++ ++ Q+ + + +
Sbjct: 5 KELINWYSIHKRELPWRATQNPYYIWLSEIILQQTQVKQGLPYYNAFVKQYPSVFDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+ + + +G Y ++ N+ + + + NE + + P T + L +L G+G A+ I S
Sbjct: 65 SEESVLKLWQGLGYYS-RARNLHTTAKHIANELNGQFPNTYKDLIKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++F T VD +++R+ +R + + + +I + + ++
Sbjct: 124 ISFNEVTAVVDGNVYRVLSRYFGIATPINSTVGIKEFKALASSLIDTQQPATYNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C C I + C +++
Sbjct: 184 GAKQCKPKNPDCNVCPIKDGCVALQK 209
>gi|110677701|ref|YP_680708.1| A/G-specific adenine glycosylase, putative [Roseobacter
denitrificans OCh 114]
gi|109453817|gb|ABG30022.1| A/G-specific adenine glycosylase, putative [Roseobacter
denitrificans OCh 114]
Length = 355
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 74/190 (38%), Gaps = 6/190 (3%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + + + ++ ++ Q+T V + T + + A + +
Sbjct: 32 PQARRAGQTPDPYRIWLSEVMLQQTTVATVKSYFERFTARWPTVRDLAAAQDADVMAEWA 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N++ + + ++ P L +LPGIG A I S+AF + +
Sbjct: 92 GLGYYA-RARNLLKCARTVDQDYGGTFPADHAELLKLPGIGPYTAAAIASIAFDLRHTVL 150
Query: 157 DTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
D ++ R+ R+ P +E++ + P + ++ G +C + P
Sbjct: 151 DGNVERVMARLHDIHVPLPASKPILMEKAD-ALTPVDRPGDYAQAVMDLGATICTPKSPA 209
Query: 213 CQSCIISNLC 222
C C + C
Sbjct: 210 CGICPWRDPC 219
>gi|312867777|ref|ZP_07727983.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis
F0405]
gi|311096840|gb|EFQ55078.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis
F0405]
Length = 384
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + + + + ++ ++ Q+ V + +
Sbjct: 11 MWEEEKIASFREKLLAWYDAHKRDLPWRRTQDPYKIWISEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++ P + E +++L G
Sbjct: 71 WFPTIADLAQAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMENHGGVFPSSYEAISQLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+ VD ++ R+ R + + + +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLARLFEVDYDIGVPTNRKIFQAIMEILIDPAR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|172038509|ref|YP_001805010.1| mutator protein MutT [Cyanothece sp. ATCC 51142]
gi|171699963|gb|ACB52944.1| mutator protein MutT [Cyanothece sp. ATCC 51142]
Length = 369
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 9/203 (4%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + N + + V+ ++ Q+ V + + T + +
Sbjct: 26 LLTWYQQQGRQLPWRNTRDPYLIWVSEIMLQQTQVKTVLPYYQRWLDTFPTLESLAKAEL 85
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + I++NE++ PQ L + LPGIGR A ILS A
Sbjct: 86 QGVLKAWEGLGYYS-RARNLHKAAQIVLNEYNGVFPQQLSDVLTLPGIGRTTAGGILSAA 144
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
F +D ++ R+ +R+ A P K +SL ++ + P++ + + L+ G
Sbjct: 145 FNQSVSILDGNVKRVLSRLM-ALPVPPKKGLKSLWQLSDLILDPENPRDFNQALMDLGAE 203
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C ++ C +Q
Sbjct: 204 ICVKTKPRCLLCPWTSHCLAYQQ 226
>gi|149035563|gb|EDL90244.1| mutY homolog (E. coli), isoform CRA_a [Rattus norvegicus]
Length = 516
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRRNLLSWYDQEKRDLPWRKRVKEEANLDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 182 LLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLV 241
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 242 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAHQR 282
>gi|259047341|ref|ZP_05737742.1| A/G-specific adenine glycosylase [Granulicatella adiacens ATCC
49175]
gi|259035963|gb|EEW37218.1| A/G-specific adenine glycosylase [Granulicatella adiacens ATCC
49175]
Length = 390
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 84/212 (39%), Gaps = 9/212 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ K+++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 9 KMWDEKKIKRFRRALLDWYDKEKRDLPWRRTQNPYFIWVSEIMLQQTRVDTVIPYYERFL 68
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + E+ L +G Y + N+ + ++ EF + P T +G+ L
Sbjct: 69 ATFPTIKDLAEAPEETLLKCWEGLGYYS-RVRNMQKAAIQVMEEFGGEFPNTYDGILSLK 127
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AFG+P VD ++ R+ +R+ + ++ +I P
Sbjct: 128 GIGPYTAGAIASIAFGLPEPAVDGNLMRVISRLFEVNLDIGNPSNRWAFQEIAEILIDPD 187
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ + + +
Sbjct: 188 RPGDFNQALMDLGSDIESPVNPRPEESPVKDF 219
>gi|219848317|ref|YP_002462750.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
gi|219542576|gb|ACL24314.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
Length = 220
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Query: 25 LEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+E + + L F +++A +LS ++ D LF +AD
Sbjct: 8 IEHVLDTLERELTKYTPPLIDQMGEVSQTPFRILIATILSLRTKDTLTAVVAPRLFAVAD 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP MLA+G ++ I +G YR K+ I ++ IL+ +++ ++P L+ L +LPG+GR
Sbjct: 68 TPAAMLALGVDRIAELIYPVGFYRVKARQIAAICQILLEKYNGEVPSDLDELLKLPGVGR 127
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++++ FG+P I VD H+ RI NR G +TP + E +L +P ++ + L
Sbjct: 128 KTANLVITAGFGLPGICVDVHVHRICNRWGYVQTRTPEETEMALRAKLPQRYWIPINRLL 187
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
V G+ +C P+C C I +LC RI
Sbjct: 188 VTLGQNICHPTSPRCSICPIRDLCPRI 214
>gi|256819817|ref|YP_003141096.1| A/G-specific adenine glycosylase [Capnocytophaga ochracea DSM 7271]
gi|256581400|gb|ACU92535.1| A/G-specific adenine glycosylase [Capnocytophaga ochracea DSM 7271]
Length = 350
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 9/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + + L + N + + ++ ++ Q+ V + T +
Sbjct: 16 LINKLTSWYKVAQRSLPWRGTANPYKVWLSEVILQQTRVVQGLPYYQRFISRYPTVTDLA 75
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ + +G Y +++N+ + + E P+T + L +L GIG A+ I
Sbjct: 76 NAPEEEVLKLWQGLGYYS-RAKNLHHTAQYIATELGGVFPKTYKELVKLKGIGDYTASAI 134
Query: 145 LSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
S + P VD +++R+ +R + + + + + + + L+
Sbjct: 135 ASFCYNEPCAVVDGNVYRVLSRLFGIATPINSPQGAKEFKALAYECLDKHNPGTYNQALM 194
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G C + P C +C++ + C
Sbjct: 195 EFGALQCTPQSPDCANCVLRDHCWAF 220
>gi|127512056|ref|YP_001093253.1| A/G-specific adenine glycosylase [Shewanella loihica PV-4]
gi|126637351|gb|ABO22994.1| A/G-specific DNA-adenine glycosylase [Shewanella loihica PV-4]
Length = 368
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 14/226 (6%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTD 63
L + T E+ + + L + + + V+ ++ Q+
Sbjct: 6 RKTLPLYRLSAMKT----EQFHQRIVTWYDKHGRKHLPWQQDKTPYKVWVSEIMLQQTQV 61
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
V + T + + ++ ++ +G Y ++ N+ + ++ +++D
Sbjct: 62 ATVIPYFEAFMARFPTILDLANADQDEVLHHWTGLGYYA-RARNLHKSAQLIASDYDGVF 120
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSL 182
P E + LPGIGR A +LS++ G +D ++ R+ R G G +VEQ L
Sbjct: 121 PTQFEQVLALPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLARHGAIAGWPGKREVEQQL 180
Query: 183 LRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ P + ++ G +C KP+C+ C ++ CK
Sbjct: 181 WQLTNSLTPKTGVTQYNQAMMDIGASICTRSKPRCELCPVAIDCKA 226
>gi|323519872|gb|ADX94253.1| A/G-specific DNA glycosylase [Acinetobacter baumannii TCDC-AB0715]
Length = 344
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + E T + + ++ Y
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGYATWDEVAPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + P+TLE LPGIGR A ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L+ + ++ + + P + ++ ++ G +C +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMDLGATICTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + C+ +Q
Sbjct: 196 LCLYCPMQAHCQAYQQ 211
>gi|115298650|ref|NP_001041637.1| A/G-specific adenine DNA glycosylase isoform 3 [Homo sapiens]
gi|6691535|dbj|BAA89343.1| hMYHgamma2 [Homo sapiens]
gi|56205984|emb|CAI21714.1| mutY homolog (E. coli) [Homo sapiens]
gi|119627397|gb|EAX06992.1| mutY homolog (E. coli), isoform CRA_b [Homo sapiens]
gi|311347982|gb|ADP90938.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347994|gb|ADP90948.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348000|gb|ADP90953.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348006|gb|ADP90958.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348018|gb|ADP90968.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348024|gb|ADP90973.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348030|gb|ADP90978.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348036|gb|ADP90983.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348042|gb|ADP90988.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348048|gb|ADP90993.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348060|gb|ADP91003.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348066|gb|ADP91008.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348072|gb|ADP91013.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348078|gb|ADP91018.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348084|gb|ADP91023.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348090|gb|ADP91028.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348096|gb|ADP91033.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348102|gb|ADP91038.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348108|gb|ADP91043.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348114|gb|ADP91048.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348120|gb|ADP91053.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348126|gb|ADP91058.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348132|gb|ADP91063.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348138|gb|ADP91068.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348144|gb|ADP91073.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348150|gb|ADP91078.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348156|gb|ADP91083.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348162|gb|ADP91088.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348168|gb|ADP91093.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348174|gb|ADP91098.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348180|gb|ADP91103.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348186|gb|ADP91108.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348192|gb|ADP91113.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348198|gb|ADP91118.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348204|gb|ADP91123.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348216|gb|ADP91133.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 522
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 73 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 132
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 133 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 192
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 193 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 252
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 253 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 284
>gi|121997932|ref|YP_001002719.1| A/G-specific adenine glycosylase [Halorhodospira halophila SL1]
gi|121589337|gb|ABM61917.1| A/G-specific DNA-adenine glycosylase [Halorhodospira halophila SL1]
Length = 358
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 10/216 (4%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
+ TP+ + + + +L + + + ++ ++ Q+ V +
Sbjct: 1 MSRWATPERCQALQEQLIAWQRQHGRNDLPWQQPATPYRVWISEIMLQQTRVETVVPYFE 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + A + +G Y ++ N+ + + + ++ ++P L L
Sbjct: 61 RFMERYPDVAALAAAELDDVLALWAGLGYYA-RARNLHAAAQRIQTDWGGQLPAELSALQ 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPGIG A I S+ G P +D ++ R+ R+ G ++ +
Sbjct: 120 TLPGIGPSTAGAIRSLGHGQPAPILDGNVKRVLARLAGVEGWPGRSPVAKQLWALSAALT 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P + L+ G VC R P C +C ++ C
Sbjct: 180 PEAECRRFNQGLMDLGALVCTPRDPACNACPLAASC 215
>gi|115298652|ref|NP_001041638.1| A/G-specific adenine DNA glycosylase isoform 4 [Homo sapiens]
gi|115298654|ref|NP_001041639.1| A/G-specific adenine DNA glycosylase isoform 4 [Homo sapiens]
gi|6691531|dbj|BAA89341.1| hMYHbeta3 [Homo sapiens]
gi|6691533|dbj|BAA89342.1| hMYHbeta5 [Homo sapiens]
gi|6691537|dbj|BAA89344.1| hMYHgamma3 [Homo sapiens]
gi|56205983|emb|CAI21713.1| mutY homolog (E. coli) [Homo sapiens]
gi|119627398|gb|EAX06993.1| mutY homolog (E. coli), isoform CRA_c [Homo sapiens]
gi|119627401|gb|EAX06996.1| mutY homolog (E. coli), isoform CRA_c [Homo sapiens]
gi|119627402|gb|EAX06997.1| mutY homolog (E. coli), isoform CRA_c [Homo sapiens]
gi|311347981|gb|ADP90937.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347993|gb|ADP90947.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347999|gb|ADP90952.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348005|gb|ADP90957.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348017|gb|ADP90967.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348023|gb|ADP90972.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348029|gb|ADP90977.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348035|gb|ADP90982.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348041|gb|ADP90987.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348047|gb|ADP90992.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348059|gb|ADP91002.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348065|gb|ADP91007.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348071|gb|ADP91012.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348077|gb|ADP91017.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348083|gb|ADP91022.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348089|gb|ADP91027.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348095|gb|ADP91032.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348101|gb|ADP91037.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348107|gb|ADP91042.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348113|gb|ADP91047.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348119|gb|ADP91052.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348125|gb|ADP91057.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348131|gb|ADP91062.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348137|gb|ADP91067.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348143|gb|ADP91072.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348149|gb|ADP91077.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348155|gb|ADP91082.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348161|gb|ADP91087.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348167|gb|ADP91092.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348173|gb|ADP91097.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348179|gb|ADP91102.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348185|gb|ADP91107.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348191|gb|ADP91112.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348197|gb|ADP91117.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348203|gb|ADP91122.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348215|gb|ADP91132.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 521
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 72 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 131
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 132 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 191
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 192 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 251
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 252 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 283
>gi|255513577|gb|EET89843.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 218
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+ + + + L + L+VA +LSAQ+ D VN T LF T +
Sbjct: 10 KKANSVVGMLEEHYKDVHYYLNFSTPIELLVAAILSAQTKDTKVNAITPRLFGKYKTAKD 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+L Y+ + + K NII + ++ K+P +E L LPGIGRK AN
Sbjct: 70 YADAKPAELMGYVGGVLYAKNKVANIIGACKEIDEKYRGKVPDRMEDLVELPGIGRKTAN 129
Query: 143 VILSMAFGIPT-IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
IL A+G I VDT + ++S RIGL+ K + +E+ L I ++ N Y L H
Sbjct: 130 TILINAYGKVEGIPVDTWVIKLSYRIGLSKAKNADSIEKDLEAKISKQYWKNIAYVLKAH 189
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G+ VC A P+C +C I C +
Sbjct: 190 GKEVCGAV-PKCSACPIKAHCPK 211
>gi|253700536|ref|YP_003021725.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
gi|251775386|gb|ACT17967.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
Length = 220
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 103/180 (57%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++V+ +LS ++ D +A++ LF +ADTPQKM + +++ I +G YR K+
Sbjct: 35 RDPYKVLVSCILSLRTRDQTTAEASQRLFALADTPQKMAELSVPEIEQAIYPVGFYRVKA 94
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ I+ LS + + ++P LE L G+GRK AN++L++ +G P I VD H+ RI N
Sbjct: 95 QQILELSFQIRELYQGRVPDELETLLTFKGVGRKTANLVLTLGYGKPGICVDIHVHRICN 154
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R G TP + E +L + +PP++ + LV G+ C P+C +C + LC R+
Sbjct: 155 RWGYVKTGTPEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSNCPLYALCDRV 214
>gi|239993034|ref|ZP_04713558.1| A/G-specific adenine glycosylase [Alteromonas macleodii ATCC 27126]
Length = 355
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 16/215 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + F + L + + + V+ ++ Q+ V K T
Sbjct: 11 AERVLAWFDKH---GRKHLPWQQDVTPYKVWVSEIMLQQTQVTTVIPYFKRFMASFPTVH 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + + ++ +G Y ++ N+ +++L++ ++ + P TLE + LPGIGR A
Sbjct: 68 DLAKASQDDVLHHWTGLGYYA-RARNLHKAANMLVDNYNGEFPYTLEEVMDLPGIGRSTA 126
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--------HQY 192
ILS++ + +D ++ R+ R G KVE L +
Sbjct: 127 GAILSLSRNMRFPILDGNVKRVLARYYAIGGWPGQKKVENQLWEVAEKNTPTNSEGGRCA 186
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
N ++ G +C KP+C C + C Q
Sbjct: 187 NYTQVMMDLGAMICTRSKPKCDECPLQADCIAYAQ 221
>gi|188994720|ref|YP_001928972.1| putative A/G-specific adenine glycosylase [Porphyromonas gingivalis
ATCC 33277]
gi|188594400|dbj|BAG33375.1| putative A/G-specific adenine glycosylase [Porphyromonas gingivalis
ATCC 33277]
Length = 407
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSA 59
SS ++ S S + L EL + L + + + K +L + + + + ++ ++
Sbjct: 30 SSSRTRSLPSESKIDPLPYFPELRK---LLAEWYDANKRDLPWRQTDDPYRIWISEVILQ 86
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ E + E ++ +G Y ++ N+ + +++++F
Sbjct: 87 QTRVEQGRDYYHRFIERFPDVHSLSLASEDEVLKQWEGLGYYS-RARNLHRAARMIVSDF 145
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
IP+T + + +LPGIG A +LS A+ +P VD +IFR+ +R+
Sbjct: 146 GGCIPRTRQEILQLPGIGDYTAAAVLSFAYDLPFAAVDGNIFRVISRLMNLDTPIDTPAG 205
Query: 180 QS-----LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ + + ++ G C P C C + C
Sbjct: 206 KKLFSFWADALLDREAPARHNQAIMEFGALHCTPTSPSCLLCPVRRFC 253
>gi|304319997|ref|YP_003853640.1| putative mutY, A/G-specific adenine glycosylase [Parvularcula
bermudensis HTCC2503]
gi|303298900|gb|ADM08499.1| Putative mutY, A/G-specific adenine glycosylase [Parvularcula
bermudensis HTCC2503]
Length = 352
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 16/208 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V + D
Sbjct: 13 LLEWYDRHARQLPWRISPAASRAGVRPDPYRVWLSEIMLQQTTVATVTPRFAAFVQRWDG 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ +++ +G Y ++ N+ + + ++ D ++P + L LPGIG
Sbjct: 73 FPALAEAPLEEVLGEWAGLGYYS-RARNLHACAKVVTRLHDGQLPASESALKDLPGIGPY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQYNAHY 196
A I ++AF + VD ++ RI R ++P + +
Sbjct: 132 TAAAIAAIAFDRRAVVVDGNVERIMVRQAAIERPIKEAKAAIYALAAEVVPDRRGGDYAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ G +C+ R+P C C + + C+
Sbjct: 192 ALMDLGATICRPRRPDCLLCPVRSSCRA 219
>gi|313123662|ref|YP_004033921.1| endonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280225|gb|ADQ60944.1| Endonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325686231|gb|EGD28275.1| endonuclease III [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 209
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AVLLSAQ+TD VNK T LF
Sbjct: 6 KLLSDEEARNVLKQIDAMFPEAKGELNWDNRFQLLCAVLLSAQTTDKMVNKVTPQLFADF 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ M A +++++ I +G+Y K++++ ++ L+ E+ ++P E L +L G+G
Sbjct: 66 PTPEAMAAASQEEIEADISHLGLYHSKAKHLKEMAQTLVAEYGGQVPGKKEDLVKLAGVG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RI+ + + P K TP +VE+ L ++P + H+
Sbjct: 126 NKTANVVLAEGWGVPAIAVDTHVSRIAKKFKIVPEKATPLQVEKRLEELLPKDEWIHTHH 185
Query: 197 WLVLHGRYVC--KARKPQ 212
++ GRY +A+ P
Sbjct: 186 AMIFFGRYKMPARAKNPD 203
>gi|291548082|emb|CBL21190.1| A/G-specific adenine glycosylase [Ruminococcus sp. SR1/5]
Length = 351
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 10/210 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E I + K L + N + V+ ++ Q+ V + +
Sbjct: 3 ENIAEPLLKWYDKNKRLLPWRDKDNAYYTWVSEIMLQQTRVEAVKPYFQRFIQELPDVAA 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A E+++ +G Y + N+ + ++ E+ +IP+ E L L GIGR A
Sbjct: 63 LAAAPEERIIKLWEGLGYYS-RVRNMQKAAVQVMEEYGGRIPEDFETLLSLKGIGRYTAG 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYW 197
I S+A+G VD ++ R+ R+ G + VE L + + +
Sbjct: 122 AIASIAYGKKVPAVDGNVLRVYARLTENRGDIMKQSVRKSVENDLTEQMSEDRPGDFNQA 181
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
++ G VC +C+ C + + C K
Sbjct: 182 MMELGAVVCVPNGAAKCEECPLGHFCLARK 211
>gi|126736228|ref|ZP_01751971.1| A/G-specific adenine glycosylase [Roseobacter sp. CCS2]
gi|126714394|gb|EBA11262.1| A/G-specific adenine glycosylase [Roseobacter sp. CCS2]
Length = 332
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 73/179 (40%), Gaps = 4/179 (2%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+T V + I T + + A + + +G Y ++
Sbjct: 17 DPYAVWMSEIMLQQTTVAAVRDYHRKFMGIWPTVRDLAAAEDADVMAAWAGLGYYA-RAR 75
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N++ + ++ E+D P+ + L +LPG+G A + ++AF VD ++ R+ R
Sbjct: 76 NLLKCARAVVAEYDGVFPEKYDELLKLPGVGPYTAAAVAAIAFDQSETVVDGNVERVMAR 135
Query: 167 IGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + + P + ++ G +C R P C C + C
Sbjct: 136 LYDIHAPLPGSKGALTAKARELTPQSRPGDYAQAVMDLGATICTPRSPTCGICPWRDHC 194
>gi|332162821|ref|YP_004299398.1| adenine DNA glycosylase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325667051|gb|ADZ43695.1| adenine DNA glycosylase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 380
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 20 QAQQFAHVVLEWYQRVGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 79
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 80 ISALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVEHHQGEFPTTFDEILALPGIGRS 138
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS++ G +D ++ R+ R G K + Q + P K
Sbjct: 139 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKDVEGRLWQISEDVTPAKGVGQF 198
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 199 NQAMMDLGAIVCTRSKPKCELCPLNIGCLAY 229
>gi|254439414|ref|ZP_05052908.1| A/G-specific adenine glycosylase [Octadecabacter antarcticus 307]
gi|198254860|gb|EDY79174.1| A/G-specific adenine glycosylase [Octadecabacter antarcticus 307]
Length = 350
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 16/215 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ +I + E+ + + + + ++ ++ Q+T V
Sbjct: 1 MRDITKALLDWYDVHAREMPWRVMPTMRKAGYLPDPYAVWLSEVMLQQTTVAAVRGYHTR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
T + A + + +G Y ++ N++ + ++ + PQT L
Sbjct: 61 FMAFWPTVGALAAAEDADVMAAWAGLGYYA-RARNLLKCARTVVADHGGAFPQTYVALIE 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPK 189
LPGIG A I ++AF + +D ++ R+ +R+ P + +R
Sbjct: 120 LPGIGPYTAAAISAIAFDEASTVLDGNVERVMSRLYDDHTPLPAAKPVLMDFAMRHTSQI 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C +KP C C + CK
Sbjct: 180 RPGDYAQAVMDLGATICTPKKPACGICPVRGACKA 214
>gi|288575002|ref|ZP_06393359.1| HhH-GPD family protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570743|gb|EFC92300.1| HhH-GPD family protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 238
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 17/236 (7%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY--YVNHFTLIVAVLLS 58
++S K + SPL + L + + W K + + + ++ +LS
Sbjct: 4 LLSEAKDGKFSSTSPL-----ERNLLSVLDVLEELWGQEKNPMVSAFDDPLDGLMLTILS 58
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
+ D N ++A L + + + ++ +L + IR GI K+ ++ + I+ +E
Sbjct: 59 QNTNDNNRDRAFDKLKTLYPLWEDVASVTPDELADAIRVAGIANVKAGRMLDVLKIIHDE 118
Query: 119 ---------FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL 169
L LPG+G K A +L IP VDTH+ R R+
Sbjct: 119 LGEYGLTGLKYRDHDGVRAFLEGLPGVGPKTAACVLVFDMDIPAFPVDTHVARFCRRMEW 178
Query: 170 AP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P TP ++++ + +I+P + + AH ++ HG+ +CKARKP CQ C + +LC
Sbjct: 179 VPRSATPVRIQEYMEKIVPDERKKGAHLNIISHGKSICKARKPICQRCPLIDLCPS 234
>gi|311347988|gb|ADP90943.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348012|gb|ADP90963.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348054|gb|ADP90998.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348210|gb|ADP91128.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 522
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 73 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 132
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 133 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 192
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 193 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 252
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 253 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 284
>gi|190151069|ref|YP_001969594.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307246669|ref|ZP_07528739.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255653|ref|ZP_07537457.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260104|ref|ZP_07541815.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307264433|ref|ZP_07546019.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916200|gb|ACE62452.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306852369|gb|EFM84604.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861330|gb|EFM93320.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865838|gb|EFM97715.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306870249|gb|EFN02007.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 381
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+ + P + + L G+GR A
Sbjct: 78 ADAHIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNGEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE L ++ P + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENKLWQLTASVTPNSQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C ++NLC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLANLCEANR 224
>gi|6691523|dbj|BAA89337.1| hMYHalpha2 [Homo sapiens]
gi|56205990|emb|CAI21720.1| mutY homolog (E. coli) [Homo sapiens]
gi|119627396|gb|EAX06991.1| mutY homolog (E. coli), isoform CRA_a [Homo sapiens]
gi|307685579|dbj|BAJ20720.1| mutY homolog [synthetic construct]
Length = 536
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 87 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 146
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 147 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 206
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 207 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 266
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 267 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 298
>gi|311347987|gb|ADP90942.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348011|gb|ADP90962.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348053|gb|ADP90997.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348209|gb|ADP91127.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 521
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 72 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 131
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 132 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 191
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 192 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 251
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 252 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 283
>gi|56698271|ref|YP_168644.1| A/G-specific adenine glycosylase [Ruegeria pomeroyi DSS-3]
gi|56680008|gb|AAV96674.1| A/G-specific adenine glycosylase [Ruegeria pomeroyi DSS-3]
Length = 351
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 16/211 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ E+ + + + + ++ ++ Q+T V T
Sbjct: 13 LLDWYDRHAREMPWRVGPTDRAAGVRPDPYRVWLSEVMLQQTTVAAVRDYFHRFTARWPT 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N++ + + E + P + EGL LPGIG
Sbjct: 73 VAALAAAPDEAVMGEWAGLGYYA-RARNLLKCARAVSEEHGGQFPDSYEGLIALPGIGPY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A I ++AF +D ++ R+ R+ P +++ + P +
Sbjct: 132 TAAAIAAIAFDRAETVLDGNVERVMARLYDVQEPLPGVKPVLKEHAAALTPTARPGDHAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C R P C C + C ++
Sbjct: 192 AVMDLGATICTPRAPACGICPLRAPCLARQR 222
>gi|53804983|ref|YP_113351.1| A/G-specific adenine glycosylase [Methylococcus capsulatus str.
Bath]
gi|53758744|gb|AAU93035.1| A/G-specific adenine glycosylase [Methylococcus capsulatus str.
Bath]
Length = 353
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 9/198 (4%)
Query: 38 SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+ +L + + + ++ ++ Q+ V + + ++
Sbjct: 20 EGRHDLPWQRPRTPYRVWISEVMLQQTQVATVIGYFERFMRHFPRLAVLAEADLDEVLAL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+G Y ++ N+ + I+ ++P LT LPGIGR A I S+ F
Sbjct: 80 WSGLGYYS-RARNLHRTARIVTERHAGELPADPAVLTTLPGIGRSTAGAISSLGFDRRAA 138
Query: 155 GVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKAR 209
+D ++ R+ R G +KVE+ L R+ P + + ++ G VC
Sbjct: 139 ILDGNVRRVLARCHGVEGWPGASKVEKELWRLSEELTPSTRCADYNQAMMDLGATVCTRS 198
Query: 210 KPQCQSCIISNLCKRIKQ 227
+P C C ++ C +Q
Sbjct: 199 RPACADCPLAGTCVARRQ 216
>gi|115298648|ref|NP_001041636.1| A/G-specific adenine DNA glycosylase isoform 2 [Homo sapiens]
gi|1458228|gb|AAC50618.1| mutY homolog [Homo sapiens]
gi|6691525|dbj|BAA89338.1| hMYHalpha3 [Homo sapiens]
gi|13112009|gb|AAH03178.1| MutY homolog (E. coli) [Homo sapiens]
gi|56205988|emb|CAI21718.1| mutY homolog (E. coli) [Homo sapiens]
gi|119627399|gb|EAX06994.1| mutY homolog (E. coli), isoform CRA_d [Homo sapiens]
gi|311347978|gb|ADP90934.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347990|gb|ADP90944.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347996|gb|ADP90949.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348002|gb|ADP90954.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348014|gb|ADP90964.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348020|gb|ADP90969.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348026|gb|ADP90974.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348032|gb|ADP90979.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348038|gb|ADP90984.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348044|gb|ADP90989.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348056|gb|ADP90999.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348062|gb|ADP91004.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348068|gb|ADP91009.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348074|gb|ADP91014.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348080|gb|ADP91019.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348086|gb|ADP91024.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348092|gb|ADP91029.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348098|gb|ADP91034.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348104|gb|ADP91039.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348110|gb|ADP91044.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348116|gb|ADP91049.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348122|gb|ADP91054.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348128|gb|ADP91059.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348134|gb|ADP91064.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348140|gb|ADP91069.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348146|gb|ADP91074.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348152|gb|ADP91079.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348158|gb|ADP91084.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348164|gb|ADP91089.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348170|gb|ADP91094.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348176|gb|ADP91099.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348182|gb|ADP91104.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348188|gb|ADP91109.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348194|gb|ADP91114.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348200|gb|ADP91119.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348212|gb|ADP91129.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 535
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 86 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 145
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 146 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 205
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 206 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 265
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 266 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 297
>gi|85703948|ref|ZP_01035051.1| A/G-specific adenine glycosylase [Roseovarius sp. 217]
gi|85671268|gb|EAQ26126.1| A/G-specific adenine glycosylase [Roseovarius sp. 217]
Length = 353
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 80/212 (37%), Gaps = 16/212 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + +L + + + + ++ ++ Q+T V + +
Sbjct: 8 QTLLAWYDTHARDLPWRVSPTARSAGICPDPYRIWLSEVMLQQTTVAAVREYFIRFITLW 67
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + ++ +G Y ++ N++ + ++ + P T+E L LPGIG
Sbjct: 68 PTVADLAAAQDGQVMGEWAGLGYYA-RARNLLKCARAVVTDHQGHFPATVEELRALPGIG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ---SLLRIIPPKHQYNA 194
A I ++A+ P + VD ++ R+ R+ P + + R+ P +
Sbjct: 127 PYTAAAIAAIAYDRPAVVVDGNVERVMARLYDIHTPLPTAKRELTEAAARLTPQTRPGDY 186
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G VC + P C C C K
Sbjct: 187 AQAVMDLGATVCTPKSPACGICPWVTACAARK 218
>gi|318604338|emb|CBY25836.1| A/G-specific adenine glycosylase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 380
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 79/215 (36%), Gaps = 7/215 (3%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ + + ++ + + ++ ++ Q+ V +
Sbjct: 16 PLMMQAQQFAHVVLEWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFML 75
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A ++ + +G Y ++ N+ + ++ + P T + + LPG
Sbjct: 76 RFPDISALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVEHHQGEFPTTFDEILALPG 134
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
IGR A ILS++ G +D ++ R+ R G K + Q + P K
Sbjct: 135 IGRSTAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKDVEGRLWQISEDVTPAKG 194
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 195 VGQFNQAMMDLGAIVCTRSKPKCELCPLNIGCLAY 229
>gi|46143247|ref|ZP_00135609.2| COG1194: A/G-specific DNA glycosylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209203|ref|YP_001054428.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
L20]
gi|126097995|gb|ABN74823.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 381
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+ + P + + L G+GR A
Sbjct: 78 ADAHIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNGEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE L ++ P + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENKLWQLTASVTPNSQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C ++NLC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLANLCEANR 224
>gi|310825804|ref|YP_003958161.1| A/G-specific adenine glycosylase [Eubacterium limosum KIST612]
gi|308737538|gb|ADO35198.1| A/G-specific adenine glycosylase [Eubacterium limosum KIST612]
Length = 362
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 84/213 (39%), Gaps = 9/213 (4%)
Query: 23 KELEEIFYL-FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
KE IF + K L + + + ++ +++ Q+ + E
Sbjct: 10 KETARIFATNLLQWFYKSKRALPFRETKKPYNIWISEIMAQQTQIDTLIPYYHRFVEAFP 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ E K+ +G Y +++N+ + I+ E++ P + L +LPGIG
Sbjct: 70 DVTALAEAPEDKVLKLWEGLGYYS-RAKNLHKAAKIIHEEYNGIFPDHYDALIKLPGIGP 128
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP---PKHQYNA 194
I S+AF +D ++ R+ +R G KV+ ++ + P +
Sbjct: 129 YTGGAIASIAFKEKVPAIDGNVLRVISRFNNYNGDIANVKVKNAITDWVAQALPDTPGDF 188
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G VC P+C C N+C+ ++
Sbjct: 189 NEGLMELGALVCTPTNPKCMICPEQNICEAFRE 221
>gi|224534496|ref|ZP_03675072.1| endonuclease III [Borrelia spielmanii A14S]
gi|224514173|gb|EEF84491.1| endonuclease III [Borrelia spielmanii A14S]
Length = 211
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 104/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYGNFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NII+ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIINCSIDILEKFNGIIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L + I P QY + HGR +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLENSPIKIELDLKKRIEPCKQYRFSMAINKHGREICTSRNVNCS 199
Query: 215 SCIISNLCKRI 225
C + R+
Sbjct: 200 DCFLEKFAPRV 210
>gi|315613223|ref|ZP_07888133.1| A/G-specific adenine glycosylase [Streptococcus sanguinis ATCC
49296]
gi|315314785|gb|EFU62827.1| A/G-specific adenine glycosylase [Streptococcus sanguinis ATCC
49296]
Length = 386
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMADFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I PK
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGVPSNRKIFQAMMEILIDPK 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|156932549|ref|YP_001436465.1| adenine DNA glycosylase [Cronobacter sakazakii ATCC BAA-894]
gi|156530803|gb|ABU75629.1| hypothetical protein ESA_00330 [Cronobacter sakazakii ATCC BAA-894]
Length = 361
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFSRQVLDWYDKYGRKTLPWQQEKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N+ + + K P+T E + LPG+GR
Sbjct: 63 VTALANAPLDDVLHLWTGLGYYA-RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A +LS++ G +D ++ R+ R G +VE L +I P +
Sbjct: 122 TAGAVLSLSLGKHFPILDGNVKRVLARCYAVEGWPGKKEVENRLWQISETVTPAEGVARF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++N C+
Sbjct: 182 NQAMMDLGAMVCTRSKPKCEICPLNNGCEAF 212
>gi|85710083|ref|ZP_01041148.1| Endonuclease III/Nth [Erythrobacter sp. NAP1]
gi|85688793|gb|EAQ28797.1| Endonuclease III/Nth [Erythrobacter sp. NAP1]
Length = 217
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPS----PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ ++EE++ + P KG + F ++ +LSAQS D N ATK LF
Sbjct: 1 MLNEAQVEEVYRNLADAMPGRTKGAKGPKGQPDAFRSCISCMLSAQSLDRNTAAATKALF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
++A TP MLA+ ++ + I+ G+Y K++NI LI E D +P T EGL LP
Sbjct: 61 KLAKTPADMLALNDEAIAKAIKPCGLYNNKTKNIRKFCTALIEEHDGVVPDTREGLMSLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GIGRK A++++S FG I VDTH+ R+ NRIGL KT K Q L P +
Sbjct: 121 GIGRKCADIVMSFTFGKDVIAVDTHVHRVCNRIGLTDAKTAEKTAQQLEERSPEWALADG 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCK 223
H+WL+ G+ VC++R P+C C++S+LC+
Sbjct: 181 HFWLIQFGKRVCRSRIPKCDICVVSDLCE 209
>gi|153001566|ref|YP_001367247.1| A/G-specific adenine glycosylase [Shewanella baltica OS185]
gi|151366184|gb|ABS09184.1| A/G-specific adenine glycosylase [Shewanella baltica OS185]
Length = 363
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K VE L ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEAQLWQLTDTYTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|119627406|gb|EAX07001.1| mutY homolog (E. coli), isoform CRA_h [Homo sapiens]
Length = 489
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 83 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 142
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 143 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 202
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 203 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 262
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 263 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 294
>gi|322509863|gb|ADX05317.1| A/G specific adenine glycosylase [Acinetobacter baumannii 1656-2]
Length = 227
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + E T + + ++ Y
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFPTVEALGHATWDEVAPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + P+TLE LPGIGR A ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAGLVAQQGKF---PETLEEWIALPGIGRSTAGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L+ + ++ + + P + ++ ++ G +C +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQAIMDLGATICTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + C+ +Q
Sbjct: 196 LCLYCPMQAHCQAYQQ 211
>gi|163791460|ref|ZP_02185868.1| A/G-specific adenine glycosylase-like protein [Carnobacterium sp.
AT7]
gi|159873273|gb|EDP67369.1| A/G-specific adenine glycosylase-like protein [Carnobacterium sp.
AT7]
Length = 402
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 86/217 (39%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++E + K +L + + + + V+ ++ Q+ V +
Sbjct: 20 PMWPQEKIERFRETLLSWYDLEKRDLPWRKNNDPYRIWVSEIMLQQTRVDTVIPYYLNFM 79
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E L +G Y + N+ + + ++ +D ++P + +T+L
Sbjct: 80 KTFPTIEALAHADEDTLLKAWEGLGYYS-RVRNLQTAAQQIMETYDGEMPSDPKEITKLK 138
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPK 189
GIG I SMAFG+P VD ++ R+ +R+ +A E + +I P
Sbjct: 139 GIGPYTTGAIASMAFGLPEPAVDGNVMRVLSRLFEIDADIAKPGNRKIFEAIMRELIDPY 198
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + + G +C + + I + +
Sbjct: 199 KPGDFNQAFMDLGSSICTPKNYHPELSPIKEFNQSYQ 235
>gi|6691529|dbj|BAA89340.1| hMYHbeta1 [Homo sapiens]
gi|119627404|gb|EAX06999.1| mutY homolog (E. coli), isoform CRA_g [Homo sapiens]
Length = 532
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 83 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 142
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 143 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 202
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 203 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 262
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 263 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 294
>gi|260887177|ref|ZP_05898440.1| A/G-specific adenine glycosylase [Selenomonas sputigena ATCC 35185]
gi|330839056|ref|YP_004413636.1| A/G-specific adenine glycosylase [Selenomonas sputigena ATCC 35185]
gi|260863239|gb|EEX77739.1| A/G-specific adenine glycosylase [Selenomonas sputigena ATCC 35185]
gi|329746820|gb|AEC00177.1| A/G-specific adenine glycosylase [Selenomonas sputigena ATCC 35185]
Length = 404
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVN 67
L + L+EI + S K L + + + V+ ++ Q+ V
Sbjct: 2 AKRPQENILKNIETLDEIAEPLLRWFHSEKRALPWREEPTPYRVWVSEIMLQQTRVEAVK 61
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ + + E L +G Y ++ ++ S + ++ ++ +IP
Sbjct: 62 PYFERFVAALPDVRALARADENTLMKLWEGLGYYS-RARHLQSAARLICSDHGGEIPAHF 120
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSL 182
+GL LPGIGR A + S+AFG VD ++ R+ R+ P + VE++L
Sbjct: 121 DGLLALPGIGRYTAGAVASIAFGERRPAVDGNVLRVIMRLLACPADILKESTKRAVEEAL 180
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLC 222
+ +P + N + L+ G +C R C SC + LC
Sbjct: 181 IARLP-EDAGNFNQALMELGALICLPRGAAHCPSCPLERLC 220
>gi|55981867|ref|YP_145164.1| A/G-specific adenine glycosylase MutY [Thermus thermophilus HB8]
gi|55773280|dbj|BAD71721.1| A/G-specific adenine glycosylase (MutY) [Thermus thermophilus HB8]
Length = 325
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 10/203 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + L + + + ++V+ +L Q+ + E T +
Sbjct: 1 MEAWRKALLAWYRENARPLPWRGEKDPYRVLVSEVLLQQTRVEQALPYYRRFLERFPTLK 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A +++ + G YR+ + P + L LPG+G A
Sbjct: 61 ALAAASLEEVLRVWQGAGYYRRAEHLHRLARSVEEL------PPSFAELRGLPGLGPYTA 114
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-HQYNAHYWLVL 200
+ S+AFG VD ++ R+ +R+ ++ ++P + L+
Sbjct: 115 AAVASIAFGERVAAVDGNVRRVLSRLFARESPKEKELFALAQGLLPEGVDPGVWNQALME 174
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G VC ++P+C +C + C+
Sbjct: 175 LGATVCLPKRPRCGACPLGAFCR 197
>gi|114556221|ref|XP_001155517.1| PREDICTED: A/G-specific adenine DNA glycosylase isoform 4 [Pan
troglodytes]
gi|114556223|ref|XP_001155650.1| PREDICTED: A/G-specific adenine DNA glycosylase isoform 6 [Pan
troglodytes]
gi|114556225|ref|XP_001155712.1| PREDICTED: A/G-specific adenine DNA glycosylase isoform 7 [Pan
troglodytes]
Length = 521
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 72 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 131
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 132 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 191
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 192 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 251
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 252 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 283
>gi|195977484|ref|YP_002122728.1| A/G-specific adenine glycosylase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225869199|ref|YP_002745147.1| A/G-specific adenine glycosylase [Streptococcus equi subsp.
zooepidemicus]
gi|195974189|gb|ACG61715.1| A/G-specific adenine glycosylase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225702475|emb|CAX00383.1| putative A/G-specific adenine glycosylase [Streptococcus equi
subsp. zooepidemicus]
Length = 382
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + + + + V+ ++ Q+ V V + +
Sbjct: 11 MWDQDTIASFRRTLLAWYDQEKRDLPWRRTKDPYHIWVSEIMLQQTQVVTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + ++ +F P + +T+L G
Sbjct: 71 WFPTVEALACADEERLLKAWEGLGYYS-RVRNMQKAAQQIMTDFGGIFPSSHADITKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ R + K + + +I P
Sbjct: 130 IGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEIDYDIGDPKNRKIFQAVMEVLIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + A+ P+ + C +
Sbjct: 190 PGDFNQALMDLGTDIEAAKNPRPDESPVRFFCAAYR 225
>gi|262091897|gb|ACY25446.1| putative A/G-specific DNA glycosylase [uncultured microorganism]
Length = 317
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 10/220 (4%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVN 67
+ + L TP+ L I + + + + +VA + + Q+ V
Sbjct: 5 EAEARLPRALTPQRLGAIRRRLLRWYDGHAQPFPWRSARDPYAALVAAVCAQQTQMSRVL 64
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
T + A + + G R+ + + ++ +IP T
Sbjct: 65 TIYDRWIASFPTIADLAAASDADVLRVWDRAGYPRRAL-YLRRAAIRVMEHHQGRIPSTE 123
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-----SNRIGLAPGKTPNKVEQSL 182
L LPG+G A ++ FGI + VDT++ R+ + A ++ +
Sbjct: 124 AQLLDLPGVGPFTAAIVQCFGFGIDSAAVDTNVVRLLGRLLYGDLQPARETPVAQIRWAA 183
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
R++P + ++ G VC P+C C ++ LC
Sbjct: 184 ARLMPAARPLAWNPAVMDFGAMVCAP-TPKCDVCPLATLC 222
>gi|311347984|gb|ADP90939.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348008|gb|ADP90959.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348050|gb|ADP90994.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348206|gb|ADP91124.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 535
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 86 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 145
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 146 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 205
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 206 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 265
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 266 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 297
>gi|254562353|ref|YP_003069448.1| A/G-specific adenine glycosylase [Methylobacterium extorquens DM4]
gi|254269631|emb|CAX25602.1| A/G-specific adenine glycosylase [Methylobacterium extorquens DM4]
Length = 404
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + + +
Sbjct: 9 LLTWYDRHRRALPWRALPGETPDPYRVWLSEVMLQQTTVTAVKPYFEKFLTLFPNVATLA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + + P T +GL +LPGIG A I
Sbjct: 69 AAPEEAVMSAWAGLGYYSRARNLH---ACAKSVASAGGFPDTEDGLRKLPGIGAYTAGAI 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + + L+
Sbjct: 126 AAIAFDRPAAAVDGNVERVMSRLHAIETPLPAARAQIRLFTQALVPDRRPGDFAQALMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 186 GATLCTPKRPACALCPWMLPCRARAE 211
>gi|307262233|ref|ZP_07543883.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306868107|gb|EFM99933.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 381
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+ + P + + L G+GR A
Sbjct: 78 ADAHIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNGEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE L ++ P + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENKLWQLTASVTPNSQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C ++NLC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLANLCEANR 224
>gi|6912520|ref|NP_036354.1| A/G-specific adenine DNA glycosylase isoform 1 [Homo sapiens]
gi|48428272|sp|Q9UIF7|MUTYH_HUMAN RecName: Full=A/G-specific adenine DNA glycosylase; AltName:
Full=MutY homolog; Short=hMYH
gi|21902514|gb|AAM78555.1|AF527839_1 mutY homolog [Homo sapiens]
gi|6691521|dbj|BAA89336.1| hMYHalpha1 [Homo sapiens]
gi|56205989|emb|CAI21719.1| mutY homolog (E. coli) [Homo sapiens]
gi|119627400|gb|EAX06995.1| mutY homolog (E. coli), isoform CRA_e [Homo sapiens]
gi|311347979|gb|ADP90935.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347991|gb|ADP90945.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347997|gb|ADP90950.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348003|gb|ADP90955.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348015|gb|ADP90965.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348021|gb|ADP90970.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348027|gb|ADP90975.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348033|gb|ADP90980.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348039|gb|ADP90985.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348045|gb|ADP90990.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348057|gb|ADP91000.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348063|gb|ADP91005.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348069|gb|ADP91010.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348075|gb|ADP91015.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348081|gb|ADP91020.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348087|gb|ADP91025.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348093|gb|ADP91030.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348099|gb|ADP91035.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348105|gb|ADP91040.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348111|gb|ADP91045.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348117|gb|ADP91050.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348123|gb|ADP91055.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348129|gb|ADP91060.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348135|gb|ADP91065.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348141|gb|ADP91070.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348147|gb|ADP91075.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348153|gb|ADP91080.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348159|gb|ADP91085.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348165|gb|ADP91090.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348171|gb|ADP91095.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348177|gb|ADP91100.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348183|gb|ADP91105.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348189|gb|ADP91110.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348195|gb|ADP91115.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348201|gb|ADP91120.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348213|gb|ADP91130.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 546
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 97 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 156
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 157 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 216
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 217 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 276
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 277 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 308
>gi|332808828|ref|XP_001155582.2| PREDICTED: A/G-specific adenine DNA glycosylase isoform 5 [Pan
troglodytes]
Length = 535
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 86 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 145
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 146 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 205
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 206 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 265
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 266 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 297
>gi|165977176|ref|YP_001652769.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307251036|ref|ZP_07532960.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|165877277|gb|ABY70325.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306856866|gb|EFM88998.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 381
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+ + P + + L G+GR A
Sbjct: 78 ADAHIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNGEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE L ++ P + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENKLWQLTASVTPNSQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C ++NLC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLANLCEANR 224
>gi|332826703|gb|EGJ99525.1| hypothetical protein HMPREF9455_04121 [Dysgonomonas gadei ATCC
BAA-286]
Length = 353
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + + K +L + + + + ++ ++ Q+ +
Sbjct: 1 MSKEKDLRLSSILIRWYNRNKRDLPWRDTTDPYIIWISEIILQQTRVDQGYAYFTRFVKR 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + E ++ + +G Y ++ N+ + + I++ ++ PQ + + G+
Sbjct: 61 FPSVDLLAQAEEDEVLKLWQGLGYYS-RARNLHAAAKIVLEKYQGVFPQDYTDVLSMKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
G A I+S A+ P VD ++FR+ +RI Q ++ K
Sbjct: 120 GEYTAAAIVSFAYDQPHAVVDGNVFRVLSRIFAVEEPIDSTKGKKLFSQLAQELLDDKRA 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C P C SC S +C Q
Sbjct: 180 GLHNQAIMEFGALQCVPVSPDCNSCPASVMCLAYAQ 215
>gi|332808833|ref|XP_003308119.1| PREDICTED: A/G-specific adenine DNA glycosylase [Pan troglodytes]
Length = 532
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 83 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 142
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 143 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 202
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 203 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 262
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 263 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 294
>gi|253578486|ref|ZP_04855758.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850804|gb|EES78762.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 352
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
LEEI + K L + N + V+ ++ Q+ V + Q
Sbjct: 3 LEEIVQPLVKWYRDNKRILPWRDKDNAYYTWVSEIMLQQTRVEAVKPYFQRFITELPDIQ 62
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL +G Y + N+ + + +E++ ++P+ + L L GIG A
Sbjct: 63 SLAECPEEKLLKLWEGLGYYN-RVRNMQEAAKTVKDEYNGRLPEDYQALLSLKGIGSYTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+G VD ++ R+ +RI ++ K+EQ + +I+P + +
Sbjct: 122 GAIASIAYGEKVPAVDGNVLRVISRITESTEDISRQSVRRKIEQQVSQIMPSDCPGDFNQ 181
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
L+ G +C + +C C I+ C +
Sbjct: 182 ALMELGAVICVPNGQAKCAECPIAFTCLAHR 212
>gi|56205985|emb|CAI21715.1| mutY homolog (E. coli) [Homo sapiens]
Length = 291
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 16/209 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 83 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 142
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 143 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 202
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 203 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 262
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ G VC ++P C C + +LC+
Sbjct: 263 QAAMELGATVCTPQRPLCSQCPVESLCRA 291
>gi|170023069|ref|YP_001719574.1| adenine DNA glycosylase [Yersinia pseudotuberculosis YPIII]
gi|169749603|gb|ACA67121.1| A/G-specific adenine glycosylase [Yersinia pseudotuberculosis
YPIII]
Length = 419
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 81/214 (37%), Gaps = 7/214 (3%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + + + + ++ ++ Q+ V +
Sbjct: 47 LMMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLR 106
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
Q + A ++ + +G Y ++ N+ + +++ + P T + + LPGI
Sbjct: 107 FPDIQALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGI 165
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQ 191
GR A ILS++ G +D ++ R+ R G +VE L +I P
Sbjct: 166 GRSTAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVESRLWQISEDVTPANRV 225
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 226 GQFNQAMMDLGAMVCTRSKPKCELCPLNIGCMAY 259
>gi|311347985|gb|ADP90940.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348009|gb|ADP90960.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348051|gb|ADP90995.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348207|gb|ADP91125.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 546
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 97 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 156
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 157 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 216
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 217 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 276
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 277 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 308
>gi|50086555|ref|YP_048065.1| A/G specific adenine glycosylase [Acinetobacter sp. ADP1]
gi|49532529|emb|CAG70243.1| A/G specific adenine glycosylase [Acinetobacter sp. ADP1]
Length = 344
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + + V+ ++ Q+ V + T +
Sbjct: 8 DALLDWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMARFPTVADLGT 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + Y +G Y + + + + N P+TLE LPGIGR A ++
Sbjct: 68 ATWEDVAPYWAGLGYYARARNLHKAAAIVKQNGQ---FPETLEQWIALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ +R L+ ++ + P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLSRFFAIEDDLSKPIHERELWALAENLCPVERNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +KP C C + CK +Q
Sbjct: 185 LGATICTPKKPLCLYCPMQQHCKAHQQ 211
>gi|320547494|ref|ZP_08041780.1| A/G-specific adenine glycosylase [Streptococcus equinus ATCC 9812]
gi|320447839|gb|EFW88596.1| A/G-specific adenine glycosylase [Streptococcus equinus ATCC 9812]
Length = 381
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + ++ ++ Q+ V V + +
Sbjct: 11 MWDAEKIASFRRTLLNWYDNKKRDLPWRRTKNPYHIWISEIMLQQTQVVTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E+K+ +G Y + N+ + ++ F P + + L G
Sbjct: 71 CFPTIESLANAPEEKILKAWEGLGYYS-RVRNMQKAAQEIMENFGGVFPDNHKDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAIASIAFGLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|112702912|emb|CAL34131.1| A/G-specific adenine glycosylase [Cronobacter sakazakii]
Length = 361
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFSRQVLDWYDKYGRKTLPWQQEKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N+ + + K P+T E + LPG+GR
Sbjct: 63 VTALANAPLDDVLHLWTGLGYYA-RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A +LS++ G +D ++ R+ R G +VE L +I P +
Sbjct: 122 TAGAVLSLSLGKHFPILDGNVKRVLARCYAVEGWPGKKEVENRLWQISETVTPTEGVARF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++N C+
Sbjct: 182 NQAMMDLGAMVCTRSKPKCEICPLNNGCEAF 212
>gi|260599350|ref|YP_003211921.1| adenine DNA glycosylase [Cronobacter turicensis z3032]
gi|260218527|emb|CBA33731.1| A/G-specific adenine glycosylase [Cronobacter turicensis z3032]
Length = 361
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFSRQVLDWYDKYGRKTLPWQQEKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N+ + + P+T E + LPG+GR
Sbjct: 63 VTALANAPLDDVLHLWTGLGYYA-RARNLHKAAQQVATLHGGAFPETFEEVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A +LS++ G +D ++ R+ R G +VE L +I P +
Sbjct: 122 TAGAVLSLSLGKHFPILDGNVKRVLARCYAVEGWPGKKEVENRLWQISERVTPAEGVARF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++N C+
Sbjct: 182 NQAMMDLGAMVCTRSKPKCEICPLNNGCEAF 212
>gi|332292026|ref|YP_004430635.1| A/G-specific adenine glycosylase [Krokinobacter diaphorus 4H-3-7-5]
gi|332170112|gb|AEE19367.1| A/G-specific adenine glycosylase [Krokinobacter diaphorus 4H-3-7-5]
Length = 351
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K ++ + N + + ++ ++ Q+ + T Q +
Sbjct: 5 NKLIAWYLEHKRDMPWRNTKDPYKIWLSEIILQQTRVAQGLPYYLAFTKSFPTVQDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ + +G Y + N+ + + I++NE P T E + +L G+G A+ I S
Sbjct: 65 TEEEVLKLWQGLGYYS-RGRNLHASAQIIVNEHGGVFPNTYEEIKKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++F PT VD +++R+ +R+ + + + +I K + + ++
Sbjct: 124 ISFNEPTAVVDGNVYRVLSRVYGIDTPINSTPGIKEFKALAQELIDVKRPADFNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C CI ++ C +++
Sbjct: 184 GAIQCKPQNPYCLHCIYNDKCVALQK 209
>gi|87301683|ref|ZP_01084523.1| probable adenine glycosylase [Synechococcus sp. WH 5701]
gi|87283900|gb|EAQ75854.1| probable adenine glycosylase [Synechococcus sp. WH 5701]
Length = 384
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 9/197 (4%)
Query: 34 LKWPSPKGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
P L F + A ++ Q+ + + + + ++++
Sbjct: 30 KLRPDGSEPLDGEPLCPFRIWTAEVMLQQTQLAVMRPYWERWMLAFPSVDALAEASQQQV 89
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y + + + + P LEG LPGIGR A ILS A
Sbjct: 90 LLLWQGLGYYSRARRMHQAAGRLAAQGW----PGDLEGWLALPGIGRSTAGSILSSALDR 145
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
P +D ++ R+ R+ P + + ++ + + L+ G VC
Sbjct: 146 PCPILDGNVRRVLARLLAWPQPPQRSLAQFWRWSEELLDVQRPRVFNQALMDLGATVCTP 205
Query: 209 RKPQCQSCIISNLCKRI 225
R+P+C C C
Sbjct: 206 RRPRCGECPWRPHCAAY 222
>gi|282880126|ref|ZP_06288846.1| A/G-specific adenine glycosylase [Prevotella timonensis CRIS 5C-B1]
gi|281305999|gb|EFA98039.1| A/G-specific adenine glycosylase [Prevotella timonensis CRIS 5C-B1]
Length = 344
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 76/203 (37%), Gaps = 11/203 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ + + + + A +
Sbjct: 20 LLKWFEEYGRSLPWRETTDPYAIWLSEIILQQTRVQQGWEYWERFMHRFPHVEDLAAATQ 79
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ + L + G+G A I S+A
Sbjct: 80 DEVLRLWQGLGYYSRARHLHEAAKQVVALGHFPCT---MSELKAMKGVGDYTAAAIGSIA 136
Query: 149 FGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSL----LRIIPPKHQYNAHYWLVLHGR 203
FG+P VD +++R+ +R ++ + ++ ++P + ++ G
Sbjct: 137 FGLPVAVVDGNVYRVLSRYFGISTPINTTEGQKEFVDLAQSLLPTSAPSAYNQAIMDFGA 196
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
C P+C C +++ C+ ++
Sbjct: 197 IQCTPTSPRCLICPLADSCEALR 219
>gi|254428977|ref|ZP_05042684.1| A/G-specific adenine glycosylase [Alcanivorax sp. DG881]
gi|196195146|gb|EDX90105.1| A/G-specific adenine glycosylase [Alcanivorax sp. DG881]
Length = 358
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 81/202 (40%), Gaps = 10/202 (4%)
Query: 32 FSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + + V+ ++ Q+ V + + +
Sbjct: 15 LLDWYDQHGRQDLPWQHPRTPYQVWVSEIMLQQTQVSTVIPYFERFMARFPDVKTLALAE 74
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ + +G Y ++ N+ + L+ + + P T+E + LPGIG A IL+
Sbjct: 75 QDEVLHLWTGLGYYA-RARNLHKCAQQLLENYQGEFPDTVEEVATLPGIGPSTAGAILAQ 133
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLHG 202
+ G+ +D ++ R+ R+ PG K VE L + P + ++ G
Sbjct: 134 SRGVRAPILDGNVKRVLARLHAVPGWPGKKPVESRLWELSEHYTPHARLADYTQAIMDLG 193
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
+C+ P C SC ++ C+
Sbjct: 194 ATLCRRGNPDCASCPVNRGCEA 215
>gi|85714256|ref|ZP_01045244.1| A/G-specific adenine glycosylase MutY [Nitrobacter sp. Nb-311A]
gi|85698703|gb|EAQ36572.1| A/G-specific adenine glycosylase MutY [Nitrobacter sp. Nb-311A]
Length = 383
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 26/218 (11%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 6 ARLLEWYDRNRRRLPWRVLPGETVDPYRIWLSEIMLQQTTVKAVGPYFEKFLARWPDVES 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
M + +G Y ++ N+ + + ++ + + P T EGL LPGIG A
Sbjct: 66 MGRASLDDILRMWAGLGYYS-RARNLHACAAKVLRDHGGRFPDTEEGLRALPGIGPYTAA 124
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIP------------ 187
I ++AF T+ VD +I R+ R+ P ++ ++
Sbjct: 125 AIAAIAFNRRTMPVDGNIERVVTRLFAMDEPLPKAKPHIQALAATLLDGCRAGRDGKSRA 184
Query: 188 ---PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G +C +KP C C +++ C
Sbjct: 185 GDVKTRAGDIAQALMDLGAAICTPKKPGCVLCPLNDDC 222
>gi|322376762|ref|ZP_08051255.1| A/G-specific adenine glycosylase [Streptococcus sp. M334]
gi|321282569|gb|EFX59576.1| A/G-specific adenine glycosylase [Streptococcus sp. M334]
Length = 391
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPKEKIVSFREKLLIWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMADFGGRFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|90417411|ref|ZP_01225335.1| adenine glycosylase [marine gamma proteobacterium HTCC2207]
gi|90330745|gb|EAS46020.1| adenine glycosylase [marine gamma proteobacterium HTCC2207]
Length = 350
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 78/214 (36%), Gaps = 7/214 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN-HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P + ++ + ++ + + V+ ++ Q+ V + +
Sbjct: 1 MRPAQFQKAVLDWFDQYGRTNLPWQQDTGAYPVWVSEIMLQQTQVSTVIPYFERFMQSFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + + ++ +G Y ++ N+ + ++ E D + P + L LPGIGR
Sbjct: 61 TVHDLASAPLDNVLHHWTGLGYYA-RARNLHKTAQHVVTELDGQFPDNVTQLIELPGIGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK--VEQSL---LRIIPPKHQYN 193
A I S+AF +D ++ R+ R G + VEQ P +
Sbjct: 120 STAGAISSIAFKNQASILDGNVKRVLARFSATEGWPGKREVVEQLWLIAETFTPLDRIAD 179
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C P C C + C KQ
Sbjct: 180 YTQAMMDLGATLCTRSSPNCSECPLMGNCIAYKQ 213
>gi|170744952|ref|YP_001773607.1| A/G-specific adenine glycosylase [Methylobacterium sp. 4-46]
gi|168199226|gb|ACA21173.1| A/G-specific adenine glycosylase [Methylobacterium sp. 4-46]
Length = 405
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + L + + + + ++ ++ Q+T V E T +
Sbjct: 16 LLVWYDRHRRTLPWRAAPGSVPDPYRVWLSEIMLQQTTVAAVKPYFARFLERFPTVAALA 75
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + P T+EGL RLPGIG A I
Sbjct: 76 AAPEEAVMSAWAGLGYYSRARNLHACAKA---VAAAGGFPDTVEGLRRLPGIGAYTAGAI 132
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + ++
Sbjct: 133 AAIAFDRPAAAVDGNVERVVSRLFAIETPLPAARAEIRALAESLVPRTRPGDFAQAVMDL 192
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 193 GATLCTPKRPACALCPWMAPCRARAE 218
>gi|317493455|ref|ZP_07951876.1| A/G-specific adenine glycosylase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918398|gb|EFV39736.1| A/G-specific adenine glycosylase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 363
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 7/216 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
L + ++ + + ++ + + ++ ++ Q+ V
Sbjct: 7 LTLMMLAQQFAQSVLTWYDRYGRKTLPWQSPKTPYQVWLSEVMLQQTQVATVIPYFLRFM 66
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E + + A + ++ + +G Y + N+ + ++ + + P + + + LP
Sbjct: 67 EKFPDVRALAAAPQDEVLHLWTGLGYYA-RGRNLHKAAQTIMEKHGGEFPTSFDDVCALP 125
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK 189
G+GR A ILS++ G +D ++ R+ R G K VE L I P
Sbjct: 126 GVGRSTAGAILSLSLGQHYPILDGNVKRVLARCYAVEGWPGKKDVENRLWEISEQVTPAN 185
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C +S+ C
Sbjct: 186 GVSQFNQAMMDLGAMVCTRSKPKCELCPLSSGCIAY 221
>gi|186896658|ref|YP_001873770.1| adenine DNA glycosylase [Yersinia pseudotuberculosis PB1/+]
gi|186699684|gb|ACC90313.1| A/G-specific adenine glycosylase [Yersinia pseudotuberculosis
PB1/+]
Length = 419
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 7/214 (3%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + ++ + + ++ ++ Q+ V +
Sbjct: 47 LMMQAQQFAHVVLDWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLR 106
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
Q + A ++ + +G Y ++ N+ + +++ + P T + + LPGI
Sbjct: 107 FPDIQALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGI 165
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
GR A ILS++ G +D ++ R+ R G K + Q + P
Sbjct: 166 GRSTAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANRV 225
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 226 GQFNQAMMDLGAMVCTRSKPKCELCPLNIGCMAY 259
>gi|307706669|ref|ZP_07643475.1| A/G-specific adenine glycosylase [Streptococcus mitis SK321]
gi|307617913|gb|EFN97074.1| A/G-specific adenine glycosylase [Streptococcus mitis SK321]
Length = 390
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F ++ P T EG++ L
Sbjct: 70 DWFPTVESLATAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGDQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|260101287|ref|ZP_05751524.1| endonuclease III [Lactobacillus helveticus DSM 20075]
gi|260084872|gb|EEW68992.1| endonuclease III [Lactobacillus helveticus DSM 20075]
Length = 206
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + E + +P+ KGEL++ N F L+ AV++SAQ+TD VN+ +
Sbjct: 5 LLSDDEARTVLKRILAMYPNAKGELHWDNTFHLLCAVMMSAQTTDKMVNRVMPDFIKKFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG+YR K++++ + + IL+ ++D+KIP+ + L PG+G
Sbjct: 65 TPEVLANASIEEIESTIKTIGLYRSKAKHLKATAKILVEKYDSKIPEDKKTLMTFPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L+ +G+P I VDTHI RIS + K P++VEQ L I+P H+
Sbjct: 125 KTASVVLAEGYGVPAIAVDTHISRISKAFHIVNQKAAPHEVEQRLESILPKNEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY+ AR
Sbjct: 185 MILFGRYIMPAR 196
>gi|196009979|ref|XP_002114854.1| hypothetical protein TRIADDRAFT_4611 [Trichoplax adhaerens]
gi|190582237|gb|EDV22310.1| hypothetical protein TRIADDRAFT_4611 [Trichoplax adhaerens]
Length = 218
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 17/216 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNKATKHL 73
++ EI + + K +L + +++ V+ ++ Q+ V
Sbjct: 1 DVAEIQKCLLAWYDANKRDLPWRRMATVEDIDRRAYSVWVSEIMLQQTQVATVISYYNKW 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ T + + +++ +G Y + + I+ + E +
Sbjct: 61 IKKWPTIKALSEATLEEVNELWSGLGYYSRARRLHEGVIKIMTKFNGHMPRNASELHKEI 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSL-----LRII 186
PGIGR A+ I S+++G T VD ++ R+ +R+ A + VE L +
Sbjct: 121 PGIGRYTASAIASISYGEVTGVVDGNVIRVLSRLRAIGAESNSKVAVEAIWFINSGLTLF 180
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
YNA ++ G VC R P C SC I++ C
Sbjct: 181 FMVCNYNAIQAVMELGSTVCTPRNPNCSSCPINDYC 216
>gi|323489815|ref|ZP_08095040.1| A/G-specific adenine DNA glycosylase [Planococcus donghaensis
MPA1U2]
gi|323396553|gb|EGA89374.1| A/G-specific adenine DNA glycosylase [Planococcus donghaensis
MPA1U2]
Length = 332
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+ V K E T + E+ L +G Y ++
Sbjct: 8 DPYQIWISEIMLQQTRVDTVIPYYKRFVEKFPTLNDLAEADEQILLKQWEGLGYYS-RAR 66
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + + +P + ++ L G+G A +LS+A+GIP VD ++ R+ +R
Sbjct: 67 NLQAGVKEVAENYGGIVPNNRKEISSLKGVGPYTAGAVLSIAYGIPEHAVDGNVMRVLSR 126
Query: 167 I-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
I +A KT E+++ II + + + L+ G +C P+C C +
Sbjct: 127 ILLIEEDIAKPKTRKIFEEAVTEIISHEDPSSFNQGLMELGALICTPTSPKCLLCPVREH 186
Query: 222 CKRIKQ 227
C +
Sbjct: 187 CAAFHE 192
>gi|146293794|ref|YP_001184218.1| A/G-specific adenine glycosylase [Shewanella putrefaciens CN-32]
gi|145565484|gb|ABP76419.1| A/G-specific DNA-adenine glycosylase [Shewanella putrefaciens
CN-32]
Length = 362
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWNGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K Q + P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEEQLWQLTDTLTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C C ++ CK
Sbjct: 189 GASICTRSKPNCAVCPVAIDCKA 211
>gi|323464046|gb|ADX76199.1| A/G-specific adenine glycosylase [Staphylococcus pseudintermedius
ED99]
Length = 348
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 8/203 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + ++ + N + + ++ ++ Q+ V E T + + E
Sbjct: 11 LLEWFEKEQRQMPWRETKNPYYIWISEVMLQQTQVDTVRDYYHRFVEAFPTIEDLANADE 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y ++ N + + ++ D +PQ E L G+G ++S+A
Sbjct: 71 DDVLKLWEGLGYYS-RARNFHTAAKEVVAFHDGSVPQHPETFLNLKGVGPYTQAAVMSIA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWLVLHGRY 204
F +P VD ++FR+ +R+ T + ++ + P + + + ++ G
Sbjct: 130 FDLPLATVDGNVFRVWSRLNDDTRDTALQSTRKAYENELAPYVAQQSGDFNQAMMELGAL 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC + P C C + C+ +Q
Sbjct: 190 VCTPKAPLCLFCPVQMHCESYEQ 212
>gi|295697172|ref|YP_003590410.1| A/G-specific adenine glycosylase [Bacillus tusciae DSM 2912]
gi|295412774|gb|ADG07266.1| A/G-specific adenine glycosylase [Bacillus tusciae DSM 2912]
Length = 384
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 88/218 (40%), Gaps = 10/218 (4%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ +EL + + + +L + + + + V+ + Q+ V +
Sbjct: 1 MERERELAVRVGQILVEWYERQHRDLPWRKTRDPYRIWVSETMLQQTRVETVIPYYERFL 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E + + + E+++ +G Y + N++ + +++ F ++P E + +P
Sbjct: 61 EEFPSVRDLAQATEEEVLKQWEGLGYYSRAQ-NLLRGAQVVMERFGGRVPDDPEVIREIP 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPK 189
G+G A ILS+A+G VD + R+ RI L K+ + IPP
Sbjct: 120 GVGPYTAGAILSIAYGRDVPAVDGNGLRVFARIFLVDEPVDKPAGRRKISSLMQSAIPPG 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C R P+C C + C+ ++
Sbjct: 180 CGGALNQAVMDLGSGICLPRAPKCHECPVLRWCRAAEE 217
>gi|167044454|gb|ABZ09130.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_APKG6D9]
Length = 216
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 102/179 (56%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F++++ +LSA++ D KA K LF +++ K ++ I++IG + KS+
Sbjct: 33 PFSILIGTILSARTKDEATTKAVKALFSKYKNSKQLANAKVKDVEKIIKSIGFFHVKSKR 92
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
II ++ I+ ++ K+P L+ L LPG+GRK AN +L AF P I VD H+ RISNR+
Sbjct: 93 IIEVAKIINTKYKGKVPDNLDTLVELPGVGRKTANCVLVYAFEKPAIPVDIHVHRISNRL 152
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
GL K P + EQ L++ IP K+ + + V++G+ +CK P C C I CK K
Sbjct: 153 GLVDTKNPEETEQELMKKIPKKYWIDINDTFVMYGQNICKPISPMCDVCKIKKNCKYYK 211
>gi|149007113|ref|ZP_01830782.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP18-BS74]
gi|147761417|gb|EDK68383.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP18-BS74]
Length = 220
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDF 220
>gi|296445781|ref|ZP_06887734.1| A/G-specific adenine glycosylase [Methylosinus trichosporium OB3b]
gi|296256761|gb|EFH03835.1| A/G-specific adenine glycosylase [Methylosinus trichosporium OB3b]
Length = 351
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 13/201 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V +
Sbjct: 13 LLRWYDRRRRALPWRARAGETADPYAVWLSEIMLQQTTVEAVKPYFAAFLARWPDVAALA 72
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A ++++ +G Y + + P+ L LPG+G A I
Sbjct: 73 AAPQEEVMKAWAGLGYYARARNLH---ACARAIAARGAFPREQRELLALPGVGPYTAAAI 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++A+ P + VD ++ R+ R+ ++ + + P + + L+
Sbjct: 130 AAIAYDAPVVAVDGNVERVVARLFAIERPAREAKAELREQAQSLFPGRRAGDFTQALMDL 189
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC R P+C C C
Sbjct: 190 GATVCTPRGPRCGDCPFHGAC 210
>gi|163852595|ref|YP_001640638.1| A/G-specific adenine glycosylase [Methylobacterium extorquens PA1]
gi|163664200|gb|ABY31567.1| A/G-specific adenine glycosylase [Methylobacterium extorquens PA1]
Length = 441
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 74/206 (35%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 46 LLTWYDRHRRALPWRALPGETPDPYRVWLSEVMLQQTTVTAVKPYFVKFLTLFPNVAALA 105
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + +G Y + + P T +GL +LPGIG A I
Sbjct: 106 AAPEEAVMAAWAGLGYYSRARNLH---ACAKSVASAGGFPDTEDGLRKLPGIGAYTAGAI 162
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + + L+
Sbjct: 163 AAIAFDRPAAAVDGNVERVMSRLHAIETPLPAARAQIRLFTQALVPERRPGDFAQALMDL 222
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 223 GATLCTPKRPACALCPWMLPCRARAE 248
>gi|120598134|ref|YP_962708.1| A/G-specific adenine glycosylase [Shewanella sp. W3-18-1]
gi|120558227|gb|ABM24154.1| A/G-specific DNA-adenine glycosylase [Shewanella sp. W3-18-1]
Length = 362
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWNGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K Q + P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEEQLWQLTDTLTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C C ++ CK
Sbjct: 189 GASICTRSKPNCAVCPVAIDCKA 211
>gi|218531436|ref|YP_002422252.1| A/G-specific adenine glycosylase [Methylobacterium chloromethanicum
CM4]
gi|218523739|gb|ACK84324.1| A/G-specific adenine glycosylase [Methylobacterium chloromethanicum
CM4]
Length = 441
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 13/206 (6%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + + + +
Sbjct: 46 LLTWYDRHRRALPWRALPGETPDPYRVWLSEVMLQQTTVTAVKPYFEMFLTLFPSVAALA 105
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+ + + +G Y + + P T +GL +LPGIG A I
Sbjct: 106 AAPEEAVMSAWAGLGYYSRARNLH---ACAKSVASAGGFPDTEDGLRKLPGIGAYTAGAI 162
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLH 201
++AF P VD ++ R+ +R+ P ++ ++P + + L+
Sbjct: 163 AAIAFDRPAAAVDGNVERVMSRLHAIETPLPAARAQIRLFTQALVPDRRPGDFAQALMDL 222
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C ++P C C C+ +
Sbjct: 223 GATLCTPKRPACALCPWMLPCRARAE 248
>gi|322389494|ref|ZP_08063045.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis ATCC
903]
gi|321143769|gb|EFX39196.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis ATCC
903]
Length = 384
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 80/216 (37%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + + + + ++ ++ Q+ V + +
Sbjct: 11 MWEEEKIASFREKLLAWYDAHKRDLPWRRTQDPYKIWISEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++ P + + +++L G
Sbjct: 71 WFPTVADLAQASEEKLLKAWEGLGYYS-RVRNMQKAAQQIMENHGGVFPSSYDEISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+ VD ++ R+ R + + + +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLARLFEVDYDIGVPTNRKIFQAMMEILIDPAR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|238763271|ref|ZP_04624236.1| A/G-specific adenine glycosylase [Yersinia kristensenii ATCC 33638]
gi|238698544|gb|EEP91296.1| A/G-specific adenine glycosylase [Yersinia kristensenii ATCC 33638]
Length = 357
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 79/213 (37%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + + + + ++ ++ Q+ V +
Sbjct: 1 MMQAQQFAHVVLEWYQSFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIG
Sbjct: 61 PDIRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDDILALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQY 192
R A ILS++ G +D ++ R+ R G K + Q + P K
Sbjct: 120 RSTAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKEVEGRLWQISENVTPAKEVG 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 QFNQAMMDLGAIVCTRSKPKCELCPLNIGCLAY 212
>gi|332139686|ref|YP_004425424.1| A/G-specific adenine glycosylase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549708|gb|AEA96426.1| A/G-specific adenine glycosylase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 355
Score = 108 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 10/212 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
E + F V + + V+ ++ Q+ V + T +
Sbjct: 11 AERVLAWFDKHGRKHLPWQQEVTPYKVWVSEIMLQQTQVTTVIPYFERFMASFPTVHDLA 70
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + ++ +G Y ++ N+ ++ L++E++ + P +LE + LPGIGR A I
Sbjct: 71 KASQDDVLHHWTGLGYYA-RARNLHKAANRLVDEYNGEFPFSLEEVIDLPGIGRSTAGAI 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--------HQYNAH 195
LS++ + +D ++ R+ R G KVE L + N
Sbjct: 130 LSLSRNMRFAILDGNVKRVLARYYAISGWPGQKKVENQLWEVAEKNTPTNPEGGRCANYT 189
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C KP+C C + C Q
Sbjct: 190 QVMMDLGAIICTRSKPKCDECPLQADCIAYAQ 221
>gi|325954786|ref|YP_004238446.1| A/G-specific adenine glycosylase [Weeksella virosa DSM 16922]
gi|323437404|gb|ADX67868.1| A/G-specific adenine glycosylase [Weeksella virosa DSM 16922]
Length = 348
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 9/205 (4%)
Query: 31 LFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L + K L + N + + ++ ++ Q+ + + +
Sbjct: 10 LILAWFDHNKRILPWRNTKDPYKIWLSEIILQQTRVQQGIAYYERFISHFPILEMLARAD 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E ++ + +G Y ++ N+ + + L D+ P + L +L GIG A+ I S+
Sbjct: 70 ENQVLKLWQGLGYYS-RARNLHATAKYLYLHEDSIFPDNSQDLKKLKGIGDYTASAIASI 128
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ T +D +++R+ R ++ T K II + + + ++ G
Sbjct: 129 CYNEVTPALDGNMYRVFARYFGLYDDISEPATKKKFFALGKEIIDRERPGDFNQAVMDLG 188
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + +C++C ++ C +++
Sbjct: 189 AMICTPQNYKCEACPLNESCFALQK 213
>gi|227878660|ref|ZP_03996575.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus crispatus
JV-V01]
gi|256850387|ref|ZP_05555815.1| endonuclease III [Lactobacillus crispatus MV-1A-US]
gi|262046464|ref|ZP_06019426.1| endonuclease III [Lactobacillus crispatus MV-3A-US]
gi|312977488|ref|ZP_07789236.1| endonuclease III [Lactobacillus crispatus CTV-05]
gi|227861724|gb|EEJ69328.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus crispatus
JV-V01]
gi|256712784|gb|EEU27777.1| endonuclease III [Lactobacillus crispatus MV-1A-US]
gi|260573335|gb|EEX29893.1| endonuclease III [Lactobacillus crispatus MV-3A-US]
gi|310895919|gb|EFQ44985.1| endonuclease III [Lactobacillus crispatus CTV-05]
Length = 209
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 118/192 (61%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + +E ++ +P +GEL + +F L+ AV+LSAQ+TD VN+ ++
Sbjct: 5 LLSDEEARKVLKKILALYPDAQGELQWDTNFHLLCAVMLSAQTTDKMVNRVMPSFSKMFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG++R K++++ + + IL+++++ ++P+ + L LPG+G
Sbjct: 65 TPEVLAKAPIEEIEHEIKTIGLFRSKAKHLKATAQILVDKYNGQVPKDKKLLMTLPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +G+P I VDTH+ RIS + + K TP++VE+ L I+P H+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDDKATPHEVEKRLEAILPKSEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY AR
Sbjct: 185 MILFGRYTMPAR 196
>gi|254360685|ref|ZP_04976834.1| A/G-specific adenine glycosylase [Mannheimia haemolytica PHL213]
gi|153091225|gb|EDN73230.1| A/G-specific adenine glycosylase [Mannheimia haemolytica PHL213]
Length = 381
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F ++ + + ++ ++ Q+ V E T +
Sbjct: 19 AKAVLAWF-EQYGRKHLPWQQNKTLYQVWLSEVMLQQTQVATVIPYFARFMERFPTVIDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + +EF + P + + L G+GR A
Sbjct: 78 ANASIDEVLHLWTGLGYYA-RARNLHKAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWL 198
ILS P +D ++ R+ +R G K VE L ++ P + + +
Sbjct: 137 ILSSVLDAPHPILDGNVKRVLSRYFAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G +C KP+C C + CK
Sbjct: 197 MDLGAMICTRTKPKCLLCPLQENCK 221
>gi|148985123|ref|ZP_01818362.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP3-BS71]
gi|148989250|ref|ZP_01820630.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP6-BS73]
gi|168491149|ref|ZP_02715292.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC0288-04]
gi|182684044|ref|YP_001835791.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae CGSP14]
gi|225856895|ref|YP_002738406.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae P1031]
gi|225860938|ref|YP_002742447.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230881|ref|ZP_06964562.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254362|ref|ZP_06977948.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502776|ref|YP_003724716.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
TCH8431/19A]
gi|303258863|ref|ZP_07344842.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP-BS293]
gi|303261547|ref|ZP_07347494.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP14-BS292]
gi|303264217|ref|ZP_07350137.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS397]
gi|303266152|ref|ZP_07352045.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS457]
gi|303268121|ref|ZP_07353921.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS458]
gi|133950373|gb|ABO44021.1| MutY [Streptococcus pneumoniae]
gi|147922568|gb|EDK73686.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP3-BS71]
gi|147925228|gb|EDK76307.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP6-BS73]
gi|182629378|gb|ACB90326.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae CGSP14]
gi|183574407|gb|EDT94935.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC0288-04]
gi|225724569|gb|ACO20421.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae P1031]
gi|225726746|gb|ACO22597.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238371|gb|ADI69502.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
TCH8431/19A]
gi|301800149|emb|CBW32754.1| putative A/G-specific adenine glycosylase [Streptococcus pneumoniae
OXC141]
gi|301801916|emb|CBW34640.1| putative A/G-specific adenine glycosylase [Streptococcus pneumoniae
INV200]
gi|302637127|gb|EFL67615.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP14-BS292]
gi|302639806|gb|EFL70262.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP-BS293]
gi|302642338|gb|EFL72685.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS458]
gi|302644322|gb|EFL74576.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS457]
gi|302646029|gb|EFL76256.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS397]
gi|327389464|gb|EGE87809.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA04375]
Length = 391
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|323466414|gb|ADX70101.1| Endonuclease III [Lactobacillus helveticus H10]
Length = 206
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + E + +P+ KGEL++ N F L+ AV++SAQ+TD VN+ +
Sbjct: 5 LLSDDEARTVLKRILAMYPNAKGELHWDNTFHLLCAVMMSAQTTDKMVNRVMPDFIKKFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG+YR K++++ + + IL+ ++D+KIP+ + L PG+G
Sbjct: 65 TPEVLANASIEEIESTIKTIGLYRSKAKHLKATAKILVEKYDSKIPEDKKTLMTFPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +G+P I VDTHI RIS + K P++VEQ L I+P H+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHISRISKAFHIVNQKAAPHEVEQRLESILPKNEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY+ AR
Sbjct: 185 MILFGRYIMPAR 196
>gi|301794311|emb|CBW36736.1| putative A/G-specific adenine glycosylase [Streptococcus pneumoniae
INV104]
gi|332203076|gb|EGJ17144.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA47901]
Length = 391
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|261491851|ref|ZP_05988430.1| A/G-specific adenine glycosylase [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261312506|gb|EEY13630.1| A/G-specific adenine glycosylase [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 381
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F ++ + + ++ ++ Q+ V E T +
Sbjct: 19 AKAVLAWF-EQYGRKHLPWQQNKTLYQVWLSEVMLQQTQVATVIPYFARFMERFPTVIDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + +EF + P + + L G+GR A
Sbjct: 78 ANASIDEVLHLWTGLGYYA-RARNLHKAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWL 198
ILS P +D ++ R+ +R G K VE L ++ P + + +
Sbjct: 137 ILSSVLDAPHPILDGNVKRVLSRYFAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G +C KP+C C + CK
Sbjct: 197 MDLGAMICTRTKPKCLLCPLQENCK 221
>gi|126175241|ref|YP_001051390.1| A/G-specific adenine glycosylase [Shewanella baltica OS155]
gi|125998446|gb|ABN62521.1| A/G-specific DNA-adenine glycosylase [Shewanella baltica OS155]
Length = 363
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K VE L ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEAQLWQLTDTYTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|190358497|ref|NP_001121897.1| A/G-specific adenine DNA glycosylase isoform 5 [Homo sapiens]
gi|311347980|gb|ADP90936.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347992|gb|ADP90946.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311347998|gb|ADP90951.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348004|gb|ADP90956.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348016|gb|ADP90966.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348022|gb|ADP90971.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348028|gb|ADP90976.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348034|gb|ADP90981.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348040|gb|ADP90986.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348046|gb|ADP90991.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348058|gb|ADP91001.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348064|gb|ADP91006.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348070|gb|ADP91011.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348076|gb|ADP91016.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348082|gb|ADP91021.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348088|gb|ADP91026.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348094|gb|ADP91031.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348100|gb|ADP91036.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348106|gb|ADP91041.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348112|gb|ADP91046.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348118|gb|ADP91051.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348124|gb|ADP91056.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348130|gb|ADP91061.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348136|gb|ADP91066.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348142|gb|ADP91071.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348148|gb|ADP91076.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348154|gb|ADP91081.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348160|gb|ADP91086.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348166|gb|ADP91091.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348172|gb|ADP91096.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348178|gb|ADP91101.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348184|gb|ADP91106.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348190|gb|ADP91111.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348196|gb|ADP91116.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348202|gb|ADP91121.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348214|gb|ADP91131.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 549
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 100 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 159
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 160 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 219
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 220 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 279
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 280 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 311
>gi|118579102|ref|YP_900352.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
gi|118501812|gb|ABK98294.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
Length = 218
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
E+ + L ++ S + + F ++V+ ++S ++ D A+ +
Sbjct: 1 MKVDEIHRVMALLREEYASWRTPAVTIVAECERSPFKVLVSCIISLRTKDEVTAAASARM 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F AD+ ++ML + E ++ I G YR K+ I ++H L+ EF +P +E L R
Sbjct: 61 FARADSAERMLKLAEDEIAALIYPAGFYRTKAGQIHGIAHRLVTEFGGNVPDEMEDLLRF 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++L++ FG P I VDTH+ RI NR+G ++P + E +L +P ++
Sbjct: 121 RGVGRKTANLVLTLGFGKPGICVDTHVHRICNRLGYVSTRSPEQTEMALRAQLPGEYWIA 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+ C P+C +C I+ C R+
Sbjct: 181 INDLLVAFGQNHCHPISPRCTTCRIAEFCSRV 212
>gi|256843256|ref|ZP_05548744.1| endonuclease III [Lactobacillus crispatus 125-2-CHN]
gi|293380920|ref|ZP_06626954.1| endonuclease III [Lactobacillus crispatus 214-1]
gi|256614676|gb|EEU19877.1| endonuclease III [Lactobacillus crispatus 125-2-CHN]
gi|290922495|gb|EFD99463.1| endonuclease III [Lactobacillus crispatus 214-1]
Length = 209
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + +E + +P +GEL + +F L+ AV+LSAQ+TD VN+ ++
Sbjct: 5 LLSDEEARRVLKKILALYPDAQGELQWDTNFHLLCAVMLSAQTTDKMVNRVMPSFSKMFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG++R K++++ + + IL+++++ ++P+ + L LPG+G
Sbjct: 65 TPEVLAKAPIEEIEHEIKTIGLFRSKAKHLKATAQILVDKYNGQVPKDKKLLMTLPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +G+P I VDTH+ RIS + + K TP++VE+ L I+P H+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDDKATPHEVEKRLEAILPKSEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY AR
Sbjct: 185 MILFGRYTMPAR 196
>gi|123443637|ref|YP_001007609.1| adenine DNA glycosylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090598|emb|CAL13467.1| A/G-specific adenine glycosylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|327412796|emb|CAX67802.1| A/G specific adenine glycosylase [Yersinia enterocolitica]
Length = 362
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 2 QAQQFAHMVLEWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 62 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDEILALPGIGRS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS++ G +D ++ R+ R G K + Q + P K
Sbjct: 121 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKDVEGRLWQISEDVTPAKGVGQF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 181 NQAMMDLGATVCTRSKPKCELCPLNIGCLAY 211
>gi|160876302|ref|YP_001555618.1| A/G-specific adenine glycosylase [Shewanella baltica OS195]
gi|160861824|gb|ABX50358.1| A/G-specific adenine glycosylase [Shewanella baltica OS195]
gi|315268491|gb|ADT95344.1| A/G-specific adenine glycosylase [Shewanella baltica OS678]
Length = 363
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K VE L ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEAQLWQLTDTYTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|294634371|ref|ZP_06712908.1| A/G-specific adenine glycosylase [Edwardsiella tarda ATCC 23685]
gi|291092179|gb|EFE24740.1| A/G-specific adenine glycosylase [Edwardsiella tarda ATCC 23685]
Length = 362
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 40 KGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V + + Q + ++ +
Sbjct: 20 RKTLPWQNPKTPYRVWLSEVMLQQTQVATVLPYFQRFIQRFPDVQALAEAPLDEVLHLWT 79
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ ++ + P+ + + LPGIGR A ILS++ G +
Sbjct: 80 GLGYYA-RARNLHKAAQTIVAQYGGEFPREFDQVAALPGIGRSTAGAILSLSLGQHHPIL 138
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G +VE+ L ++ P + ++ G VC +P
Sbjct: 139 DGNVKRVLARCYAVAGWPGKKEVEKRLWQLSAQVTPADGVSQFNQAMMDLGALVCTRSRP 198
Query: 212 QCQSCIISNLCKRI 225
+C+ C +S+ C
Sbjct: 199 KCELCPLSSGCLAY 212
>gi|119953522|ref|YP_945731.1| endonuclease III [Borrelia turicatae 91E135]
gi|119862293|gb|AAX18061.1| endonuclease III [Borrelia turicatae 91E135]
Length = 226
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 106/202 (52%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+++ I ++P K L + N + L++ V+LSA++TD VNK LF+ + +
Sbjct: 24 DIDLIVDETLSRYPDVKPFLNFRNSYELLIMVILSARTTDNMVNKIAPELFKRYGDFESL 83
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++N I +G Y KS+NII+ + +++ F IP + L LPG+GRK ANV
Sbjct: 84 ANADLINVENLIYKLGFYSNKSKNIINCAQMVLESFKGIIPNNIFDLVSLPGVGRKTANV 143
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
IL + + P I VDTH R+ R G+ +TP K+E L IP QY + HGR
Sbjct: 144 ILGVVYDKPAIIVDTHFSRVVIRHGITFERTPLKIELDLKSKIPYDKQYKFSMAINKHGR 203
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
+C +R C++C + R+
Sbjct: 204 DICTSRSKTCKNCFLEKFSPRL 225
>gi|152978221|ref|YP_001343850.1| A/G-specific adenine glycosylase [Actinobacillus succinogenes 130Z]
gi|150839944|gb|ABR73915.1| A/G-specific adenine glycosylase [Actinobacillus succinogenes 130Z]
Length = 373
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 6/203 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ F + + + ++ ++ Q+ V + E +
Sbjct: 12 ARAVLAWFEQFGRKHLPWQQHKTLYGVWLSEVMLQQTQVATVIPYFERFIETFPNVTALA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++ + +G Y ++ N+ + + +EF + P E + L GIGR A I
Sbjct: 72 DASQDEVLHLWMGLGYYA-RARNLHKAAQQIRDEFRGEFPTEFEQVWSLAGIGRSTAGAI 130
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLL----RIIPPKHQYNAHYWLV 199
LS G P +D ++ R+ R L G KVE L + P + + ++
Sbjct: 131 LSSVLGQPYPILDGNVKRVLARYFLVEGWAGDKKVEDRLWGLSAEVTPRDRTADFNQAMM 190
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VC KP+C C + C
Sbjct: 191 DLGALVCTRSKPKCALCPLREKC 213
>gi|328870663|gb|EGG19036.1| mutY like protein [Dictyostelium fasciculatum]
Length = 1451
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 86/234 (36%), Gaps = 28/234 (11%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV----------------------NHFTLIVAVLLS 58
+++ I + K +L + + + + V+ ++
Sbjct: 108 KADDIKLIRTNLLQWYQKNKRDLPWRLKSLPIKDKDGSVTVKQLTQQEHAYRVWVSEIMC 167
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
Q+ V + + + + +G YR +++++ + +++
Sbjct: 168 QQTRISVVVDYFNRWMTEWPSVGDLARATLEDVNKVWAGLGYYR-RAKHLHLGAQYVVSN 226
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK- 177
+ IP T +GL ++PGIG A I S+AF VD ++ R+ +R+ K
Sbjct: 227 LKSIIPGTPDGLVKIPGIGPYSAGAISSIAFNNSVPLVDGNVIRVLSRLRAIGSDPKKKD 286
Query: 178 ----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ I+ P H + + L+ G VC P C C I+ +C K+
Sbjct: 287 SIKLHWKLAGDIVDPSHPGDFNQSLMELGATVCTITSPLCNQCPINTICNAKKE 340
>gi|315038479|ref|YP_004032047.1| endonuclease III [Lactobacillus amylovorus GRL 1112]
gi|325956894|ref|YP_004292306.1| endonuclease III [Lactobacillus acidophilus 30SC]
gi|312276612|gb|ADQ59252.1| endonuclease III [Lactobacillus amylovorus GRL 1112]
gi|325333459|gb|ADZ07367.1| endonuclease III [Lactobacillus acidophilus 30SC]
gi|327183673|gb|AEA32120.1| endonuclease III [Lactobacillus amylovorus GRL 1118]
Length = 209
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + E E+ +P KGEL++ + F L+ AVL+SAQ+TD VN+ +
Sbjct: 4 KLLSDDEAREVLKKILSLYPDAKGELHWDSKFHLLCAVLMSAQTTDKMVNRVMPQFSKDF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TP+ + ++++N I+TIG+YR K++++ + + IL++++++++P+ + L LPG+G
Sbjct: 64 PTPESLADAPIEEIENEIKTIGLYRSKAKHLKATAQILVDKYNSQVPKDKQILMTLPGVG 123
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RIS + + K TP++VE+ L I+P H+
Sbjct: 124 EKTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDEKATPHEVEKRLEAILPKDEWIKTHH 183
Query: 197 WLVLHGRYV 205
++L GRY
Sbjct: 184 AMILFGRYT 192
>gi|309810839|ref|ZP_07704640.1| putative A/G-specific adenine glycosylase [Dermacoccus sp.
Ellin185]
gi|308435145|gb|EFP58976.1| putative A/G-specific adenine glycosylase [Dermacoccus sp.
Ellin185]
Length = 298
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 9/215 (4%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATK 71
+ + +++ + + L + + + ++ ++S Q+ V +
Sbjct: 1 MSTPLPEERRDDLVARLNAWFLDAARPLPWRSPDTTPWGIFLSEVMSQQTPVARVAPIWQ 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E TP + A + + +G R+ + + ++ ++P T + L
Sbjct: 61 EWLERWPTPSDLAAAAPGEAVRHWGRLGYPRRALR-LHDAAVTMVERHGGEVPSTHDELL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRII-P 187
LPG+G A + S AFG +DT+I R+ R E+ L ++ P
Sbjct: 120 ALPGVGEYTAAAVASFAFGERVTVIDTNIRRVEARTVTGVEFPRPNLSAAERRLAALLLP 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + G VC A+ P C +C I + C
Sbjct: 180 QDDHVLWNAASMEFGAVVCTAKAPACGTCPIIDAC 214
>gi|148998658|ref|ZP_01826097.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP11-BS70]
gi|168577193|ref|ZP_02723002.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae MLV-016]
gi|307067877|ref|YP_003876843.1| A/G-specific DNA glycosylase [Streptococcus pneumoniae AP200]
gi|147755495|gb|EDK62543.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP11-BS70]
gi|183577197|gb|EDT97725.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae MLV-016]
gi|306409414|gb|ADM84841.1| A/G-specific DNA glycosylase [Streptococcus pneumoniae AP200]
gi|332200676|gb|EGJ14748.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA41317]
Length = 391
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATASEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|219849405|ref|YP_002463838.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
gi|219543664|gb|ACL25402.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
Length = 308
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+I + S +L + + + ++VA ++ Q+ V + T
Sbjct: 2 IEQIRSDLLHWFHSYARDLPWRRTRDPYAIMVAEVMLQQTQVDRVIPKYQAFLSAFPTVA 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A ++ +G R+ N+ + +++ ++ ++P + L LPGIG A
Sbjct: 62 ALAAAPTAEVIRLWAGLGYNRRAV-NLQRAAQVIMEQYGGQVPSAVADLRALPGIGPYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN----KVEQSLLRIIPPKHQYNAHYW 197
I AF +DT+I R+ R+ + P ++ +IPP + +
Sbjct: 121 GAIACFAFEQDVAFLDTNIRRVVRRLCVGPDDRSTPSDGELLAHATALIPPGQGWTWNQA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C + P C C + + C+
Sbjct: 181 IMELGALICTSTNPACWRCPLRSYCRSY 208
>gi|15903151|ref|NP_358701.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae R6]
gi|116516670|ref|YP_816557.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae D39]
gi|149002596|ref|ZP_01827528.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP14-BS69]
gi|149012279|ref|ZP_01833348.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP19-BS75]
gi|149019220|ref|ZP_01834582.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP23-BS72]
gi|168484876|ref|ZP_02709821.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC1873-00]
gi|168493150|ref|ZP_02717293.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC3059-06]
gi|169832747|ref|YP_001694659.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
Hungary19A-6]
gi|225854694|ref|YP_002736206.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae JJA]
gi|225859009|ref|YP_002740519.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae 70585]
gi|237649930|ref|ZP_04524182.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae CCRI
1974]
gi|237822521|ref|ZP_04598366.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae CCRI
1974M2]
gi|303254276|ref|ZP_07340385.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS455]
gi|307127184|ref|YP_003879215.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae 670-6B]
gi|15458733|gb|AAK99911.1| Similar to A/G-specific adenine glycosylase [Streptococcus
pneumoniae R6]
gi|116077246|gb|ABJ54966.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae D39]
gi|133950258|gb|ABO44017.1| MutY [Streptococcus pneumoniae]
gi|147759207|gb|EDK66200.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP14-BS69]
gi|147763605|gb|EDK70540.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP19-BS75]
gi|147931090|gb|EDK82069.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP23-BS72]
gi|168995249|gb|ACA35861.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
Hungary19A-6]
gi|172041963|gb|EDT50009.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC1873-00]
gi|183393288|gb|ACC61804.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183393290|gb|ACC61805.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183393294|gb|ACC61807.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183393296|gb|ACC61808.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183576791|gb|EDT97319.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC3059-06]
gi|225720164|gb|ACO16018.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae 70585]
gi|225724219|gb|ACO20072.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae JJA]
gi|302598770|gb|EFL65807.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae BS455]
gi|306484246|gb|ADM91115.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae 670-6B]
gi|332074559|gb|EGI85033.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA17545]
gi|332074838|gb|EGI85310.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA41301]
gi|332201691|gb|EGJ15761.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA47368]
Length = 391
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|331266317|ref|YP_004325947.1| A/G-specific adenine glycosylase, putative [Streptococcus oralis
Uo5]
gi|326682989|emb|CBZ00606.1| A/G-specific adenine glycosylase, putative [Streptococcus oralis
Uo5]
Length = 392
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMADFGGQFPNTYEGISCLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I PK
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGVPSNRKIFQAMMEILIDPK 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|319957677|ref|YP_004168940.1| a/g-specific DNA-adenine glycosylase [Nitratifractor salsuginis DSM
16511]
gi|319420081|gb|ADV47191.1| A/G-specific DNA-adenine glycosylase [Nitratifractor salsuginis DSM
16511]
Length = 334
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 79/205 (38%), Gaps = 10/205 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNV-NKATKHLFEIAD 78
+E+ +L + + +L + + + + ++ ++ Q+ V + E
Sbjct: 12 RYKELHERLNLWYREHGRHDLPWRQTRDPYRIYLSEIMLQQTQVSTVLERFYFPFLERFP 71
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + E+++ +G Y + + +P T + L RLPGIGR
Sbjct: 72 TLAVVAEASEEEVLKAWEGLGYYSRARHLHR-----TARLCNGVLPSTSQELERLPGIGR 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
A I AF +D ++ RI R T ++ + R+ K Y+ + +
Sbjct: 127 STARAIACFAFDEAAPILDANVRRILYRFFRRRKATERELWRMAERLFDAKRPYDYNQAM 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G +C + P+C C + C+
Sbjct: 187 MDLGAMICTPKDPRCDLCPLREGCR 211
>gi|56205986|emb|CAI21716.1| mutY homolog (E. coli) [Homo sapiens]
Length = 541
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 92 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 151
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 152 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 211
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 212 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 271
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 272 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 303
>gi|94499836|ref|ZP_01306372.1| A/G-specific adenine DNA glycosylase [Oceanobacter sp. RED65]
gi|94428037|gb|EAT13011.1| A/G-specific adenine DNA glycosylase [Oceanobacter sp. RED65]
Length = 350
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 8/208 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + F + + + V+ ++ Q+ V + + + +
Sbjct: 13 DAVLAWFDEH-GRHDLPWQHNKTPYRVWVSEIMLQQTQVTTVIPYYQRFMQRFPDVKSLA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A + ++ + +G Y ++ N+ + ++ ++ P T+ L L GIGR A I
Sbjct: 72 AAEQDEVLHLWTGLGYYA-RARNLHKCAQTVVEKYAGVFPSTVAELESLSGIGRSTAGAI 130
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLV 199
S++ G +D ++ R+ R G NK R P + + ++
Sbjct: 131 ASISMGQYAAILDGNVKRVLTRFHAVEGWPGNKKVADQLWDIAERYTPQQRTADYTQAMM 190
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C KP C+ C + C+ Q
Sbjct: 191 DLGATLCTRSKPGCEICPLHAQCEAYAQ 218
>gi|148993838|ref|ZP_01823240.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP9-BS68]
gi|168489056|ref|ZP_02713255.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae SP195]
gi|221231923|ref|YP_002511075.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae ATCC
700669]
gi|147927663|gb|EDK78688.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
SP9-BS68]
gi|183393292|gb|ACC61806.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183393298|gb|ACC61809.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae]
gi|183572447|gb|EDT92975.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae SP195]
gi|220674383|emb|CAR68933.1| putative A/G-specific adenine glycosylase [Streptococcus pneumoniae
ATCC 700669]
gi|332073566|gb|EGI84045.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae GA17570]
Length = 391
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATASEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|293365513|ref|ZP_06612222.1| A/G-specific adenine glycosylase [Streptococcus oralis ATCC 35037]
gi|307703471|ref|ZP_07640413.1| A/G-specific adenine glycosylase [Streptococcus oralis ATCC 35037]
gi|291315881|gb|EFE56325.1| A/G-specific adenine glycosylase [Streptococcus oralis ATCC 35037]
gi|307622878|gb|EFO01873.1| A/G-specific adenine glycosylase [Streptococcus oralis ATCC 35037]
Length = 392
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLNWYDENKRDLPWRRSKNPYRIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E +L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEDRLLKAWEGLGYYS-RVRNMQAAAQQIMADFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I PK
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGVPSNRKIFQAMMEILIDPK 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKEFSAAYQ 225
>gi|172087663|ref|YP_203805.2| adenine DNA glycosylase [Vibrio fischeri ES114]
gi|171902258|gb|AAW84917.2| adenine DNA glycosylase [Vibrio fischeri ES114]
Length = 350
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 82/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + + ++ ++ Q+ V + T + +
Sbjct: 10 EWYDNYGRKTLPWQLEKTPYKVWLSEIMLQQTQVTTVIPYFERFMTRFPTIVDLAHAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ +++ P ++ + LPGIGR A +LS++
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKTAQIIAEQYNGIFPTNIDDVIALPGIGRSTAGAVLSLSL 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRY 204
+D ++ R +R G K VE + P + + ++ G
Sbjct: 129 QQHHPILDGNVKRTLSRCFAIEGWPGKKSVENEMWAVAETHTPKQGVERYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC KP+C+ C +++LC+
Sbjct: 189 VCTRSKPKCELCPVNDLCQA 208
>gi|289209644|ref|YP_003461710.1| A/G-specific adenine glycosylase [Thioalkalivibrio sp. K90mix]
gi|288945275|gb|ADC72974.1| A/G-specific adenine glycosylase [Thioalkalivibrio sp. K90mix]
Length = 351
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + V+ ++ Q+ V E + + A
Sbjct: 6 ERLLAWFARHGRSDLPWQHPRTPYRVWVSEIMLQQTRVETVTPYFLRFMEHFPDVESLAA 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + + +G Y ++ N+ + +++E P T E L +LPGIGR A I+
Sbjct: 66 ADQDTVLHLWSGLGYYA-RARNLHRAAQHIVSEHGGDFPDTREALEQLPGIGRSTAAAII 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ A P +D + R+ R G ++ P + ++
Sbjct: 125 AQAHDRPEPILDGNAKRVLARHAAVEGWPGSPSVQRELWAEAEARTPTTRCADYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +P C C ++ C+ + Q
Sbjct: 185 LGALLCTRTRPDCPQCPVAGDCQALAQ 211
>gi|117927430|ref|YP_871981.1| HhH-GPD family protein [Acidothermus cellulolyticus 11B]
gi|117647893|gb|ABK51995.1| HhH-GPD family protein [Acidothermus cellulolyticus 11B]
Length = 335
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 12/237 (5%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYYV----NHFTLIVAV 55
+++ +G T + + + + + +L + + ++V+
Sbjct: 18 LITGSAGPDPRGRRAALSDLTQAPAQRVVHRVLAWYRRHGRRDLPWRRSDVTPWQVLVSE 77
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
++ Q+ V TPQ + A +G R+ + + +
Sbjct: 78 VMLQQTPVSRVLPVYAVWTARWPTPQSLAAATPADAVRAWGRLGYPRRAL-WLHQAARAI 136
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT- 174
++ F +P L LPGIGR A + + A+ +DT++ R+ R
Sbjct: 137 VDRFGGIVPDEPGVLATLPGIGRYTAAAVAAFAYRRRVAVLDTNVRRVLARFLTGVPHPT 196
Query: 175 --PNKVEQSLL-RIIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P E L ++P L+ G +C +R P C C ++ C +
Sbjct: 197 GTPRAAEHRSLDALLPKNADRAAQFSVALMELGALICTSRSPGCARCPLTTDCAWHR 253
>gi|332885919|gb|EGK06163.1| hypothetical protein HMPREF9456_00037 [Dysgonomonas mossii DSM
22836]
Length = 352
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 86/216 (39%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ + + + + K +L + N + + ++ ++ Q+ +
Sbjct: 1 MNMEKDLRLSSILIRWYEANKRDLPWRNTSDPYAIWLSEVILQQTRVDQGYSYYNKFIQK 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ E ++ + +G Y ++ N+ + + +++ +++ P+ + + +L G+
Sbjct: 61 YPKVDMLAMADEDEVLKLWQGLGYYS-RARNLQAAARLIVKDYNGVFPRQHKDVLKLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP----NKVEQS-LLRIIPPKHQ 191
G A I+S+++ P VD +++R+ +RI KV ++ +
Sbjct: 120 GDYTAAAIVSISYNEPYAVVDGNVYRVLSRIFAINEPIDSGKGKKVFAELAQELLDDANA 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C P+C C S++C Q
Sbjct: 180 GLYNQAIMEFGALQCVPVSPRCDICPASSICLAYAQ 215
>gi|311347986|gb|ADP90941.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348010|gb|ADP90961.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348052|gb|ADP90996.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
gi|311348208|gb|ADP91126.1| A/G-specific adenine DNA glycosylase [Homo sapiens]
Length = 549
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 100 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 159
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 160 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 219
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 220 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 279
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 280 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 311
>gi|261494678|ref|ZP_05991158.1| A/G-specific adenine glycosylase [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261309643|gb|EEY10866.1| A/G-specific adenine glycosylase [Mannheimia haemolytica serotype
A2 str. OVINE]
Length = 381
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 8/205 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F ++ + + ++ ++ Q+ V E T +
Sbjct: 19 AKAVLAWF-EQYGRKHLPWQQNKTLYQVWLSEVMLQQTQVATVIPYFARFMERFPTVIDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + +EF + P + + L G+GR A
Sbjct: 78 ANASIDEVLHLWTGLGYYA-RARNLHKAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWL 198
ILS P +D ++ R+ +R G K VE L ++ P + + +
Sbjct: 137 ILSSVLDAPHPILDGNVKRVLSRYFAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G +C KP+C C + CK
Sbjct: 197 MDLGAMICTRTKPKCLLCPLQENCK 221
>gi|212636435|ref|YP_002312960.1| A/G-specific adenine glycosylase MutY [Shewanella piezotolerans
WP3]
gi|212557919|gb|ACJ30373.1| A/G-specific adenine glycosylase MutY [Shewanella piezotolerans
WP3]
Length = 367
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 17 GCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ TP + + + +L + + + ++ ++ Q+ V +
Sbjct: 12 APMKTPAPFSQ---RIISWYDLHGRKQLPWQQNKTPYKVWISEIMLQQTQVATVIPYFEK 68
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + + + ++ ++ +G Y ++ N+ + ++ P E +
Sbjct: 69 FISRFPSIEILAGAEQDEVLHHWTGLGYYA-RARNLHKAAQQIVALHQGSFPVDFEDVLS 127
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIP 187
LPGIGR A +LS++ G+ +D ++ R+ R G G K VE L + P
Sbjct: 128 LPGIGRSTAGAVLSLSLGLNHPILDGNVKRVLARHGAIDGWPGKKLVENQLWQLTEALTP 187
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
K + + ++ G VC KP C +C ++ CK
Sbjct: 188 AKEIHKYNQAMMDIGATVCTRTKPNCAACPVAIDCKA 224
>gi|224476925|ref|YP_002634531.1| putative A/G-specific adenine glycosylase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222421532|emb|CAL28346.1| putative A/G-specific adenine glycosylase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 352
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ P +E + + E+ + N + + ++ ++ Q+ V E
Sbjct: 1 MLHPDTFKE---NLLDWFKINQREMPWRETTNPYYIWISEVMLQQTQVKTVIDYYHRFTE 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +++ + ++ Y +G Y ++ N + + + K+P + E +L G
Sbjct: 58 RFPTVEELSKANQDEVLKYWEGLGYYS-RARNFHTAIQEVAESYQGKVPDSPELFEKLKG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL-RIIP--PKHQ 191
+G ++S+AF +P VD ++FR+ +R+ T + ++ ++P
Sbjct: 117 VGPYTKAAVMSIAFDLPLPTVDGNVFRVWSRLNNDFSDTAKQSTRKAFEAELLPYVESEA 176
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G +C + P C C + + C+ +Q
Sbjct: 177 GQFNQAMMELGALICTPKSPLCLFCPVQSHCEAFQQ 212
>gi|254881517|ref|ZP_05254227.1| A/G-specific adenine glycosylase [Bacteroides sp. 4_3_47FAA]
gi|254834310|gb|EET14619.1| A/G-specific adenine glycosylase [Bacteroides sp. 4_3_47FAA]
Length = 352
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 11/206 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + N + + ++ ++ Q+ V +
Sbjct: 1 MENFSRKLIDWYRENGRDLPWRRTKNPYLIWISEIILQQTRVVQGYDYYQRFVARFPDVF 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P T G+ L G+G A
Sbjct: 61 ALAAADEDEVMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYTGVRALKGVGEYTA 117
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + +
Sbjct: 118 AAICSFAYGMPYAVVDGNVYRVLSRWLGIDTPIDSAEGKKLFVRVADELLDRERPGLYNQ 177
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P C C +++ C
Sbjct: 178 AIMDFGALQCTPVAPDCLFCPLNDSC 203
>gi|169825913|ref|YP_001696071.1| A/G-specific adenine DNA glycosylase [Lysinibacillus sphaericus
C3-41]
gi|168990401|gb|ACA37941.1| A/G-specific adenine DNA glycosylase [Lysinibacillus sphaericus
C3-41]
Length = 347
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + + + K +L + + + + V+ ++ Q+ V E T
Sbjct: 6 VTEFRHSLVEWFNAEKRDLPWRHTTDPYKIWVSEVMLQQTRVDTVIPYYNRFMESFPTLD 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + L + +G Y + N+ + + ++ + +P +++L G+G A
Sbjct: 66 LLAEAPQDYLLKHWEGLGYYS-RVRNLQAGAREVLENYGGVVPDNRHEISKLKGVGPYTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
ILS+A+ P VD ++ R+ +R+ +A KT E ++ +I P + + +
Sbjct: 125 GAILSIAYNKPEHAVDGNVMRVLSRVLNINEDIAVPKTKKIFEAAVEELIDPTNASSFNQ 184
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C P+C C + C +
Sbjct: 185 GLMELGALICTPTSPKCLLCPVREYCTAFNE 215
>gi|255261658|ref|ZP_05341000.1| A/G-specific adenine glycosylase [Thalassiobium sp. R2A62]
gi|255103993|gb|EET46667.1| A/G-specific adenine glycosylase [Thalassiobium sp. R2A62]
Length = 352
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 79/208 (37%), Gaps = 16/208 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + + + + ++ ++ Q+T V + T
Sbjct: 10 LLAWYDLHARGMPWRVMPADRAAGVQPDPYRIWMSEVMLQQTTVAAVKEYFLRFTNRWPT 69
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N++ + ++ E P T +GL LPGIG
Sbjct: 70 VSDLANAADADVMGEWAGLGYYA-RARNLLKCARVIAAEHGGVFPNTYDGLIALPGIGPY 128
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A+ I S+A+ +P +D ++ R+ +R+ P ++ + + P + +
Sbjct: 129 TASAISSIAYDLPETVLDGNVERVMSRLYDIHTPLPAAKPELMTHAVALTPQQRAGDYAQ 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C + P C C + CK
Sbjct: 189 AVMDLGATICTPKSPACGICPWRDPCKA 216
>gi|149185053|ref|ZP_01863370.1| endonuclease III [Erythrobacter sp. SD-21]
gi|148831164|gb|EDL49598.1| endonuclease III [Erythrobacter sp. SD-21]
Length = 215
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPS----PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + E+EE++ + + P KG + F ++ +LSAQS D N +A + LF
Sbjct: 1 MLSADEVEEVYRTLAREMPGRTRGAKGPKGQPDAFRSCISCILSAQSLDRNTARAARALF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+A TP+ ML + + + I+ G+Y K+ +I L+ E +P T EGL RLP
Sbjct: 61 ALATTPEAMLELDDSAIAAAIKPCGLYNTKTRSIRRFCEALLAEHGGVVPDTREGLMRLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GIGRK A+++LS FG I VDTH+ R+ NRIGL KT K L P +
Sbjct: 121 GIGRKCADIVLSFTFGKDVIAVDTHVHRVCNRIGLTAAKTAEKTAAQLDERSPEWALGDG 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H+WLV G+ +C AR P+CQ+C + +LC+
Sbjct: 181 HFWLVQFGKRICTARAPKCQTCPVGSLCEAY 211
>gi|262380599|ref|ZP_06073753.1| A/G-specific adenine glycosylase [Acinetobacter radioresistens
SH164]
gi|262298045|gb|EEY85960.1| A/G-specific adenine glycosylase [Acinetobacter radioresistens
SH164]
Length = 348
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 12/205 (5%)
Query: 32 FSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + + + V+ ++ Q+ V + + T +
Sbjct: 15 LLEWFDVHGRHDLPWQVSDDPYKVWVSEIMLQQTQVKTVLQYFDRFIQRFPTVNDLGLAS 74
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ Y +G Y + + I + K P +L+G LPGIGR A ++S+
Sbjct: 75 WDEVAPYWAGLGYYARARNLHKAA---EIVSREGKFPDSLDGWIALPGIGRSTAGALMSL 131
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ +D ++ R+ R L+ ++ + + P + ++ ++ G
Sbjct: 132 GLRQYGVIMDGNVKRVLARFFAIEEDLSQPAQERRLWKLAEELCPTERNHDYTQAIMDLG 191
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C +KP C C + C +Q
Sbjct: 192 ATICTPKKPLCLYCPMQEHCLAHQQ 216
>gi|254283196|ref|ZP_04958164.1| A/G-specific adenine glycosylase [gamma proteobacterium NOR51-B]
gi|219679399|gb|EED35748.1| A/G-specific adenine glycosylase [gamma proteobacterium NOR51-B]
Length = 363
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 10/210 (4%)
Query: 26 EEIFYLFSLKWPSP-KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + + + ++ ++ Q+ V + T +
Sbjct: 9 RTLASRLLNWFDDHGRKDLPWQTDTTPYRVWISEIMLQQTQVATVIPYYERFMGEFPTVE 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E + +G Y ++ N+ + ++ + + P T++GL LPGIGR A
Sbjct: 69 ALSAAPEDDVLKLWSGLGYYA-RARNLHRGAKMVTGDLGGEFPDTVDGLCTLPGIGRSTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I+S+A G +D ++ R+ R G ++ P +
Sbjct: 128 GAIISIAMGGRAPILDGNVKRVLARHHAVDGWPGKSGVAAELWGHAEAHTPNTRVADYTQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C R+PQC C + + C +
Sbjct: 188 AIMDLGATLCTRRRPQCLVCPLVDTCHAGR 217
>gi|319892907|ref|YP_004149782.1| A/G-specific adenine glycosylase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162603|gb|ADV06146.1| A/G-specific adenine glycosylase [Staphylococcus pseudintermedius
HKU10-03]
Length = 348
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 80/203 (39%), Gaps = 8/203 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + ++ + N + + ++ ++ Q+ V E T + + E
Sbjct: 11 LLEWFEKEQRQMPWRETKNPYYIWISEVMLQQTQVDTVRDYYHRFVEAFPTIEDLANADE 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y ++ N + ++ D +PQ E L G+G ++S+A
Sbjct: 71 DDVLKLWEGLGYYS-RARNFHIAAKEVVAFHDGSVPQHPETFLNLKGVGPYTQAAVMSIA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWLVLHGRY 204
F +P VD ++FR+ +R+ T + ++ + P + + + ++ G
Sbjct: 130 FDLPLATVDGNVFRVWSRLNDDTRDTALQSTRKAYENELAPYVAQQSGDFNQAMMELGAL 189
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC + P C C + C+ +Q
Sbjct: 190 VCTPKAPLCLFCPVQMHCESYEQ 212
>gi|226322489|ref|ZP_03798007.1| hypothetical protein COPCOM_00260 [Coprococcus comes ATCC 27758]
gi|225209106|gb|EEG91460.1| hypothetical protein COPCOM_00260 [Coprococcus comes ATCC 27758]
Length = 536
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + T +L E L + K +L + N + + V+ ++ Q+ V +
Sbjct: 184 VPVVLTNPQLYEAPELLVEWYRERKRDLPWRHHVNAYRVWVSEIMLQQTRVEAVKPFFER 243
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
T + + E KL +G Y + N+ + + E+ K P+ E +
Sbjct: 244 FMTELPTVKDLAEAPEDKLLKLWEGLGYYN-RVRNMQKAAQKIEEEYAGKFPENYEEIKA 302
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIP 187
LPGIG A I S A+GIP VD ++ R+ +R+ + K+E ++ +IP
Sbjct: 303 LPGIGNYTAGAISSFAYGIPKPAVDGNVLRVVSRLLASDEDIMKASVRTKIENAIEPVIP 362
Query: 188 PKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+ + L+ G VC +C+ C ++ +C+ +
Sbjct: 363 EDAASDFNQGLIEIGAIVCVPNGEAKCEICPLTGICEAKR 402
>gi|167967107|ref|ZP_02549384.1| adenine glycosylase mutY [Mycobacterium tuberculosis H37Ra]
Length = 467
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 140 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 200 ATVCTARTPRCGLCPL-DWC 218
>gi|332808831|ref|XP_001155767.2| PREDICTED: A/G-specific adenine DNA glycosylase isoform 8 [Pan
troglodytes]
Length = 549
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 100 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 159
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 160 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 219
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 220 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 279
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 280 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 311
>gi|15901090|ref|NP_345694.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae TIGR4]
gi|14972709|gb|AAK75334.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae TIGR4]
Length = 381
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 1 MWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLD 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L G
Sbjct: 61 WFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPKH 190
IG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 120 IGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 180 PGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 215
>gi|225018053|ref|ZP_03707245.1| hypothetical protein CLOSTMETH_01989 [Clostridium methylpentosum
DSM 5476]
gi|224949050|gb|EEG30259.1| hypothetical protein CLOSTMETH_01989 [Clostridium methylpentosum
DSM 5476]
Length = 365
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 89/218 (40%), Gaps = 14/218 (6%)
Query: 23 KELEEIFY----LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +E+ L + L + + + V+ ++ Q+ V +
Sbjct: 12 QQAQELLAQIPPLLLTWYDHSARILPWRQQPTPYRVWVSEIMLQQTRVSAVMPYYERFLS 71
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ L +G Y + N+ + ++ + ++P + E L +LPG
Sbjct: 72 ALPTVGALADAPEEVLLKLWEGLGYYN-RVRNMQKAARAVMEQHGGELPASFEELVKLPG 130
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKH 190
IG A + S+A+G+ VD ++ RI +R L + + +++P +
Sbjct: 131 IGEYTAGAVASIAYGLRVPAVDGNVLRILSRWLLSRADVTMPPVKRAYQALVQQMLPAER 190
Query: 191 QYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
+ + L+ G VC P C+SC ++ LC+ ++
Sbjct: 191 VGDFNQALMELGATVCLPNGDPLCESCPVAGLCRARER 228
>gi|325300027|ref|YP_004259944.1| A/G-specific adenine glycosylase [Bacteroides salanitronis DSM
18170]
gi|324319580|gb|ADY37471.1| A/G-specific adenine glycosylase [Bacteroides salanitronis DSM
18170]
Length = 374
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 11/215 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
K++ + K +L + + + + ++ ++ Q+ E
Sbjct: 19 KDKKMSRFGETLIRWYQENKRDLPWRDTKDPYKIWISEIILQQTRVAQGYDYYCRFVERF 78
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ E ++ Y + +G Y + + I P T E + L G+G
Sbjct: 79 PDVFSLARADEDEVMKYWQGLGYYSRARNLHEAARSIAARGAF---PDTYEEVRGLKGVG 135
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQY 192
A I S A+G+P VD +++R+ +R + GK ++
Sbjct: 136 DYTAAAICSFAYGMPCAVVDGNVYRVLSRWLGIEEPIDTGKGKKLFAALADELLERSAPA 195
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C P C C +++ C +++
Sbjct: 196 LYNQAIMDFGAVQCVPSSPSCLLCPLADSCAALQK 230
>gi|197336322|ref|YP_002155177.1| A/G-specific adenine glycosylase [Vibrio fischeri MJ11]
gi|197317812|gb|ACH67259.1| A/G-specific adenine glycosylase [Vibrio fischeri MJ11]
Length = 350
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 82/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + + ++ ++ Q+ V + T + +
Sbjct: 10 EWYDNYGRKTLPWQLEKTPYKVWLSEIMLQQTQVTTVIPYFERFMARFPTIVDLAHAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ +++ P ++ + LPGIGR A +LS++
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKTAQIIAEQYNGVFPTNIDDVIALPGIGRSTAGAVLSLSL 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRY 204
+D ++ R +R G K VE + P + + ++ G
Sbjct: 129 QQHHPILDGNVKRTLSRCFAIEGWPGKKSVENEMWAVAETHTPKQGVERYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC KP+C+ C +++LC+
Sbjct: 189 VCTRSKPKCELCPVNDLCQA 208
>gi|56205987|emb|CAI21717.1| mutY homolog (E. coli) [Homo sapiens]
Length = 546
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 16/212 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 97 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 156
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 157 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 216
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 217 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 276
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 277 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 308
>gi|83950886|ref|ZP_00959619.1| A/G-specific adenine glycosylase [Roseovarius nubinhibens ISM]
gi|83838785|gb|EAP78081.1| A/G-specific adenine glycosylase [Roseovarius nubinhibens ISM]
Length = 353
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +L + + + + ++ ++ Q+T V + +
Sbjct: 10 LLDWYDAHARDLPWRVSPADRSAGVRPDPYRIWLSEIMLQQTTVAAVKSYFERFTTLWPD 69
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + + +G Y ++ N++ + ++ + + PQT GL LPGIG
Sbjct: 70 VAALAAAEDADVMAEWAGLGYYA-RARNLLKCARAVVADHGGRFPQTRAGLQALPGIGPY 128
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHY 196
+ I ++A+ +P VD ++ R+ R+ P + + P +
Sbjct: 129 TSAAISAIAYDLPETVVDGNVERVMARLHDLHTPLPEAKPALTALADALTPQTRPGDYAQ 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 189 AVMDLGATICTPRSPACGICPWRAPC 214
>gi|94967835|ref|YP_589883.1| A/G-specific DNA glycosylase [Candidatus Koribacter versatilis
Ellin345]
gi|94549885|gb|ABF39809.1| A/G-specific DNA glycosylase [Candidatus Koribacter versatilis
Ellin345]
Length = 324
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 83/203 (40%), Gaps = 5/203 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++ + + L + + + + ++ ++ Q+ V
Sbjct: 11 DASDLQKSLLSWYRHSRRNLPWRRTRDPYAIWISEIMLQQTRVAAVLDKYAQFLAQFPNV 70
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++ +G YR ++ + + ++++ K P T G +LPGIGR
Sbjct: 71 KALADASLDEVLTVWSGLGYYR-RARALHQAAQMVVHHLHGKFPDTAAGWRQLPGIGRYT 129
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ I S+AF P VD ++ R+ R+ + E++ +++ + + + ++
Sbjct: 130 SAAIASIAFNEPAAVVDGNVERVLERLDGERHEGERLWERA-EQLLAKRAPGDWNQAMME 188
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G +C + PQC C ++ CK
Sbjct: 189 LGATICLPQNPQCLVCPVNGPCK 211
>gi|16124632|ref|NP_419196.1| A/G-specific adenine glycosylase [Caulobacter crescentus CB15]
gi|221233320|ref|YP_002515756.1| A/G-specific adenine DNA glycosylase [Caulobacter crescentus
NA1000]
gi|13421532|gb|AAK22364.1| A/G-specific adenine glycosylase [Caulobacter crescentus CB15]
gi|220962492|gb|ACL93848.1| A/G-specific adenine DNA glycosylase [Caulobacter crescentus
NA1000]
Length = 349
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 86/218 (39%), Gaps = 16/218 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKAT 70
K+ + + + + +L + + + + ++ ++ Q+T +
Sbjct: 2 KDRDALRSALLAWYDAQARDLAWRVGPAERRAGVRSDPYRVWLSEVMLQQTTVPHATPYF 61
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ T + A+ + L +G Y ++ N+++ + + N+ P T EGL
Sbjct: 62 LSFTQRWPTVLDLAAVEDGDLMAAWAGLGYYA-RARNLLACARAVANDHGGVFPGTEEGL 120
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIP 187
LPG+G A + ++AF VD ++ R+ +R+ P+ +++ ++
Sbjct: 121 RALPGVGAYTAAAVAAIAFDRAANVVDGNVERVMSRLFAVEAPMPDSKPELKALAGDLVT 180
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ G VCK + P C C +S C
Sbjct: 181 DDRPGDWAQALMDLGATVCKPKGPLCDRCPVSLWCAAY 218
>gi|221134112|ref|ZP_03560417.1| A/G-specific adenine glycosylase [Glaciecola sp. HTCC2999]
Length = 375
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 74/184 (40%), Gaps = 6/184 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ +++ ++ ++ Q+ V + T + ++ + ++ +G Y ++
Sbjct: 28 SAYSVWISEIMLQQTQVTTVIPYFERFMRSFPTVNDLANAPQEDVLHHWTGLGYYA-RAR 86
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + + P E + LPGIGR A IL++A +D ++ R+ R
Sbjct: 87 NLHKAAQQIAEHHNGVFPTDFEEVLALPGIGRSTAGAILAIAEHQNHPILDGNVKRVLAR 146
Query: 167 IGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
G KVE L + P + + ++ G +C KP+C+ C + +
Sbjct: 147 FFAVEGWPGSKKVEDELWHFAGELTPSERIADYTQVMMDLGATLCTRSKPKCEVCPLQSR 206
Query: 222 CKRI 225
C
Sbjct: 207 CLAF 210
>gi|297206023|ref|ZP_06923418.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii
JV-V16]
gi|297149149|gb|EFH29447.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii
JV-V16]
Length = 218
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M+++ K+ + L +E ++ +P KGEL + N F L+ AV +SAQ
Sbjct: 1 MMTTAKNKQVSHD---EQLLNDEEALKVLNRILAMYPDAKGELNWDNVFHLVCAVAISAQ 57
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+TD VN+ T LF TP M K L+ I IG++R K++++ ++ IL+ FD
Sbjct: 58 TTDKMVNRVTPKLFSDYPTPADMAQADIKDLEADISKIGLFRSKAKHLKEMAQILVENFD 117
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVE 179
++P+ + L LPG+G K ANV+L+ A+G+P I VDTH+ RIS + + P P+++E
Sbjct: 118 GEVPKDKKLLMTLPGVGEKTANVVLAEAYGVPAIAVDTHVARISKKFKIVPENAKPHEIE 177
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
+ L I+P + H+ ++ GRY AR
Sbjct: 178 KRLEEILPKEQWIKTHHAMIFFGRYTMPAR 207
>gi|312865396|ref|ZP_07725623.1| A/G-specific adenine glycosylase [Streptococcus downei F0415]
gi|311098914|gb|EFQ57131.1| A/G-specific adenine glycosylase [Streptococcus downei F0415]
Length = 389
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 81/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ K +E + K +L + N + + V+ ++ Q+ V +
Sbjct: 14 MWDQKTIESFRRTLLAWYDQEKRDLPWRRTKNPYPIWVSEIMLQQTQVQTVIPYYERFLA 73
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + E++L +G Y + N+ + ++ F P+T E + L G
Sbjct: 74 WFPSIKDLAQAPEERLLKAWEGLGYYS-RVRNLQKGAQQVMRVFAGDFPKTYEEILSLQG 132
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ R + + + +I P+
Sbjct: 133 IGPYTAGAIASIAFDLPEPAVDGNVMRVLARLFEVDYDIGNPSNRKIFQAIMEELIDPER 192
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + A+ P+ + I
Sbjct: 193 PGDFNQALMDLGTDIESAKNPRPEESPIRAF 223
>gi|163733086|ref|ZP_02140530.1| A/G-specific adenine glycosylase, putative [Roseobacter litoralis
Och 149]
gi|161393621|gb|EDQ17946.1| A/G-specific adenine glycosylase, putative [Roseobacter litoralis
Och 149]
Length = 355
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 75/190 (39%), Gaps = 6/190 (3%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + + + ++ ++ Q+T V + T + + A + +
Sbjct: 32 PQNRRAGQMPDPYRIWLSEVMLQQTTVATVKSYFEKFTTRWPTVRDLAAAKDADVMAEWA 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N++ + ++ ++ P L +LPGIG A I S+AF + +
Sbjct: 92 GLGYYA-RARNLLKCARTVVQDYGGAFPADHAELLKLPGIGPYTAAAIASIAFDLRQTVL 150
Query: 157 DTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
D ++ R+ R+ P +E++ + P + ++ G +C + P
Sbjct: 151 DGNVERVMARLHDVHVPLPASKPILMEKAD-ALTPADRPGDYAQAVMDLGATICTPKSPA 209
Query: 213 CQSCIISNLC 222
C C + C
Sbjct: 210 CGICPWRDPC 219
>gi|160944974|ref|ZP_02092200.1| hypothetical protein FAEPRAM212_02489 [Faecalibacterium prausnitzii
M21/2]
gi|158442705|gb|EDP19710.1| hypothetical protein FAEPRAM212_02489 [Faecalibacterium prausnitzii
M21/2]
Length = 347
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 10/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E I + + L + + + ++ ++ Q+ V E
Sbjct: 1 MENISPALLDWFYKNRRSLPFREDPTPYHVWLSEVMLQQTRVSAVLPYYYRFLEELPDIP 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A GE++L +G Y + N+ + ++ ++ ++P L LPGIG A
Sbjct: 61 ALAACGEERLHKLWEGLGYYS-RVRNLQKAAKLVCAQYGGQLPADYAALLALPGIGEYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S++FG+P VD ++ R+ +R+ + ++ PP+ + +
Sbjct: 120 GAIASISFGLPVPAVDGNVLRVFSRLYNDPGVITEPTVKKAFTARVMEHQPPEKAGDYNQ 179
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
L+ G VC P C C ++ +C+
Sbjct: 180 ALMELGALVCVPNGAPLCGQCPLAEVCRA 208
>gi|300780452|ref|ZP_07090308.1| A/G-specific DNA glycosylase [Corynebacterium genitalium ATCC
33030]
gi|300534562|gb|EFK55621.1| A/G-specific DNA glycosylase [Corynebacterium genitalium ATCC
33030]
Length = 335
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 7/195 (3%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + ++++ ++S Q+ V + TP + A
Sbjct: 58 EWFRANARDLPWREPGTSPWGVLLSEVMSQQTPVARVAPQWREWMRRWPTPADLAAAPTS 117
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ T+G R+ + + L++ + ++P ++ L LPGIG A + AF
Sbjct: 118 EVLRAWGTLGYPRRALR-LQECAASLVDVHNGQVPSAVDKLLALPGIGDYTARAVACFAF 176
Query: 150 GIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSL-LRIIPPKHQYNAHYWLVLHGRYVCK 207
G VDT++ R+ R L P K E ++P L+ G VC
Sbjct: 177 GQAVPVVDTNVRRVYARAELGRPVAKPQKAELEWVAELLPDTDADVFSAGLMELGALVCT 236
Query: 208 ARKPQCQSCIISNLC 222
A P C+SC + + C
Sbjct: 237 ATNPACESCPLISDC 251
>gi|51597534|ref|YP_071725.1| adenine DNA glycosylase [Yersinia pseudotuberculosis IP 32953]
gi|51590816|emb|CAH22462.1| A/G-specific adenine glycosylase [Yersinia pseudotuberculosis IP
32953]
Length = 371
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + Q + A ++ + +G Y ++
Sbjct: 28 KTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPDIQALAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P T + + LPGIGR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQMVVEHHQGEFPTTFDQILALPGIGRSTAGAILSLSLGQHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K + Q + P + ++ G VC KP+C+ C ++
Sbjct: 147 RCYAVDGWPGKKEVEGRLWQISEDVTPANRVGQFNQAMMDLGAMVCTRSKPKCELCPLNI 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCMAY 211
>gi|150006581|ref|YP_001301325.1| A/G-specific adenine glycosylase [Bacteroides vulgatus ATCC 8482]
gi|294775458|ref|ZP_06740971.1| A/G-specific adenine glycosylase [Bacteroides vulgatus PC510]
gi|149935005|gb|ABR41703.1| A/G-specific adenine glycosylase [Bacteroides vulgatus ATCC 8482]
gi|294450699|gb|EFG19186.1| A/G-specific adenine glycosylase [Bacteroides vulgatus PC510]
Length = 352
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 11/206 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + N + + ++ ++ Q+ V +
Sbjct: 1 MENFSRKLIDWYRENGRDLPWRRTKNPYLIWISEIILQQTRVVQGYDYYQRFVARFPDVF 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P T G+ L G+G A
Sbjct: 61 ALAAADEDEVMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYTGVRALKGVGEYTA 117
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + +
Sbjct: 118 AAICSFAYGMPYAVVDGNVYRVLSRWLGIDTPIDSAEGKKLFVRVADELLDRERPGLYNQ 177
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P C C +++ C
Sbjct: 178 AIMDFGALQCTPVAPDCLFCPLNDSC 203
>gi|295693029|ref|YP_003601639.1| endonuclease iii [Lactobacillus crispatus ST1]
gi|295031135|emb|CBL50614.1| Endonuclease III [Lactobacillus crispatus ST1]
Length = 209
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + +E + +P +GEL + +F L+ AV+LSAQ+TD VN+ ++
Sbjct: 5 VLSDEEARRVLKKILALYPDAQGELQWDTNFHLLCAVMLSAQTTDKMVNRVMPSFSKMFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG++R K++++ + + IL+++++ ++P+ + L LPG+G
Sbjct: 65 TPEVLAKAPIEEIEHEIKTIGLFRSKAKHLKATAQILVDKYNGQVPKDKKLLMTLPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +G+P I VDTH+ RIS + + K TP++VE+ L I+P H+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDDKATPHEVEKRLEAILPKSEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY AR
Sbjct: 185 MILFGRYTMPAR 196
>gi|260574054|ref|ZP_05842059.1| HhH-GPD family protein [Rhodobacter sp. SW2]
gi|259023520|gb|EEW26811.1| HhH-GPD family protein [Rhodobacter sp. SW2]
Length = 349
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L + + + + ++ ++ Q+T V
Sbjct: 13 LLAWYDRAARVLPWRVSPGDRALGVRPDPYRVWLSEVMLQQTTVAAVQGYFHRFTTRWPD 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + ++ +G Y ++ N+++ + ++ + + P E L LPGIG
Sbjct: 73 VAALAAAADAEVMAEWAGLGYYA-RARNLLACARAVVADHGGQFPSRREALQALPGIGPY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL---LRIIPPKHQYNAHY 196
A I ++A + VD ++ R+ R+ P P + + P +
Sbjct: 132 TAAAIAAIAHDAAEVVVDGNVERVMARLFAHPEPMPAAKPALIGLAAQFTPRLRPGDHAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C ++ C
Sbjct: 192 AVMDLGATICTPRNPTCPDCPLAEFC 217
>gi|225869847|ref|YP_002745794.1| A/G-specific adenine glycosylase [Streptococcus equi subsp. equi
4047]
gi|225699251|emb|CAW92559.1| putative A/G-specific adenine glycosylase [Streptococcus equi
subsp. equi 4047]
Length = 382
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 83/216 (38%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + + + + V+ ++ Q+ V V + +
Sbjct: 11 MWDQDTIASFRRTLLAWYDQEKRDLPWRRTKDPYHIWVSEIMLQQTQVVTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + ++ +F P + +T+L G
Sbjct: 71 WFPTVEALACADEERLLKAWEGLGYYS-RVRNMQKAAQQIMTDFGGIFPSSHADITKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEINYDIGDPKNRKIFQAVMEVLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + A+ P+ + C +
Sbjct: 190 PGDFNQALMDLGTDIEAAKNPRPDESPVRFFCAAYR 225
>gi|171779253|ref|ZP_02920224.1| hypothetical protein STRINF_01101 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282309|gb|EDT47736.1| hypothetical protein STRINF_01101 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 382
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + K +L + N + + ++ ++ Q+ V V + +
Sbjct: 11 MWDDEKIASFRRTLLNWYDNEKRDLPWRRTKNPYFIWISEIMLQQTQVVTVIPYYERFLK 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E KL +G Y + N+ + ++ +FD P + + L G
Sbjct: 71 WFPTIEDLANAPEDKLLKAWEGLGYYS-RVRNMQKAAQEIMVKFDGVFPDNHKDILSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+ VD ++ R+ + K + + +I P+
Sbjct: 130 IGPYTAGAISSIAFGLAEPAVDGNVMRVMARLFEVNYDIGEPKNRKIFQAIMEILIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPDESPIR 218
>gi|332259270|ref|XP_003278710.1| PREDICTED: LOW QUALITY PROTEIN: A/G-specific adenine DNA
glycosylase-like [Nomascus leucogenys]
Length = 526
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 15/207 (7%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 86 LLSWYDQAKRDLPWRRRAEDEVDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTL 145
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 146 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 205
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A I S+AFG H R A G +Q ++ P + + +
Sbjct: 206 AGAIASIAFGPGDPTAQPHFVRAQPPFLPAQGXLWGLAQQ----LVDPARPGDFNQAAME 261
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC ++P C C + +LC+ ++
Sbjct: 262 LGATVCTPQRPLCSQCPVESLCRARQR 288
>gi|24374879|ref|NP_718922.1| A/G-specific adenine glycosylase [Shewanella oneidensis MR-1]
gi|24349580|gb|AAN56366.1|AE015774_1 A/G-specific adenine glycosylase [Shewanella oneidensis MR-1]
Length = 365
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + V+ ++ Q+ V + + +
Sbjct: 10 RIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +E+ + P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K + Q ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAVDCKA 211
>gi|240140365|ref|YP_002964844.1| putative Endonuclease III (DNA-(apurinic or apyrimidinic site)
lyase) [Methylobacterium extorquens AM1]
gi|240010341|gb|ACS41567.1| putative Endonuclease III (DNA-(apurinic or apyrimidinic site)
lyase) [Methylobacterium extorquens AM1]
Length = 238
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--------PSPKGELYYVNHFTLIVA 54
S ++ S + +P+ ++L+ + + S + P L F +V+
Sbjct: 6 SRSQNTSRRAAAPVAA---KRDLDATYGILSKTYTTFDQTDDPWMTNGLS-STPFKSLVS 61
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
V LS + V A L+E T +++ + + +L+ I+ + Y +K++N+ ++
Sbjct: 62 VCLSTMTITKRVVNAAVPLYEKVSTFEELRDLPDDELRRIIKPVAHYNRKTKNLKEMARQ 121
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+I ++ IP + L +L G+GRK +++++ F +I VDTH+ R+ NR+G+ +
Sbjct: 122 IIEDYGGSIPDNRDDLIKLQGVGRKCVDILMNFTFSEDSIAVDTHVLRVLNRLGVVETTS 181
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + P +++ +AH WL+ HG +C AR P+C C ++ C
Sbjct: 182 AKQAADLINAQTPARYKRHAHEWLIQHGMKICVARTPKCADCPLTKHCDWY 232
>gi|160881486|ref|YP_001560454.1| A/G-specific adenine glycosylase [Clostridium phytofermentans ISDg]
gi|160430152|gb|ABX43715.1| A/G-specific adenine glycosylase [Clostridium phytofermentans ISDg]
Length = 350
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 10/213 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E + L + + + + ++ ++ Q+ V +
Sbjct: 2 KNDYRETVEYLLHWYDLNARILEWRSNPKPYYVWISEIMLQQTRVEAVKSYFDRFIKELP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + A+ E +L +G Y ++ N+ + I++ +++ ++P E L +LPGIG
Sbjct: 62 TIKDLAAVEEDRLMKLWEGLGYYN-RARNLKKAAIIVMEQYNGELPANREELKKLPGIGS 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
+ I S+AF +P VD ++ R+ + + K ++E+ + IIP +
Sbjct: 121 YTSGAIGSIAFQLPVAAVDGNVLRVMKRIAGSFDDITKEKVKKELEEDIEAIIPKDRPGD 180
Query: 194 AHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRI 225
+ L+ G VC KP C C + +LCK
Sbjct: 181 YNQSLMELGATVCLPNGKPLCNQCPVMHLCKAF 213
>gi|89070020|ref|ZP_01157351.1| A/G-specific adenine glycosylase [Oceanicola granulosus HTCC2516]
gi|89044357|gb|EAR50495.1| A/G-specific adenine glycosylase [Oceanicola granulosus HTCC2516]
Length = 346
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 79/208 (37%), Gaps = 16/208 (7%)
Query: 30 YLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ +L + + + + ++ ++ Q+T V + E
Sbjct: 3 RDLLDWYDVHARQLPWRVPPAARRAGVRPDPYRVWLSEVMLQQTTVPAVKGYFRRFTETW 62
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + A + + +G Y ++ N++ + ++ E + P+T EGL LPGIG
Sbjct: 63 PTVEALAAAEDGAVMEAWAGLGYYA-RARNLLKCARAVVAEHGGRFPETAEGLRELPGIG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNA 194
+ I ++A+ P VD ++ R+ R+ P ++ + P +
Sbjct: 122 PYTSAAIAAIAYDAPATVVDGNVERVMARLHDVHTPLPAAKGELTALAAALTPEARPGDY 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C C
Sbjct: 182 AQAVMDLGATICTPRRPACGICPWRTPC 209
>gi|319786794|ref|YP_004146269.1| A/G-specific adenine glycosylase [Pseudoxanthomonas suwonensis
11-1]
gi|317465306|gb|ADV27038.1| A/G-specific adenine glycosylase [Pseudoxanthomonas suwonensis
11-1]
Length = 353
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 83/220 (37%), Gaps = 13/220 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + +L + + + ++ ++ Q+ V E
Sbjct: 1 MAADTADRFVAPLLDWFDRHGRHDLPWQHPRTPYRVWLSEIMLQQTQVATVIPYFLRFVE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + A ++ + +G Y ++ N+ + + + + +P+ L+ L LPG
Sbjct: 61 SFPTLPDLAAASTDQVMAHWAGLGYYA-RARNLHAAARRCVEQHGGDLPRDLDALLALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL-------RIIP 187
IGR A ILS A+G P +D ++ R+ R G VE+ + R +P
Sbjct: 120 IGRSTAGAILSQAWGDPFPILDGNVKRVFARWHGIHGWPGTPAVEKQMWGLANQHVRHVP 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + G C P C +C +++ C +++
Sbjct: 180 AGRLADYTQAQMDFGATQCTRAAPACLTCPLADGCVALRE 219
>gi|167754044|ref|ZP_02426171.1| hypothetical protein ALIPUT_02332 [Alistipes putredinis DSM 17216]
gi|167658669|gb|EDS02799.1| hypothetical protein ALIPUT_02332 [Alistipes putredinis DSM 17216]
Length = 358
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 75/207 (36%), Gaps = 9/207 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E+ + +L + + + + ++ ++ Q+ E+ +
Sbjct: 13 EVASRLLEWYGREGRDLPWRRTRDPYRIWISEVILQQTRVAQGMSYYHRFLELFPDVAAL 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ E + + +G Y ++ N+++ + ++ P + LPG+G A
Sbjct: 73 ASAPEDLVLKCWQGLGYYS-RARNLLAAARRIVETHGGVFPTAYADVRALPGVGDYTAAA 131
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
I S+A+ P +D ++FR+ +R+ + +I + + +
Sbjct: 132 ICSIAYEEPCAALDGNVFRVLSRLYDLDTPIDTTSGRRTFAALADSLIDRQRPGLYNQAI 191
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G C +P+C C + + C
Sbjct: 192 MDFGALCCLPAQPRCTECPLRDRCLAF 218
>gi|317968509|ref|ZP_07969899.1| A/G-specific adenine glycosylase [Synechococcus sp. CB0205]
Length = 384
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 13/201 (6%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+WP P ++N +A ++ Q+ V E T + E+++
Sbjct: 32 RWPEPH---EHLNVLECWIAEVMLQQTQLQVVLPYWTRWMERFPTVLALAEADEQEILLL 88
Query: 95 IRTIGIYRKKSENIISLSHILINEF-------DNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G Y + L ++ P+ LE LPGIG A ILS
Sbjct: 89 WQGLGYYSRARRLHQGAQQFLRTYGKGLSDDAFDRWPRDLESWLALPGIGPSTAGSILSS 148
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL---LRIIPPKHQYNAHYWLVLHGRY 204
AF +P +D ++ R+ +R+ + ++ +++ + N + L+ G
Sbjct: 149 AFDLPFPILDGNVKRVLSRLSASSTPPARNSKELWVLSEQLLSREQPRNFNQALMDLGAT 208
Query: 205 VCKARKPQCQSCIISNLCKRI 225
VC + P CQ C S C
Sbjct: 209 VCTPKNPSCQQCPWSEQCAAY 229
>gi|292491040|ref|YP_003526479.1| A/G-specific adenine glycosylase [Nitrosococcus halophilus Nc4]
gi|291579635|gb|ADE14092.1| A/G-specific adenine glycosylase [Nitrosococcus halophilus Nc4]
Length = 354
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + +L + + + ++ ++ Q+ V + + +
Sbjct: 8 QRLLTWFDAHGRQDLPWKHNPTPYRVWISEIMLQQTQVATVIPYYQRFIKRFPELPALAQ 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G Y ++ N+ + + ++P TLE L LPGIGR A IL
Sbjct: 68 ASVDEVLGLWTGLGYYA-RARNLHRAAQLTWESHGGELPTTLEALIELPGIGRSTAGAIL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVL 200
++A G +D ++ R+ R P KVE+ L ++P + ++
Sbjct: 127 ALALGQRHPILDGNVKRVLARQEAIPEWPGQPKVEKQLWQRSEELLPQTRVADYTQAIMD 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC R P+C SC + C+ Q
Sbjct: 187 LGATVCTRRHPRCPSCPVKKTCRAHAQ 213
>gi|241191362|ref|YP_002968756.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196768|ref|YP_002970323.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|240249754|gb|ACS46694.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251322|gb|ACS48261.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794355|gb|ADG33890.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis V9]
Length = 329
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI-------FYLFSLKWPSPKGELYYV----NHFTLIVA 54
KS +P + + E+ + W + +L + + ++V
Sbjct: 13 KSRKRAQATPEQTVG-ERRARELERSARQALRELATWWQTSARDLPWRYGRTTPWGVLVC 71
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + + A + ++ +G R+ + + +
Sbjct: 72 EVMSQQTQMSRVVPYWEAWMSQWPDAASLAAAEKSEVIRAWGRLGYPRRALR-LQECAEV 130
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---AP 171
+ ++D+++P+ + L LP +G A+ +LS A+G +DT+I R +R L +
Sbjct: 131 VARDYDDRLPREYDELMALPSVGDYTASAVLSFAYGERVAVIDTNIRRALSRAFLGVESL 190
Query: 172 GKTPNKVEQS-LLRIIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G + +E++ ++P + + ++ G VC A+ PQC+ C + C+ +K
Sbjct: 191 GGSCTPLERALAWVVLPKAAEQSVLWNQAVMELGALVCTAKAPQCEQCPLQPQCEFVK 248
>gi|315925387|ref|ZP_07921598.1| A/G-specific adenine glycosylase [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621288|gb|EFV01258.1| A/G-specific adenine glycosylase [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 377
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHL 73
P+ I + K L + + + + ++ +++ Q+ + +
Sbjct: 27 PERAS-IAKALLTWFAENKRNLPFRHADGQGRKDPYAIWISEIMAQQTQIDTLLPYYERF 85
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ A E + +G Y ++ N+ + + + F+ + P + L
Sbjct: 86 IHQFPDVAALAAAEEDAVLKTWEGLGYYS-RARNLRKAAQTIQSNFNGRFPAAYADILSL 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPP 188
PGIG A I S+AF +P VD ++ R+ I +A ++ + ++P
Sbjct: 145 PGIGPYTAGAIASIAFDLPVAAVDGNVMRVITRLADWSIDIAGSDAKKRIGAVVTDLMPE 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + + L+ G VC P C C + C+ +
Sbjct: 205 EAPGDFNEALMELGALVCTPNAPACLLCPWRDHCRAL 241
>gi|229818126|ref|ZP_04448408.1| hypothetical protein BIFANG_03418 [Bifidobacterium angulatum DSM
20098]
gi|229784730|gb|EEP20844.1| hypothetical protein BIFANG_03418 [Bifidobacterium angulatum DSM
20098]
Length = 301
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+I + W + +L + + + ++V+ ++S Q+ V E
Sbjct: 6 KNPNAADIALRLAAWWETAARDLPWRFGRASDWGVLVSEVMSQQTQMSRVVPYWTAWMER 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + + ++ +G R+ + + + ++DN++P T + L LPG+
Sbjct: 66 WPDARALAGAPKAEVITAWGRLGYPRRALR-LQECARTVAEQYDNQLPHTYDELLALPGV 124
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLR-IIPPKHQY 192
G A+ ++S AFG +DT+I R+ +R+ + G + VE+ R ++P +
Sbjct: 125 GDYTASAVMSFAFGERIAVIDTNIRRVISRVFRGEESFGGAASPVERETARRLLPEGERG 184
Query: 193 N--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C C I+ C ++
Sbjct: 185 AVVWNQSVMELGATVCTAKAPLCDRCPIAGQCVFLR 220
>gi|322834248|ref|YP_004214275.1| A/G-specific adenine glycosylase [Rahnella sp. Y9602]
gi|321169449|gb|ADW75148.1| A/G-specific adenine glycosylase [Rahnella sp. Y9602]
Length = 358
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 7/198 (3%)
Query: 34 LKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + ++ ++ Q+ V + E T + A ++
Sbjct: 22 QRYGRKTLPWQIAKTPYKVWLSEVMLQQTQVATVIPYFERFMERFPTVSDLAAAPLDEVL 81
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++++ P T + + LPGIGR A +LS+A
Sbjct: 82 HLWTGLGYYA-RARNLHKAAQTIVSQHSGVFPTTFDEILALPGIGRSTAGAVLSLALNQH 140
Query: 153 TIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ R G K E L I P + + ++ G VC
Sbjct: 141 YPILDGNVKRVLARCYAVDGWPGEKKTENKLWAISEDVTPAEGVAQFNQAMMDLGAMVCT 200
Query: 208 ARKPQCQSCIISNLCKRI 225
KP+C+ C + + C+
Sbjct: 201 RSKPKCELCPVKSGCEAY 218
>gi|256831730|ref|YP_003160457.1| HhH-GPD family protein [Jonesia denitrificans DSM 20603]
gi|256685261|gb|ACV08154.1| HhH-GPD family protein [Jonesia denitrificans DSM 20603]
Length = 311
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++E+ S + + +L + + ++V+ ++S Q+ V + + TP
Sbjct: 12 VDEVHAQLSAWFDGAERDLPWRRPGTTPWGVLVSEVMSQQTPVARVAPRWERWMTMWPTP 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
M A + T+G R+ + + ++ ++P T E L LPGIG
Sbjct: 72 AHMAAASRDVVLTEWGTLGYPRRALR-LHECARVITERHHGEVPATEEELRALPGIGSYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI------IPPKHQYNA 194
A I++ AF + +DT++ R+ R+ P + + + +
Sbjct: 131 AAAIVAFAFHRRAVVLDTNVRRVIARVFAGVALPPPSPRRHEWELADALAPLADQDAARW 190
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G VC AR P+C C I++LC
Sbjct: 191 AVASMEFGSLVCTARTPRCDQCPIAHLC 218
>gi|291522134|emb|CBK80427.1| A/G-specific adenine glycosylase [Coprococcus catus GD/7]
Length = 350
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
T + +E + + +L + N + + ++ ++ Q+ V + E
Sbjct: 1 MTEEVYKEAAQNVTAWYRQYGRDLPWRRTGNPYHIWISEIMLQQTQVDTVKPYYERFIEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E+++ +G YR+ S ++ + +++NE+ + P+T E L +L G+
Sbjct: 61 LPTVEDLAGADEQRVFKLWEGLGYYRRAS-HLKEAASMIVNEYHGRFPETYEELLKLKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A+ I S+AFGIP VD + RI R +A KT N + + +I
Sbjct: 120 GMYTASAIASIAFGIPKGVVDGNTLRIVARLFNREDNIALQKTKNAFGEIMDAMIRYAEP 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ + ++ G +C KP C C +++LC+
Sbjct: 180 SDFNQGMMDLGAMICTPSKPSCDECPVASLCQS 212
>gi|169627661|ref|YP_001701310.1| adenine glycosylase MutY [Mycobacterium abscessus ATCC 19977]
gi|169239628|emb|CAM60656.1| Probable adenine glycosylase (MutY) [Mycobacterium abscessus]
Length = 280
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 8/194 (4%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + ++++ ++ Q+ V + P M +
Sbjct: 3 WFDVAERDLPWRRPEATPWHILISEVMLQQTPVSRVEPVWREWVARWPVPSAMAKTSVAE 62
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G R+ + + +L ++D+++P +E L LPG+G A I +G
Sbjct: 63 VLRAWGKLGYPRRAMR-LHECATVLARDYDDQVPGDVETLLTLPGVGAYTARAIACFGYG 121
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVE--QSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
VDT++ R+ R+ + + ++P ++ L+ G VC A
Sbjct: 122 QRVPVVDTNVRRVIARVVHGVADSAPSARDLRDAEALLPTENGARFSAALMELGALVCTA 181
Query: 209 RKPQCQSCIISNLC 222
R PQC C +S+ C
Sbjct: 182 RTPQCPMCPLSS-C 194
>gi|88808233|ref|ZP_01123744.1| mutator mutT protein [Synechococcus sp. WH 7805]
gi|88788272|gb|EAR19428.1| mutator mutT protein [Synechococcus sp. WH 7805]
Length = 385
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 73/201 (36%), Gaps = 14/201 (6%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
WP P L + + ++VA ++ Q+ V E + E+ +
Sbjct: 37 LWPEPDDAL---DPYGVLVAEVMLQQTQLQVVLPYWTRWMERFPQLDTLAEADEQDVLLC 93
Query: 95 IRTIGIYRKKSENIISLSHILINE----FDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G Y + + ++ + P+ L+ LPGIGR A ILS AF
Sbjct: 94 WQGLGYYSRARRLNAAAGMLVAMGASGADPSGWPRALDSWLALPGIGRSTAGGILSSAFN 153
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP------PKHQYNAHYWLVLHGRY 204
P +D ++ R+ R+ A P + + P + + L+ G
Sbjct: 154 TPLAILDGNVRRVLARLQ-AHPTPPMRAQAQFWLWSEALIAAAPGRARDCNQALMDLGAT 212
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+C R P C C S+ C
Sbjct: 213 LCTPRNPSCGICPWSDHCAAY 233
>gi|300718254|ref|YP_003743057.1| A/G-specific adenine glycosylase [Erwinia billingiae Eb661]
gi|299064090|emb|CAX61210.1| A/G-specific adenine glycosylase [Erwinia billingiae Eb661]
Length = 362
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 80/211 (37%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAPQFSRQVLEWYQRFGRKTLPWQLEKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPE 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++ + +G Y ++ N+ + + + + PQT + + LPG+GR
Sbjct: 63 ISDLANAPLDEVLHLWTGLGYYA-RARNLHKAAKTVAEKHNGIFPQTFDEVMDLPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A +LS++ G +D ++ R+ R G +VE+ L I P +
Sbjct: 122 TAGAVLSLSLGQHYPILDGNVKRVLARCYAVSGWPGKKEVEKRLWEISEEVTPAEGVSQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 182 NQAMMDLGAMVCTRSKPKCEICPLNLGCIAY 212
>gi|281355644|ref|ZP_06242138.1| A/G-specific adenine glycosylase [Victivallis vadensis ATCC
BAA-548]
gi|281318524|gb|EFB02544.1| A/G-specific adenine glycosylase [Victivallis vadensis ATCC
BAA-548]
Length = 356
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 10/212 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ L+ I + L + + + ++ ++ Q+ V +
Sbjct: 1 MDSESLQAIVAPLLEWYDRHARILPWRESPEPYRVWISEIMLQQTRVEAVKPYYDRFLKE 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ E +L +G Y + N+ + ++++E+ + P+ +E L LPGI
Sbjct: 61 LPDLHALAEASEPQLLKLWEGLGYYN-RVRNLQKAARVIVSEYGGEFPRDVETLRSLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQ 191
G A I S++F P VD ++ R+ +R+ + + + +L ++ P
Sbjct: 120 GEYTAGAIASISFNRPEPAVDGNVLRVVSRLAASREDISSPKVKGAISDALRQVYPAGRC 179
Query: 192 YNAHYWLVLHGRYVCKAR-KPQCQSCIISNLC 222
+ L+ G VC P+C C ++ LC
Sbjct: 180 GDFTQSLMELGATVCLPNGAPRCAECPLAELC 211
>gi|148557583|ref|YP_001265165.1| A/G-specific DNA-adenine glycosylase [Sphingomonas wittichii RW1]
gi|148502773|gb|ABQ71027.1| A/G-specific DNA-adenine glycosylase [Sphingomonas wittichii RW1]
Length = 344
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ + + + L + + + + ++ ++ Q+T V
Sbjct: 3 VDAVPENLLAWYDAHHRRLPWRAAPGEAPTDPYRVWLSEIMLQQTTVAAVKPYFDRFTTR 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ N+I+ + + ++ + P + GL LPGI
Sbjct: 63 WPTVTDLARADEGEVMAAWAGLGYYA-RARNLIACARAVADDHGGRFPDSEAGLRALPGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYN 193
G A I ++AFG + VD ++ R+++R+ P + + RI P +
Sbjct: 122 GDYSAAAIAAIAFGRRAVVVDANVERVASRLFAFDEALPRARPALRALVDRITPDARAGD 181
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R PQC C +S C
Sbjct: 182 FAQAMMDLGSSICTVRAPQCLLCPLSAGC 210
>gi|148241202|ref|YP_001226359.1| A/G-specific DNA glycosylase [Synechococcus sp. RCC307]
gi|147849512|emb|CAK27006.1| A/G-specific DNA glycosylase [Synechococcus sp. RCC307]
Length = 386
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 73/204 (35%), Gaps = 13/204 (6%)
Query: 31 LFSLKWPSPKGELYYVNH------FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++S ++ + N + + +A ++ Q+ + + T +
Sbjct: 31 IWSEQFGRKAIPWKHANTSGLLDIYGIWIAEVMLQQTQLQVALPYWQRWMQALPTVDALA 90
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+++ + +G Y + + PQ LE LPGIGR A I
Sbjct: 91 AADEQQVLLLWQGLGYYSRARRLHQAA----QQLQGQPWPQDLEAWLALPGIGRSTAGSI 146
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL---LRIIPPKHQYNAHYWLVLH 201
LS AF P +D ++ R+ R+ +++ + + + L+
Sbjct: 147 LSSAFDRPFAILDGNVKRVLARLTAFEHPPARHSAHFWSLSEQLLDRQRPRDFNQALMDL 206
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G +C R+P C C + C
Sbjct: 207 GATLCTPRQPDCPRCPWQSHCSAY 230
>gi|126641074|ref|YP_001084058.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Acinetobacter baumannii ATCC 17978]
Length = 189
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 84/167 (50%), Positives = 123/167 (73%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+LSAQ+TDV+VNKAT L+ +A+T +K+ +G L+ YI+TIG+Y K+EN+I IL
Sbjct: 1 MLSAQATDVSVNKATDKLYPVANTAEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKIL 60
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ +F+ ++P + L LPG+GRK ANV+L+ AFG PT+ VDTHIFR+ NR GLA GK
Sbjct: 61 MEQFNGEVPSNRKDLEALPGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNV 120
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+VE L+++IP + +AH+WL+LHGRY C ARKP+C C+++++C
Sbjct: 121 LEVEHRLVKVIPKEFILDAHHWLILHGRYCCIARKPKCSECVVADVC 167
>gi|257462972|ref|ZP_05627376.1| A/G-specific adenine glycosylase [Fusobacterium sp. D12]
Length = 355
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 83/211 (39%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I + K +L + + ++ ++ Q+ V E T +
Sbjct: 1 MRNISKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFARFIEELPTIE 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL + +G Y ++ N+ + ++ + ++P + L +L GIG A
Sbjct: 61 ALANCEEEKLMKLWQGLGYYS-RARNLKKAACQIMENYGGELPAEKKELLQLAGIGPYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I S+A+G VD ++ R+ +R+ G K+E+ + +P + + +
Sbjct: 120 GAISSIAYGRKETAVDGNVIRVISRLFAVDGNVLEGKGRQKIEEIAYQELPEERAGDFNQ 179
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
L+ G +C C C + C+ +
Sbjct: 180 ALMDLGATICIPNGAALCHLCPLQLECQAYR 210
>gi|33864651|ref|NP_896210.1| putative adenine glycosylase [Synechococcus sp. WH 8102]
gi|33632174|emb|CAE06630.1| putative adenine glycosylase [Synechococcus sp. WH 8102]
Length = 380
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 72/194 (37%), Gaps = 10/194 (5%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+WP P ++N +A ++ Q+ V + ++ T + A ++++
Sbjct: 47 RWPEPH---EHLNVLECWIAEVMLQQTQLKVVLPYWQGWMKVFPTVDALAAASLEQVRLQ 103
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ +G Y + + P+ L+ LPGIGR A ILS F P
Sbjct: 104 WQGLGYYSRARRLHAA----AQRLAQGPWPRDLDSWMGLPGIGRTTAGSILSSGFNAPLA 159
Query: 155 GVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
+D ++ R+ R+ P + Q ++ P + + L+ G VC R P
Sbjct: 160 ILDGNVKRVLARLHAHPRPPAREQVLFWQWSEVLLDPARPRDFNQALMDLGATVCTPRNP 219
Query: 212 QCQSCIISNLCKRI 225
C C C
Sbjct: 220 DCGRCPWQFCCAAY 233
>gi|328957700|ref|YP_004375086.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Carnobacterium sp. 17-4]
gi|328674024|gb|AEB30070.1| A/G-specific adenine glycosylase or DNA-(apurinic or apyrimidinic
site) lyase [Carnobacterium sp. 17-4]
Length = 404
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + + + + V+ ++ Q+ V +
Sbjct: 20 PMWPQEKINRFRETLLSWYDLEKRDLPWRKNNDPYRIWVSEIMLQQTRVDTVIPYYLNFM 79
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + E L +G Y + N+ + + ++N++D ++P + + +L
Sbjct: 80 NTFPTIEALAHAHEDVLLKAWEGLGYYS-RVRNMQTAAQQIMNDYDGEMPTDPKEIGKLK 138
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPK 189
GIG I SMAFG+P VD ++ R+ +R+ +A E + +I P
Sbjct: 139 GIGPYTTGAISSMAFGLPEPAVDGNVMRVLSRLFEIDADIAKPGNRKIFEAIIRELIDPY 198
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + + G +C + + I + +
Sbjct: 199 KPGDFNQAFMDLGSSICTPKNYHPELSPIKEFNQSYQ 235
>gi|228472046|ref|ZP_04056814.1| A/G-specific adenine glycosylase [Capnocytophaga gingivalis ATCC
33624]
gi|228276658|gb|EEK15371.1| A/G-specific adenine glycosylase [Capnocytophaga gingivalis ATCC
33624]
Length = 347
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 9/214 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ EI L + + K EL + N + + ++ ++ Q+ + E
Sbjct: 2 KEQTTEIAVLLLTWYAAHKRELPWRGAGNPYYIWLSEVILQQTRVAQGLPYYQRFVEQFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E ++ + +G Y +++N+ + + E P T E L +L G+G
Sbjct: 62 TVEALAQAPEAQVLKVWQGLGYYS-RAKNLQRAAQYITEELQGVFPSTYETLLKLKGVGE 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYN 193
A+ I S+ + P VD +++R+ +RI ++ ++ +
Sbjct: 121 YTASAIASICYNEPKAVVDGNVYRVLSRIFDIDTPINTTEGAKYFKELAQELLDKERAGE 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G CK + P C+SCI+S C +
Sbjct: 181 YNQAIMDFGALQCKPQSPDCESCILSAKCLAYHR 214
>gi|311743342|ref|ZP_07717149.1| adenine glycosylase [Aeromicrobium marinum DSM 15272]
gi|311313410|gb|EFQ83320.1| adenine glycosylase [Aeromicrobium marinum DSM 15272]
Length = 293
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 8/211 (3%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+P ++ + + + +L + + + ++V+ L+ Q+ V V +
Sbjct: 4 SPTDVAALHTVLLDWFDRHARDLPWRRDPSPWPVLVSELMLQQTPVVRVLPVFEAWMLRW 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P + A + +G R+ + + + ++ + +P + L LPG+G
Sbjct: 64 PAPPDLAAEPAGEAVRAWGRLGYPRRALR-LHAAAVAIVEQHGGDVPADHDDLLALPGVG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYN 193
A + S AFG + +DT++ R+ R+ V + R+ +P +
Sbjct: 123 EYTAAAVASFAFGQRHVVLDTNVRRVLARVADGQQYPAPAVTAAERRLAGSVLPEVGAHR 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ G VC AR P+C C +++LC+
Sbjct: 183 WAAATMELGATVCTARSPRCGDCPVADLCRW 213
>gi|270293861|ref|ZP_06200063.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479303|ref|ZP_07938438.1| A/G-specific adenine glycosylase [Bacteroides sp. 4_1_36]
gi|270275328|gb|EFA21188.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904591|gb|EFV26410.1| A/G-specific adenine glycosylase [Bacteroides sp. 4_1_36]
Length = 346
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + + ++ ++ Q+ + + + A E
Sbjct: 8 LLDWYAENKRDLPWRNTTDPYLIWISEIILQQTRVAQGYEYFLRFIKRFPDVVSLAAASE 67
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ Y + +G Y + + P+T + L G+G A I S A
Sbjct: 68 DEVMKYWQGLGYYSRARNLHAAAKS-----MKGTFPKTYAEVRALKGVGDYTAAAICSFA 122
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ +P VD +++R+ +R + + ++ + + ++ G
Sbjct: 123 YDMPYAAVDGNVYRVLSRYFGIDVPIDSTEGKKTFTALAGEVLDKSRPADYNQAIMDFGA 182
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C + P C C +S C+ + +
Sbjct: 183 VQCTPQSPNCLFCPLSGSCRALSE 206
>gi|259418050|ref|ZP_05741969.1| A/G-specific adenine glycosylase [Silicibacter sp. TrichCH4B]
gi|259346956|gb|EEW58770.1| A/G-specific adenine glycosylase [Silicibacter sp. TrichCH4B]
Length = 353
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 17/214 (7%)
Query: 27 EIFYL-FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHL 73
EI + ++ + + + + ++ ++ Q+T V +
Sbjct: 9 EILSQDLLEWYDRHARQMPWRVGPEARAAGVRPDPYRIWLSEVMLQQTTVAAVKDYFERF 68
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
T + A + + +G Y ++ N++ + ++ ++ P T EGL L
Sbjct: 69 TRRWPTVSDLAAAADADVMAEWAGLGYYA-RARNLLKCARVVADDLSGVFPDTYEGLIAL 127
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSLLR-IIPPKH 190
PGIG A I ++AF P +D ++ R+ R+ P V + + P +
Sbjct: 128 PGIGPYTAAAISAIAFDRPETVLDGNVERVMARLHDEHAPLPGVKPVLKDHAAHLTPAQR 187
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C + P C C C+
Sbjct: 188 PGDYAQAVMDLGATICTPKSPACGICPWRTPCRA 221
>gi|124021885|ref|YP_001016192.1| adenine glycosylase [Prochlorococcus marinus str. MIT 9303]
gi|123962171|gb|ABM76927.1| probable adenine glycosylase [Prochlorococcus marinus str. MIT
9303]
Length = 400
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 10/194 (5%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+WP P L + + + +A ++ Q+ + + + T Q + A E+++
Sbjct: 59 RWPEPHEAL---SPYGIWIAEVMLQQTQLKVMRPYWQQWMVVLPTVQHLAAAEERQVLLL 115
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ +G Y + + + + +P +LE PGIGR A ILS A P
Sbjct: 116 WQGLGYYSRARRLHQAARQLAASP----LPSSLEAWQAFPGIGRTTAGSILSSALNRPVP 171
Query: 155 GVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
+D ++ R+ R+ Q ++ P + + L+ G VC R P
Sbjct: 172 ILDGNVRRVLARLHACLEPPHRAQASFWQWSEALLDPLRPRDFNQALMDLGALVCTPRTP 231
Query: 212 QCQSCIISNLCKRI 225
CQ C + C
Sbjct: 232 SCQLCPWQSSCAAY 245
>gi|304410084|ref|ZP_07391703.1| A/G-specific adenine glycosylase [Shewanella baltica OS183]
gi|307302204|ref|ZP_07581962.1| A/G-specific adenine glycosylase [Shewanella baltica BA175]
gi|304351493|gb|EFM15892.1| A/G-specific adenine glycosylase [Shewanella baltica OS183]
gi|306914242|gb|EFN44663.1| A/G-specific adenine glycosylase [Shewanella baltica BA175]
Length = 363
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ + + P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDNYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K VE L ++ P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEAQLWQLTDTYTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C +C ++ CK
Sbjct: 189 GASICTRSKPNCAACPVAIDCKA 211
>gi|330828253|ref|YP_004391205.1| A/G-specific adenine glycosylase MutY [Aeromonas veronii B565]
gi|328803389|gb|AEB48588.1| A/G-specific adenine glycosylase MutY [Aeromonas veronii B565]
Length = 350
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 10/202 (4%)
Query: 31 LFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + V+ ++ Q+ V + +
Sbjct: 9 RVLEWYQLHGRKTLPWQQEKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVVALADA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ ++ +G Y ++ N+ + + + P++ + + LPGIGR A +LS
Sbjct: 69 PVDEVLHHWTGLGYYA-RARNLHKAAQQIRDHHHGLFPESFDEVMALPGIGRSTAGAVLS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLH 201
++ G P +D ++ R+ R PG +VE L R+ P + ++
Sbjct: 128 LSLGQPHAILDGNVKRVLTRWLALPGWPGQKQVENELWEIAIRLTPKLGVAQYNQAMMDI 187
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
G +C KP C C + C+
Sbjct: 188 GATICTRSKPACDRCPVRGDCQ 209
>gi|296104623|ref|YP_003614769.1| adenine DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059082|gb|ADF63820.1| adenine DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 352
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + K P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVATRHNGKFPETFDEVADLPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L I P K + ++ G VC KP+C+ C ++N
Sbjct: 149 RCYAVDGWPGKKEVEKRLWEISEAVTPAKGVERFNQAMMDLGAMVCTRSKPKCELCPLNN 208
Query: 221 LCKRI 225
LC
Sbjct: 209 LCVAY 213
>gi|238787380|ref|ZP_04631179.1| A/G-specific adenine glycosylase [Yersinia frederiksenii ATCC
33641]
gi|238724642|gb|EEQ16283.1| A/G-specific adenine glycosylase [Yersinia frederiksenii ATCC
33641]
Length = 352
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 82/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V + +
Sbjct: 3 QAQQFAHQVLEWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMQHFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 63 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDEILALPGIGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS++ G +D ++ R+ R G K + Q I P K
Sbjct: 122 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKDVEGRLWQISEDITPAKGVGQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 182 NQAMMDLGAIVCTRSKPKCELCPLNLGCLAY 212
>gi|325270335|ref|ZP_08136940.1| A/G-specific adenine glycosylase [Prevotella multiformis DSM 16608]
gi|324987279|gb|EGC19257.1| A/G-specific adenine glycosylase [Prevotella multiformis DSM 16608]
Length = 335
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ + + + A E
Sbjct: 7 LLQWFKENGRPLPWRQTDDAYAIWLSEVILQQTRIAQGTAYWERFMAQWPSVDDLAAATE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ P+T + L L G+G A I S A
Sbjct: 67 DEVLKAWQGLGYYSRARNLHAAARQVVGKGGF---PRTFKELKTLKGVGDYTAAAIASFA 123
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG P VD +++R+ +R + + + + +IP + + ++ G
Sbjct: 124 FGEPVAVVDGNVYRVLSRYFGIDTPIDSTQGKKEFQAMAQSLIPHGEPADYNQAIMDFGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C P+C +C + C ++
Sbjct: 184 IQCTPASPRCAACPLCETCIAFRE 207
>gi|203288173|ref|YP_002223188.1| endonuclease III [Borrelia recurrentis A1]
gi|201085393|gb|ACH94967.1| endonuclease III [Borrelia recurrentis A1]
Length = 205
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 104/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L + N++ L++ V+LSA++TD VNK LF+ + + + ++
Sbjct: 14 RYPYVKPFLTFKNNYELLIMVILSARTTDNMVNKIAPKLFDKYGDFKSLACVDLVDVERL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I +G Y KS+NII+ + +++ FD IP + L LPG+GRK ANVIL + + P I
Sbjct: 74 IYKLGFYSNKSKNIINCARMILENFDGIIPDNIFDLISLPGVGRKTANVILGVVYKKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R G+ KTP K+E L IP QY + HGR VC +R C+
Sbjct: 134 IVDTHFSRVVIRHGITFEKTPLKIELDLRNRIPADKQYRFSMAINRHGRDVCTSRSQNCK 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRL 204
>gi|313672585|ref|YP_004050696.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939341|gb|ADR18533.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 218
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 118/209 (56%), Gaps = 7/209 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGE-------LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+++++F L ++ + L N F ++++ L+S ++ D KA++ LF
Sbjct: 4 DIDKLFLLLESEYKRFETPSVTKIANLIKSNPFAVLISTLISLRTKDEVTLKASERLFSR 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
AD P ML + +++ I G YRKKS I+ +S L+ + ++P +L+ L ++ G+
Sbjct: 64 ADNPFDMLKLSTDEVERLIYPAGFYRKKSLLILDISKYLVENYQGRVPNSLDELLKIKGV 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK AN++L FG+P + VDTH+ RI NR+GL K P++ E L +P K+ +
Sbjct: 124 GRKTANLVLVEGFGVPAVCVDTHVHRIMNRMGLVNTKNPDETEMVLRDKLPVKYWIKWNE 183
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+LV +G+ VCK P C +C +S+ C +I
Sbjct: 184 YLVAYGQNVCKPISPLCSTCKLSDFCAKI 212
>gi|114769697|ref|ZP_01447307.1| Putative mutY, A/G-specific adenine glycosylase [alpha
proteobacterium HTCC2255]
gi|114549402|gb|EAU52284.1| Putative mutY, A/G-specific adenine glycosylase [alpha
proteobacterium HTCC2255]
Length = 345
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 9/208 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV-----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
E+ + + + P L N + + ++ ++ Q+T V + +
Sbjct: 4 EILSWYDANAREMPWRIPPLNSKMGTIPNPYYIWMSEVMLQQTTVAAVKEYFVKFITLWP 63
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T M ++ + +G Y ++ N++ + ++ +++ K P + L LPGIG
Sbjct: 64 TVDDMANAKDEDVMGAWAGLGYYA-RARNLLKCARVVKDQYGGKFPCNEKDLLSLPGIGP 122
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQYNAH 195
A I+S+AF I +D +I R+ +RI P + L + P +
Sbjct: 123 YTAAAIMSIAFNKKAIVLDGNIERVMSRIYAVQEPLPASKKDLWLLASDLTPENRCGDYA 182
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ G +C R P+C C + C+
Sbjct: 183 QSVMDLGATICTPRNPKCSICPWNYNCE 210
>gi|183602130|ref|ZP_02963498.1| probable A/G-specific adenine glycosylase [Bifidobacterium animalis
subsp. lactis HN019]
gi|183218623|gb|EDT89266.1| probable A/G-specific adenine glycosylase [Bifidobacterium animalis
subsp. lactis HN019]
Length = 325
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI-------FYLFSLKWPSPKGELYYV----NHFTLIVA 54
KS +P + + E+ + W + +L + + ++V
Sbjct: 9 KSRKRAQATPEQTVG-ERRARELERSARQALRELATWWQTSARDLPWRYGRTTPWGVLVC 67
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + + A + ++ +G R+ + + +
Sbjct: 68 EVMSQQTQMSRVVPYWEAWMSQWPDAASLAAAEKSEVIRAWGRLGYPRRALR-LQECAEV 126
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---AP 171
+ ++D+++P+ + L LP +G A+ +LS A+G +DT+I R +R L +
Sbjct: 127 VARDYDDRLPREYDELMALPSVGDYTASAVLSFAYGERVAVIDTNIRRALSRAFLGVESL 186
Query: 172 GKTPNKVEQS-LLRIIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G + +E++ ++P + + ++ G VC A+ PQC+ C + C+ +K
Sbjct: 187 GGSCTPLERALAWVVLPKAAEQSVLWNQAVMELGALVCTAKAPQCEQCPLQPQCEFVK 244
>gi|46199837|ref|YP_005504.1| A/G-specific adenine DNA glycosylase [Thermus thermophilus HB27]
gi|46197464|gb|AAS81877.1| A/G-specific adenine DNA glycosylase [Thermus thermophilus HB27]
Length = 325
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 76/203 (37%), Gaps = 10/203 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + L + + + ++V+ +L Q+ + E T +
Sbjct: 1 MEAWQKALLAWYRENARPLPWRGEKDPYRVLVSEVLLQQTRVEQAALYYRRFLERFPTLK 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A +++ + G YR+ + P + L +LPG+G A
Sbjct: 61 ALAAASLEEVLRVWQGAGYYRRAEHLHRLARSVEEL------PPSFAELRKLPGLGPYTA 114
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-HQYNAHYWLVL 200
+ S+AFG VD ++ R+ +R+ ++ ++P + L+
Sbjct: 115 AAVASIAFGERVAAVDGNVRRVLSRLFARESPKEKELFALAQGLLPEGVDPGVWNQALME 174
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G VC ++P+C +C + C+
Sbjct: 175 LGATVCLPKRPRCGTCPLGAFCR 197
>gi|317060589|ref|ZP_07925074.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313686265|gb|EFS23100.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 356
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 83/211 (39%), Gaps = 10/211 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I + K +L + + ++ ++ Q+ V E T +
Sbjct: 2 MRNISKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFARFIEELPTIE 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL + +G Y ++ N+ + ++ + ++P + L +L GIG A
Sbjct: 62 ALANCEEEKLMKLWQGLGYYS-RARNLKKAACQIMENYGGELPAEKKELLQLAGIGPYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I S+A+G VD ++ R+ +R+ G K+E+ + +P + + +
Sbjct: 121 GAISSIAYGRKETAVDGNVIRVISRLFAVDGNVLEGKGRQKIEEIAYQELPEERAGDFNQ 180
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
L+ G +C C C + C+ +
Sbjct: 181 ALMDLGATICIPNGAALCHLCPLQLECQAYR 211
>gi|303326262|ref|ZP_07356705.1| A/G-specific adenine glycosylase [Desulfovibrio sp. 3_1_syn3]
gi|302864178|gb|EFL87109.1| A/G-specific adenine glycosylase [Desulfovibrio sp. 3_1_syn3]
Length = 377
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 84/212 (39%), Gaps = 10/212 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ L ++ + + + L + + + ++ ++ Q+
Sbjct: 1 MPPDAHLPQLREALLAWFAAHQRPLPWRINYTPYEVWISEVMLQQTQMERGVSYFTRWMA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A E+++ +G Y ++ ++++ + +++ + P LE + LPG
Sbjct: 61 RFPDVAALAAASEEEVLRLWEGLGYYS-RARHVLAAARLIMEKHKGVFPSGLEDIRALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
+G A + S+AFG VD ++ R+ R+ G + V LR++P
Sbjct: 120 VGPYTAGAVASIAFGEKLPCVDANVERVVARVFDLDGPVKQEPAASAVRAWALRLVPEGR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC +KP+C C ++ C
Sbjct: 180 AREHNQAMMELGALVC-GKKPRCALCPLAAFC 210
>gi|299820551|ref|ZP_07052441.1| A/G-specific adenine glycosylase [Listeria grayi DSM 20601]
gi|299818046|gb|EFI85280.1| A/G-specific adenine glycosylase [Listeria grayi DSM 20601]
Length = 364
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 78/218 (35%), Gaps = 9/218 (4%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ ++ + S K L + + + + V+ ++ Q+ V +
Sbjct: 5 SLDWDQSKINAFQKALVGWYESNKRILPWRENNDPYRIWVSEVMLQQTKVDTVIPYFERF 64
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
T + E + +G Y + N+ ++ + K+P L+ + L
Sbjct: 65 MTTFPTMRDFAEAEEAAILKIWEGLGYYS-RVRNLQKAMQQVLLDHAGKVPSDLQTILSL 123
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLR----IIPP 188
G+G A ILS+A+ +D ++ R+ +R + + ++
Sbjct: 124 KGVGPYTAGAILSIAYEQAEPAIDGNVMRVMSRVFKIDADIMKPATRKLFDSKLRPLLAG 183
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G +C ++P C C ++ C+ +
Sbjct: 184 TKPSSFNQGLMEVGALICTPKQPMCLLCPLNEFCEAHQ 221
>gi|317132409|ref|YP_004091723.1| A/G-specific adenine glycosylase [Ethanoligenens harbinense YUAN-3]
gi|315470388|gb|ADU26992.1| A/G-specific adenine glycosylase [Ethanoligenens harbinense YUAN-3]
Length = 368
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 85/224 (37%), Gaps = 13/224 (5%)
Query: 15 PLGCLYTPKELEEIF---YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNK 68
L+ P++++ + + + L + + + V+ ++ Q+ V
Sbjct: 4 RRKSLFVPEKIDALRPFSAPLLAWYGANARRLPWRVLPTPYRVWVSEIMLQQTRVEAVVP 63
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ + E +L +G Y + N+ + ++ +P + E
Sbjct: 64 YYERFLAALPDLPALARAPEDRLLKLWEGLGYYS-RVRNMQKAAQAVVLAGGTNLPGSYE 122
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLL 183
L LPGIG A + S+AFGIP VD ++ R+ R+ +A + EQ+
Sbjct: 123 ALRALPGIGPYTAGAVASIAFGIPVPAVDGNVLRVLARLLACREDIALPQVKRAFEQAAA 182
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
++ + + + ++ G VC P+C C + C +
Sbjct: 183 ALLLRECPGDFNQAMMELGATVCLPNAAPRCADCPVRAFCAAAR 226
>gi|126665718|ref|ZP_01736699.1| A/G-specific adenine glycosylase [Marinobacter sp. ELB17]
gi|126629652|gb|EBA00269.1| A/G-specific adenine glycosylase [Marinobacter sp. ELB17]
Length = 353
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 7/190 (3%)
Query: 42 ELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
++ + + V+ ++ Q+ V + + + + ++ +G
Sbjct: 22 PWHHNRTAYRVWVSEIMLQQTQVATVIPYYQAFMQRFPDVHSLALAPADDVLSHWSGLGY 81
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
Y ++ N+ + ++ E + + P+ + L L GIGR A IL+ ++ I +D ++
Sbjct: 82 YA-RARNLQKAAQAVVQEHNGEFPRDQQQLEALSGIGRSTAAAILAQSYDIKAAILDGNV 140
Query: 161 FRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
R+ R G K+ Q + P + ++ G VC +P C+
Sbjct: 141 KRVLARYHAVTGWPGQTAVLQKLWQFAEQHTPNDRIRDYTQAIMDLGALVCTRSRPGCER 200
Query: 216 CIISNLCKRI 225
C + C
Sbjct: 201 CPVQQNCLAY 210
>gi|307704961|ref|ZP_07641849.1| A/G-specific adenine glycosylase [Streptococcus mitis SK597]
gi|307621471|gb|EFO00520.1| A/G-specific adenine glycosylase [Streptococcus mitis SK597]
Length = 391
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPERKIVSFRKKLLTWYDENKRDLPWRRSRNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + ++ +F + P T +G++ L
Sbjct: 70 DWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYKGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 225
>gi|290968764|ref|ZP_06560301.1| A/G-specific adenine glycosylase [Megasphaera genomosp. type_1 str.
28L]
gi|290781060|gb|EFD93651.1| A/G-specific adenine glycosylase [Megasphaera genomosp. type_1 str.
28L]
Length = 355
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 31 LFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + + VA ++ Q+ V ++ + T + + A
Sbjct: 14 RLLAWFAQHRRDLPWRTEPRDPYHVWVAEIMLQQTKVEAVRPYYENWLHVFPTMEALAAA 73
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ + +G Y ++ N+ + ++ ++ +PQT + + L GIG A ILS
Sbjct: 74 EPDEVLRQWQGLGYYS-RARNLHAAVREVMTKYGGTVPQTAKEIRTLKGIGEYTAGAILS 132
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+A+G VD ++ RI R+ + + ++ Q + +P + L+
Sbjct: 133 IAYGQDETAVDGNVLRIFARVYGIARNILSSRVKKEITQLVAAQLPTGKAGMFNEALMDF 192
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G VC + P C+ C + +C+
Sbjct: 193 GAMVCIPKTPHCEVCPLMTMCRAY 216
>gi|212704657|ref|ZP_03312785.1| hypothetical protein DESPIG_02720 [Desulfovibrio piger ATCC 29098]
gi|212671891|gb|EEB32374.1| hypothetical protein DESPIG_02720 [Desulfovibrio piger ATCC 29098]
Length = 399
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 10/216 (4%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
P G K L E+ + + L + + + ++ ++ Q+
Sbjct: 24 PPGHRPPEKHLPELQQALLAWFDANARPLPWRRHYTPYEVWISEIMLQQTQMERGVSYFL 83
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + A E+++ + +G Y ++ N+++ + +++ E P E +
Sbjct: 84 RWMERFPDLHALAAASEEEVLHAWEGLGYYS-RARNLLAAARLVMREHGGIFPSDPEAIR 142
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRII 186
LPGIG I S+AF +P +D ++ R+ R+ G ++ + RI+
Sbjct: 143 ALPGIGPYTTAAIASIAFNLPVACIDANVERVIARVFDVDSPVKSGPAAARIAELARRIL 202
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P + ++ G VC +KP+C C ++ C
Sbjct: 203 PEGEARRHNQAMMELGALVC-GKKPRCGQCPLARFC 237
>gi|326429808|gb|EGD75378.1| A/G-specific adenine glycosylase [Salpingoeca sp. ATCC 50818]
Length = 400
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 5/184 (2%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V T + + +Q +G Y +
Sbjct: 22 AYAVWVSEIMLQQTQVKTVIDYYTRWMAKWPTLKDLAQATPDDVQQMWAGLGYYSRGRRL 81
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR- 166
+ H+ L+ LPG+G A I S+AFG VD ++ R+ R
Sbjct: 82 LQGAKHVEEKLNGRIPETYKGLLSELPGVGPYTAAAIASIAFGCVKGVVDGNVLRVLARL 141
Query: 167 ----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ ++ P + + ++ G C + P C +C +++LC
Sbjct: 142 RRITQPIDTTPVQKAMQALSDALVDPSRPGDFNQAVMELGATTCTPKAPNCTACPLASLC 201
Query: 223 KRIK 226
+ +
Sbjct: 202 QSHR 205
>gi|325858525|ref|ZP_08172629.1| A/G-specific adenine glycosylase [Prevotella denticola CRIS 18C-A]
gi|325483022|gb|EGC86011.1| A/G-specific adenine glycosylase [Prevotella denticola CRIS 18C-A]
Length = 335
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ + + + A E
Sbjct: 7 LLQWFKENGRPLPWRQTDDAYAIWLSEVILQQTRIAQGTAYWERFMAQWPSVDDLAAATE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ P+T + L L G+G A I S A
Sbjct: 67 DEVLKAWQGLGYYSRARNLHAAARQVVG---MGGFPRTFKELKTLKGVGDYTAAAIASFA 123
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG P VD +++R+ +R + + + + +IP + + ++ G
Sbjct: 124 FGEPVAVVDGNVYRVLSRYFGIDTPIDSTQGKKEFQAMAQSLIPHGEPADYNQAIMDFGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C P+C +C + C ++
Sbjct: 184 IQCTPASPRCAACPLCETCIAFRE 207
>gi|203284640|ref|YP_002222380.1| endonuclease III [Borrelia duttonii Ly]
gi|201084083|gb|ACH93674.1| endonuclease III [Borrelia duttonii Ly]
Length = 205
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 103/191 (53%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L + N++ L++ V+LSA++TD VNK LF+ + + ++
Sbjct: 14 RYPYVKPFLTFKNNYELLIMVILSARTTDNMVNKIAPKLFDKYGDFKSLACADLVDVERL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I +G Y KS+NII+ + +++ FD IP + L LPG+GRK ANVIL + + P I
Sbjct: 74 IYKLGFYSNKSKNIINCARMILENFDGIIPDNIFDLISLPGVGRKTANVILGVVYKKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R G+ KTP K+E L IP QY + HGR VC +R C+
Sbjct: 134 IVDTHFSRVVIRHGITFEKTPLKIELDLRNRIPADKQYRFSMAINRHGRDVCTSRSQNCK 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRL 204
>gi|294675783|ref|YP_003576398.1| A/G-specific adenine glycosylase [Rhodobacter capsulatus SB 1003]
gi|294474603|gb|ADE83991.1| A/G-specific adenine glycosylase [Rhodobacter capsulatus SB 1003]
Length = 359
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 5/179 (2%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+T V + + A + + +G Y +
Sbjct: 40 DPYHVWLSEVMLQQTTVAAVRDYFRRFTARWPGVADLAAAEDGAVMAEWAGLGYYARARN 99
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + P+T EGL LPGIG A + ++AF P + VD ++ R+ R
Sbjct: 100 LLK--CARAVAAAGGRFPETAEGLRALPGIGPYTAAAVAAIAFDEPAVVVDGNVERVVAR 157
Query: 167 IGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P + R+ P + + ++ G +C R P C C +S+ C
Sbjct: 158 LWAVETPMPAAKPALIDRAGRLTPRRRPGDHAQAMMDLGATICTPRNPACALCPVSDFC 216
>gi|238794734|ref|ZP_04638338.1| Endonuclease III [Yersinia intermedia ATCC 29909]
gi|238725965|gb|EEQ17515.1| Endonuclease III [Yersinia intermedia ATCC 29909]
Length = 178
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 128/173 (73%)
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
+LLSAQ+TDV+VNKAT L+ +A+TPQ +L +G L++YI+TIG++ K+EN+I I
Sbjct: 1 MLLSAQATDVSVNKATAKLYPVANTPQALLDLGVDGLKSYIKTIGLFNTKAENVIKTCRI 60
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
L+ + + ++P+ L LPG+GRK ANV+L+ AFG PTI VDTHIFR+ NR G APG
Sbjct: 61 LLEKHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSN 120
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++VE LL+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 121 VDQVEAKLLKVVPAEFKLDCHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEK 173
>gi|319427166|gb|ADV55240.1| A/G-specific adenine glycosylase [Shewanella putrefaciens 200]
Length = 362
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + +++ V+ ++ Q+ V +
Sbjct: 10 RIVSWYDNHGRKTLPWQQDKTPYSVWVSEIMLQQTQVATVIPYYLKFMARFPDVLALANA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ ++ +G Y ++ N+ + ++ +++ P E + LPGIGR A +LS
Sbjct: 70 PDDEVLHHWTGLGYYA-RARNLHKAAKMIRDDYQGLFPTDFEQVLALPGIGRSTAGAVLS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
++ G +D ++ R+ R G G K Q + P + + ++
Sbjct: 129 LSLGQHHPILDGNVKRVLARHGAIAGWPGQKTVEEQLWQLTDTLTPQQDIQKYNQAMMDI 188
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C KP C C ++ CK
Sbjct: 189 GASICTRSKPNCAVCPVAIDCKA 211
>gi|307253413|ref|ZP_07535284.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859092|gb|EFM91134.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 381
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 86/208 (41%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+++ P + + L G+GR A
Sbjct: 78 ADAHIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNDEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE +L ++ P + + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENTLWQLTASVTPNRQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C + +LC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLVDLCEANR 224
>gi|225548060|ref|ZP_03769345.1| hypothetical protein RUMHYD_00039 [Blautia hydrogenotrophica DSM
10507]
gi|225040736|gb|EEG50982.1| hypothetical protein RUMHYD_00039 [Blautia hydrogenotrophica DSM
10507]
Length = 354
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 10/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L +I + K L + N + V+ ++ Q+ V + E +
Sbjct: 4 LRQIGEPLMKWYQENKRVLPWRDQNNAYYTWVSEIMLQQTRVEAVKPYFQRFMEELPDIE 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL +G Y + N+ + ++ ++ ++P+ E L L GIG A
Sbjct: 64 ALARCPEEKLLKLWEGLGYYN-RVRNMQKAAQEVMEKYGGQLPRNYELLRELKGIGNYTA 122
Query: 142 NVILSMAFGIPTIGVDTHI-----FRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+ I VD ++ N + ++E+ L +IP + + +
Sbjct: 123 GAIASIAYEIAVPAVDGNVLRVISRVTENGGDIRKQSVKRQIEEELREVIPREKPGDFNQ 182
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
L+ G +C + +CQ C I C+
Sbjct: 183 ALMELGAVICVPNGQAKCQLCPIREFCQA 211
>gi|158521530|ref|YP_001529400.1| A/G-specific adenine glycosylase [Desulfococcus oleovorans Hxd3]
gi|158510356|gb|ABW67323.1| A/G-specific adenine glycosylase [Desulfococcus oleovorans Hxd3]
Length = 360
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 82/204 (40%), Gaps = 11/204 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + +L + N + + V+ ++ Q+ V + + +
Sbjct: 9 FQRRLLRWYTAHQRDLPWRRSKNPYHIWVSEVMLQQTQVATVVDYYRRFLQAFPDIGTLA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + +G Y ++ N+ + ++ ++P+T E RLPG+G +
Sbjct: 69 VAELQDVLKLWEGLGYYA-RAANLHKAARQIVAGGKKRVPRTPETFGRLPGVGDYINAAV 127
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPG------KTPNKVEQSLLRIIPPKHQYNAHYWL 198
S+AFG P VD ++ R+ R+ L +E++ L ++ K + +
Sbjct: 128 SSIAFGHPLPVVDGNVKRVLARLFLLDEPVNRPSNHRVFLEKARL-LLAFKDPGTFNQAM 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ G VCK +P C C +++ C
Sbjct: 187 MELGALVCKPGRPLCDQCPVASFC 210
>gi|319952648|ref|YP_004163915.1| a/g-specific DNA-adenine glycosylase [Cellulophaga algicola DSM
14237]
gi|319421308|gb|ADV48417.1| A/G-specific DNA-adenine glycosylase [Cellulophaga algicola DSM
14237]
Length = 345
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 35 KWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ K +L + N + + ++ ++ Q+ E T + + A E+++
Sbjct: 10 WYDVNKRDLPWRNTVNPYNIWLSEIMLQQTRVAQGTPYYLKFIENFPTIKDLAAAKEEEI 69
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y ++ N+ + + + NE+ + P T + L +L G+G A+ I S++F +
Sbjct: 70 LKLWQGLGYYS-RARNLHATAKTVTNEYKGEFPNTYKELLQLKGVGDYTASAIASISFNL 128
Query: 152 PTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
P VD +++R+ R + + ++ ++ K+ + + ++ G C
Sbjct: 129 PEPVVDGNVYRVLARYYGIAMPINSTEGIKYFKKIAREVMNVKNIRDYNQGIMEFGAIQC 188
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
R P C C +++ C +K+
Sbjct: 189 TPRNPNCADCPLNDSCVALKE 209
>gi|228476328|ref|ZP_04061029.1| A/G-specific adenine glycosylase [Staphylococcus hominis SK119]
gi|228269611|gb|EEK11117.1| A/G-specific adenine glycosylase [Staphylococcus hominis SK119]
Length = 348
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 78/200 (39%), Gaps = 8/200 (4%)
Query: 35 KWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ + E+ + N + + ++ ++ Q+ V T + + E ++
Sbjct: 14 WFEKNQREMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYNKFIHRFPTIEALSEAKEDEV 73
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Y +G Y ++ N + + + ++ ++P + + L G+G ++S+AF
Sbjct: 74 LKYWEGLGYYS-RARNFHTAIKEVHHNYNAEVPSSPKVFGELKGVGPYTQAAVMSIAFNR 132
Query: 152 PTIGVDTHIFRIS----NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
P VD ++FR+ N ++ K + L + + ++ G +C
Sbjct: 133 PLATVDGNVFRVWTRLNNDHRDIKLQSTRKSFEKELEPFVQEEAGTFNQSMMELGATICT 192
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
+ P C C + C+ ++
Sbjct: 193 PKNPLCLFCPVQENCEAFRK 212
>gi|306829565|ref|ZP_07462755.1| A/G-specific adenine glycosylase [Streptococcus mitis ATCC 6249]
gi|304428651|gb|EFM31741.1| A/G-specific adenine glycosylase [Streptococcus mitis ATCC 6249]
Length = 386
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 85/216 (39%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWPEEKIFSFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + + ++ +F+ K P T EG++ L G
Sbjct: 71 WFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIMTDFEGKFPNTYEGISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + + + +I P+
Sbjct: 130 IGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNYDIGVPSNRKIFQAMMEILIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|223936444|ref|ZP_03628356.1| A/G-specific adenine glycosylase [bacterium Ellin514]
gi|223894962|gb|EEF61411.1| A/G-specific adenine glycosylase [bacterium Ellin514]
Length = 392
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 20/240 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLS 58
VSSK + N ++ + + +L + + + + V+ ++
Sbjct: 13 VSSKSVRRAKPNVEPKPSQKDLKIHALASALLHWFSQSARDLPWRRTRDPYAIWVSEIML 72
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
Q+ V +H + T Q + +++ +G Y + N+ + +++
Sbjct: 73 QQTQVKTVIPYWEHWMQNLPTIQSLAEAAPERIHKLWEGLGYYT-RVRNMQQAAQEIMSR 131
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
D P + + L GIGR A I S+AF P +D ++ R+ R+ +K+
Sbjct: 132 HDGSFPSDFDSILALKGIGRYTAGAIASIAFNQPKPLLDGNVIRVLTRLFGIAENPRDKI 191
Query: 179 EQSLL----------------RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L P + + L+ G +C R+PQC C + C
Sbjct: 192 TNEQLWSLAEALVVSASNSNNNKSHPSACSHLNQSLMELGALICTPRQPQCLICPVRQDC 251
>gi|32470834|ref|NP_863827.1| A/G-specific adenine glycosylase [Rhodopirellula baltica SH 1]
gi|32442979|emb|CAD71500.1| A/G-specific adenine glycosylase [Rhodopirellula baltica SH 1]
Length = 367
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 85/208 (40%), Gaps = 16/208 (7%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + T + +
Sbjct: 3 KRLLSWFSDNARDLPWRRDHSPYRVWISEIMCQQTQVATVLPYFERFLSTYPTIRDLADA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E +L +G YR ++ ++ + + ++ E + + P++ + + LPGIGR A I S
Sbjct: 63 DESQLMRMWEGLGYYR-RARSLHAAAKKMVEEHNGEFPESFDDVLALPGIGRYTAGAIQS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYN-------A 194
++ ++ + R+ +R KV Q+ L +++PP+ +
Sbjct: 122 ISRNKAFPILEGNTQRVFSRWIGLTVPPTEKVAQARLWELSDKMLPPRKADDRSNGPAGF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + G +C R P+C C ++ +C
Sbjct: 182 NQAAMELGALICSPRSPKCDECPVATMC 209
>gi|308449872|ref|XP_003088105.1| hypothetical protein CRE_20654 [Caenorhabditis remanei]
gi|308249549|gb|EFO93501.1| hypothetical protein CRE_20654 [Caenorhabditis remanei]
Length = 491
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + + T + + Y
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDKFIQRFPTVDDLGKASWDDVAPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + PQ+LE L GIGR ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAGVVSQQGHF---PQSLEQWVELSGIGRSTGGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R L+ + Q + P + ++ ++ G +C +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPIHERAMWQLAESLCPTERNHDYTQAIMDLGATICTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + C+ +Q
Sbjct: 196 LCLYCPMQQHCQAHQQ 211
>gi|54293874|ref|YP_126289.1| hypothetical protein lpl0930 [Legionella pneumophila str. Lens]
gi|53753706|emb|CAH15164.1| hypothetical protein lpl0930 [Legionella pneumophila str. Lens]
Length = 355
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + + V+ ++ Q+ V E +
Sbjct: 12 QLLLDWYDLHGRKDLPWQLPRSPYRVWVSEIMLQQTQVQTVIPYFNRFIEHFPDIFLLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ + +G Y ++ N+ + + I+ ++++ P+ L L +LPGIG A IL
Sbjct: 72 AEEDEVLSLWSGLGYYS-RARNLHNTAKIISDQYNGVFPEDLNILVQLPGIGPSTAAAIL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRI----IPPKHQYNAHYWLVL 200
S AF P +D ++ R+ +R L G +V++ L + +P + + ++
Sbjct: 131 SQAFNKPAAILDGNVKRVLSRFFLIEGWSEQAQVKKKLWELASSCMPNERCADYTQAIMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G C + PQC C + N C
Sbjct: 191 LGATCCTNKNPQCLRCPVKNHCLAF 215
>gi|326793902|ref|YP_004311722.1| A/G-specific adenine glycosylase [Marinomonas mediterranea MMB-1]
gi|326544666|gb|ADZ89886.1| A/G-specific adenine glycosylase [Marinomonas mediterranea MMB-1]
Length = 358
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + ++ ++ Q+ V + + + + + +
Sbjct: 23 RKDLPWQKDKTPYRVWISEIMLQQTQVTTVIPYYEKFMSSFPDVYALASAKQDDVLAHWS 82
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +L++EFD + P+T+EG+ LPGIGR A+ ILS++ G+ + +
Sbjct: 83 GLGYYA-RARNMHKAATMLVDEFDGEFPKTVEGVCELPGIGRSTASAILSISRGVQSAIL 141
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R P K E + +P ++ G +C KP
Sbjct: 142 DGNVKRVLARFHAIPNWPGEKKTENRMWGVAESYMPEIRCGEYTQAMMDLGATLCTRSKP 201
Query: 212 QCQSCIISNLC 222
+C C +S C
Sbjct: 202 KCHVCPLSEDC 212
>gi|218282798|ref|ZP_03488962.1| hypothetical protein EUBIFOR_01548 [Eubacterium biforme DSM 3989]
gi|218216346|gb|EEC89884.1| hypothetical protein EUBIFOR_01548 [Eubacterium biforme DSM 3989]
Length = 328
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++E + L + + + + ++ +++ Q+ + K + +
Sbjct: 1 MKEFQKDLIDWYIKNHRPLEFRLKKDPYEIWISEIMAQQTRIEAMLPYFKRWIQQLPDIE 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++KL + +G Y + +NI + + ++ K+P T E L +LPGIG A
Sbjct: 61 SVAKCDDEKLNKLWQGLGYYS-RCKNIKKCAIECVEKYSGKLPCTKEELLKLPGIGPYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIP-PKHQYNAH 195
I S+A G VD ++ R+ +R+ ++E+ + +P + +
Sbjct: 120 GAIASIANGQRVSAVDGNVIRVFSRLYNIFEDVTKTSVKKQIEELVDESLPSKEEISYYN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C + P+C+ C + C
Sbjct: 180 QAIMELGALICIPKNPRCELCPVKKYCDA 208
>gi|153208890|ref|ZP_01947109.1| A/G-specific adenine glycosylase [Coxiella burnetii 'MSU Goat
Q177']
gi|154707598|ref|YP_001424499.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii Dugway
5J108-111]
gi|165923356|ref|ZP_02219693.1| A/G-specific adenine glycosylase [Coxiella burnetii RSA 334]
gi|212218483|ref|YP_002305270.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii CbuK_Q154]
gi|120575611|gb|EAX32235.1| A/G-specific adenine glycosylase [Coxiella burnetii 'MSU Goat
Q177']
gi|154356884|gb|ABS78346.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii Dugway
5J108-111]
gi|165916682|gb|EDR35286.1| A/G-specific adenine glycosylase [Coxiella burnetii RSA 334]
gi|212012745|gb|ACJ20125.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii CbuK_Q154]
Length = 354
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 8/214 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + + F ++ + + V+ ++ Q+ V + +
Sbjct: 1 MDSKQFAQGVLRWF-DRYGRHDLPWQKKLTPYRVWVSEIMLQQTQVSTVIPYFERFIKRF 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + ++ + +G Y ++ N+ + I+ + + P T+E L+ LPGIG
Sbjct: 60 PTVGALALAPLDEILAHWSGLGYYA-RARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIG 118
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQY 192
R A +LS+ + +D ++ R+ R +V + P +
Sbjct: 119 RSTAGAVLSLGMHQYAVILDGNVKRVLARYNALDVPINQQVGINILWNLAEKYTPKNRCW 178
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G +C KP+C C + + CK +
Sbjct: 179 DYNQAMMDIGAMICTRTKPKCSLCPLKSSCKAHR 212
>gi|310766470|gb|ADP11420.1| adenine DNA glycosylase [Erwinia sp. Ejp617]
Length = 358
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPNVSDLAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQTVVEKHGGVFPQTFAEVADLPGVGRSTAGAILSLALGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + ++ G VC KP+C+ C ++
Sbjct: 147 RCYAVAGWPARKEVEKRLWQISEEVTPADGVRQFNQAMMDLGAMVCTRSKPKCEICPLNT 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCIAY 211
>gi|161507619|ref|YP_001577573.1| endonuclease III [Lactobacillus helveticus DPC 4571]
gi|160348608|gb|ABX27282.1| Endonuclease III [Lactobacillus helveticus DPC 4571]
Length = 206
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + E + +P+ KGEL++ N F L+ AV++SAQ+TD VN+ +
Sbjct: 5 LLSDDEARTVLKRILAMYPNAKGELHWDNTFHLLCAVMMSAQTTDKMVNRVMPDFIKKFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG+YR K++++ + + IL+ ++D+KIP+ + L PG+G
Sbjct: 65 TPEVLANASIEEIESTIKTIGLYRSKAKHLKATAKILVEKYDSKIPEDKKTLMTFPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ +G+P I VDTH+ RIS + K P++VEQ L I+P H+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHVSRISKAFHIVNQKAAPHEVEQRLESILPKNEWIKTHHA 184
Query: 198 LVLHGRYVCKAR 209
++L GRY AR
Sbjct: 185 MILFGRYTMPAR 196
>gi|302383803|ref|YP_003819626.1| A/G-specific adenine glycosylase [Brevundimonas subvibrioides ATCC
15264]
gi|302194431|gb|ADL02003.1| A/G-specific adenine glycosylase [Brevundimonas subvibrioides ATCC
15264]
Length = 348
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 82/210 (39%), Gaps = 13/210 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
E+ + S L + + + + ++ ++ Q+T + +
Sbjct: 8 APELRTALLDWYDSHARSLPWRAPPGSTARTDPYRVWLSEVMLQQTTVPHATPYFERFTA 67
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + A+ + L +G Y ++ N+++ + + N+ P T L LPG
Sbjct: 68 RWPTVVNLAAVEDSDLMAAWAGLGYYA-RARNLLACARAVANDHGGVFPDTEAALLALPG 126
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQY 192
+G A + ++AF P VD ++ R+ +R+ P ++++ ++
Sbjct: 127 VGAYTAAAVAAIAFDRPANVVDGNVERVVSRLFAVQTPLPAARPELKRLAATLVADDRPG 186
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G VC+ + P C C IS C
Sbjct: 187 DWAQALMDLGSTVCRPKSPLCLMCPISGFC 216
>gi|294791454|ref|ZP_06756611.1| putative A/G-specific adenine glycosylase [Scardovia inopinata
F0304]
gi|294457925|gb|EFG26279.1| putative A/G-specific adenine glycosylase [Scardovia inopinata
F0304]
Length = 339
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 29 FYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ S W +L + + + ++V+ ++S Q+ V + TP+ +
Sbjct: 22 YDRLSSWWQDNARDLPWRFGRTSPWGVLVSEVMSQQTPMSRVRPYWLEWMRLWPTPRALS 81
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +G R+ + + +L++ + ++P + L LPG+G A+ +
Sbjct: 82 RAAAADIIAAWGRLGYPRRALR-LQECARVLVSSYGGQVPSVYDQLIALPGVGDYTASAV 140
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP--PKHQYNAHYWL 198
LS AFG +DT+I R+ +R G Q + ++P + + L
Sbjct: 141 LSFAFGTRVPVIDTNIRRVLSRSFEGKESTGGSAKASDRQLAVDLLPRKKEESVIWNQAL 200
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C A KP C C + +LC
Sbjct: 201 MEVGAVICTAHKPLCTQCPLKDLCDFY 227
>gi|116619437|ref|YP_821593.1| A/G-specific DNA-adenine glycosylase [Candidatus Solibacter
usitatus Ellin6076]
gi|116222599|gb|ABJ81308.1| A/G-specific DNA-adenine glycosylase [Candidatus Solibacter
usitatus Ellin6076]
Length = 337
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 15/206 (7%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + + + ++ ++ Q+ V + + + + A E++
Sbjct: 12 AWYRAAHRDLPWRSSRDPYRVWISEIMLQQTRAQAVIPYYEKFLARFPSVESLAAAPEEE 71
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G Y + + I P+ + + LPGIG A I S+AFG
Sbjct: 72 VLALWSGLGYYSRARNLRNAARQITAAAG---FPREYDAIRALPGIGDYTAAAIASIAFG 128
Query: 151 IPTIGVDTHIFRISNRIGL---------APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+P +D ++ R+ R+ + +Q L + + L+
Sbjct: 129 LPHAVLDGNVLRVVARVENDAADIGSSRTRERFRAIAQQWLEAKEVKHDPGHFNQALMEL 188
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC R+P C C IS C+ ++
Sbjct: 189 GATVCVPRRPLCLVCPISACCRARQE 214
>gi|327314314|ref|YP_004329751.1| A/G-specific adenine glycosylase [Prevotella denticola F0289]
gi|326945178|gb|AEA21063.1| A/G-specific adenine glycosylase [Prevotella denticola F0289]
Length = 335
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ + + + A E
Sbjct: 7 LLQWFKENGRPLPWRQTDDAYAIWLSEVILQQTRIAQGTAYWERFMAQWPSVDDLAAATE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ P+T + L L G+G A I S A
Sbjct: 67 DEVLKAWQGLGYYSRARNLHAAARQVVG---MGGFPRTFKELKTLKGVGDYTAAAIASFA 123
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG P VD +++R+ +R + + + + +IP + + ++ G
Sbjct: 124 FGEPVAVVDGNVYRVLSRYFGIDTPIDSTQGKKEFQAMAQSLIPHGEPADYNQAIMDFGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C P+C +C + C ++
Sbjct: 184 IQCTPASPRCATCPLCETCIAFRE 207
>gi|91776875|ref|YP_546631.1| A/G-specific DNA-adenine glycosylase [Methylobacillus flagellatus
KT]
gi|91710862|gb|ABE50790.1| A/G-specific DNA-adenine glycosylase [Methylobacillus flagellatus
KT]
Length = 368
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 28 IFYLFSLKWPSP-KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I + +L + N + + V+ ++ Q+ V + T +
Sbjct: 14 IADRLITWQKQHGRHDLPWQNTHDPYAIWVSEIMLQQTQVAAVIGYYHKFMQRFPTIASL 73
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A+ + ++ Y +G Y ++ N+ + +++ + P+ + + LPGIGR A
Sbjct: 74 AAVSQDEVMQYWSGLGYYS-RARNLHKAAQQVMSLHAGEFPRDFDAIQALPGIGRSTAAA 132
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWL 198
I S AFG+P +D ++ R+ R L G KVE+ L +I P L
Sbjct: 133 ISSFAFGLPQPILDGNVKRVFARYFLIEGWPGLPKVEKQLWQIAEAMQPQTEMGTYAQAL 192
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ G VC R+P+C +C + C
Sbjct: 193 MDLGATVCV-RRPRCANCPLQEDC 215
>gi|306825160|ref|ZP_07458502.1| A/G-specific adenine glycosylase [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432596|gb|EFM35570.1| A/G-specific adenine glycosylase [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 388
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKIISFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E++L +G Y + N+ + + +I++F + P T EG++ L
Sbjct: 70 DWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQAAAQQIISDFGGQFPNTHEGISGLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ + + + +I PK
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNYDIGVPSNRKIFQAIMEILIDPK 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|184201559|ref|YP_001855766.1| putative adenine glycosylase [Kocuria rhizophila DC2201]
gi|183581789|dbj|BAG30260.1| putative adenine glycosylase [Kocuria rhizophila DC2201]
Length = 336
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 16/221 (7%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVN 67
SP G +E++ + +L + + ++V+ ++ Q+ V V
Sbjct: 14 AESPAGAP-----VEDVRRAVVEWYRGSARDLPWRAPQRTPWGVLVSEIMLQQTPVVRVL 68
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ + TP + A + +G R+ + + + + +E ++P+
Sbjct: 69 PVWQRWLQRWPTPSDLAAASPADVVREWGRLGYPRRALR-LHAAAQCIRDEHGGRVPRDH 127
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG---LAPGKTPNKVE-QSLL 183
L LPGIG A + AFG VDT+I R+ R+ P ++ E
Sbjct: 128 AELLALPGIGAYTAAAVAVFAFGQRHTVVDTNIRRVEARLFSGRALPARSLTAAETALAD 187
Query: 184 RIIPPKHQY--NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++P + ++ G VC AR P+C C + + C
Sbjct: 188 SLLPEDVAGSVAWNQAVMELGALVCMARSPRCGECPVRDSC 228
>gi|114564037|ref|YP_751551.1| A/G-specific adenine glycosylase [Shewanella frigidimarina NCIMB
400]
gi|114335330|gb|ABI72712.1| A/G-specific DNA-adenine glycosylase [Shewanella frigidimarina
NCIMB 400]
Length = 357
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 78/202 (38%), Gaps = 10/202 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + V+ ++ Q+ V + + +
Sbjct: 9 ERIIAWYDLHGRKSLPWQINKTPYRVWVSEIMLQQTQVATVIPYYEKFMARFPSVIDLAN 68
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +G Y ++ N+ + + + + + P + + L GIG+ A +L
Sbjct: 69 AHQDEVLHLWTGLGYYA-RARNLHKAAQHIRDALNGQFPTQFDDVVALSGIGKSTAGAVL 127
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVL 200
S++ G +D ++ R+ R G G VEQ L + P K+ + ++
Sbjct: 128 SLSLGQHHSILDGNVKRVLARHGAIEGWPGQKHVEQQLWQLTDALTPAKNVEKFNQAMMD 187
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G VC KP C +C ++ C
Sbjct: 188 IGSSVCTRSKPNCAACPVAIDC 209
>gi|329954390|ref|ZP_08295482.1| A/G-specific adenine glycosylase [Bacteroides clarus YIT 12056]
gi|328527658|gb|EGF54651.1| A/G-specific adenine glycosylase [Bacteroides clarus YIT 12056]
Length = 350
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + + K +L + + + + ++ ++ Q+ + +
Sbjct: 5 MNRLTEILLDWYADNKRDLPWRDTADPYRIWISEIILQQTRVAQGYEYFLRFIRRFPDVE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + E ++ Y + +G Y + + + K P++ + + L G+G A
Sbjct: 65 TLASASEDEVLKYWQGLGYYSRARNLHAAAKS-----MNGKFPESYQEVRALKGVGDYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+ +P VD +++R+ +R + + ++ +
Sbjct: 120 AAICSIAYNMPYAVVDGNVYRVLSRYWGIDTPIDSTEGKKLFAALADEMLDKSRPAAYNQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 180 AIMDFGAIQCTPQSPNCMFCPLADSCTALSK 210
>gi|296109836|ref|YP_003616785.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
infernus ME]
gi|295434650|gb|ADG13821.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
infernus ME]
Length = 343
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 111/206 (53%), Gaps = 7/206 (3%)
Query: 27 EIFYLFSLKWP--SPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI + + E+ + F ++V+ ++SA++ D + +K LFE +
Sbjct: 2 EIIERLKERIKGDAVVTEIAKERDPFKVLVSTIISARTKDEVTEEVSKKLFEKVKDVDDL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L I EK+L++ + G Y+ K+ + L+ +L +++ ++P ++ L LPG+G K A++
Sbjct: 62 LKIDEKELESLLYPAGFYKNKARTLKKLAKVLKEKYNGEVPSNMDELLSLPGVGVKTASL 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+LS+AF I VDTH+ RISNR +TP + + L +++P K+ + + LVL GR
Sbjct: 122 VLSLAFNKDEICVDTHVHRISNRW-FIDTETPEESREELKKVLPKKYWKSINNLLVLFGR 180
Query: 204 YVCKARKPQCQSC--IISNLCKRIKQ 227
+C KP+C C I LC K+
Sbjct: 181 SICGP-KPKCDKCYEEIKELCPYYKK 205
>gi|288932565|ref|YP_003436625.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
gi|288894813|gb|ADC66350.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
Length = 213
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 115/181 (63%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++V+ +LS ++ D +A++ LF + TP+ + + ++++ IR +G YR+K+
Sbjct: 27 RDPFKILVSAILSTRTRDEATIEASERLFRVVKTPEDLARMKVEEIEKLIRGVGFYREKA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + L IL+ EF++++P LE L +LPG+GRK ANV+L+ AFG I VDTH+ RISN
Sbjct: 87 KKLKKLGEILVKEFNSRVPDKLEDLLKLPGVGRKVANVVLAEAFGKEAIAVDTHVHRISN 146
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R+GL KTP + E+ L +I+P K+ + +V G+ +CK KP+C C + +CK
Sbjct: 147 RLGLVETKTPEETEEELKKIVPKKYWRRVNKAMVGFGQTICKPIKPKCNECKLVEICKYG 206
Query: 226 K 226
K
Sbjct: 207 K 207
>gi|227505960|ref|ZP_03936009.1| A/G-specific DNA glycosylase [Corynebacterium striatum ATCC 6940]
gi|227197482|gb|EEI77530.1| A/G-specific DNA glycosylase [Corynebacterium striatum ATCC 6940]
Length = 287
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 11/200 (5%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ S + L + + ++++ ++S Q+ V + E TP A
Sbjct: 5 AALLTWFDSAERPLPWRRPGTSAWGVLLSEVMSQQTPVARVAPVWEEWMERWPTPADFAA 64
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + +P + L LPGIG A +
Sbjct: 65 ASRAEVLRAWGKLGYPRRALRLWE----CAQEIGEEPVPSDVAKLLALPGIGEYTARAVA 120
Query: 146 SMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+G VDT++ R+ R + K + ++P + L+ G
Sbjct: 121 CFHYGRNVPVVDTNVRRVYARAVDGQFLQPQPSKKELAQVEALLPAVNGPRFSAALMELG 180
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC A+ P+C+ C + C
Sbjct: 181 ALVCTAKSPKCEECPLRTGC 200
>gi|160941162|ref|ZP_02088499.1| hypothetical protein CLOBOL_06055 [Clostridium bolteae ATCC
BAA-613]
gi|158435723|gb|EDP13490.1| hypothetical protein CLOBOL_06055 [Clostridium bolteae ATCC
BAA-613]
Length = 372
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVN 67
+ PLG + L + + S L + + + + ++ ++ Q+ V
Sbjct: 18 REEMPLG---RRERLSAVERPLLAWYSSRARSLPWRDDPKPYRVWISEIMLQQTRVEAVK 74
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ E T + + L +G Y ++ N+ + + ++++E+ +P +
Sbjct: 75 PYFERFMEAFPTVSHLAQAEDDHLMKMWEGLGYYN-RARNLKAAAQMIMSEYGGCLPASF 133
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSL 182
+ L RLPGIG A I S+A+GIP VD ++ R+ +R+ +E L
Sbjct: 134 DELIRLPGIGSYTAGAIASIAYGIPLPAVDGNVLRVISRLLGDREDIKKASVKTGIEAEL 193
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLC 222
++P + + L+ G VC P+C C ++++C
Sbjct: 194 KAVMPQDEASHYNQGLIEIGALVCIPGGEPRCSQCPLASIC 234
>gi|168486550|ref|ZP_02711058.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC1087-00]
gi|183570444|gb|EDT90972.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae
CDC1087-00]
Length = 391
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 87/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATAPEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPNTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + + G + P+ + + + +
Sbjct: 189 RPGDFNQAFMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|91217979|ref|ZP_01254931.1| putative A/G-specific adenine glycosylase [Psychroflexus torquis
ATCC 700755]
gi|91183837|gb|EAS70228.1| putative A/G-specific adenine glycosylase [Psychroflexus torquis
ATCC 700755]
Length = 356
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 73/205 (35%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K +L + + + + ++ ++ Q+ + E T +
Sbjct: 5 KRLLDWYETEKRDLPWRHTKDPYVIWLSEIILQQTQVKQGLPYFEKFIERFPTVHNLAKA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y ++ N+ + + K P + L L G+G A I S
Sbjct: 65 KEDEVMKLWQGLGYYS-RARNLHFTAKYVSETLKGKFPDNFKDLKTLKGVGDYTAAAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLH 201
AF VD ++ R+ +R + + +++ + + ++
Sbjct: 124 FAFDESVAVVDGNVQRVVSRFLGIHTPINSSEGIKEFKTKAQQLMDTSNPATYNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G C+ + P+C C+ C +
Sbjct: 184 GALHCRPKSPKCMFCVFQQDCAAYQ 208
>gi|304383448|ref|ZP_07365911.1| A/G-specific adenine glycosylase [Prevotella marshii DSM 16973]
gi|304335412|gb|EFM01679.1| A/G-specific adenine glycosylase [Prevotella marshii DSM 16973]
Length = 350
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 79/214 (36%), Gaps = 11/214 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P +++ + + EL + + + + ++ ++ Q+ +
Sbjct: 6 PTDVKRFTSALLDWFTHNRRELPWRETTDPYAVWLSEVILQQTRIAQGRDYWERFMRRFP 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A E ++ + +G Y + + I P T E L +L G+G
Sbjct: 66 RVEDLAAATEDEVLRLWQGLGYYSRARNLHTAARQIAARGNF---PDTYEELKKLKGVGD 122
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYN 193
A + S+AFG P VD +++R+ +R + + ++PP
Sbjct: 123 YTAAAVASIAFGHPVAVVDGNVYRVLSRYFGIETPINSTQGKKTFAALAQELLPPDAPSA 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C + P+C C +S C + +
Sbjct: 183 FNQAMMDFGAIQCTPQSPRCLLCPLSGSCVALSE 216
>gi|52841134|ref|YP_094933.1| A/G specific adenine glycosylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296919|ref|YP_123288.1| hypothetical protein lpp0960 [Legionella pneumophila str. Paris]
gi|52628245|gb|AAU26986.1| A/G specific adenine glycosylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750704|emb|CAH12111.1| hypothetical protein lpp0960 [Legionella pneumophila str. Paris]
Length = 355
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + + V+ ++ Q+ V E +
Sbjct: 12 QLLLDWYDLHGRKDLPWQLPRSPYRVWVSEIMLQQTQVQTVIPYFNRFIEHFPDIFLLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ + +G Y ++ N+ + + I+ ++++ P+ L L +LPGIG A IL
Sbjct: 72 ADEDEVLSLWSGLGYYS-RARNLHNTAKIISDQYNGVFPEDLNILVQLPGIGPSTAAAIL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVL 200
S AF P +D ++ R+ +R L G +V++ L + +P + + ++
Sbjct: 131 SQAFNKPAAILDGNVKRVLSRFFLIEGWPEQAQVKKKLWGLASSCMPNERCADYTQAIMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G C + PQC C + N C
Sbjct: 191 LGATCCTNKNPQCLRCPVKNHCLAF 215
>gi|314936077|ref|ZP_07843426.1| A/G-specific adenine glycosylase [Staphylococcus hominis subsp.
hominis C80]
gi|313655894|gb|EFS19637.1| A/G-specific adenine glycosylase [Staphylococcus hominis subsp.
hominis C80]
Length = 348
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 78/200 (39%), Gaps = 8/200 (4%)
Query: 35 KWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ + E+ + N + + ++ ++ Q+ V T + + E ++
Sbjct: 14 WFEKNQREMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYNKFIHRFPTIEALSEAKEAEV 73
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Y +G Y ++ N + + + ++ ++P + + L G+G ++S+AF
Sbjct: 74 LKYWEGLGYYS-RARNFHTAIKEVHHNYNAEVPSSPKVFGELKGVGPYTQAAVMSIAFNR 132
Query: 152 PTIGVDTHIFRIS----NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
P VD ++FR+ N ++ K + L + + ++ G +C
Sbjct: 133 PLATVDGNVFRVWTRLNNDHRDIKLQSTRKSFEKELEPFVQEEAGTFNQSMMELGATICT 192
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
+ P C C + C+ ++
Sbjct: 193 PKNPLCLFCPVQENCEAFRK 212
>gi|209694127|ref|YP_002262055.1| A/G-specific adenine glycosylase [Aliivibrio salmonicida LFI1238]
gi|208008078|emb|CAQ78219.1| A/G-specific adenine glycosylase [Aliivibrio salmonicida LFI1238]
Length = 350
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + + ++ ++ Q+ V + T + +
Sbjct: 10 EWYDNYGRKTLPWQLEKTPYKVWLSEIMLQQTQVTTVIPYFERFMTRFPTVIDLANADQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ +++ + P+T++ + LPGIGR A +LS++
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKTAQIIAEQYNGRFPETIDEVIALPGIGRSTAGAVLSLSL 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQY----NAHYWLVLHGRY 204
+D ++ R +R G + K VE ++ I + ++ G
Sbjct: 129 KQRHPILDGNVKRTLSRCFAIEGWSGKKSVENAMWEIAEEHTPELGVERYNQAMMDMGAI 188
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC KP+C+ C +++LC+
Sbjct: 189 VCTRSKPKCEICPVNDLCQA 208
>gi|84502794|ref|ZP_01000907.1| A/G-specific adenine glycosylase [Oceanicola batsensis HTCC2597]
gi|84388777|gb|EAQ01647.1| A/G-specific adenine glycosylase [Oceanicola batsensis HTCC2597]
Length = 357
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 13/205 (6%)
Query: 30 YLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +L + + + + ++ ++ Q+T V + ++ T
Sbjct: 13 DTLLEWYDRHARDLPWRVPPGAARSPDPYRIWLSEVMLQQTTVAAVRAYFERFTQLWPTV 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++ +G Y ++ N++ + ++ E + P E L +LPGIG
Sbjct: 73 ADLAQADDGRVMAEWAGLGYYA-RARNLLKCARVVAAEHQGRFPDRQEDLLKLPGIGPYT 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYW 197
A I ++AF P + +D ++ R+ R+ P +++ + P +
Sbjct: 132 AAAIAAIAFDRPAVVMDGNVERVMARLHDIHTPLPAAKPELKAEAAALTPAARPGDYAQA 191
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 192 VMDLGATICTPRSPACGICPWRAPC 216
>gi|311695906|gb|ADP98779.1| A/G-specific adenine glycosylase-like protein [marine bacterium
HP15]
Length = 355
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 30 YLFSLKW---PSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ ++ N + + V+ ++ Q+ V + + +
Sbjct: 7 NKLLQWYDCHGRHDLPWHHNRNAYRVWVSEIMLQQTQVTTVIPYFEAFMKRFPDVHALAE 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ +G Y ++ N+ + ++ EFD + PQT E L L GIGR A IL
Sbjct: 67 APVDDVLSHWSGLGYYA-RARNLQKAAQTVVREFDGEFPQTQEKLESLTGIGRSTAAAIL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AFGI +D ++ R+ R PG N++ Q P + ++
Sbjct: 126 AQAFGIRAAILDGNVKRVLARYHAIPGWPGQTAVLNQLWQRAEEHTPKQRVRGYTQGIMD 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC +P C+SC + C+ Q
Sbjct: 186 LGAMVCTRSRPACESCPLQEGCRAYAQ 212
>gi|320539444|ref|ZP_08039113.1| adenine DNA glycosylase [Serratia symbiotica str. Tucson]
gi|320030569|gb|EFW12579.1| adenine DNA glycosylase [Serratia symbiotica str. Tucson]
Length = 361
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 77/213 (36%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + ++ + + ++ ++ Q+ V +
Sbjct: 1 MMQAQQFASVVLSWYQRYGRKTLPWQLDKTAYQVWLSEVMLQQTQVATVIPYFQRFMARF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + ++ + +G Y ++ N+ + ++ + + P T + LPGIG
Sbjct: 61 PNVRALAEAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVVQHSGEFPTTYADIAALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQY 192
R A +LS+A G +D ++ R+ R G K + P +
Sbjct: 120 RSTAGAVLSLALGQHYPILDGNVKRVLARCYAVEGWPGTKTVENRLWTISEEVTPAQDVG 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 QFNQAMMDLGAMVCTRTKPKCELCPLNVDCIAY 212
>gi|242241706|ref|ZP_04796151.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
W23144]
gi|242234842|gb|EES37153.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
W23144]
Length = 356
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 17 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 73 SLSEASEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPETFKKLKGVGPYTQ 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 132 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELHPYVLKDAGTFNQA 191
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 192 MMELGALVCTPKSPLCLFCPIQEHCEAF 219
>gi|303253155|ref|ZP_07339304.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248798|ref|ZP_07530811.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307257828|ref|ZP_07539585.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|302647837|gb|EFL78044.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854725|gb|EFM86915.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306863734|gb|EFM95660.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 381
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 8/208 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F+ + + + ++ ++ Q+ V + E T +
Sbjct: 19 AKAVLAWFAQ-YGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIERFPTVTDL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F+ + P + + L G+GR A
Sbjct: 78 ADAYIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFNGEFPTDFDDVLALSGVGRSTAGA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWL 198
ILS P +D ++ R+ +R G + K VE +L ++ P + + + +
Sbjct: 137 ILSSVLNAPHPILDGNVKRVLSRAFAVEGWSGEKSVENTLWQLTASVTPNRQVADFNQAM 196
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC KP+C C + +LC+ +
Sbjct: 197 MDLGAMVCTRSKPKCSLCPLVDLCEANR 224
>gi|270292779|ref|ZP_06198990.1| A/G-specific adenine glycosylase [Streptococcus sp. M143]
gi|270278758|gb|EFA24604.1| A/G-specific adenine glycosylase [Streptococcus sp. M143]
Length = 388
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWPEEKISSFREKLLNWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + ++ +F + P T EG++ L G
Sbjct: 71 WFPTAESLANAPEERLLKAWEGLGYYS-RVRNMQVAAQQIMTDFGGQFPNTCEGISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPKH 190
IG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 130 IGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGVPSNRKIFQAMMEILIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPRPEESPVKEFSAAYQ 225
>gi|157374358|ref|YP_001472958.1| A/G-specific adenine glycosylase [Shewanella sediminis HAW-EB3]
gi|157316732|gb|ABV35830.1| A/G-specific adenine glycosylase [Shewanella sediminis HAW-EB3]
Length = 370
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V E Q + + ++ ++ +G Y ++
Sbjct: 45 KTPYKVWVSEIMLQQTQVSTVIPYYLKFMERFPDIQSLADAPQDEVLHHWTGLGYYA-RA 103
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ +E P E + LPGIGR A +LS++ +D ++ R+
Sbjct: 104 RNLHKSAQMIRDEHAGSFPTHFEQVLALPGIGRSTAGAVLSLSLAQHHPILDGNVKRVLA 163
Query: 166 RIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G G K + ++ P + + ++ G VC KP C C ++
Sbjct: 164 RHGAIEGWPGKKTVENRLWELTDKLTPQQDVQKYNQAMMDIGASVCSRSKPACSECPVAI 223
Query: 221 LCKR 224
C+
Sbjct: 224 DCQA 227
>gi|237715014|ref|ZP_04545495.1| A/G-specific adenine glycosylase [Bacteroides sp. D1]
gi|262409037|ref|ZP_06085582.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_22]
gi|294647094|ref|ZP_06724700.1| A/G-specific adenine glycosylase [Bacteroides ovatus SD CC 2a]
gi|294807154|ref|ZP_06765971.1| A/G-specific adenine glycosylase [Bacteroides xylanisolvens SD CC
1b]
gi|229444847|gb|EEO50638.1| A/G-specific adenine glycosylase [Bacteroides sp. D1]
gi|262353248|gb|EEZ02343.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_22]
gi|292637558|gb|EFF55970.1| A/G-specific adenine glycosylase [Bacteroides ovatus SD CC 2a]
gi|294445654|gb|EFG14304.1| A/G-specific adenine glycosylase [Bacteroides xylanisolvens SD CC
1b]
Length = 346
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + +
Sbjct: 1 MNEFTKTIVEWYKENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVR 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAAEEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPETYPEVLALKGVGEYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSPDCLFCPLAGSCSALSK 206
>gi|81429085|ref|YP_396085.1| putative A/G-specific adenine glycosylase [Lactobacillus sakei
subsp. sakei 23K]
gi|78610727|emb|CAI55778.1| Putative A/G-specific adenine glycosylase [Lactobacillus sakei
subsp. sakei 23K]
Length = 367
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 9/200 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TP E E F + + +L + + + ++ ++ Q+ V +
Sbjct: 1 MTPSEREAFQTAFMAWYDEHRRDLPWRQNQEPYRVWLSEIMLQQTQVQTVIPYYERFLAT 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E+ L +G Y ++ N+ + +++++ K PQT L +L GI
Sbjct: 61 FPTVEDLSAAPEELLLKTWEGLGYYS-RARNLQKAAKQVVDDYQGKWPQTSAELEKLAGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+ FG +D + FR+ +R + K + ++L +IP
Sbjct: 120 GPYTAGAIASICFGEVVPAIDGNAFRVFSRLLKIDADIVNPKNRSIFYDAILPLIPKDRP 179
Query: 192 YNAHYWLVLHGRYVCKARKP 211
+ + ++ G VC A+ P
Sbjct: 180 GDFNQAVMDFGSQVCTAKNP 199
>gi|37521390|ref|NP_924767.1| endonuclease III [Gloeobacter violaceus PCC 7421]
gi|35212387|dbj|BAC89762.1| endonuclease III [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP + + + + +G + + ++V+ ++S ++ + ++ +F
Sbjct: 6 MVTPGGVRAVMEGLAATY-RGRGSVELGEPYRVLVSTVISQRTREEQTTAVSQRVFARYP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A EK+L + K +I+++ IL+ ++ ++P ++ L LPGIGR
Sbjct: 65 DMASLAAADEKELLVLLAGSEYREAKGPRLIAMATILLEKYGGRVPDDIDALLALPGIGR 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN +L AF I VDTH+ +I+NR+G KTP + E++L ++P ++
Sbjct: 125 KTANCVLIYAFNREAICVDTHMHKIANRLGWVTTKTPEQTEKALEVVMPRDLWAGSNRLF 184
Query: 199 VLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
+ HGR +C + P C C + C ++
Sbjct: 185 LQHGRAICLSGAPPLCSRCPVRPWCAYGQE 214
>gi|86608236|ref|YP_476998.1| A/G-specific adenine glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556778|gb|ABD01735.1| A/G-specific adenine glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 358
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 7/202 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + + + + V+ ++ Q+ V + + + A +
Sbjct: 5 LQRWYREHGRDLPWRRTRDPYAIWVSEVMLQQTQVATVIPYFQRWMQTLPGIPALAAAPQ 64
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++ +G YR+ N+ + IL+ E + + P+ LE + LPGIGR A ILS A
Sbjct: 65 QQVLKLWEGLGYYRRAL-NLHKAAQILMRERNGEFPRDLEQVLALPGIGRTTAGGILSAA 123
Query: 149 FGIPTIGVDTHIFRISNRIGLAPG---KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
F P +D ++ R+ R+ + + Q +++ P + L+ G V
Sbjct: 124 FDQPLPILDGNVKRVLARLVALQQPPSQCLPLLWQLSQQLLDPVQPRAFNQALMDLGATV 183
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C+ +KP C C C +
Sbjct: 184 CRPKKPHCGRCPWQADCSAYNR 205
>gi|302678441|ref|XP_003028903.1| hypothetical protein SCHCODRAFT_37277 [Schizophyllum commune H4-8]
gi|300102592|gb|EFI94000.1| hypothetical protein SCHCODRAFT_37277 [Schizophyllum commune H4-8]
Length = 483
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 16/205 (7%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + + V+ ++ Q+ V E T + + +
Sbjct: 39 PEATRDERAQRAYEVWVSEIMLQQTQVSTVIAYYNRWMEKFPTLADLANANIDDVNALWK 98
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + + E +PGIGR A I S+A+G +
Sbjct: 99 GLGYYSRAKRLLEGAQKAVKDYGGQLPDNAKEMQANIPGIGRYSAGAICSIAYGERVPVL 158
Query: 157 DTHIFRISNRIGLAPGKTPNKV----------------EQSLLRIIPPKHQYNAHYWLVL 200
D ++ R+ +R+ K E ++ + P +H + + L+
Sbjct: 159 DGNVHRLMSRVLALHANPKAKATLDLLWTAAEAMVVTPEPAIDTVGPMQHAGDINQALIE 218
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G VCK + P C SC IS+ CK
Sbjct: 219 LGSTVCKVKDPNCASCPISSWCKAY 243
>gi|224026371|ref|ZP_03644737.1| hypothetical protein BACCOPRO_03127 [Bacteroides coprophilus DSM
18228]
gi|224019607|gb|EEF77605.1| hypothetical protein BACCOPRO_03127 [Bacteroides coprophilus DSM
18228]
Length = 355
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 75/210 (35%), Gaps = 11/210 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + + EL + + + + ++ ++ Q+ E
Sbjct: 3 VNQFSESLIRWYELHRRELPWRETKDPYRIWISEIILQQTRVAQGYAYYCRFIERFPDVC 62
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ + +G Y + + + +P+T + + + G+G A
Sbjct: 63 SLAEAHEDEVMKMWQGLGYYSRARNLHEAARSLAGRGR---LPETYKEVRAMKGVGDYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHY 196
I S A+ +P VD +++R+ +R + +++ KH +
Sbjct: 120 AAICSFAYDMPCAVVDGNVYRVLSRWMGVDEPIDTAAGKKLFAQLADQLLDRKHPAVYNQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G C P CQ C +++ C ++
Sbjct: 180 AIMDFGALQCVPASPDCQVCPLADSCVALR 209
>gi|239906271|ref|YP_002953011.1| A/G-specific adenine glycosylase [Desulfovibrio magneticus RS-1]
gi|239796136|dbj|BAH75125.1| A/G-specific adenine glycosylase [Desulfovibrio magneticus RS-1]
Length = 391
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 83/204 (40%), Gaps = 9/204 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L + + +L + + + + V+ +++ Q+ V + T +
Sbjct: 10 LLLDWFAQNRRDLPWRRTYDPYGVWVSEVMAQQTQMDRVAVYFERFTARFPTVAALAEAD 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E ++ +G Y ++ N+++ + ++ E ++P L LPG+G A + ++
Sbjct: 70 ETEVLKAWEGLGYYS-RARNLLAAARRVMAEHGGRLPADFAALRALPGVGEYTAGAVAAI 128
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAHYWLVLHG 202
AFG + VD ++ R+ R+ ++ ++PP + L+ G
Sbjct: 129 AFGRDEVAVDANVLRVLARVCDIDAPIKEPAGKAQATTLARELLPPGRARDYGEALMEFG 188
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
VC+ R P C +C ++ C +
Sbjct: 189 ALVCRPRTPDCPACPLAGHCAARR 212
>gi|308050666|ref|YP_003914232.1| A/G-specific DNA-adenine glycosylase [Ferrimonas balearica DSM
9799]
gi|307632856|gb|ADN77158.1| A/G-specific DNA-adenine glycosylase [Ferrimonas balearica DSM
9799]
Length = 351
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 84/207 (40%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + ++ ++ Q+ V E T +
Sbjct: 10 KRMLDWYQQYGRKDLPWQQNRTPYRVWLSEIMLQQTQVTTVIPYYLKFTERFPTLIDLAN 69
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +G Y ++ N++ + + ++ + + P ++ + LPGIGR A IL
Sbjct: 70 AEDDEVMHLWTGLGYYA-RARNLLKAARQVRDQHNGEFPTQIDQVMALPGIGRSTAGAIL 128
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVL 200
S++ P +D ++ R+ R G NK VE L + P + + ++
Sbjct: 129 SLSLDQPHPILDGNVKRVLARHQAIEGWPGNKAVENQLWDLTTTLTPAQQVQPYNQAMMD 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G C KP C +C +++ C+ Q
Sbjct: 189 LGASHCSRSKPNCPACPVNDDCRAYAQ 215
>gi|261342377|ref|ZP_05970235.1| A/G-specific adenine glycosylase [Enterobacter cancerogenus ATCC
35316]
gi|288315012|gb|EFC53950.1| A/G-specific adenine glycosylase [Enterobacter cancerogenus ATCC
35316]
Length = 352
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVATRHNGTFPETFDEVADLPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L I P + ++ G VC KP+C+ C ++N
Sbjct: 149 RCYAVDGWPGKKEVEKRLWDISEAVTPANGVERFNQAMMDLGAMVCTRSKPKCELCPVNN 208
Query: 221 LCKRI 225
LC
Sbjct: 209 LCVAY 213
>gi|146313005|ref|YP_001178079.1| adenine DNA glycosylase [Enterobacter sp. 638]
gi|145319881|gb|ABP62028.1| A/G-specific DNA-adenine glycosylase [Enterobacter sp. 638]
Length = 352
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVATVIPYFERFMTRFPTITDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ K P+T E + LPG+GR A +LS++ G +D ++ R+
Sbjct: 89 RNLHKAAQLVATTHQGKFPETFEEVAALPGVGRSTAGAVLSLSLGKHFPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L I P K + ++ G VC KP+C+ C ++N
Sbjct: 149 RCYAVDGWPGKKEVEKRLWEISEAVTPAKGVERFNQAMMDLGAIVCTRSKPKCELCPVNN 208
Query: 221 LCKRI 225
LC
Sbjct: 209 LCMAY 213
>gi|56461083|ref|YP_156364.1| A/G-specific DNA glycosylase [Idiomarina loihiensis L2TR]
gi|56180093|gb|AAV82815.1| A/G-specific DNA glycosylase [Idiomarina loihiensis L2TR]
Length = 346
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 81/195 (41%), Gaps = 7/195 (3%)
Query: 34 LKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + V+ ++ Q+ V + T Q++ + + K+
Sbjct: 14 QQYGRKHLPWQKNVTPYRVWVSEIMLQQTQVTTVIPYFERFMATFPTVQELASAPQDKVL 73
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
N +G Y ++ N+ + ++ E++ + P+ + L +LPG+GR A I S+ G
Sbjct: 74 NLWTGLGYYA-RARNLHKTAKLVCTEYNGEFPKKVHELEQLPGVGRSTAGAIRSLGHGEY 132
Query: 153 TIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ R G ++ Q ++ P + + ++ G +C
Sbjct: 133 APILDGNVKRVLARHFAVSGWPGKADVLKQLWQLSEQLTPKQDSGAYNQAMMDIGAMICT 192
Query: 208 ARKPQCQSCIISNLC 222
KP C+ C +++ C
Sbjct: 193 RSKPLCEQCPVNSTC 207
>gi|227538865|ref|ZP_03968914.1| possible adenine glycosylase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241374|gb|EEI91389.1| possible adenine glycosylase [Sphingobacterium spiritivorum ATCC
33300]
Length = 349
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 77/206 (37%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ E T Q +
Sbjct: 5 KRLIAWYDQHGRDLPWRHTQDPYIIWLSEIILQQTRVEQGMPYFMRFSEQYPTVQDFASA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + N + +G Y + N+ + +++++F P + + +LPG+G A I S
Sbjct: 65 DEDHILNLWQGLGYYS-RGRNMHKAARMVVSDFAGIFPTAYDEVIKLPGVGEYTAAAISS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ +D ++FR+ +R + + ++ + ++
Sbjct: 124 ISANQAKAVLDGNVFRVLSRYFGVEVEINTPAGKKVFTELANEMLDADDPARYNQAIMDF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C CI + C +K+
Sbjct: 184 GAMQCKPKSPACGICIFNQECVALKE 209
>gi|126738671|ref|ZP_01754376.1| A/G-specific adenine glycosylase [Roseobacter sp. SK209-2-6]
gi|126720470|gb|EBA17176.1| A/G-specific adenine glycosylase [Roseobacter sp. SK209-2-6]
Length = 354
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 71/206 (34%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + + ++ ++ Q+T V + + +
Sbjct: 15 LLSWYDKHARKMPWRVPPLDRLAGHEPDPYRVWLSEVMLQQTTVAAVIEYFQRFTARWPS 74
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + +G Y ++ N++ + ++ + P + L +LPGIG
Sbjct: 75 VVDLANAEDADVMAEWAGLGYYA-RARNLLKCARVVAQDLGGAFPDSYAELLKLPGIGPY 133
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ---SLLRIIPPKHQYNAHY 196
A I S+AF +D ++ R+ R+ P E + P +
Sbjct: 134 TAAAIASIAFDRAETVLDGNVERVMARLHDIHDPLPGSKELLRGHAATLTPSTRPGDYAQ 193
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + P C C C
Sbjct: 194 AVMDLGATICTPKSPACGICPWREPC 219
>gi|307609690|emb|CBW99199.1| hypothetical protein LPW_09811 [Legionella pneumophila 130b]
Length = 355
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + + V+ ++ Q+ V E +
Sbjct: 12 QLLLDWYDLHGRKDLPWQLPRSPYRVWVSEIMLQQTQVQTVIPYFNRFIEHFPDIFLLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ + +G Y ++ N+ + + I+ ++++ P+ L L +LPGIG A IL
Sbjct: 72 AEEDEVLSLWSGLGYYS-RARNLHNTAKIISDQYNGVFPEDLNILVQLPGIGPSTAAAIL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVL 200
S AF P +D ++ R+ +R L G +V++ L + +P + + ++
Sbjct: 131 SQAFNKPAAILDGNVKRVLSRFFLIEGWPEQAQVKKKLWGLASSCMPNERCADYTQAIMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G C + PQC C + N C
Sbjct: 191 LGATCCTNKNPQCLRCPVKNHCLAF 215
>gi|296876555|ref|ZP_06900606.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis ATCC
15912]
gi|296432548|gb|EFH18344.1| A/G-specific adenine glycosylase [Streptococcus parasanguinis ATCC
15912]
Length = 384
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 82/216 (37%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + + + K +L + + + + ++ ++ Q+ V + +
Sbjct: 11 MWEEEKIASFREKLLVWYDAHKRDLPWRRTQDPYKIWISEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+KL +G Y + N+ + ++ P + E +++L G
Sbjct: 71 WFPTVADLAQAPEEKLLKAWEGLGYYS-RVRNMQKAAQQIMENHGGVFPSSYEEISKLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+P VD ++ R+ R + + + +I P
Sbjct: 130 IGPYTAGAIASIAFGLPEPAVDGNVMRVLARLFEVDYDIGVPTNRKIFQAMMEILIDPAR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPEESPVKEFSAAYQ 225
>gi|256851158|ref|ZP_05556547.1| endonuclease III [Lactobacillus jensenii 27-2-CHN]
gi|260660582|ref|ZP_05861497.1| endonuclease III [Lactobacillus jensenii 115-3-CHN]
gi|282934624|ref|ZP_06339867.1| endonuclease III [Lactobacillus jensenii 208-1]
gi|256616220|gb|EEU21408.1| endonuclease III [Lactobacillus jensenii 27-2-CHN]
gi|260548304|gb|EEX24279.1| endonuclease III [Lactobacillus jensenii 115-3-CHN]
gi|281301199|gb|EFA93500.1| endonuclease III [Lactobacillus jensenii 208-1]
Length = 217
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L +E ++ +P KGEL + N F L+ AV +SAQ+TD VN+ T LF
Sbjct: 15 LLNDEEALKVLNRILAMYPDAKGELNWDNVFHLVCAVAISAQTTDKMVNRVTPKLFSDYP 74
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M K L+ I IG++R K++++ ++ IL+ FD ++P+ + L LPG+G
Sbjct: 75 TPADMAQADIKDLEADISKIGLFRSKAKHLKEMAQILVENFDGEVPKDKKLLMTLPGVGE 134
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ A+G+P I VDTH+ RIS + + P P+++E+ L I+P + H+
Sbjct: 135 KTANVVLAEAYGVPAIAVDTHVARISKKFKIVPENAKPHEIEKRLEEILPKEQWIKTHHA 194
Query: 198 LVLHGRYVCKAR 209
++ GRY AR
Sbjct: 195 MIFFGRYTMPAR 206
>gi|163846363|ref|YP_001634407.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222524128|ref|YP_002568599.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
gi|163667652|gb|ABY34018.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222448007|gb|ACM52273.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
Length = 220
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 6/207 (2%)
Query: 25 LEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+E++ + L F +++A +LS ++ D LF +AD
Sbjct: 8 IEQVLDTLERELAVYTPPLIDQMGEVSQTPFRILIATILSLRTKDTLTAVVAPRLFAVAD 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M+A+G +++ I +G YR K++ I+ + IL+ ++ ++P L+ L +LPG+GR
Sbjct: 68 TPAAMVALGAERIAELIYPVGFYRVKAQQIVHICQILLERYNGEVPADLDELLKLPGVGR 127
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++++ FG+P I VD H+ RI NR G +TP + E +L +P ++ + L
Sbjct: 128 KTANLVVTAGFGLPGICVDIHVHRICNRWGYVQTRTPEETEMALRARLPQRYWIPINRLL 187
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
V G+ +C P+C C I +C RI
Sbjct: 188 VTLGQNICHPTSPRCSICPIREVCPRI 214
>gi|256374498|ref|YP_003098158.1| HhH-GPD family protein [Actinosynnema mirum DSM 43827]
gi|255918801|gb|ACU34312.1| HhH-GPD family protein [Actinosynnema mirum DSM 43827]
Length = 329
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 11/205 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + + ++V+ ++ Q+ V + + P M A
Sbjct: 45 LNTWFAATARDLPWRDPECTAWGVLVSEIMLQQTPVARVEPIWRVWLDKWPRPSDMAAAS 104
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G R+ + + D L LPGIG A + +
Sbjct: 105 QGEVLRMWGKLGYPRRALRLHAAAQAVAAEHDDVVPDDVE-TLLALPGIGAYTARAVAAF 163
Query: 148 AFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPPKHQYN--AHYWLVLH 201
A+G VDT++ R+ R G P+ + + ++P L+
Sbjct: 164 AYGRRCPVVDTNVRRVVARAVHGAGDAGPPSTTRDLRDVEALLPEDEASAATYSAALMEL 223
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G VC AR P+C +C + C+ +
Sbjct: 224 GALVCTARTPRCSACPVLGSCQWQR 248
>gi|149203472|ref|ZP_01880442.1| A/G-specific adenine glycosylase [Roseovarius sp. TM1035]
gi|149143305|gb|EDM31344.1| A/G-specific adenine glycosylase [Roseovarius sp. TM1035]
Length = 353
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P+ + + + + + ++ ++ Q+T V + T + A + ++
Sbjct: 27 PAARAAGAHPDPYRIWLSEVMLQQTTVAAVKSYFLRFTTLWPTVADLAAAEDAQVMGEWA 86
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N++ + +++ + + P TL+GL LPGIG A I ++A+ P + V
Sbjct: 87 GLGYYA-RARNLLKCARVVVRDHGGRFPDTLDGLRALPGIGPYTAAAIAAIAYDQPHVVV 145
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQ---SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ R+ P + R+ P + ++ G +C + P C
Sbjct: 146 DGNVERVMARLYDIHTPLPTAKRALTEAAARLTPRLRPGDYAQAVMDLGATICTPKSPAC 205
Query: 214 QSCIISNLC 222
C C
Sbjct: 206 GLCPWRAPC 214
>gi|117620493|ref|YP_858235.1| A/G-specific adenine glycosylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561900|gb|ABK38848.1| A/G-specific adenine glycosylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 353
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 10/202 (4%)
Query: 31 LFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + V+ ++ Q+ V + +
Sbjct: 12 RILDWYQLHGRKTLPWQQEKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVLALADA 71
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ ++ +G Y ++ N+ + + + P+ LE + LPGIGR A +LS
Sbjct: 72 PIDEVLHHWTGLGYYA-RARNLHKAAQQIRDLHGGLFPERLEEVMALPGIGRSTAGAVLS 130
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLH 201
++ G P +D ++ R+ R PG +VE L + P + + ++
Sbjct: 131 LSLGQPHAILDGNVKRVLTRWLALPGWPGQKQVENDLWELATRFTPKLGVAHYNQAMMDM 190
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
G VC KP C+ C + C+
Sbjct: 191 GATVCTRSKPACERCPVREDCQ 212
>gi|29654260|ref|NP_819952.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii RSA 493]
gi|161830170|ref|YP_001596768.1| A/G-specific adenine glycosylase [Coxiella burnetii RSA 331]
gi|29541526|gb|AAO90466.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii RSA 493]
gi|161762037|gb|ABX77679.1| A/G-specific adenine glycosylase [Coxiella burnetii RSA 331]
Length = 354
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 8/214 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + + F ++ + + V+ ++ Q+ V + +
Sbjct: 1 MDSKQFAQGVLRWF-DRYGRHDLPWQKKLTPYRVWVSEIMLQQTQVSTVIPYFERFIKRF 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + ++ + +G Y ++ N+ + I+ + + P T+E L+ LPGIG
Sbjct: 60 PTVGALALAPLDEILAHWSGLGYYA-RARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIG 118
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQY 192
R A +LS+ + +D ++ R+ R +V + P +
Sbjct: 119 RSTAGAVLSLGMHQYAVILDGNVKRVLARYNALDVPINQQVGINILWSLAEKYTPKNRCW 178
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G +C KP+C C + + CK +
Sbjct: 179 DYNQAMMDIGAMICTRTKPKCSLCPLKSSCKAHR 212
>gi|119384829|ref|YP_915885.1| HhH-GPD family protein [Paracoccus denitrificans PD1222]
gi|119374596|gb|ABL70189.1| A/G-specific DNA-adenine glycosylase [Paracoccus denitrificans
PD1222]
Length = 328
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 6/179 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+T V + + T + A + ++ +G Y +
Sbjct: 9 DPYRVWLSEVMLQQTTVAAVKAYFERFTSLWPTVHDLAAAEDAQVMAEWAGLGYYARARN 68
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
I + P T L LPGIG + I ++AF P VD ++ R+ R
Sbjct: 69 LI---ACARAVSAMGAFPDTRAELADLPGIGAYTSAAIAAIAFDRPETVVDGNVERVVAR 125
Query: 167 IGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P ++ + P + + ++ G +C R P C C + + C
Sbjct: 126 LFAVETPLPAAKPELVALAAGLTPSERPGDFAQAMMDLGATICTPRSPACGICPVIDHC 184
>gi|319399835|gb|EFV88082.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
FRI909]
Length = 347
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 8 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 64 SLSEASEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPETFKKLKGVGPYTQ 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 123 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELQPYVLKDAGTFNQA 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 183 MMELGALVCTPKSPLCLFCPIQEHCEAF 210
>gi|327537206|gb|EGF23952.1| A/G-specific adenine glycosylase [Rhodopirellula baltica WH47]
Length = 367
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 84/208 (40%), Gaps = 16/208 (7%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + T + +
Sbjct: 3 KRLLSWFSDNARDLPWRRDHSPYRVWISEIMCQQTQVATVLPYFERFLSTYPTIRDLADA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E +L +G YR ++ ++ + + ++ E + + P++ + + LPGIGR A I S
Sbjct: 63 DESQLMRMWEGLGYYR-RARSLHAAAKKMVEEHNGEFPESFDDVLALPGIGRYTAGAIQS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYN-------A 194
++ ++ + R+ +R KV Q+ L +++P + +
Sbjct: 122 ISRNKAFPILEGNTQRVFSRWIGLTVPPTEKVAQARLWELSDKMLPRRKADDRSNGPAGF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + G +C R P+C C ++ +C
Sbjct: 182 NQAAMELGALICSPRSPKCDECPVATMC 209
>gi|86605515|ref|YP_474278.1| A/G-specific adenine glycosylase [Synechococcus sp. JA-3-3Ab]
gi|86554057|gb|ABC99015.1| A/G-specific adenine glycosylase [Synechococcus sp. JA-3-3Ab]
Length = 358
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 88/209 (42%), Gaps = 7/209 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++ + + +L + + + + VA ++ Q+ V + E
Sbjct: 1 MQRLRQSLQRWYCQQGRDLPWRRTRDPYAIWVAEVMLQQTQVATVIPYFQRWMEALPGIP 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ ++++ +G YR+ N+ + IL+ E + P+ LE + LPGIGR A
Sbjct: 61 ELATAPQQQVLKLWEGLGYYRRAL-NLHRAAQILMQEHGGQFPRNLEQVLALPGIGRTTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGK---TPNKVEQSLLRIIPPKHQYNAHYWL 198
ILS AF +P ++ ++ R+ R+ P + + +++ P+ + L
Sbjct: 120 GGILSAAFDLPLPILEGNVKRVLARLVALPQPPARCLPLLWRLSQQLLDPEQPRTFNQAL 179
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G +C+ R+P+C C C +
Sbjct: 180 MDLGATICRPRQPRCGQCPWQADCAAYNR 208
>gi|259909624|ref|YP_002649980.1| adenine DNA glycosylase [Erwinia pyrifoliae Ep1/96]
gi|224965246|emb|CAX56778.1| A/G-specific adenine glycosylase [Erwinia pyrifoliae Ep1/96]
gi|283479702|emb|CAY75618.1| A/G-specific adenine glycosylase [Erwinia pyrifoliae DSM 12163]
Length = 358
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPNVSDLAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + P T + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQTVVEKHGGVFPHTFAEVADLPGVGRSTAGAILSLALGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + ++ G VC KP+C+ C ++
Sbjct: 147 RCYAVAGWPARKEVEKRLWQISEEVTPANGVRQFNQAMMDLGAMVCTRSKPKCEICPLNT 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCIAY 211
>gi|221109008|ref|XP_002168828.1| PREDICTED: similar to Probable endonuclease III homolog [Hydra
magnipapillata]
Length = 213
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ PK+ + I K+ K L Y N + L+VAVLLSAQ +D ++NK H E
Sbjct: 1 MDLFTPPKDWKTILQPIIDKYKGRKHPLEYSNLYELMVAVLLSAQDSDAHINKIMPHFIE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++N I + + K+ + ++ L + IP TL L +L G
Sbjct: 61 KYPNLEAIKNSSLNAIENIIAPVMNSKNKASWLYEIAKTLEKNEN--IPLTLHNLIQLKG 118
Query: 136 IGRKGANVILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRIIPPKHQYN 193
IGRK ANVIL I D H+ R++ RIGL NK+E+ L+ I+P +
Sbjct: 119 IGRKSANVILREMNQPAEGIIADLHVIRVTPRIGLTDESKDGNKIEKQLMSILPKQIWNE 178
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L GR +C+ P+C C + N C K
Sbjct: 179 IGMALSFLGREICRPTNPKCPICPLKNDCNYFK 211
>gi|240172175|ref|ZP_04750834.1| MutY [Mycobacterium kansasii ATCC 12478]
Length = 303
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V T A
Sbjct: 21 LLAWYERSRRDLPWRRPDVGAWQILVSEFMLQQTPVSRVLSIWPDWVRRWPTASATAAAT 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + I+ + + +P +E L +LPG+G A +
Sbjct: 81 AADVLRAWGKLGY-PRRAKRLHECATIIARDHGDVVPDDVETLVKLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKH-QYNAHYWLVLHG 202
A+G VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 140 AYGQRVPVVDTNVRRVVARAVHGRADAGASSAARDHADVLALLPNSAVAKHFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C SC +S+ C
Sbjct: 200 ATVCTARAPRCGSCPLSD-C 218
>gi|85709144|ref|ZP_01040210.1| hypothetical protein NAP1_07875 [Erythrobacter sp. NAP1]
gi|85690678|gb|EAQ30681.1| hypothetical protein NAP1_07875 [Erythrobacter sp. NAP1]
Length = 345
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 70/210 (33%), Gaps = 18/210 (8%)
Query: 32 FSLKWPSPKGELYYVNH------------FTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EL + N + + ++ ++ Q+T V I T
Sbjct: 9 LLDWYDKHARELPWRNPPGEPAPNDPAWPYRVWLSEVMLQQTTVAAVKPYFAKFTTIWPT 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++ +G Y + + P T L LPG+G
Sbjct: 69 VFDLAGASDDEVMAAWAGLGYYSRARNLV---KCAREVASRGGFPSTEPELRELPGLGAY 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A I ++AFG + VD ++ R+ R+ P + I P +
Sbjct: 126 TAAAIAAIAFGERAVVVDANVERVVARLFDIEEPLPGARKPIRARADEITPGHRAGDFAQ 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G +C + P+C C +S C+ K
Sbjct: 186 AMMDLGSQICTTKAPRCLLCPLSEECEGRK 215
>gi|329726869|gb|EGG63327.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
VCU144]
Length = 347
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 8 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 64 SLSEANEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGPYTQ 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 123 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELHPYVLKDAGTFNQA 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 183 MMELGALVCTPKSPLCLFCPIQEHCEAF 210
>gi|229823120|ref|ZP_04449189.1| hypothetical protein GCWU000282_00417 [Catonella morbi ATCC 51271]
gi|229787286|gb|EEP23400.1| hypothetical protein GCWU000282_00417 [Catonella morbi ATCC 51271]
Length = 410
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 14/229 (6%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLL 57
M +S+ S + + + K +L + + + + V+ ++
Sbjct: 24 MTNSRSSWPQA-----MVAWDQARVHAFRKDLLAWYDKNKRDLPWRKSQDPYAIWVSEIM 78
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + T + E+ L N + +G Y + N+ + + ++
Sbjct: 79 LQQTQVATVIPYYQRFMAALPTVADLAQAPEETLLNLWQGLGYYS-RVRNMQAAAQQVMA 137
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPN 176
+F ++P ++ L L GIG A I SMAFG +D ++FRI R L
Sbjct: 138 DFGGRMPDQVDSLLSLKGIGPYTAAAIASMAFGRVAPALDGNLFRIVARLFRLKDDIALP 197
Query: 177 KVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
K + + +I P + + ++ G V P+ + ++
Sbjct: 198 KSRKVFMEILDILIDPDRPGDFNQAMMDLGACVMTPSNPRPDNHPLAAY 246
>gi|289759747|ref|ZP_06519125.1| adenine glycosylase MutY [Mycobacterium tuberculosis T85]
gi|289715311|gb|EFD79323.1| adenine glycosylase MutY [Mycobacterium tuberculosis T85]
Length = 306
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 17 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 76
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 77 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 135
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 136 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 195
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 196 ATVCTARTPRCGLCPL-DWC 214
>gi|51598996|ref|YP_073184.1| endonuclease III [Borrelia garinii PBi]
gi|51573567|gb|AAU07592.1| endonuclease III [Borrelia garinii PBi]
Length = 205
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 103/191 (53%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ +LSA++TD VNK + +LFE + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMAILSARTTDNLVNKISPYLFERYGNFESLSRANMRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K+ NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKTGFYSRKANNIVNCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGAVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R ++ +P K+E L R I QY + HGR VC AR C+
Sbjct: 134 IVDTHFIRVIKRHAISLENSPIKIELDLKRRIESCKQYRFSMAINKHGREVCTARNVSCE 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFSPRV 204
>gi|149909457|ref|ZP_01898112.1| A/G-specific adenine glycosylase [Moritella sp. PE36]
gi|149807567|gb|EDM67516.1| A/G-specific adenine glycosylase [Moritella sp. PE36]
Length = 357
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y + ++ ++ Q+ V + T + ++ + +G Y +
Sbjct: 33 YHEPYPTWLSEVMLQQTQVSTVIPYFTTFMQKFPTVTDLANAHIDEVLHLWTGLGYYA-R 91
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
N+ + ++ +E+ P E + LPG+GR A +LS++ P +D ++ R+
Sbjct: 92 GRNLHKAAQLIRDEYQGIFPTEFEQVLALPGVGRSTAGAVLSLSLNQPHAILDGNVKRVL 151
Query: 165 NRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
R G G K + P + N + ++ G VC +P C C ++
Sbjct: 152 TRWGAIEGWYGVKAVENTLWALSEELTPQQQTANYNQVMMDLGATVCTRSRPDCDICPVN 211
Query: 220 NLCKR 224
+ CK
Sbjct: 212 DDCKA 216
>gi|323441368|gb|EGA99028.1| A/G-specific adenine glycosylase DNA repair protein [Staphylococcus
aureus O46]
Length = 345
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVFDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTDAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|294786565|ref|ZP_06751819.1| putative A/G-specific adenine glycosylase [Parascardovia
denticolens F0305]
gi|315226149|ref|ZP_07867937.1| A/G-specific adenine glycosylase [Parascardovia denticolens DSM
10105]
gi|294485398|gb|EFG33032.1| putative A/G-specific adenine glycosylase [Parascardovia
denticolens F0305]
gi|315120281|gb|EFT83413.1| A/G-specific adenine glycosylase [Parascardovia denticolens DSM
10105]
Length = 339
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
E F S W S + + + + ++++ ++S Q+ V + +
Sbjct: 47 DEAAWAFSRLSSWWRSAARDFPWRFGRTSPWGVLLSEVMSQQTPMSRVLPYWRQWMGLWP 106
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TPQ + L +G R+ + + ++ EF ++P + L LPGIG
Sbjct: 107 TPQDLAQASTGDLIAAWGRLGYPRRALR-LKECAQVVSQEFGGRLPDDYQSLVALPGIGD 165
Query: 139 KGANVILSMAFGIPTIGVDTHIFRI---SNRIGLAPGKTPNKVEQS-LLRIIPPKHQY-- 192
A+ ILS A+G + +DT+I R+ + + G + K E+ ++P
Sbjct: 166 YTASAILSFAYGDRVVVLDTNIRRVLVRAFTGQESRGGSTTKGERDLAQSLLPADRAQSV 225
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C A +P C C + C
Sbjct: 226 RWNQAVMELGALICTASQPACDQCPLKEKC 255
>gi|85860567|ref|YP_462769.1| endonuclease III N [Syntrophus aciditrophicus SB]
gi|85723658|gb|ABC78601.1| endonuclease III N [Syntrophus aciditrophicus SB]
Length = 206
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 6/206 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + + + + + + F ++++ +LS ++ D AT+ L
Sbjct: 1 MEKERIALLIQKLEDSAGAAEFPIVTQLAETRRDPFLILISTVLSLRTKDEVTATATERL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A TP+ ML + E++++ I +G YR KS I + LI F +++P +LE L L
Sbjct: 61 FSLASTPETMLELSEEEIRQAIYPVGFYRNKSRQIREICRDLIERFSSRVPDSLEDLLSL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G+K AN++LS+ F I VDTH+ RISNR+GL KTP + E +L ++P ++
Sbjct: 121 KGVGQKTANLVLSLGFEKDAICVDTHVHRISNRLGLVSTKTPEQTESALQNVLPRRYWSR 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIIS 219
+ LV G+ VC+ P C SC +
Sbjct: 181 YNTLLVSFGQRVCRPLSPLCSSCPLC 206
>gi|216263592|ref|ZP_03435587.1| endonuclease III [Borrelia afzelii ACA-1]
gi|215980436|gb|EEC21257.1| endonuclease III [Borrelia afzelii ACA-1]
Length = 205
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYGNFESLSRANVRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NII+ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKTGFYSRKAKNIINCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + HGR +C +R C
Sbjct: 134 IVDTHFSRVITRHALSLENSPIKIELDLKRRIKPCKQYRFSMAINKHGREICTSRNVSCV 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRV 204
>gi|145297587|ref|YP_001140428.1| A/G-specific adenine glycosylase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850359|gb|ABO88680.1| A/G-specific adenine glycosylase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 353
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 80/202 (39%), Gaps = 10/202 (4%)
Query: 31 LFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + V+ ++ Q+ V + Q +
Sbjct: 12 RILDWYQVHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVQALADA 71
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ ++ +G Y ++ N+ + + + D P+ LE + LPGIGR A +LS
Sbjct: 72 PIDEVLHHWTGLGYYA-RARNLHKAAQQIRDLHDGLFPERLEEVMALPGIGRSTAGAVLS 130
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLH 201
++ G P +D ++ R+ R PG +VE L R+ P + + ++
Sbjct: 131 LSLGQPHAILDGNVKRVLTRWLALPGWPGQKQVENDLWELAIRLTPKLGVAHYNQAMMDM 190
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
G VC KP C C + C+
Sbjct: 191 GATVCTRSKPACDRCPVQTDCQ 212
>gi|329998619|ref|ZP_08303184.1| A/G-specific adenine glycosylase [Klebsiella sp. MS 92-3]
gi|328538600|gb|EGF64701.1| A/G-specific adenine glycosylase [Klebsiella sp. MS 92-3]
Length = 352
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVTTLHGGEFPRTFDEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C+ C +SN
Sbjct: 149 RCYAVSGWPGKKEVEKRLWDISEEVTPAEGVERFNQAMMDLGAMVCTRSKPKCELCPLSN 208
Query: 221 LCKRI 225
C
Sbjct: 209 GCVAY 213
>gi|239626152|ref|ZP_04669183.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520382|gb|EEQ60248.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 391
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 10/219 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKA 69
L + L+ + + S L + + + + ++ ++ Q+ V
Sbjct: 17 EREQAPLGREERLKAMEKPLLAWYGSRARSLPWRDDPKPYRVWISEIMLQQTRVEAVKPY 76
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ + + + + L +G Y ++ N+ + + +++ E+ +P + E
Sbjct: 77 FERFMKAFPEVRDLAGAEDDYLMKMWEGLGYYN-RARNLKAAARMVMEEYGGCLPASFEE 135
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLR 184
L +LPGIG A I S+AFGIP VD ++ R+ +R+ G +EQ L
Sbjct: 136 LIKLPGIGSYTAGAIASIAFGIPMPAVDGNVLRVISRVLGDRGDIRKASVKAGMEQELKA 195
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLC 222
++P + L+ G VC P+C C ++++C
Sbjct: 196 VMPSGDASRYNQGLIEIGALVCIPGGEPRCGECPLASVC 234
>gi|289755717|ref|ZP_06515095.1| adenine glycosylase MutY [Mycobacterium tuberculosis EAS054]
gi|289696304|gb|EFD63733.1| adenine glycosylase MutY [Mycobacterium tuberculosis EAS054]
gi|323717783|gb|EGB26981.1| adenine glycosylase mutY [Mycobacterium tuberculosis CDC1551A]
Length = 307
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 24 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 83
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 84 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 142
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 143 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 202
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 203 ATVCTARTPRCGLCPL-DWC 221
>gi|148360455|ref|YP_001251662.1| A/G specific adenine glycosylase [Legionella pneumophila str.
Corby]
gi|148282228|gb|ABQ56316.1| A/G specific adenine glycosylase [Legionella pneumophila str.
Corby]
Length = 355
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + + V+ ++ Q+ V E +
Sbjct: 12 QLLLDWYDLHGRKDLPWQLPRSPYRVWVSEIMLQQTQVQTVIPYFNRFIEHFPDIFLLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ + +G Y ++ N+ + + I+ ++++ P+ L L +LPGIG A IL
Sbjct: 72 AEEDEVLSLWSGLGYYS-RARNLHNTAKIISDQYNGVFPEDLNILVQLPGIGPSTAAAIL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVL 200
S AF P +D ++ R+ +R L G +V++ L + +P + + ++
Sbjct: 131 SQAFNKPAAILDGNVKRVLSRFFLIEGWPEQAQVKKKLWGLASSCMPNERCADYTQAIMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C + N C
Sbjct: 191 LGATCCTNKNPHCLRCPVKNHCLAF 215
>gi|238795061|ref|ZP_04638654.1| A/G-specific adenine glycosylase [Yersinia intermedia ATCC 29909]
gi|238725609|gb|EEQ17170.1| A/G-specific adenine glycosylase [Yersinia intermedia ATCC 29909]
Length = 371
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V +
Sbjct: 20 QAQQFAHEVLEWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 79
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 80 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDEILALPGIGRS 138
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS++ G +D ++ R+ R G K + Q + P +
Sbjct: 139 TAGAILSLSLGKHFPILDGNVKRVLARCYAVKGWPGKKEVEGHLWQISEDVTPAQGVGQF 198
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 199 NQAMMDLGATVCTRSKPKCELCPLNTGCMAY 229
>gi|283788518|ref|YP_003368383.1| A/G-specific adenine glycosylase [Citrobacter rodentium ICC168]
gi|282951972|emb|CBG91699.1| A/G-specific adenine glycosylase [Citrobacter rodentium ICC168]
Length = 360
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMRHFPTVNDLAHAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A +LS++ G P +D ++ R+
Sbjct: 87 RNLHKAAQQVATRHNGIFPETFDEVAALPGVGRSTAGAVLSLSLGKPFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVEKRLWELSEAVTPVNGVERFNQAMMDLGAMVCTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|261822646|ref|YP_003260752.1| adenine DNA glycosylase [Pectobacterium wasabiae WPP163]
gi|261606659|gb|ACX89145.1| A/G-specific adenine glycosylase [Pectobacterium wasabiae WPP163]
Length = 368
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 82/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFAHQVLDWYQRYGRKTLPWQLEKTPYKVWLSEVMLQQTQVTTVIPYFQRFMARFPN 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N+ + +++ P T + + LPG+GR
Sbjct: 63 VNALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVSRHGGDFPTTFDEVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLR----IIPPKHQYNA 194
A +LS++ G +D ++ R+ R G +VE+ L + P +
Sbjct: 122 TAGAVLSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEKKLWARSEDVTPAEGVSQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC +P+C+ C ++ C
Sbjct: 182 NQAMMDLGAMVCTRSRPKCELCPLNTGCIAY 212
>gi|308369168|ref|ZP_07416810.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu002]
gi|308371393|ref|ZP_07424818.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu003]
gi|308372589|ref|ZP_07429183.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu004]
gi|308374923|ref|ZP_07442097.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu007]
gi|308376168|ref|ZP_07437885.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu008]
gi|308379550|ref|ZP_07486722.2| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu010]
gi|308328568|gb|EFP17419.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu002]
gi|308328984|gb|EFP17835.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu003]
gi|308332806|gb|EFP21657.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu004]
gi|308348103|gb|EFP36954.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu007]
gi|308352026|gb|EFP40877.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu008]
gi|308356663|gb|EFP45514.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu010]
Length = 295
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 12 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 72 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 130
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 131 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 190
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 191 ATVCTARTPRCGLCPL-DWC 209
>gi|300870285|ref|YP_003785156.1| endonuclease III [Brachyspira pilosicoli 95/1000]
gi|300687984|gb|ADK30655.1| endonuclease III, putative [Brachyspira pilosicoli 95/1000]
Length = 217
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 116/214 (54%), Gaps = 7/214 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGE-------LYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
K++ I + S + + + ++++ +LS ++ D A+
Sbjct: 1 MNDKDIHPIMKELTKVTKSMPMPVVTEIKLITNRDAYKILISTMLSLRTKDPTTRDASMR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LFE A + ++M+ + E+++ I +G Y K++NI+ +SH++I++++ ++P ++ L +
Sbjct: 61 LFEKAGSAKEMIKLTEEEIAKLIYPVGFYNVKAKNILEVSHMIIDDYNGEVPDEIDELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN++++ AF I VDTH+ RISNR G KTP + E +L +P ++
Sbjct: 121 LKGVGRKVANLVVTEAFDKDGICVDTHVHRISNRFGYVHTKTPEETEFALREKLPKEYWR 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ LV++G+ +CK P C C +S C K
Sbjct: 181 VYNDTLVVYGQNLCKPISPLCSECTVSQYCDYFK 214
>gi|260202777|ref|ZP_05770268.1| adenine glycosylase mutY [Mycobacterium tuberculosis K85]
gi|289572241|ref|ZP_06452468.1| adenine glycosylase mutY [Mycobacterium tuberculosis K85]
gi|289536672|gb|EFD41250.1| adenine glycosylase mutY [Mycobacterium tuberculosis K85]
Length = 304
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 140 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 200 ATVCTARTPRCGLCPL-DWC 218
>gi|328544983|ref|YP_004305092.1| a/g-specific adenine glycosylase protein [polymorphum gilvum
SL003B-26A1]
gi|326414725|gb|ADZ71788.1| Probable a/g-specific adenine glycosylase protein [Polymorphum
gilvum SL003B-26A1]
Length = 362
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 78/206 (37%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 18 LLDWYDRHARDLPWRIAPDDRRAGIVPDPYHVWLSEIMLQQTTVAAVRDYYRAFLARWPN 77
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A + +G Y ++ N+ + + ++ + + P + + L LPGIG
Sbjct: 78 VEALAAADLDDVLRAWAGLGYYS-RARNLKACAEMVARDHGGRFPDSEDALRALPGIGAY 136
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHY 196
A I ++AF VD ++ R+ R+ P+ ++ ++ R+ P +
Sbjct: 137 TAAAIAAIAFDARAAVVDGNVERVMARLFRIETPLPDAKPEIRAAMDRLTPADRPGDFAQ 196
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R+P C C S C
Sbjct: 197 AVMDLGATLCTPRRPACALCPWSQAC 222
>gi|57867309|ref|YP_188975.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis RP62A]
gi|282874582|ref|ZP_06283467.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis SK135]
gi|57637967|gb|AAW54755.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis RP62A]
gi|281296721|gb|EFA89230.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis SK135]
gi|329734778|gb|EGG71084.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
VCU045]
gi|329734864|gb|EGG71169.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
VCU028]
Length = 347
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 8 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 64 SLSEANEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGPYTQ 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 123 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELHPYVLKDAGTFNQA 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 183 MMELGALVCTPKSPLCLFCPIQEHCEAF 210
>gi|159042584|ref|YP_001531378.1| A/G-specific adenine glycosylase [Dinoroseobacter shibae DFL 12]
gi|157910344|gb|ABV91777.1| A/G-specific adenine glycosylase [Dinoroseobacter shibae DFL 12]
Length = 364
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 4/189 (2%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P+ + + + + ++ ++ Q+T V + + + A + +
Sbjct: 35 PAERAAGTRPDPYRVWLSEVMLQQTTVAAVRDYFRAFTDRWPRVTDLAAAADADVMAAWA 94
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N++ + ++ + + P T EGL LPGIG + I ++AF P V
Sbjct: 95 GLGYYA-RARNLLKCARVVTQDHGGRFPDTAEGLRALPGIGPYTSAAIAAIAFDRPETVV 153
Query: 157 DTHIFRISNRIGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ R+ P ++ ++ + P K + ++ G +C R P C
Sbjct: 154 DGNVERVMARLRGIETPLPPAKPELTEAAAALTPDKRPGDYAQAVMDLGATICTPRNPAC 213
Query: 214 QSCIISNLC 222
C + C
Sbjct: 214 GICPWRDPC 222
>gi|326497525|dbj|BAK05852.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 329
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 20/211 (9%)
Query: 32 FSLKWPSPKGELYYVNH------------FTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + +L + + + V+ ++ Q+ V T
Sbjct: 53 LLRWYDAHRRDLPWRFPAAPGREGREKRAYAVWVSEVMLQQTRVPVVIDYYSRWMARWPT 112
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++++ +G YR+ + I P T L ++ GIG
Sbjct: 113 VETLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIAEKGE---FPSTASTLRQVRGIGDY 169
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A I S+AF T VD ++ R+ +R+ + + +++ P +
Sbjct: 170 TAGAIASIAFNEVTPLVDGNVVRVISRLFAIADNPKESSTVKRFWELAGQLVDPSRPGDF 229
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C KP C C +S+ C+ +
Sbjct: 230 NQAMMELGATLCSKTKPDCSQCPVSSHCQAL 260
>gi|147819042|emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
Length = 1031
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 80/250 (32%), Gaps = 33/250 (13%)
Query: 4 SKKSDSYQGNSPLGCLYTPK----ELEEIFYLFSLKWPSPKGELYYV------------- 46
K+ + S + + E +I + K L +
Sbjct: 561 EKRKRKQRTTSEIEVMDIEDFGRDETLKIRASLLGWYDLNKRNLPWRTPTTTTTHEDEDD 620
Query: 47 ---------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+ + V+ ++ Q+ V + T + +++
Sbjct: 621 ADAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAG 680
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G YR+ + I + + L +PGIG A I S+AF VD
Sbjct: 681 LGYYRRARCLLEGAKMISEGKCGFPRTTSA--LREVPGIGNYTAGAIASIAFKEAVPVVD 738
Query: 158 THIFRISNRIGLA-----PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
++ R+ R+ T + + +++ P + + L+ G +C KP
Sbjct: 739 GNVVRVIARLKAISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPI 798
Query: 213 CQSCIISNLC 222
C +C +S+ C
Sbjct: 799 CSACPVSDQC 808
>gi|312889815|ref|ZP_07749361.1| A/G-specific adenine glycosylase [Mucilaginibacter paludis DSM
18603]
gi|311297741|gb|EFQ74864.1| A/G-specific adenine glycosylase [Mucilaginibacter paludis DSM
18603]
Length = 350
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 9/203 (4%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + N + + ++ ++ Q+ E T A E
Sbjct: 7 LLQWYNKNRRDLPWRNTTDPYIIWLSEIILQQTRVDQGMPYFYRFAEAYPTVTAFAAATE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + N++ + I+ +F+ P + L L GIG A I S A
Sbjct: 67 DEILKLWQGLGYYS-RGRNMLKTARIVQEKFNGNFPHRYDDLIALKGIGEYTAAAISSFA 125
Query: 149 FGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
VD ++ R+ R + +Q ++ + + ++ G
Sbjct: 126 ANQAKAVVDGNVSRVIARYLGISEPINSTAGKKLFQQLANELLNQQLPAMHNQAMMEFGA 185
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
C+ + P C C + C +
Sbjct: 186 LQCRPKNPDCGICPVKAGCYAYQ 208
>gi|293367818|ref|ZP_06614467.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318157|gb|EFE58554.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 356
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 17 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 73 SLSEANEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGPYTQ 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 132 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELHPYVLKDAGTFNQA 191
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 192 MMELGALVCTPKSPLCLFCPIQEHCEAF 219
>gi|108806309|ref|YP_650225.1| adenine DNA glycosylase [Yersinia pestis Antiqua]
gi|108813310|ref|YP_649077.1| adenine DNA glycosylase [Yersinia pestis Nepal516]
gi|145597869|ref|YP_001161945.1| adenine DNA glycosylase [Yersinia pestis Pestoides F]
gi|165925102|ref|ZP_02220934.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937335|ref|ZP_02225899.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010275|ref|ZP_02231173.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212877|ref|ZP_02238912.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400094|ref|ZP_02305612.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421991|ref|ZP_02313744.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426696|ref|ZP_02318449.1| A/G-specific adenine glycosylase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|270487555|ref|ZP_06204629.1| A/G-specific adenine glycosylase [Yersinia pestis KIM D27]
gi|294502885|ref|YP_003566947.1| A/G-specific adenine glycosylase [Yersinia pestis Z176003]
gi|108776958|gb|ABG19477.1| A/G-specific DNA-adenine glycosylase [Yersinia pestis Nepal516]
gi|108778222|gb|ABG12280.1| A/G-specific DNA-adenine glycosylase [Yersinia pestis Antiqua]
gi|145209565|gb|ABP38972.1| A/G-specific DNA-adenine glycosylase [Yersinia pestis Pestoides F]
gi|165914809|gb|EDR33422.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923302|gb|EDR40453.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990761|gb|EDR43062.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166206169|gb|EDR50649.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960128|gb|EDR56149.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050802|gb|EDR62210.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054299|gb|EDR64118.1| A/G-specific adenine glycosylase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|262360920|gb|ACY57641.1| A/G-specific adenine glycosylase [Yersinia pestis D106004]
gi|262364861|gb|ACY61418.1| A/G-specific adenine glycosylase [Yersinia pestis D182038]
gi|270336059|gb|EFA46836.1| A/G-specific adenine glycosylase [Yersinia pestis KIM D27]
gi|294353344|gb|ADE63685.1| A/G-specific adenine glycosylase [Yersinia pestis Z176003]
Length = 372
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 78/213 (36%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + + + + ++ ++ Q+ V +
Sbjct: 1 MMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
Q + A + + +G Y ++ N+ + +++ + P T + + LPGIG
Sbjct: 61 PDIQALAAAPLDDVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQY 192
R A ILS++ G +D ++ R+ R G K + Q + P
Sbjct: 120 RSTAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGVG 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 QFNQAMMDLGAMVCTRSKPKCELCPLNIGCMAY 212
>gi|251809926|ref|ZP_04824399.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
BCM-HMP0060]
gi|251806591|gb|EES59248.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
BCM-HMP0060]
Length = 356
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 17 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 72
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 73 SLSEANEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGPYTQ 131
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + P K +
Sbjct: 132 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFESELHPYVLKDAGTFNQA 191
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 192 MMELGALVCTPKSPLCLFCPIQEHCEAF 219
>gi|152971911|ref|YP_001337020.1| adenine DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|150956760|gb|ABR78790.1| adenine DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 352
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVATLHGGEFPRTFDEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C+ C +SN
Sbjct: 149 RCYAVSGWPGKKEVEKRLWDISEEVTPAEGVERFNQAMMDLGAMVCTRSKPKCELCPLSN 208
Query: 221 LCKRI 225
C
Sbjct: 209 GCVAY 213
>gi|302333533|gb|ADL23726.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 345
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C I C+ +
Sbjct: 188 ALICTPKNPLCLFCPIQENCEAFDK 212
>gi|120406294|ref|YP_956123.1| HhH-GPD family protein [Mycobacterium vanbaalenii PYR-1]
gi|119959112|gb|ABM16117.1| HhH-GPD family protein [Mycobacterium vanbaalenii PYR-1]
Length = 290
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + ++V+ + Q+ V TP A
Sbjct: 5 DALLDWYEHAQRDLPWRRPGVSAWQILVSEFMLQQTPVARVEPIWLDWIARWPTPSATAA 64
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
G + +G ++++ + + ++ + D+ +P +E L LPGIG A +
Sbjct: 65 AGPADILRAWGKLGY-PRRAKRLHECATVIATDHDDTVPDDVETLLTLPGIGTYTARAVA 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPPKH-QYNAHYWLVLH 201
A+ VDT++ R+ R + + + ++P L+
Sbjct: 124 CFAYRQRVPVVDTNVRRVVARAVHGLADAGSPSSRDLGDVETLLPADDTAPRFSVALMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C + C
Sbjct: 184 GATVCTARAPRCGVCPLQR-C 203
>gi|323439105|gb|EGA96835.1| A/G-specific adenine glycosylase DNA repair protein [Staphylococcus
aureus O11]
Length = 345
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTDAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|238798793|ref|ZP_04642263.1| A/G-specific adenine glycosylase [Yersinia mollaretii ATCC 43969]
gi|238717364|gb|EEQ09210.1| A/G-specific adenine glycosylase [Yersinia mollaretii ATCC 43969]
Length = 353
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFAHAVLDWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 63 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDEILALPGIGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS+A G +D ++ R+ R G K + Q + P K
Sbjct: 122 TAGAILSLALGQHFPILDGNVKRVLARCYAVEGWPGKKEVESRLWQISEEVTPAKGVGQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 182 NQAMMDLGAIVCTRSKPKCELCPLNTGCMAY 212
>gi|27468470|ref|NP_765107.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis ATCC
12228]
gi|27316017|gb|AAO05151.1|AE016749_97 A/G-specific adenine glycosylase [Staphylococcus epidermidis ATCC
12228]
Length = 347
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 9/208 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K++E+ F+ P + N + + ++ ++ Q+ V T Q
Sbjct: 8 KKDIEDWFHKNQRDMPWRET----TNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTIQ 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + + N +D ++P E +L G+G
Sbjct: 64 SLSEANEDEVLKYWEGLGYYS-RARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGPYTQ 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ + + P K +
Sbjct: 123 AAVMSIAFNHPLATVDGNVFRVWSRLNNDYRDIKLQSTRKAFEQELHPYVLKDAGTFNQA 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G VC + P C C I C+
Sbjct: 183 MMELGALVCTPKSPLCLFCPIQEHCEAF 210
>gi|162418954|ref|YP_001604780.1| adenine DNA glycosylase [Yersinia pestis Angola]
gi|162351769|gb|ABX85717.1| A/G-specific adenine glycosylase [Yersinia pestis Angola]
Length = 372
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 78/213 (36%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + + + + ++ ++ Q+ V +
Sbjct: 1 MMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
Q + A + + +G Y ++ N+ + +++ + P T + + LPGIG
Sbjct: 61 PDIQALAAAPLDDVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGIG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQY 192
R A ILS++ G +D +I R+ R G K + Q + P
Sbjct: 120 RSTAGAILSLSLGQHFPILDGNIKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGVG 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 QFNQAMMDLGAMVCTRSKPKCELCPLNIGCMAY 212
>gi|315635004|ref|ZP_07890285.1| A/G-specific adenine glycosylase [Aggregatibacter segnis ATCC
33393]
gi|315476266|gb|EFU67017.1| A/G-specific adenine glycosylase [Aggregatibacter segnis ATCC
33393]
Length = 406
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 74/185 (40%), Gaps = 6/185 (3%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + ++ ++ Q+ V + + + ++ + +G Y +
Sbjct: 59 HKTLYGVWLSEVMLQQTQVATVIPYFERFVKTFPNLTALADAPLDEVLHLWTGLGYYA-R 117
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ N+ + I+ +++ P E + LPG+GR A +LS P +D ++ R+
Sbjct: 118 ARNLHKAAQIMRDQYGGMFPTEFEQVWALPGVGRSTAGAVLSSCLNAPYPILDGNVKRVL 177
Query: 165 NRIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+R G K E L ++ P + + + ++ G VC KP+C C +
Sbjct: 178 SRYFAIDGWPGEKKTEDRLWQLTAQVTPTEQVADFNQAMMDLGAMVCTRTKPKCDLCPLK 237
Query: 220 NLCKR 224
C+
Sbjct: 238 KDCRA 242
>gi|322513253|ref|ZP_08066377.1| A/G-specific adenine glycosylase [Actinobacillus ureae ATCC 25976]
gi|322120960|gb|EFX92807.1| A/G-specific adenine glycosylase [Actinobacillus ureae ATCC 25976]
Length = 381
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 81/198 (40%), Gaps = 7/198 (3%)
Query: 35 KWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
++ + + ++ ++ Q+ V V + E + ++ +
Sbjct: 28 QYGRKHLPWQQNKTLYGVWLSEVMLQQTQVVTVIPYFERFIERFPMVTDLADAHIDEVLH 87
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+G Y ++ N+ + + ++F + P + + L G+GR A ILS P
Sbjct: 88 LWTGLGYYA-RARNLHKAAQQIRDQFGGEFPTDFDDVLALSGVGRSTAGAILSSVLNAPY 146
Query: 154 IGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLHGRYVCKA 208
+D ++ R+ +R+ G + K +E L ++ P + + + ++ G VC
Sbjct: 147 PILDGNVKRVLSRVFAVDGWSGEKSIENKLWQLTASVTPNRQVADFNQAMMDLGAMVCTR 206
Query: 209 RKPQCQSCIISNLCKRIK 226
KP+C C + NLC+ +
Sbjct: 207 SKPKCSLCPLVNLCEANR 224
>gi|329895784|ref|ZP_08271160.1| A/G-specific adenine glycosylase [gamma proteobacterium IMCC3088]
gi|328922146|gb|EGG29503.1| A/G-specific adenine glycosylase [gamma proteobacterium IMCC3088]
Length = 349
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 6/208 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + F V + + V+ ++ Q+ V + T + +
Sbjct: 11 ADRVLAWFEDHGRKHLPWQQNVTPYKVWVSEIMLQQTQVATVIPYFERFMASFPTIESLS 70
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++ +G Y ++ N+ + + +P+T+EGL LPGIGR A I
Sbjct: 71 CSPLDDVLSHWTGLGYYA-RARNLHKAAQQVCQHHGGVLPKTIEGLESLPGIGRSTAGAI 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLL----RIIPPKHQYNAHYWLV 199
+S+A +D ++ R+ R PG K+ +L R P + + ++
Sbjct: 130 VSLALNHRATILDGNVKRVLARHQAVPGWPGETKIHNALWDIADRFTPANNCKAYNQAMM 189
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C P C C +S C +K+
Sbjct: 190 DLGATICTRSSPSCLLCPVSADCIALKE 217
>gi|225620166|ref|YP_002721423.1| endonuclease III [Brachyspira hyodysenteriae WA1]
gi|225214985|gb|ACN83719.1| endonuclease III [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGE-------LYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
++ I + L + + ++++ +LS ++ D A+
Sbjct: 1 MNDNDIHPIMKELTKVTKEMPMPVVTEIKLLTNRDAYKILISTMLSLRTKDPTTRDASMR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LFE A P+ ML + E+++ I +G Y+ K++NI+ +S ++I++F ++P ++ L +
Sbjct: 61 LFEKAGNPKDMLKLSEEEIAKLIYPVGFYKVKAKNILEVSQMIIDDFKGQVPDEIDELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN++++ AF I VDTH+ RISNR G KTP + E +L +P ++
Sbjct: 121 LKGVGRKVANLVVTEAFDKDGICVDTHVHRISNRFGYVNTKTPEETEFALRDKLPKEYWR 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ LV++G+ +CK P C C +S C K
Sbjct: 181 VYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFK 214
>gi|215447923|ref|ZP_03434675.1| adenine glycosylase mutY [Mycobacterium tuberculosis T85]
Length = 310
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 140 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 200 ATVCTARTPRCGLCPL-DWC 218
>gi|150025715|ref|YP_001296541.1| A/G-specific adenine glycosylase [Flavobacterium psychrophilum
JIP02/86]
gi|149772256|emb|CAL43732.1| A/G-specific adenine glycosylase [Flavobacterium psychrophilum
JIP02/86]
Length = 343
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 9/204 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + N + + ++ ++ Q+ K E T +
Sbjct: 5 EKIIAWYLENKRDLPWRKTSNPYAIWLSEIMLQQTRVAQGLPYYKAFTEKFPTVFDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ + +G Y ++ N+ + + + N+ + P + L +L G+G A I S
Sbjct: 65 TEEQVLKLWQGLGYYS-RARNLHATAKFIANDLNGIFPSDYKNLLKLKGVGEYTAAAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ VD ++FR+ +R +A GK + +I + + ++
Sbjct: 124 FSYNEVVPVVDGNVFRVLSRYYNVATDIASGKAKKEFTLLAQELISKDNPALFNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C ++ C +
Sbjct: 184 GALQCVPKNPNCYFCPLNTSCAAL 207
>gi|15610725|ref|NP_218106.1| adenine glycosylase MutY [Mycobacterium tuberculosis H37Rv]
gi|15843202|ref|NP_338239.1| A/G-specific adenine glycosylase, putative [Mycobacterium
tuberculosis CDC1551]
gi|31794766|ref|NP_857259.1| putative adenine glycosylase [Mycobacterium bovis AF2122/97]
gi|121639509|ref|YP_979733.1| putative adenine glycosylase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663453|ref|YP_001284976.1| putative A/G-specific adenine glycosylase [Mycobacterium
tuberculosis H37Ra]
gi|148824794|ref|YP_001289549.1| adenine glycosylase mutY [Mycobacterium tuberculosis F11]
gi|215405637|ref|ZP_03417818.1| adenine glycosylase mutY [Mycobacterium tuberculosis 02_1987]
gi|215429090|ref|ZP_03427009.1| adenine glycosylase mutY [Mycobacterium tuberculosis T92]
gi|215432562|ref|ZP_03430481.1| adenine glycosylase mutY [Mycobacterium tuberculosis EAS054]
gi|218755372|ref|ZP_03534168.1| adenine glycosylase mutY [Mycobacterium tuberculosis GM 1503]
gi|219559666|ref|ZP_03538742.1| adenine glycosylase mutY [Mycobacterium tuberculosis T17]
gi|224992006|ref|YP_002646695.1| putative adenine glycosylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800630|ref|YP_003033631.1| adenine glycosylase mutY [Mycobacterium tuberculosis KZN 1435]
gi|254234161|ref|ZP_04927485.1| adenine glycosylase mutY [Mycobacterium tuberculosis C]
gi|254366150|ref|ZP_04982194.1| adenine glycosylase mutY [Mycobacterium tuberculosis str. Haarlem]
gi|254552698|ref|ZP_05143145.1| adenine glycosylase mutY [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184506|ref|ZP_05761980.1| adenine glycosylase mutY [Mycobacterium tuberculosis CPHL_A]
gi|289445182|ref|ZP_06434926.1| adenine glycosylase mutY [Mycobacterium tuberculosis CPHL_A]
gi|289555852|ref|ZP_06445062.1| adenine glycosylase mutY [Mycobacterium tuberculosis KZN 605]
gi|289571830|ref|ZP_06452057.1| adenine glycosylase mutY [Mycobacterium tuberculosis T17]
gi|289747425|ref|ZP_06506803.1| adenine glycosylase mutY [Mycobacterium tuberculosis 02_1987]
gi|289752303|ref|ZP_06511681.1| adenine glycosylase mutY [Mycobacterium tuberculosis T92]
gi|289763767|ref|ZP_06523145.1| adenine glycosylase mutY [Mycobacterium tuberculosis GM 1503]
gi|294993709|ref|ZP_06799400.1| adenine glycosylase MutY [Mycobacterium tuberculosis 210]
gi|297636264|ref|ZP_06954044.1| adenine glycosylase MutY [Mycobacterium tuberculosis KZN 4207]
gi|297733257|ref|ZP_06962375.1| adenine glycosylase MutY [Mycobacterium tuberculosis KZN R506]
gi|306791184|ref|ZP_07429486.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu005]
gi|306795969|ref|ZP_07434271.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu006]
gi|306969721|ref|ZP_07482382.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu009]
gi|307081770|ref|ZP_07490940.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu011]
gi|307086386|ref|ZP_07495499.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu012]
gi|313660587|ref|ZP_07817467.1| adenine glycosylase MutY [Mycobacterium tuberculosis KZN V2475]
gi|2950412|emb|CAA17858.1| PROBABLE ADENINE GLYCOSYLASE MUTY [Mycobacterium tuberculosis
H37Rv]
gi|13883556|gb|AAK48053.1| A/G-specific adenine glycosylase, putative [Mycobacterium
tuberculosis CDC1551]
gi|31620363|emb|CAD95806.1| PUTATIVE ADENINE GLYCOSYLASE [Mycobacterium bovis AF2122/97]
gi|121495157|emb|CAL73643.1| Putative adenine glycosylase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124603829|gb|EAY61792.1| adenine glycosylase mutY [Mycobacterium tuberculosis C]
gi|134151662|gb|EBA43707.1| adenine glycosylase mutY [Mycobacterium tuberculosis str. Haarlem]
gi|148507605|gb|ABQ75414.1| putative A/G-specific adenine glycosylase [Mycobacterium
tuberculosis H37Ra]
gi|148723321|gb|ABR07946.1| adenine glycosylase mutY [Mycobacterium tuberculosis F11]
gi|224775121|dbj|BAH27927.1| putative adenine glycosylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253322132|gb|ACT26735.1| adenine glycosylase mutY [Mycobacterium tuberculosis KZN 1435]
gi|289418140|gb|EFD15341.1| adenine glycosylase mutY [Mycobacterium tuberculosis CPHL_A]
gi|289440484|gb|EFD22977.1| adenine glycosylase mutY [Mycobacterium tuberculosis KZN 605]
gi|289545584|gb|EFD49232.1| adenine glycosylase mutY [Mycobacterium tuberculosis T17]
gi|289687953|gb|EFD55441.1| adenine glycosylase mutY [Mycobacterium tuberculosis 02_1987]
gi|289692890|gb|EFD60319.1| adenine glycosylase mutY [Mycobacterium tuberculosis T92]
gi|289711273|gb|EFD75289.1| adenine glycosylase mutY [Mycobacterium tuberculosis GM 1503]
gi|308340297|gb|EFP29148.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu005]
gi|308343636|gb|EFP32487.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu006]
gi|308352813|gb|EFP41664.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu009]
gi|308360618|gb|EFP49469.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu011]
gi|308364206|gb|EFP53057.1| adenine glycosylase mutY [Mycobacterium tuberculosis SUMu012]
gi|326905428|gb|EGE52361.1| adenine glycosylase mutY [Mycobacterium tuberculosis W-148]
gi|328460360|gb|AEB05783.1| adenine glycosylase mutY [Mycobacterium tuberculosis KZN 4207]
Length = 304
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P + L+ G
Sbjct: 140 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 200 ATVCTARTPRCGLCPL-DWC 218
>gi|306836893|ref|ZP_07469848.1| A/G-specific adenine glycosylase [Corynebacterium accolens ATCC
49726]
gi|304567234|gb|EFM42844.1| A/G-specific adenine glycosylase [Corynebacterium accolens ATCC
49726]
Length = 284
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 13/198 (6%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++++ ++S Q+ V + TP
Sbjct: 6 LLSWFDANERDLPWRRPGTSAWGVLLSEVMSQQTPVARVAPVWEEWMRRWPTPADFAQAS 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G R+ +++P ++ L LPGIG A +
Sbjct: 66 RAEVLRAWGKLGYPRRALRL------WECAGVMDEVPSDVDELLALPGIGDYTARAVACF 119
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVE-QSLLRIIPPKHQYNAHYWLVLHGRY 204
FG VDT++ R+ R P+K E ++ ++P ++ L+ G
Sbjct: 120 HFGQNVPVVDTNVRRVYARAEDGNFLAPPPSKRELAAVAALLPERNGPRFSAALMELGAL 179
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ P C+ C + C
Sbjct: 180 VCTAKNPDCKRCPLRATC 197
>gi|261377725|ref|ZP_05982298.1| A/G-specific adenine glycosylase [Neisseria cinerea ATCC 14685]
gi|269146007|gb|EEZ72425.1| A/G-specific adenine glycosylase [Neisseria cinerea ATCC 14685]
Length = 353
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + ++ N + + ++ ++ Q+ V E
Sbjct: 1 MNTPTPFSERLIRWQKQYGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAARQVVEQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + AF +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|315122065|ref|YP_004062554.1| A/G-specific adenine glycosylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495467|gb|ADR52066.1| A/G-specific adenine glycosylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 355
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 29 FYLFSLKWPSPKGELYYV-----------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + L + + +T+ ++ ++ Q+T V K +
Sbjct: 10 IDIL-NWYDINHRTLPWRIPPKTNKSSLPDPYTIWLSEIMLQQTTVTTVEPYFKKFMQKW 68
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + E+++ + +G Y ++ N+ + +++ +++ P + L +LPGIG
Sbjct: 69 PTIFCLSSATEEEILSAWAGLGYYT-RARNLKKCADVIVQKYEGDFPNKEDILKKLPGIG 127
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNA 194
A+ I+++AF + +DT+I RI +R P ++ I +
Sbjct: 128 DYTASAIVAIAFNHFAVVIDTNIERIISRCFAITKSLPLYKKTIKSYARTITSASRPGDF 187
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C A+KP C C I C +
Sbjct: 188 VQAMMDLGALICTAKKPLCHLCPIQKKCLTFSR 220
>gi|262042612|ref|ZP_06015768.1| A/G-specific adenine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040046|gb|EEW41161.1| A/G-specific adenine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 352
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVATLHGGEFPRTFDEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C+ C +SN
Sbjct: 149 RCYAVSGWPGKKEVEKRLWDISEEVTPAEGVERFNQAMMDLGAMVCTRSKPKCELCPLSN 208
Query: 221 LCKRI 225
C
Sbjct: 209 GCVAY 213
>gi|167763390|ref|ZP_02435517.1| hypothetical protein BACSTE_01764 [Bacteroides stercoris ATCC
43183]
gi|167698684|gb|EDS15263.1| hypothetical protein BACSTE_01764 [Bacteroides stercoris ATCC
43183]
Length = 350
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + K +L + + + + ++ ++ Q+ V + +
Sbjct: 5 MNRLTEALLDWYADNKRDLPWRGTTDPYRIWISEIILQQTRVVQGYEYFLRFIRRFPDVR 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + E ++ Y + +G Y + + + K P++ + + L G+G A
Sbjct: 65 TLASASEDEVLKYWQGLGYYSRARNLHAAAKS-----MNGKFPESYQEVRALKGVGDYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S+A+ +P VD +++R+ +R + + ++ +
Sbjct: 120 AAICSIAYNMPYAVVDGNVYRVLSRYCGIDVPIDSTEGKKLFAALADEMLDKSRPAAYNQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 180 AIMDFGAIQCTPQSPNCMFCPLADSCSALSK 210
>gi|224541756|ref|ZP_03682295.1| hypothetical protein CATMIT_00928 [Catenibacterium mitsuokai DSM
15897]
gi|224525360|gb|EEF94465.1| hypothetical protein CATMIT_00928 [Catenibacterium mitsuokai DSM
15897]
Length = 333
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 13/206 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + K L + + + + V+ ++ Q+T V E + +
Sbjct: 3 IQEELINWYKENKRVLPFRDIDDPYKIWVSEIMLQQTTVTAVIPYYNRFIERFPDVKTLS 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++ Y +G YR+ S +N P+ E + L G+G A+ I
Sbjct: 63 DASIEEVYKYWEGLGYYRRALHLHKSA-----QMIENHFPKDYEDILSLVGVGPYTASAI 117
Query: 145 LSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
+S A+ P I VD + R+ +R+ +A KT K+ + +++ + ++
Sbjct: 118 MSFAYHKPYIAVDGNALRVLSRLYAIEDNIASNKTVKKITEIGNKLVVGYDSAQINQGIM 177
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
+C P C+ C + + C+
Sbjct: 178 DFANAICLPVHPHCEECPLQSHCQAY 203
>gi|332976791|gb|EGK13621.1| A/G-specific adenine glycosylase [Psychrobacter sp. 1501(2011)]
Length = 398
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 77/216 (35%), Gaps = 14/216 (6%)
Query: 21 TPKELEEIFYLFSLKWPS-PKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKH 72
T EL+ + + +L + N + + ++ ++ Q+ V K
Sbjct: 8 TDAELDSFAPRILNWFDDYGRHDLPWQQHKTDTPNPYIVWLSEVMLQQTQVTTVVPYFKR 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLT 131
T Q + + + +G Y + ++ PQT+EG
Sbjct: 68 FMTSFPTVQDLAHAEWDTVAEHWAGLGYYARARNLHKGAKQLVEIIEKTGNFPQTVEGWE 127
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRII 186
+ G+G+ A I++M + D ++ R+ N + T ++ R+
Sbjct: 128 AISGVGQSTAGAIVAMGLHGYGVICDGNVKRVITRWAGNEGDITKSATTKELWALAERLT 187
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P K + ++ G +C R P C+ C IS+ C
Sbjct: 188 PIKDSGHFAQAMMDIGATLCTRRNPNCEQCPISDDC 223
>gi|262376822|ref|ZP_06070049.1| A/G-specific adenine glycosylase [Acinetobacter lwoffii SH145]
gi|262308167|gb|EEY89303.1| A/G-specific adenine glycosylase [Acinetobacter lwoffii SH145]
Length = 344
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + V+ ++ Q+ V + + + T Q +
Sbjct: 8 DALLEWFDVHGRHDLPWQVTDAPYKVWVSEIMLQQTQVKTVLQYFERFIQRFPTVQDLGQ 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y +G Y + + + + PQ+LE LPGIGR A ++
Sbjct: 68 ASWDEVAPYWAGLGYYARARNLHKAAGIVTAQQQF---PQSLEEWMALPGIGRSTAGALM 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ + +D ++ R+ +R L+ + Q ++ P + ++ ++
Sbjct: 125 SLGLRQYGVIMDGNVKRVLSRFFAIEDDLSKPVHERALWQLAEQLCPIERNHDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC +KP C C + CK +Q
Sbjct: 185 LGATVCTPKKPLCLYCPMQQHCKAHQQ 211
>gi|257464774|ref|ZP_05629145.1| A/G-specific adenine glycosylase [Actinobacillus minor 202]
gi|257450434|gb|EEV24477.1| A/G-specific adenine glycosylase [Actinobacillus minor 202]
Length = 378
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 7/197 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + + ++ ++ Q+ V V + + T + ++
Sbjct: 28 QQYGRKHLPWQQNKSLYGVWLSEVMLQQTQVVTVIPYFERFMQRFPTVVDLANASIDEVL 87
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + + +EF + P + + L G+GR A ILS P
Sbjct: 88 HLWTGLGYYA-RARNLHKAAQQIRDEFGGEFPTSFADVLVLSGVGRSTAGAILSSVLNAP 146
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ +R G K +E L + P + + ++ G +C
Sbjct: 147 HPILDGNVKRVLSRYFAVEGWAGEKPIENRLWALTEAVTPTSQVADFNQAMMDLGAMICT 206
Query: 208 ARKPQCQSCIISNLCKR 224
KP+C C + C+
Sbjct: 207 RSKPKCSLCPLEKNCQA 223
>gi|293390929|ref|ZP_06635263.1| A/G-specific adenine glycosylase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951463|gb|EFE01582.1| A/G-specific adenine glycosylase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 419
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 73 KTLYGVWLSEVMLQQTQVTTVIPYFERFVKTFPNLTALANAPLDEVLHLWTGLGYYA-RA 131
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ ++ + P E + LPG+GR A +LS P +D ++ R+ +
Sbjct: 132 RNLHKAAQIMRDQHGGEFPIEFEQVWALPGVGRSTAGAVLSSCLNAPYPILDGNVKRVLS 191
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K E L R+ P + + + ++ G VC KP+C+ C + +
Sbjct: 192 RYFAVSGWPGEKKTEDHLWRLTAQVTPTEQVADFNQAMMDIGAMVCTRSKPKCELCPLKS 251
Query: 221 LCKR 224
CK
Sbjct: 252 DCKA 255
>gi|298481898|ref|ZP_07000088.1| A/G-specific adenine glycosylase [Bacteroides sp. D22]
gi|295087865|emb|CBK69388.1| A/G-specific DNA-adenine glycosylase [Bacteroides xylanisolvens
XB1A]
gi|298272120|gb|EFI13691.1| A/G-specific adenine glycosylase [Bacteroides sp. D22]
Length = 346
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + +
Sbjct: 1 MNEFTKTIVEWYKENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVR 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAAEEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPETYPEVLALKGVGEYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C + C + +
Sbjct: 176 GIMDFGAIQCTPQSPDCLFCPLVGSCSALSK 206
>gi|83945339|ref|ZP_00957687.1| hypothetical protein OA2633_14171 [Oceanicaulis alexandrii
HTCC2633]
gi|83851173|gb|EAP89030.1| hypothetical protein OA2633_14171 [Oceanicaulis alexandrii
HTCC2633]
Length = 324
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+T + + E T + + + +G Y ++
Sbjct: 6 DPYAIWLSEIMLQQTTVPHATPYWERFLERWPTVAHLADAPREDVLAAWAGLGYYA-RAR 64
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + + +E P LEGL LPG+G AN I + AF +P VD ++ R+ R
Sbjct: 65 NLHACAQKVAHELAGAFPSDLEGLLALPGVGDYTANAIRAAAFDLPASVVDGNVERVITR 124
Query: 167 IGLAPGKTPN---KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P +++ + + + ++ G VC + P C +C S+ C
Sbjct: 125 MVRLETPLPKAKPQIKAIAADLASTERPGDYAQAIMDLGATVCTPKSPDCAACPWSDWC 183
>gi|226304159|ref|YP_002764117.1| adenine glycosylase [Rhodococcus erythropolis PR4]
gi|226183274|dbj|BAH31378.1| putative adenine glycosylase [Rhodococcus erythropolis PR4]
Length = 297
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 11/197 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++++ ++ Q+ V V + E P M A
Sbjct: 12 LLKWYSETARDLPWRREGVSAWQILMSEIMLQQTPVVRVAPIWEEWVERWPVPSAMAASS 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G R+ + + +L E + +P+ ++ L LPGIG A +
Sbjct: 72 QAEVLRAWGKLGYPRRALR-LHECAGVLAAEHGDVVPEDVDTLLSLPGIGSYTARAVACF 130
Query: 148 AFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPPKHQYN--AHYWLVLH 201
A+G VDT++ R+ R G A P+ + ++P L+
Sbjct: 131 AYGQRVPVVDTNVRRVVARAVHGNAEPGNPSNTRDLADVAALLPRTRARAATYSAALMEL 190
Query: 202 GRYVCKARKPQCQSCII 218
G +C AR P C++C +
Sbjct: 191 GALICTARTPNCENCPL 207
>gi|212212615|ref|YP_002303551.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii CbuG_Q212]
gi|212011025|gb|ACJ18406.1| A/G-specific adenine DNA glycosylase [Coxiella burnetii CbuG_Q212]
Length = 354
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 84/214 (39%), Gaps = 8/214 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + + + F ++ + + V+ ++ Q+ V + +
Sbjct: 1 MDSKQFAQGVLHWF-DRYGRHDLPWQKKLTPYRVWVSEIMLQQTQVSTVIPYFERFIKRF 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + ++ + +G Y ++ N+ + I+ + + P T+E L+ LPGIG
Sbjct: 60 PTVGALALAPLDEILAHWSGLGYYA-RARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIG 118
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQY 192
R A +LS+ + +D ++ R+ R +V + P +
Sbjct: 119 RSTAGAVLSLGMHQYAVILDGNVKRVLARYNALDVPINQQVGINILWNLAEKYTPKNRCW 178
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G +C KP+C C + + CK +
Sbjct: 179 DYNQAMMDIGAMICTRTKPKCSLCPLKSSCKAHR 212
>gi|258422945|ref|ZP_05685844.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9635]
gi|257846732|gb|EEV70747.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9635]
Length = 345
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGIVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|160886221|ref|ZP_02067224.1| hypothetical protein BACOVA_04228 [Bacteroides ovatus ATCC 8483]
gi|156108106|gb|EDO09851.1| hypothetical protein BACOVA_04228 [Bacteroides ovatus ATCC 8483]
Length = 349
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + Q
Sbjct: 1 MNEFTKTIVEWYEENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQ 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGEYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSPNCLFCPLAGGCSALSK 206
>gi|38234544|ref|NP_940311.1| putative DNA repair protein [Corynebacterium diphtheriae NCTC
13129]
gi|38200807|emb|CAE50511.1| Putative DNA repair protein [Corynebacterium diphtheriae]
Length = 295
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 9/213 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFE 75
+E I + + + + + + ++++ ++S Q+ V
Sbjct: 1 MNANNVENIPQILTEWYRKNARSIVWRTPQTSAWGVLLSEVMSQQTPVARVEPIWVDWMR 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP G+ ++ +G R+ + + ++ ++P +E L LPG
Sbjct: 61 RWPTPADFAQAGKDEVLRAWDRLGYPRRALR-LHECAQQIVQRHGGEVPHDVEQLLALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIG---LAPGKTPNKVEQSLLRIIPPKHQY 192
IG A + + AFG VDT++ R+ +R+ G + + + ++P +
Sbjct: 120 IGDYTARAVAAFAFGQRVAVVDTNVRRVHHRVYQGIYLAGNASKRELREVEALLPHDNAP 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G VC+ PQC C ++ C+ I
Sbjct: 180 EFSVALMELGALVCQ-TSPQCDRCPLTQQCRWI 211
>gi|327401491|ref|YP_004342330.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
gi|327316999|gb|AEA47615.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
Length = 211
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 100/179 (55%), Gaps = 2/179 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
F +V +LS+++ D K K LFE P+ + + ++++ IR +G YR K+
Sbjct: 29 KTPFQHLVFAVLSSRTRDEQTAKVAKKLFERVKKPEDLATMPVEEIERLIRGVGFYRVKA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ L+ +L+ +P T + L +LPG+GRK ANV+L+ AFG IGVDTH+ R+SN
Sbjct: 89 RKLKELAKVLVEMGS--VPDTYDELVKLPGVGRKTANVVLASAFGKAAIGVDTHVHRVSN 146
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
R+GL K P + E L +IIP + + +V G+ VC+ KP C C ++ C +
Sbjct: 147 RMGLVRTKKPEETENELKKIIPRELWTRVNRAMVGFGQTVCRPLKPLCDECPFTDWCPK 205
>gi|224532011|ref|ZP_03672643.1| endonuclease III [Borrelia valaisiana VS116]
gi|224511476|gb|EEF81882.1| endonuclease III [Borrelia valaisiana VS116]
Length = 211
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYGNFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGAIYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + HGR +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLENSPIKIELDLKRRIEPCKQYRFSMAINKHGREICTSRNVSCV 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|148657295|ref|YP_001277500.1| HhH-GPD family protein [Roseiflexus sp. RS-1]
gi|148569405|gb|ABQ91550.1| HhH-GPD family protein [Roseiflexus sp. RS-1]
Length = 318
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 71/201 (35%), Gaps = 6/201 (2%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +L + + + ++VA ++ Q+ V + T Q +
Sbjct: 19 RFHQALMNWFSEAARDLPWRRTRDPYRIMVAEVMLQQTQVDRVLPKYEAFLTCFPTLQAL 78
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ +G R+ N+ + ++ FD P+ + L LPGIG A
Sbjct: 79 ADAPTAEVIRLWSGLGYNRRAV-NLQRAAREIVERFDGVFPRDVAVLLTLPGIGPYTAGA 137
Query: 144 ILSMAFGIPTIGVDTHIFRIS--NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
I AF +DT+I R+ A + +P + + L+
Sbjct: 138 IACFAFEQDVAFMDTNIRRVIRRALTDPAATVNERDLLALAQAALPTGRSWMWNQALMEL 197
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C A P C C + +LC
Sbjct: 198 GSLICTADSPACWRCPLRDLC 218
>gi|218887011|ref|YP_002436332.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|97975352|dbj|BAE94414.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris]
gi|218757965|gb|ACL08864.1| A/G-specific adenine glycosylase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 434
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K L + +++ ++ ++ Q+ + A E
Sbjct: 77 LLDWFAVHKRPLPWRFGYEPYSVWISEVMLQQTQMDRGVDYFLRWMTQFPDVASVAAASE 136
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+L +G Y + N+ + L+ ++P E + LPGIG A I +A
Sbjct: 137 DELLKAWEGLGYYS-RVRNLHKAAKALVERHGGELPDDPEAIRALPGIGPYTAGAIAGIA 195
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F +D ++ R+ +R+ ++ ++P + + L+ G
Sbjct: 196 FNRDVTCIDANVDRVFSRVFDIDTPVRARPAAARIRALATALLPAGRARDFNQALMELGA 255
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC+ +KPQC SC +S LC+ ++
Sbjct: 256 LVCR-KKPQCASCPLSGLCESLR 277
>gi|302530747|ref|ZP_07283089.1| A/G-specific adenine glycosylase [Streptomyces sp. AA4]
gi|302439642|gb|EFL11458.1| A/G-specific adenine glycosylase [Streptomyces sp. AA4]
Length = 291
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + ++V+ ++ Q+ V P + A
Sbjct: 6 DVLIEWFADVGRDLPWREPDCSAWGVLVSEIMLQQTPVSRVQPIWLEWMARWPVPSALAA 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + I D +P ++ L LPGIG A +
Sbjct: 66 ETTGEVVRAWGKLGYPRRALRLHAAATVIAQEHGDV-VPSDVDTLLALPGIGAYTARAVA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKHQ--YNAHYWLV 199
+ A+G VDT++ R+ R A + + + ++P + L+
Sbjct: 125 AFAYGKRAPVVDTNVRRVVARAVHGAGDAGPASNTRDMADVEALLPAEDAPAAKLSAALM 184
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C AR P+C C I C
Sbjct: 185 ELGALICTARSPKCADCPIYAEC 207
>gi|163753442|ref|ZP_02160566.1| A/G-specific adenine glycosylase [Kordia algicida OT-1]
gi|161327174|gb|EDP98499.1| A/G-specific adenine glycosylase [Kordia algicida OT-1]
Length = 345
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 80/205 (39%), Gaps = 9/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ + E T +
Sbjct: 5 KEIIQWYFQNKRDLPWRKTKDPYRIWLSEIMLQQTRVAQGLPYYEKFTEAFPTVYDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y ++ N+ + ++ ++ + P T + L +L G+G A+ I S
Sbjct: 65 EESQVLKLWQGLGYYS-RARNLHYTAKDIVENYNGQFPSTYKALLKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ F VD +++R+ +R K ++ ++ N + ++
Sbjct: 124 ICFDEVAPVVDGNVYRVLSRYFDIDTPINSTEGIKKFKELAFEVVDHDDPANFNQAIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G CK + P C C + C+ +K
Sbjct: 184 GAVQCKPQNPYCIICPLHESCEGLK 208
>gi|111115575|ref|YP_710193.1| endonuclease III [Borrelia afzelii PKo]
gi|110890849|gb|ABH02017.1| endonuclease III [Borrelia afzelii PKo]
Length = 214
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + ++
Sbjct: 23 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYGNFESLSRANVRDVEKL 82
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NII+ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 83 IYKTGFYSRKAKNIINCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 142
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + HGR +C +R C
Sbjct: 143 IVDTHFSRVITRHALSLENSPIKIELDLKRRIKPCKQYRFSMAINKHGREICTSRNVSCV 202
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 203 NCFLEKFAPRV 213
>gi|296106480|ref|YP_003618180.1| A/G-specific adenine glycosylase [Legionella pneumophila 2300/99
Alcoy]
gi|295648381|gb|ADG24228.1| A/G-specific adenine glycosylase [Legionella pneumophila 2300/99
Alcoy]
Length = 355
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + + V+ ++ Q+ V E +
Sbjct: 12 QLLLDWYDLHGRKDLPWQLPRSPYRVWVSEIMLQQTQVQTVIPYFNRFIEHFPDIFLLAN 71
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ + +G Y ++ N+ + + I+ ++++ P+ L L +LPGIG A IL
Sbjct: 72 AEEDEVLSLWSGLGYYS-RARNLHNTAKIISDQYNGVFPEDLNILVQLPGIGPSTAAAIL 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVL 200
S AF P +D ++ R+ +R L G +V++ L + +P + + ++
Sbjct: 131 SQAFNKPAAILDGNVKRVLSRFFLIEGWPEQAQVKKKLWGLASSCMPNERCADYTQAIMD 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C + N C
Sbjct: 191 LGATCCTNKNPHCLRCPVKNHCLAF 215
>gi|332654550|ref|ZP_08420293.1| A/G-specific adenine glycosylase [Ruminococcaceae bacterium D16]
gi|332516514|gb|EGJ46120.1| A/G-specific adenine glycosylase [Ruminococcaceae bacterium D16]
Length = 348
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
L + L + + + V+ ++ Q+ V + + A T Q + A+ E
Sbjct: 11 LLLWYREHARVLPWRQDPTPYRVWVSEIMLQQTRVAAVLNYYRRFLQAAPTVQDLAALPE 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
L + +G Y ++ N+ + ++ ++ P T EG+ L G+G A I S+A
Sbjct: 71 DALMKLWQGLGYYS-RARNLQKAARQIVEDWGGVFPNTYEGIRSLAGVGDYTAGAIASIA 129
Query: 149 FGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FGIP VD ++ R+ R + T ++ +L ++IP + ++ G
Sbjct: 130 FGIPVPAVDGNVLRVVTRLTADPSDILAASTKKRITAALQQVIPTAQPGQFNQAMMELGA 189
Query: 204 YVCKAR-KPQCQSCIISNLCKRIKQ 227
VC P C+ C ++ C+ +Q
Sbjct: 190 TVCLPNGAPLCEKCPAADFCQAFQQ 214
>gi|291515983|emb|CBK65193.1| A/G-specific DNA-adenine glycosylase [Alistipes shahii WAL 8301]
Length = 354
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 80/206 (38%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ I + + +L + + + + ++ ++ Q+ + E
Sbjct: 1 MNRIAEILLDWYAREGRDLPWRRTRDPYRIWLSEVILQQTRVAQGMEYYLRFTERFPDVA 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ + +G Y + + + ++ F P++L+ + L G+G A
Sbjct: 61 SLAAAPEDEVLKLWQGLGYYSRARNL-RAAAREVVERFGGVFPRSLDDVRSLRGVGDYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+ P VD +++R+ +R LA +++ + + H +
Sbjct: 120 AAICSAAYDAPCAVVDGNVYRVLSRLFDLAEPIDTTAGKRAFACLAQSQLDAAHPGRYNQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P+C++C +S C
Sbjct: 180 AIMDFGAIQCTPASPRCEACPLSESC 205
>gi|189466526|ref|ZP_03015311.1| hypothetical protein BACINT_02901 [Bacteroides intestinalis DSM
17393]
gi|189434790|gb|EDV03775.1| hypothetical protein BACINT_02901 [Bacteroides intestinalis DSM
17393]
Length = 346
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K EL + + + + ++ ++ Q+ V +
Sbjct: 6 EKLIVWYAGNKRELPWRDTTDPYIIWISEIILQQTRVVQGYDYFLRFIHRFPDVTALAEA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y + + + P T EG+ L G+G A I S
Sbjct: 66 SEDEVMKCWQGLGYYSRARNLHAAAKS-----MNGVFPTTYEGVRALKGVGDYTAAAICS 120
Query: 147 MAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R + + ++ + + + ++
Sbjct: 121 FAYGMPYAVVDGNVYRVLSRYFGIDTPVDSTEGKKLFAALADEMMDKSQPAVYNQAIMDF 180
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C +++ C +K+
Sbjct: 181 GAIQCTPQSPNCLFCPLADSCSALKE 206
>gi|150392011|ref|YP_001322060.1| A/G-specific adenine glycosylase [Alkaliphilus metalliredigens
QYMF]
gi|149951873|gb|ABR50401.1| A/G-specific adenine glycosylase [Alkaliphilus metalliredigens
QYMF]
Length = 352
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K + + + + + V+ ++ Q+ V ++ + T + + +
Sbjct: 10 LIEWFREEKRWMPWRETKDPYCIWVSEIMLQQTRVETVISYYQNFMKKFPTIETLARASQ 69
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++ +G Y + N+ ++ ++ + +P+ + L +LPGIG A ILS+A
Sbjct: 70 EEVLKSWEGLGYYS-RGRNLHRAANEIVLIHEGNVPKDKKILLKLPGIGPYTAGAILSIA 128
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ VD ++ R+ +R+ K V + +++P + + L+ G
Sbjct: 129 YNQKEPAVDGNVLRVMSRLFNIQEDIMEKKVVNEVTDLVFQLMPQDNGGDFTEALMELGA 188
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VC +KP+C+ C + N CK
Sbjct: 189 TVCVPQKPRCRLCPVHNQCKA 209
>gi|261379798|ref|ZP_05984371.1| A/G-specific adenine glycosylase [Neisseria subflava NJ9703]
gi|284797483|gb|EFC52830.1| A/G-specific adenine glycosylase [Neisseria subflava NJ9703]
Length = 344
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + ++ N + + ++ ++ Q+ V E
Sbjct: 1 MNTPISFSERLIRWQKQYGRHHLPWLVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + +I +F P + L L G+GR
Sbjct: 61 TVQALAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVIEQFRGIFPAERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K + ++P ++
Sbjct: 120 STAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWSLAESLLPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|156742868|ref|YP_001432997.1| HhH-GPD family protein [Roseiflexus castenholzii DSM 13941]
gi|156234196|gb|ABU58979.1| HhH-GPD family protein [Roseiflexus castenholzii DSM 13941]
Length = 317
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 76/206 (36%), Gaps = 6/206 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L ++ + +L + + + ++VA ++ Q+ V E T
Sbjct: 17 LNDLHQALLKWFSEAARDLPWRRTRDPYRILVAEVMLQQTQVDRVLPKYAAFLERFPTLH 76
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ +G R+ N+ + + + P+ + L LPGIG A
Sbjct: 77 TLAEAPTAEVIRMWAGLGYNRRAV-NLQRAARAICARYGGVFPRDVATLVTLPGIGSYTA 135
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--PPKHQYNAHYWLV 199
+ AF +DT+I R+ R+ P +T N+ L P + + L+
Sbjct: 136 GAVACFAFEQDVAFMDTNIRRVIRRVFTDPTETVNERALLALARAALPVGRSWMWNQALM 195
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G VC A P C C + + C+
Sbjct: 196 ELGSLVCTADAPACWRCPLRDQCRDY 221
>gi|153947319|ref|YP_001399803.1| adenine DNA glycosylase [Yersinia pseudotuberculosis IP 31758]
gi|152958814|gb|ABS46275.1| A/G-specific adenine glycosylase [Yersinia pseudotuberculosis IP
31758]
Length = 371
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + Q + A ++ + +G Y ++
Sbjct: 28 KTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPDIQALAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P T + + LPGIGR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQMVVEHHQGEFPTTFDQILALPGIGRSTAGAILSLSLGQHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K + Q + P + ++ G VC KP+C+ C ++
Sbjct: 147 RCYAVDGWPGKKEVEGRLWQISEDVTPANGVGQFNQAMMDLGAMVCTRSKPKCELCPLNI 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCMAY 211
>gi|300859185|ref|YP_003784168.1| A/G-specific adenine glycosylase [Corynebacterium
pseudotuberculosis FRC41]
gi|300686639|gb|ADK29561.1| A/G-specific adenine glycosylase [Corynebacterium
pseudotuberculosis FRC41]
Length = 295
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFE 75
E I + + + + + ++++ ++S Q+ V E
Sbjct: 1 MNASEKNNIITALLRWYRANARAIIWRTPETSPWGILLSEVMSQQTPVARVEPIWAQWME 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP+ + ++ ++G R+ + + ++ D ++P +E L LPG
Sbjct: 61 KWPTPRDFAQAPKDEVLRAWGSLGYPRRALR-LHQCAQQIVAVHDGEVPADVEKLLALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQY 192
IG A + + +FG VDT++ R+ +R+ L G K + ++P +
Sbjct: 120 IGDYTARAVAAFSFGQRVAVVDTNVRRVYHRLYLGRYLAGNPSKKEIAEVQALLPEHNAP 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C P C+ C + + C
Sbjct: 180 EFSVALMELGALICTP-TPACEVCPVRSQC 208
>gi|225551746|ref|ZP_03772689.1| endonuclease III [Borrelia sp. SV1]
gi|225371541|gb|EEH00968.1| endonuclease III [Borrelia sp. SV1]
Length = 211
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNANCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|302386860|ref|YP_003822682.1| A/G-specific adenine glycosylase [Clostridium saccharolyticum WM1]
gi|302197488|gb|ADL05059.1| A/G-specific adenine glycosylase [Clostridium saccharolyticum WM1]
Length = 365
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKA 69
L T + L+ + + L + + + + ++ ++ Q+ V
Sbjct: 14 EPREKELDTKERLKAMERPLLTWYSKHARALPWRDRPDPYRVWISEIMLQQTRVEAVKPY 73
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ +++ A+ E +L +G Y +++N+ + +L+ ++ ++P + E
Sbjct: 74 YERFIGDLPGIRELAAVPEDRLLKLWEGLGYYT-RAKNLKKTAELLVEQYGGELPASYEE 132
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLR 184
L +LPGIG A I S+A+GIP VD ++ R+ +R+ + + +E+ L
Sbjct: 133 LKKLPGIGSYTAGAIASIAYGIPVPAVDGNVLRVVSRVTGSREDILKQSVKTRMEEELKA 192
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLC 222
++P + + + L+ G VC P C C +++LC
Sbjct: 193 VMPEEAASSYNQGLIEIGAIVCVPNGPPLCSQCPLASLC 231
>gi|89092426|ref|ZP_01165380.1| adenine glycosylase [Oceanospirillum sp. MED92]
gi|89083514|gb|EAR62732.1| adenine glycosylase [Oceanospirillum sp. MED92]
Length = 349
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 83/216 (38%), Gaps = 12/216 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + + F + +L + + ++ ++ Q+ V + E
Sbjct: 1 MQSKQFASAVLEWFDQH---GRHDLPWQANKTAYNTWISEVMLQQTQVTTVIPYYERFIE 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + + ++ + +G Y ++ N+ + I+ E P+T+E L LPG
Sbjct: 58 RFPNVESLASAEQDEVLHLWTGLGYYA-RARNLHKTAQIVTREHAGAFPETVEELEALPG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPPKH 190
IGR A +LS++ G +D ++ R+ R G K+ + P +
Sbjct: 117 IGRSTAGAVLSISTGKWAPILDGNVKRVLARFYALEGWPGTTANQKKLWSYAEQNTPQQR 176
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G +C KP C C + C ++
Sbjct: 177 VGDYTQAMMDLGATLCTRSKPSCLLCPLQQGCDALR 212
>gi|227327693|ref|ZP_03831717.1| adenine DNA glycosylase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 368
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 84/211 (39%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V + E
Sbjct: 3 QAQQFAHQVLDWYQRYGRKTLPWQLEKTPYKVWLSEVMLQQTQVTTVIPYFQRFMERFPN 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N+ + +++ + P T + + LPG+GR
Sbjct: 63 VSALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVSRHGGEFPTTFDEVAALPGVGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNA 194
A +LS+A G +D ++ R+ R G K VE+ L + P +
Sbjct: 122 TAGAVLSLALGQHYPILDGNVKRVLARCYAVDGWPGKKDVEKKLWARSEDVTPAEGVSQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC +P+C+ C +S C
Sbjct: 182 NQAMMDLGAIVCTRSRPKCELCPLSTGCIAY 212
>gi|237723033|ref|ZP_04553514.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_2_4]
gi|229447555|gb|EEO53346.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_2_4]
Length = 349
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + Q
Sbjct: 1 MNEFTKTIVEWYEENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQ 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGGYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSPNCLFCPLAGGCSALSK 206
>gi|158522177|ref|YP_001530047.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
gi|158511003|gb|ABW67970.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
Length = 220
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
Query: 24 ELEEIFYLFSLKWPS---PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+L+ P L F ++ + LLS ++ D + A + L +A
Sbjct: 7 DLDRFVRELKKARKKSQAPVITLIANRGATPFEILASTLLSLRTKDAVTDAAARRLLAVA 66
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+TP+++ A+ +K++ I +G Y K++ +I +S IL+ D ++P +E L LPG+G
Sbjct: 67 NTPEQIAALPAQKIEKLIYPVGFYPTKAKRLIEISRILLERHDGRVPDEMEALLALPGVG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK AN++L FG I VDTH+ RISNR G+ +TP + E +L + +P K+ +
Sbjct: 127 RKTANLVLIEGFGRDGICVDTHVHRISNRTGIVTTRTPEETEFALRKTLPKKYWKPYNEL 186
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LV +G+ +C P C C + C +
Sbjct: 187 LVSYGQTICVPVSPFCSRCPVEAECPK 213
>gi|227113691|ref|ZP_03827347.1| adenine DNA glycosylase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 368
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E + A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVTTVIPYFQRFMERFPNVNALAAAPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P T + + LPG+GR A +LS+A G +D ++ R+
Sbjct: 88 RNLHKAAQTIVSRHGGEFPTTFDEVAALPGVGRSTAGAVLSLALGQHYPILDGNVKRVLA 147
Query: 166 RIGLAPGKT-PNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC +P+C+ C ++
Sbjct: 148 RCYAVDGWPGKKEVEKKLWARSEDVTPAEGVSQFNQAMMDLGAMVCTRSRPKCELCPLNT 207
Query: 221 LCKRI 225
C
Sbjct: 208 GCIAY 212
>gi|290769924|gb|ADD61694.1| putative protein [uncultured organism]
Length = 351
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 11/219 (5%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ T +++ +F + + K EL + + + ++ ++ Q+ V + +
Sbjct: 1 MRTEEQVLIAMFEALIPWYEAHKRELPWRQDKEPYHVWLSEIMLQQTRVEAVKEYYRRFL 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + E+++ +G Y + N+ + + E+ P + L
Sbjct: 61 TALPTIADLAEAPEEQILKLWEGLGYYN-RVRNLQKAAQTICAEYTGVFPSEYAQIRSLS 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+ F PT VD ++ R+ +R + T ++ + L P K
Sbjct: 120 GIGDYTAGAIASICFDAPTPAVDGNVLRVYSRLLADDANIDLQTTKKRITRKLQETYPQK 179
Query: 190 HQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
+ A L+ G VC P+C C ++ +C+ KQ
Sbjct: 180 NPGIATQALMELGATVCVPNGAPRCDVCPVAEICQARKQ 218
>gi|293372581|ref|ZP_06618963.1| A/G-specific adenine glycosylase [Bacteroides ovatus SD CMC 3f]
gi|292632390|gb|EFF50986.1| A/G-specific adenine glycosylase [Bacteroides ovatus SD CMC 3f]
Length = 349
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + Q
Sbjct: 1 MNEFTKTIVEWYEENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQ 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGGYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSPNCLFCPLAGGCSALSK 206
>gi|257057486|ref|YP_003135318.1| A/G-specific DNA glycosylase [Saccharomonospora viridis DSM 43017]
gi|256587358|gb|ACU98491.1| A/G-specific DNA glycosylase [Saccharomonospora viridis DSM 43017]
Length = 293
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 80/209 (38%), Gaps = 13/209 (6%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + ++V+ ++ Q+ V + E P + A
Sbjct: 6 QTLLDWFDANARDLPWRHADCTPWGVLVSEIMLQQTPVARVLPVWRQWMERWPKPADLAA 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ +G R+ + + I+ E ++P ++ L LPGIG A +
Sbjct: 66 ASQGEVLRAWGKLGYPRRALRLHTAANTIV-AEHGGEVPADVDTLLSLPGIGAYTARAVA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQS---LLRIIPP----KHQYNAHYW 197
+ A+G VDT++ R+ R A P ++ + ++P
Sbjct: 125 AFAYGRRAPVVDTNVRRVVARAVHGAAEAGPPSTKRDLDDVEALLPDGPDEARAARFSAA 184
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G VC ARKP+C C + C K
Sbjct: 185 LMELGALVCIARKPRCDDCPLFADCAWQK 213
>gi|282917142|ref|ZP_06324897.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus D139]
gi|283770952|ref|ZP_06343843.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus H19]
gi|282318769|gb|EFB49124.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus D139]
gi|283459546|gb|EFC06637.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus H19]
Length = 345
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|315641194|ref|ZP_07896271.1| A/G-specific adenine glycosylase [Enterococcus italicus DSM 15952]
gi|315482961|gb|EFU73480.1| A/G-specific adenine glycosylase [Enterococcus italicus DSM 15952]
Length = 381
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 86/215 (40%), Gaps = 9/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ + F + + K +L + + + + ++ ++ Q+ V +
Sbjct: 8 WSQATISAFQEAFLIWYHREKRQLPWREYRDPYAIWISEIMLQQTRVETVIGYYYRFMKE 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + E KL +G Y ++ N+ + ++ E+ + P+ + + L GI
Sbjct: 68 FPTIQDLANAPEDKLLKVWEGLGYYS-RARNLQVAAKQIVTEYGGQFPKRVAEIRELKGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G I S+AFGI +D ++ R+++R+ +A T + + I+ P
Sbjct: 127 GPYTTGAIASIAFGIAEPAIDGNVMRVTSRLFGITDDIAKASTRKVFDAYVRDILSPVEP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C P CQ C + N C K
Sbjct: 187 GEMNQAFMDLGSSICTPTSPDCQRCPLINFCYAYK 221
>gi|240947859|ref|ZP_04752299.1| A/G-specific adenine glycosylase [Actinobacillus minor NM305]
gi|240297821|gb|EER48257.1| A/G-specific adenine glycosylase [Actinobacillus minor NM305]
Length = 378
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 7/197 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + + ++ ++ Q+ V V + + T + ++
Sbjct: 28 QQYGRKHLPWQQNKSLYGVWLSEVMLQQTQVVTVIPYFERFMQRFPTVVDLANASIDEVL 87
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + + +EF + P + L G+GR A ILS P
Sbjct: 88 HLWTGLGYYA-RARNLHKAAQQIRDEFGGEFPTAFADVLALSGVGRSTAGAILSSVLNAP 146
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ +R G K VE L + P + + ++ G +C
Sbjct: 147 HPILDGNVKRVLSRYFAVEGWAGEKPVENRLWALTEAVTPTSQVADFNQAMMDLGAMICT 206
Query: 208 ARKPQCQSCIISNLCKR 224
KP+C C + C+
Sbjct: 207 RSKPKCSLCPLEKNCQA 223
>gi|256821434|ref|YP_003145397.1| A/G-specific adenine glycosylase [Kangiella koreensis DSM 16069]
gi|256794973|gb|ACV25629.1| A/G-specific adenine glycosylase [Kangiella koreensis DSM 16069]
Length = 355
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + E T + + ++ + +G Y ++
Sbjct: 32 QDPYRIWLSEIMLQQTQVTTVIPYFERFVESFPTVLDLAHATDDQVMQHWSGLGYYS-RA 90
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ EF PQ E + LPGIGR A I S AF PT +D ++ R+
Sbjct: 91 RNLHKAAKIIETEFGGDFPQDPEVIETLPGIGRSTAGAIASFAFDQPTAILDGNVKRVLA 150
Query: 166 RIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + + P + + ++ G VC KP C C +S
Sbjct: 151 RCYAIEGWPGNGKVLKALWERAEANTPTQETAAYNQAMMDLGAVVCTRTKPNCPDCPLSK 210
Query: 221 LCKRI 225
C
Sbjct: 211 HCLAY 215
>gi|227502080|ref|ZP_03932129.1| A/G-specific DNA glycosylase [Corynebacterium accolens ATCC 49725]
gi|227077139|gb|EEI15102.1| A/G-specific DNA glycosylase [Corynebacterium accolens ATCC 49725]
Length = 284
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++++ ++S Q+ V + TP
Sbjct: 6 LLSWFDANERDLPWRRPGTSAWGVLLSEVMSQQTPVARVAPVWEEWMRRWPTPADFAQAS 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G R+ +++P ++ L LPGIG A +
Sbjct: 66 RAEVLRAWGKLGYPRRALRL------WECAGVMDEVPSDVDELLALPGIGDYTARAVACF 119
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVE-QSLLRIIPPKHQYNAHYWLVLHGRY 204
FG VDT++ R+ R +P+K E ++ ++P ++ L+ G
Sbjct: 120 HFGQNVPVVDTNVRRVYARAEDGNFLAPSPSKRELAAVAALLPERNGPRFSAALMELGAL 179
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ P C+ C + C
Sbjct: 180 VCTAKNPDCKRCPLRATC 197
>gi|22127215|ref|NP_670638.1| adenine DNA glycosylase [Yersinia pestis KIM 10]
gi|45443228|ref|NP_994767.1| adenine DNA glycosylase [Yersinia pestis biovar Microtus str.
91001]
gi|21960283|gb|AAM86889.1|AE013935_6 adenine glycosylase [Yersinia pestis KIM 10]
gi|45438096|gb|AAS63644.1| A/G-specific adenine glycosylase [Yersinia pestis biovar Microtus
str. 91001]
Length = 415
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 7/214 (3%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + + + + ++ ++ Q+ V +
Sbjct: 43 LMMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLR 102
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
Q + A + + +G Y ++ N+ + +++ + P T + + LPGI
Sbjct: 103 FPDIQALAAAPLDDVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGI 161
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
GR A ILS++ G +D ++ R+ R G K + Q + P
Sbjct: 162 GRSTAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGV 221
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 222 GQFNQAMMDLGAMVCTRSKPKCELCPLNIGCMAY 255
>gi|153004768|ref|YP_001379093.1| A/G-specific adenine glycosylase [Anaeromyxobacter sp. Fw109-5]
gi|152028341|gb|ABS26109.1| A/G-specific adenine glycosylase [Anaeromyxobacter sp. Fw109-5]
Length = 366
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 13/203 (6%)
Query: 35 KWPSPKGELYYV------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + L + + + + ++ ++ Q+ V + T + + A E
Sbjct: 18 WYDAERRALPWRFAQRGADPYRVWISEVMLQQTQVATVVPYFERFVARFPTLEALAAAPE 77
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ R +G Y + + + +P ++ L LPG G A + S+A
Sbjct: 78 DEVLARWRGLGYYARARN--LHAAARAALARHGALPSAVDALRALPGFGPYTAGAVASIA 135
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLL----RIIPPKHQYNAHYWLVLHGR 203
F P VD ++ R+ R+ G ++ L ++PP + + L+ G
Sbjct: 136 FARPAPAVDGNVARVLARLFCVEGSLAAPATQRRLWDLAGELVPPDRPGDFNQALMELGA 195
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC+ P C C + C +
Sbjct: 196 MVCRKAAPGCARCPLRTSCAARR 218
>gi|220911121|ref|YP_002486430.1| HhH-GPD family protein [Arthrobacter chlorophenolicus A6]
gi|219857999|gb|ACL38341.1| HhH-GPD family protein [Arthrobacter chlorophenolicus A6]
Length = 308
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+E + + + +L + + + ++V+ ++ Q+ V V + + TP
Sbjct: 1 MEFLHRRITGWFAETARDLPWRDPGCGAWGVLVSEIMLQQTPVVRVLPVWEEWLKRWPTP 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G R+ + + + ++ + ++P T L LPG+G
Sbjct: 61 AGLAAEPAGEAVRNWGRLGYPRRALR-LHAAATAIVENHNGRVPDTYTELLALPGVGSYT 119
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQY--NA 194
A + + A+G VDT+I R+ R+ + + +R+ +P
Sbjct: 120 AAAVAAFAYGRRETVVDTNIRRVHARLVAGAALPAPALTAAEMRLAASLLPDDDAASVRW 179
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC AR P+C C + + C
Sbjct: 180 NAAVMELGALVCTARAPKCADCPVKDSC 207
>gi|255325860|ref|ZP_05366952.1| base excision DNA repair protein, HhH-GPD family [Corynebacterium
tuberculostearicum SK141]
gi|255297072|gb|EET76397.1| base excision DNA repair protein, HhH-GPD family [Corynebacterium
tuberculostearicum SK141]
Length = 286
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 11/198 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++++ ++S Q+ V + TP
Sbjct: 6 LLSWFDANERDLPWRRPGTSAWGVLLSEVMSQQTPVARVAPVWEEWMRRWPTPADFAQAS 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G R+ + ++P ++ L RLPGIG A +
Sbjct: 66 RAEVLRAWGKLGYPRRALRLWE----CAAAIGEGEVPADVDELLRLPGIGDYTARAVACF 121
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVE-QSLLRIIPPKHQYNAHYWLVLHGRY 204
+G+ VDT++ R+ R P+K E ++ ++P + L+ G
Sbjct: 122 HYGVNVPVVDTNVRRVYARAEDGRFLAPQPSKRELAAVAELLPADNGPRFSAALMELGAL 181
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ P C+ C + C
Sbjct: 182 VCTAKNPSCEQCPLRASC 199
>gi|41615185|ref|NP_963683.1| hypothetical protein NEQ398 [Nanoarchaeum equitans Kin4-M]
gi|40068909|gb|AAR39244.1| NEQ398 [Nanoarchaeum equitans Kin4-M]
Length = 212
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+E++ + + P + F ++A +LS ++ + +A+ +L+ + +
Sbjct: 12 IEDLVKKLNDRLAVPYIWEKTKDPFWALIATVLSIRTREEQTIRASLNLYNKYKDYKNLA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+++++ I+ +G+Y++K++ I +++ + LPG+GRK NV
Sbjct: 72 KAPIEEIEDLIKNVGLYKQKAKWIKTIAQRWDYNKKCDES----FIRNLPGVGRKVGNVY 127
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++ P I VD H+ RI+NR+G KTP + E+ L +IIP ++ ++ LVL GR
Sbjct: 128 LNLVCNKPYIAVDVHVHRIANRLGWVKTKTPEETEKQLYKIIPKEYWPKLNHMLVLFGRN 187
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP+C C + C
Sbjct: 188 ICLPSKPKCDICPL--DCPY 205
>gi|282906270|ref|ZP_06314122.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282330467|gb|EFB59984.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus Btn1260]
Length = 345
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|227834043|ref|YP_002835750.1| A/G-specific DNA glycosylase [Corynebacterium aurimucosum ATCC
700975]
gi|262183471|ref|ZP_06042892.1| A/G-specific DNA glycosylase [Corynebacterium aurimucosum ATCC
700975]
gi|227455059|gb|ACP33812.1| A/G-specific DNA glycosylase [Corynebacterium aurimucosum ATCC
700975]
Length = 286
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 11/196 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + ++++ ++S Q+ V + TPQ + A +
Sbjct: 8 EWFDAHERPLPWREPGTSAWGVLLSEVMSQQTPVARVAPQWEEWMRRWPTPQDLAAASKA 67
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + ++P ++ L LPGIG A + F
Sbjct: 68 DVLRAWGKLGYPRRALRLWE----CAKEIGEGEVPGDVDKLLALPGIGEYTARAVACFHF 123
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPPKHQYNAHYWLVLHGRYVC 206
G VDT++ R+ R P+ ++ + ++P ++ L+ G VC
Sbjct: 124 GHNVPVVDTNVRRVYARAEDGRFLAPSPAKRELAQVEALLPKENGPRFSAALMELGALVC 183
Query: 207 KARKPQCQSCIISNLC 222
A+ P C +C I + C
Sbjct: 184 TAKTPDCAACPIKSTC 199
>gi|311740170|ref|ZP_07714002.1| A/G-specific adenine glycosylase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304725|gb|EFQ80796.1| A/G-specific adenine glycosylase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 286
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 76/198 (38%), Gaps = 11/198 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++++ ++S Q+ V + TP
Sbjct: 6 LLSWFDANERDLPWRRPGTSAWGVLLSEVMSQQTPVARVAPVWEEWMRRWPTPADFAQAT 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G R+ + ++P ++ L RLPGIG A +
Sbjct: 66 RAEVLRAWGKLGYPRRALRLWE----CAAAIGEGEVPADVDKLLRLPGIGDYTARAVACF 121
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVE-QSLLRIIPPKHQYNAHYWLVLHGRY 204
+G+ VDT++ R+ R P+K E ++ ++P ++ L+ G
Sbjct: 122 HYGVNVPVVDTNVRRVYARAEDGRFLAPQPSKRELAAVAELLPAENGPRFSAALMELGAL 181
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ P C+ C + C
Sbjct: 182 VCTAKNPSCEQCPLRASC 199
>gi|226320389|ref|ZP_03795957.1| endonuclease III [Borrelia burgdorferi 29805]
gi|226234198|gb|EEH32911.1| endonuclease III [Borrelia burgdorferi 29805]
Length = 205
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANV+L + P I
Sbjct: 74 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVVLGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 134 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRV 204
>gi|149200173|ref|ZP_01877196.1| adenine glycosylase [Lentisphaera araneosa HTCC2155]
gi|149136710|gb|EDM25140.1| adenine glycosylase [Lentisphaera araneosa HTCC2155]
Length = 357
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 87/216 (40%), Gaps = 15/216 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
K +E+ F L + + + ++V+ ++ Q+T V + FE
Sbjct: 2 RKNIEKDFQDLVSWSKDNYSHLPWRSEVRDLYRVLVSEVMLQQTTVATVLPRYESFFEKF 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ E L + +G YR+ +++ I++ + P E L ++PG+G
Sbjct: 62 PDLASLANADENDLALAWKGLGYYRRAQNLYKAVTM--IHQSGGEFPDGEEELQKVPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH------- 190
A + ++ + VD ++ R+ +R + K+++++ +I K
Sbjct: 120 PYTAAALTAIGRNQLALAVDGNLQRVLSRYFFIEVEQGPKLQKAVHSLIQNKTFAKTLEL 179
Query: 191 --QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ GR +CK R P+C C + N C+
Sbjct: 180 CGPRKFNEALMDLGRAICKPRNPKCGECPLQNSCEA 215
>gi|111219372|ref|XP_001134477.1| hypothetical protein DDB_G0270764 [Dictyostelium discoideum AX4]
gi|90970896|gb|EAS66941.1| hypothetical protein DDB_G0270764 [Dictyostelium discoideum AX4]
Length = 574
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 17/229 (7%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDV 64
L +E++EI + K +L + + + V+ ++ Q+
Sbjct: 86 KLHKFKNKQEIQEIRESMLGWYEKNKRDLPWRKHDNSLDENVIAYRVWVSEIMLQQTRVA 145
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + E T + + +++ +G YR +++N+ S +++ F++KIP
Sbjct: 146 TVIEYFNKWIEKWPTINDLASTTIEEVNKVWSGLGYYR-RAKNLWLGSKYVVDNFNSKIP 204
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLL 183
++ L + GIG A I S+AF P VD ++ R+ +R+ + + +
Sbjct: 205 SDVKSLLEINGIGPYTAGAISSIAFNKPVPLVDGNVIRVLSRVRSIGANPKLSSTVKLFW 264
Query: 184 RIIPP-----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ N + L+ G +C + PQC+ C I + C+ +Q
Sbjct: 265 ELGNDLVESVENPCNFNQSLMELGATICSVQSPQCKQCPIQSNCQAYQQ 313
>gi|29840154|ref|NP_829260.1| adenine glycosylase [Chlamydophila caviae GPIC]
gi|29834502|gb|AAP05138.1| adenine glycosylase [Chlamydophila caviae GPIC]
Length = 369
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + K + + + + V+ ++ Q+ V K E
Sbjct: 8 ERAKKFPVEKLKQWFTDNKRSFPWRDNPSPYNVWVSEVMLQQTRAEVVVKYFIEWMERFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E+ + +G Y + N++ + +++ +F ++P L ++ G+G
Sbjct: 68 TIESLATAKEEDVIKAWEGLGYYT-RVRNLLHGARMVMKDFGGELPDDPLDLMQIKGLGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYN 193
+ IL+ AF T VD ++ R+ +R+ L T V + L ++P K
Sbjct: 127 YTVHAILAFAFKRRTAAVDGNVLRVISRVFLIDASIDLESTKTWVFRITLSLLPAKDPQI 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK R P+C+ C ++ +C K+
Sbjct: 187 ITEALIELGACICK-RVPKCEICPLNAMCGAYKE 219
>gi|57652087|ref|YP_186751.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus COL]
gi|87161368|ref|YP_494501.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195693|ref|YP_500502.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221972|ref|YP_001332794.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510086|ref|YP_001575745.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142380|ref|ZP_03566873.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|262050216|ref|ZP_06023067.1| hypothetical protein SAD30_0913 [Staphylococcus aureus D30]
gi|262052876|ref|ZP_06025060.1| hypothetical protein SA930_0038 [Staphylococcus aureus 930918-3]
gi|284024914|ref|ZP_06379312.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus 132]
gi|294849412|ref|ZP_06790154.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9754]
gi|304378993|ref|ZP_07361743.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|57286273|gb|AAW38367.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus COL]
gi|87127342|gb|ABD21856.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203251|gb|ABD31061.1| A/G-specific adenine glycosylase, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374772|dbj|BAF68032.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368895|gb|ABX29866.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|259159230|gb|EEW44290.1| hypothetical protein SA930_0038 [Staphylococcus aureus 930918-3]
gi|259161678|gb|EEW46269.1| hypothetical protein SAD30_0913 [Staphylococcus aureus D30]
gi|269941339|emb|CBI49736.1| HhH-GPD superfamily base excision DNA repairprotein [Staphylococcus
aureus subsp. aureus TW20]
gi|294823549|gb|EFG39976.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9754]
gi|302751677|gb|ADL65854.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304342424|gb|EFM08313.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196028|gb|EFU26388.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139754|gb|EFW31623.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320142330|gb|EFW34144.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329314544|gb|AEB88957.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus T0131]
gi|329727754|gb|EGG64208.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus 21189]
Length = 345
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|289168020|ref|YP_003446289.1| A/G-specific adenine glycosylase [Streptococcus mitis B6]
gi|288907587|emb|CBJ22424.1| A/G-specific adenine glycosylase [Streptococcus mitis B6]
Length = 393
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 89/216 (41%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 1 MWPDEKIVSFRKKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLD 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + + ++ +F + P T EG++ L G
Sbjct: 61 WFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQTAAQQIMTDFGGQFPNTYEGISSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPKH 190
IG A I S+AF + VD ++ R+ R+ K+ Q+++ +I P+
Sbjct: 120 IGPYTAGAISSIAFNLTEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILIDPEK 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 180 PGDFNQALMDLGSDIEAPVNPRPEESPVKDFSAAYQ 215
>gi|313835761|gb|EFS73475.1| putative endonuclease III [Propionibacterium acnes HL037PA2]
gi|314928435|gb|EFS92266.1| putative endonuclease III [Propionibacterium acnes HL044PA1]
gi|314970131|gb|EFT14229.1| putative endonuclease III [Propionibacterium acnes HL037PA3]
Length = 189
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 93/172 (54%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+LSAQ+TD VN T LF Q + +++ + +G ++E ++S++ L
Sbjct: 1 MLSAQTTDRRVNTVTPTLFNRWPDTQTLADADVGEVEAVVAPLGFGPTRAERLVSMATQL 60
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+++FD +P L+ L LPG+GRK ANV+L A+G+P I DTH+ R+S R+G TP
Sbjct: 61 VDDFDGVVPDDLDSLVTLPGVGRKTANVVLGNAYGVPGITPDTHVMRVSRRLGWTDATTP 120
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
KVE L + P + L+ HGR C +R+P C C ++ C +
Sbjct: 121 AKVEVDLAELFDPSEWVMLCHRLIWHGRRSCHSRRPACGVCPVAEWCPSFGE 172
>gi|283471138|emb|CAQ50349.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ST398]
Length = 345
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|149186054|ref|ZP_01864368.1| hypothetical protein ED21_29994 [Erythrobacter sp. SD-21]
gi|148830085|gb|EDL48522.1| hypothetical protein ED21_29994 [Erythrobacter sp. SD-21]
Length = 340
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 14/207 (6%)
Query: 28 IFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + +L + + + + ++ ++ Q+T V T
Sbjct: 5 VSDKLLDWYDAHARDLPWRARPGEPAPDPYRVWLSEVMLQQTTVAAVKPYFAAFTLRWAT 64
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A E+ + +G Y + + + + + L +LPG+G
Sbjct: 65 VEALAAAPEEDVMAAWAGLGYYSRARNLVKAARAVADLGAFPDTEE---ELRKLPGLGAY 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AFG + VD ++ R+ R+ P + + I P +
Sbjct: 122 TAAAVAAIAFGRRAVVVDANVERVVARLFALKEPLPGVRKAIRAATDTITPDNRAGDFAQ 181
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
++ G +C AR P+C C + C+
Sbjct: 182 AMMDLGSSICTARDPKCLLCPLERDCR 208
>gi|282923203|ref|ZP_06330884.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9765]
gi|282593114|gb|EFB98113.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9765]
Length = 345
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEILSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|262370787|ref|ZP_06064111.1| A/G specific adenine glycosylase [Acinetobacter johnsonii SH046]
gi|262314149|gb|EEY95192.1| A/G specific adenine glycosylase [Acinetobacter johnsonii SH046]
Length = 344
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 11/196 (5%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + V+ ++ Q+ V + + E T + + ++ Y
Sbjct: 19 RHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFERFIERFPTVEALGTASWDEVAPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + + PQTLE LPGIG A ++S+ + +
Sbjct: 79 GLGYYARARNLHKAAGVVARQGHF---PQTLEDWIELPGIGPSTAGALMSLGLRQYGVIM 135
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R V + + + P + ++ ++ G VC +KP
Sbjct: 136 DGNVKRVLARFFAIEDDLSKPVHERSMWQLATEVCPTERNHDYTQAIMDLGATVCTPKKP 195
Query: 212 QCQSCIISNLCKRIKQ 227
C C + CK Q
Sbjct: 196 LCLYCPMQQHCKAHAQ 211
>gi|218249183|ref|YP_002375244.1| endonuclease III [Borrelia burgdorferi ZS7]
gi|225548988|ref|ZP_03769965.1| endonuclease III [Borrelia burgdorferi 94a]
gi|218164371|gb|ACK74432.1| endonuclease III [Borrelia burgdorferi ZS7]
gi|225370591|gb|EEH00028.1| endonuclease III [Borrelia burgdorferi 94a]
Length = 205
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 134 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRV 204
>gi|83644197|ref|YP_432632.1| A/G-specific adenine glycosylase [Hahella chejuensis KCTC 2396]
gi|83632240|gb|ABC28207.1| A/G-specific adenine glycosylase [Hahella chejuensis KCTC 2396]
Length = 388
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + ++ ++ Q+ V E T +
Sbjct: 33 ARLLTWFDQHGRHDLPWQDPRTPYHVWISEIMLQQTQVSTVIPYFIKFMESFPTVAALAE 92
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + ++ +G Y ++ N+ + ++ +F+ + P TLE + LPGIGR A IL
Sbjct: 93 ADQDTVLSHWAGLGYYA-RARNLHKAAKTIVEKFNGEFPNTLETIQELPGIGRSTAGAIL 151
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVL 200
SM FGI +D ++ R+ R G ++E L + P + + ++
Sbjct: 152 SMGFGIRAPILDGNVKRVLCRHDAIEGWPGKREIETRLWELADAYTPEERVTDYTQAIMD 211
Query: 201 HGRYVCKARKPQCQSCIISNLCK 223
G +C KP C C + C+
Sbjct: 212 LGATLCTRSKPACARCPMETTCQ 234
>gi|325291271|ref|YP_004267452.1| A/G-specific adenine glycosylase [Syntrophobotulus glycolicus DSM
8271]
gi|324966672|gb|ADY57451.1| A/G-specific adenine glycosylase [Syntrophobotulus glycolicus DSM
8271]
Length = 361
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + ++ ++ Q+ V E T +++
Sbjct: 25 RILLEWYDQNARLLPWRKDCIPYHIWLSEIMLQQTRVEVVKTYYTRFLEEIPTVEELAQT 84
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+KL +G Y ++ N+ + +++E+ P+T E L +LPG+G A I S
Sbjct: 85 DEQKLLKLWEGLGYYS-RARNLQKTARRIVDEYVGHFPETYEQLLKLPGVGPYTAGAIAS 143
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ FG P VD ++ R+ +RI + + SL+ I P + L+
Sbjct: 144 ICFGQPVPAVDGNVLRVISRIMGLDDRVKASEGKKLITASLVEIYPKDRSGDFTQSLMEL 203
Query: 202 GRYVCKAR-KPQCQSCIISNLCKRIK 226
G VC + P+C+ C +S CK +
Sbjct: 204 GATVCLPKGTPKCRICPVSTFCKAFQ 229
>gi|331005989|ref|ZP_08329332.1| A/G-specific adenine glycosylase [gamma proteobacterium IMCC1989]
gi|330420165|gb|EGG94488.1| A/G-specific adenine glycosylase [gamma proteobacterium IMCC1989]
Length = 348
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + + + + + N+ +G Y +
Sbjct: 28 RTAYRVWVSEIMLQQTQVTTVIPYYERFMNSFPSVFDLARASQDDVLNHWAGLGYYA-RG 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ P+T++GL L GIGR A I+S++ G +D ++ R+
Sbjct: 87 RNLHKCAQAVVDLHQGNFPETVDGLVALSGIGRSTAGAIISLSSGKRATILDGNVKRVLA 146
Query: 166 RIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G T + Q P + + + ++ G +C KP CQ C +
Sbjct: 147 RYHGVEGWTGKVSVAETLWQYAEEHTPEQRCDDFNQAMMDLGATLCTRSKPDCQRCPLKP 206
Query: 221 LCKRIKQ 227
C +
Sbjct: 207 NCYAYAE 213
>gi|188534966|ref|YP_001908763.1| adenine DNA glycosylase [Erwinia tasmaniensis Et1/99]
gi|188030008|emb|CAO97892.1| A/G-specific adenine glycosylase [Erwinia tasmaniensis Et1/99]
Length = 361
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPDVSDLAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAKTVVEKHGGVFPQTFAEVADLPGVGRSTAGAILSLALGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + ++ G VC KP+C+ C +++
Sbjct: 147 RCYAVAGWPGRKEVEKRLWQISEEVTPADGVSRFNQAMMDIGAIVCTRSKPKCEICPVNS 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCMAY 211
>gi|187918601|ref|YP_001884164.1| endonuclease III [Borrelia hermsii DAH]
gi|119861449|gb|AAX17244.1| endonuclease III [Borrelia hermsii DAH]
Length = 211
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 103/201 (51%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++ I ++P K L + N++ L++ V+LSA++TD VNK F+ + +
Sbjct: 10 IDLIVDETLSRYPDVKPFLTFRNNYELLIMVILSARTTDNMVNKIAPKFFKRYGDFESLA 69
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ I +G Y KS+ II+ + +++ +F IP + L LPG+GRK ANVI
Sbjct: 70 NADLIDVKQLIYKLGFYSNKSKYIINCARMILEKFKGIIPNNIFDLVSLPGVGRKTANVI 129
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + + P I VDTH R+ R G+ +TP ++E L IP QY + H R
Sbjct: 130 LGVIYNKPAIIVDTHFSRVVIRHGITFKRTPLEIELDLKSKIPADKQYRFSMAINRHARD 189
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+C +R C++C + R+
Sbjct: 190 ICTSRSKTCKNCFLEKFAPRL 210
>gi|163847014|ref|YP_001635058.1| HhH-GPD family protein [Chloroflexus aurantiacus J-10-fl]
gi|222524837|ref|YP_002569308.1| HhH-GPD family protein [Chloroflexus sp. Y-400-fl]
gi|163668303|gb|ABY34669.1| HhH-GPD family protein [Chloroflexus aurantiacus J-10-fl]
gi|222448716|gb|ACM52982.1| HhH-GPD family protein [Chloroflexus sp. Y-400-fl]
Length = 316
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 77/201 (38%), Gaps = 8/201 (3%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + + + ++VA ++ Q+ V T + + +
Sbjct: 16 LLEWFAGNARDLPWRRTRDPYAIMVAEIMLQQTQVDRVIPKYHAFLATFPTLKALASAPT 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ +G R+ N+ + I++ ++ K+P ++ L LPGIG A I A
Sbjct: 76 AEVIRLWAGLGYNRRAV-NLQRAAQIIVEQYGGKVPDSVAVLRTLPGIGPYTAGAIACFA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ----SLLRIIPPKHQYNAHYWLVLHGRY 204
F + +DT+I R+ R+ + P + ++P + + ++ G
Sbjct: 135 FEQDVVFLDTNIRRVVRRLCVGSDLLPTPSDAVLLVHAETLLPVGQGWMWNQAIMELGAL 194
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+C P C C + C+
Sbjct: 195 ICTTSNPACWRCPLRQYCRAY 215
>gi|260775575|ref|ZP_05884472.1| A/G-specific adenine glycosylase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608756|gb|EEX34921.1| A/G-specific adenine glycosylase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 351
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYEDYGRKSLPWQQDKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ ++ + P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKIVAEQYQGEFPLNIEQMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVE----QSLLRIIPPKHQYNAHYWLVLHGRY 204
P +D ++ R R G KVE Q P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWQHAEEHTPDTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C +S+ C KQ
Sbjct: 189 VCTRSKPKCTLCPVSSFCAAYKQ 211
>gi|302331441|gb|ADL21635.1| A/G-specific DNA glycosylase [Corynebacterium pseudotuberculosis
1002]
Length = 310
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFE 75
E I + + + + + ++++ ++S Q+ V E
Sbjct: 16 MNASEKNNIITALLRWYRANARAIIWRTPETSPWGILLSEVMSQQTPVARVEPIWAQWME 75
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP+ + ++ ++G R+ + + ++ D ++P +E L LPG
Sbjct: 76 KWPTPRDFAQAPKDEVLRAWGSLGYPRRALR-LHQCAQQIVAVHDGEVPADVEKLLALPG 134
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQY 192
IG A + + +FG VDT++ R+ +R+ L G K + ++P +
Sbjct: 135 IGDYTARAVAAFSFGQRVAVVDTNVRRVYHRLYLGRYLAGNPSKKEIAEVQALLPEHNAP 194
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C P C+ C + + C
Sbjct: 195 EFSVALMELGALICTP-TPACEVCPVRSQC 223
>gi|299146727|ref|ZP_07039795.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_23]
gi|298517218|gb|EFI41099.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_23]
Length = 349
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + Q
Sbjct: 1 MNEFTKTIVEWYEENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQ 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGEYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSPNCLFCPLAGGCSALSK 206
>gi|291086173|ref|ZP_06355020.2| A/G-specific adenine glycosylase [Citrobacter youngae ATCC 29220]
gi|291068437|gb|EFE06546.1| A/G-specific adenine glycosylase [Citrobacter youngae ATCC 29220]
Length = 383
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 61 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLAHAPLDEVLHLWTGLGYYA-RA 119
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ PQT + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 120 RNLHKAAQQVVALHGGTFPQTFDEVAALPGVGRSTAGAILSLSLGQHFPILDGNVKRVLA 179
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + ++ G VC KP+C C + N
Sbjct: 180 RCYAVSGWPGKKEVEKKLWELSEQVTPAHGVERFNQAMMDLGAMVCTRSKPKCSLCPLEN 239
Query: 221 LC 222
C
Sbjct: 240 GC 241
>gi|254784589|ref|YP_003072017.1| A/G-specific adenine glycosylase [Teredinibacter turnerae T7901]
gi|237686175|gb|ACR13439.1| A/G-specific adenine glycosylase [Teredinibacter turnerae T7901]
Length = 352
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 10/206 (4%)
Query: 30 YLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + ++ ++ Q+ V + +
Sbjct: 6 DRLLAWFDDHGRKNLPWQHPITPYRVWLSEIMLQQTQVETVIPYFERFVAKFSGFASLAE 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ + +G Y ++ N+ + ++ + +P + L +LPGIGR A I
Sbjct: 66 APLDEVLHLWTGLGYYA-RARNLHRCAQQVVAQHGGDMPSDMAELEQLPGIGRSTAAAIA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+AF P +D ++ R+ R G + + Q + +P + + ++
Sbjct: 125 SIAFEQPCAILDGNVKRVLARYHAVEGWPGKSSVHDTLWQFAEKHMPRERCRDYTQAIMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
G +C PQC+ C + CK K
Sbjct: 185 LGATLCTRANPQCEVCPMRRGCKAKK 210
>gi|219683042|ref|YP_002469425.1| A/G-specific adenine glycosylase [Bifidobacterium animalis subsp.
lactis AD011]
gi|219620692|gb|ACL28849.1| probable A/G-specific adenine glycosylase [Bifidobacterium animalis
subsp. lactis AD011]
Length = 354
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI-------FYLFSLKWPSPKGELYYV----NHFTLIVA 54
KS +P + + E+ + W + +L + + ++V
Sbjct: 38 KSRKRAQATPEQTVG-ERRARELERSARQALRELATWWQTSARDLPWRYGRTTPWGVLVC 96
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + + A + ++ +G R+ + + +
Sbjct: 97 EVMSQQTQMSRVVPYWEAWMSQWPDAASLAAAEKSEVIRAWGRLGYPRRALR-LQECAEV 155
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---AP 171
+ ++D+++P+ + L LP +G A+ +LS A+G +DT+I R +R L +
Sbjct: 156 VARDYDDRLPREYDELMALPSVGDYTASAVLSFAYGERVAVIDTNIRRALSRAFLGVESL 215
Query: 172 GKTPNKVEQS-LLRIIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G + +E++ ++P + + ++ G VC A+ PQC+ C + C+ +K
Sbjct: 216 GGSCTPLERALAWVVLPKAVEQSVLWNQAVMELGALVCTAKAPQCEQCPLQPQCEFVK 273
>gi|221217943|ref|ZP_03589410.1| endonuclease III [Borrelia burgdorferi 72a]
gi|225549905|ref|ZP_03770866.1| endonuclease III [Borrelia burgdorferi 118a]
gi|221192249|gb|EEE18469.1| endonuclease III [Borrelia burgdorferi 72a]
gi|225369364|gb|EEG98816.1| endonuclease III [Borrelia burgdorferi 118a]
Length = 211
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVVTRHALSLENSPIKIELDLKRRINPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|37520225|ref|NP_923602.1| endonuclease III [Gloeobacter violaceus PCC 7421]
gi|35211218|dbj|BAC88597.1| endonuclease III [Gloeobacter violaceus PCC 7421]
Length = 232
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
Query: 31 LFSLKWPSPKG-ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +P L N F +VA +L+ Q D VNK T LF P A +
Sbjct: 18 KLKVAYPRGLTLGLSSTNPFEYLVATVLATQCRDERVNKITPALFARYPDPAAFAAADYE 77
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
L +R G+ K+ N+ ++ +L+ K+P T+ LT LPG+ RK AN++L+
Sbjct: 78 ALLPLVRPTGLGPTKARNLTAIGRLLLERHAGKVPATMAELTALPGVARKIANLVLADCH 137
Query: 150 GIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
GI VDTH+ RIS +GL K+E+ L+ +P + + +V HGR C A
Sbjct: 138 GIVEGVAVDTHVRRISKLLGLTDSTDAAKIERDLMDCLPRDAWRSWNNLMVEHGRQCCVA 197
Query: 209 RKPQCQSCIISNLCKRIKQ 227
P+C +C + C ++
Sbjct: 198 GAPRCTACPLVEDCPGGRE 216
>gi|307129775|ref|YP_003881791.1| adenine DNA glycosylase [Dickeya dadantii 3937]
gi|306527304|gb|ADM97234.1| adenine DNA glycosylase [Dickeya dadantii 3937]
Length = 363
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + + + ++ + + ++ ++ Q+ V +
Sbjct: 1 MMQAQRFAQQVLEWYERYGRKTLPWQLEKTPYKVWLSEVMLQQTQVTTVIPYFERFMARF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T ++ A ++ + +G Y ++ N+ + +++ + P + + LPG+G
Sbjct: 61 PTVAELAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVDRHGGEFPTRFDDIADLPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ G +D ++ R+ R G +VE+ L + P
Sbjct: 120 RSTAGAILSLSLGQHYPILDGNVKRVLARCYAVAGWPGKKEVEKRLWTLSETVTPAHGVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC +P+C+ C +SN C
Sbjct: 180 KFNQAMMDLGAMVCTRSRPKCELCPLSNGCIAY 212
>gi|332796258|ref|YP_004457758.1| DNA-(apurinic or apyrimidinic site) lyase [Acidianus hospitalis W1]
gi|332693993|gb|AEE93460.1| DNA-(apurinic or apyrimidinic site) lyase [Acidianus hospitalis W1]
Length = 232
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 26 EEIFYLFSLKWP-SPK------GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+EI + PK + + + F +++A LLS STD KA L E
Sbjct: 6 KEIIERLRKTYKRDPKEYVAYDVWINFKDPFKVLIATLLSQNSTDKGTYKAFYTLEEKIG 65
Query: 79 TPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTLEG 129
L + + + IR IGIYR K+E I L+ I+ +++ + + E
Sbjct: 66 VTPDNLIKSSLEDIASCIRNIGIYRIKAERIKELAKIIKEKYNGDLNKILDKEPKEAREE 125
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPGIG K A+V+L G P VDTHI RIS R+G+A G ++ SL+R+ PK
Sbjct: 126 LLSLPGIGEKTADVVLLTCKGYPYFPVDTHIKRISQRLGIASGSY-EQISASLMRLFDPK 184
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
AH+ L+ HGR VCKA+ P C+ CI+++ C+ +
Sbjct: 185 DYLEAHHLLIAHGRNVCKAKNPLCEKCILNDCCEYYSR 222
>gi|313898719|ref|ZP_07832254.1| A/G-specific adenine glycosylase [Clostridium sp. HGF2]
gi|312956603|gb|EFR38236.1| A/G-specific adenine glycosylase [Clostridium sp. HGF2]
Length = 368
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 82/219 (37%), Gaps = 10/219 (4%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ + ++ + L + + + + V+ ++ Q+ V +
Sbjct: 15 KRMKLQHDKKKFTEQLLDWYDQNARVLPWREDASPYRVWVSEIMLQQTRVEAVKPYFERF 74
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ + + + E L+ +G Y + N+ + + + +P T E L +L
Sbjct: 75 IQALPSLKALAEADEDTLRKLWEGLGYYN-RVRNMKKCAMECMERHNGVLPDTYEELLKL 133
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPP 188
PGIG A I S+A+ VD ++ R+ +R + +T K + + IP
Sbjct: 134 PGIGAYTAGAIASIAYKRCVPAVDGNVLRVFSRVLVSEDDILKERTKKKFQDIIQEYIPE 193
Query: 189 KHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
+ L+ G VC P+C C +++ C +
Sbjct: 194 HRSDAFNQALMEIGALVCVPNAAPRCNICPLASECMGYQ 232
>gi|297208892|ref|ZP_06925297.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|296886453|gb|EFH25381.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
Length = 345
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|206579997|ref|YP_002236589.1| A/G-specific adenine glycosylase [Klebsiella pneumoniae 342]
gi|288933571|ref|YP_003437630.1| A/G-specific adenine glycosylase [Klebsiella variicola At-22]
gi|290511362|ref|ZP_06550731.1| adenine DNA glycosylase [Klebsiella sp. 1_1_55]
gi|206569055|gb|ACI10831.1| A/G-specific adenine glycosylase [Klebsiella pneumoniae 342]
gi|288888300|gb|ADC56618.1| A/G-specific adenine glycosylase [Klebsiella variicola At-22]
gi|289776355|gb|EFD84354.1| adenine DNA glycosylase [Klebsiella sp. 1_1_55]
Length = 352
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQ+ E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 89 RNLHKAAQQVATQHGGIFPQSFEEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C+ C +SN
Sbjct: 149 RCYAVSGWPGKKEVEKRLWDISEEVTPAQGVERFNQAMMDLGAMVCTRSKPKCELCPLSN 208
Query: 221 LCKRI 225
C
Sbjct: 209 GCVAY 213
>gi|72383043|ref|YP_292398.1| A/G-specific DNA-adenine glycosylase [Prochlorococcus marinus str.
NATL2A]
gi|72002893|gb|AAZ58695.1| A/G-specific DNA-adenine glycosylase [Prochlorococcus marinus str.
NATL2A]
Length = 384
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 9/190 (4%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + +A ++ Q+ V K + T + + L + +G Y +
Sbjct: 44 SPYGIWIAEVMLQQTQLKVVIPYWKKWMKCFPTLSYLAEADLENLLMIWQGLGYYSRAKR 103
Query: 107 NIISLSHIL------INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
S ++ ++ + P ++ LPGIGR A I+S AF +PT +D ++
Sbjct: 104 IHQSSKILVEFVGKNRDQDPDSWPNQIDKWMSLPGIGRSTAGSIISSAFDLPTPILDGNV 163
Query: 161 FRISNRIGLAPGKTPNKVEQSLLR---IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
RI +R+ K+ + +I + + + L+ G +C + P C SC
Sbjct: 164 KRILSRLLAIERKSIRDERKLWEFSSLLIERQSPRDFNQALMDLGAIICTPKNPSCSSCP 223
Query: 218 ISNLCKRIKQ 227
+ N C +
Sbjct: 224 LQNFCVAYTK 233
>gi|322419437|ref|YP_004198660.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
gi|320125824|gb|ADW13384.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
Length = 218
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 99/180 (55%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++V+ +LS ++ D +A+ LF +A +PQKM+ + +++ I +G YR K+
Sbjct: 33 RDPFKVLVSCILSLRTRDQTTAEASARLFALAGSPQKMVRLSVPQIEEAIYPVGFYRVKA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
E I +S L + ++P LE L + G+GRK AN++L++ F P I VD H+ RI N
Sbjct: 93 EQIFEISRQLCELYQGEVPDDLETLLKFKGVGRKTANLVLTLGFSKPGICVDIHVHRICN 152
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R G TP + E +L + +P ++ + LV G+ C P+C +C + C R+
Sbjct: 153 RWGYVKTATPEQTEFALRKKLPVEYWIIINDLLVTFGQNQCTPVSPRCSTCPLYQFCDRV 212
>gi|224532627|ref|ZP_03673249.1| endonuclease III [Borrelia burgdorferi WI91-23]
gi|224512483|gb|EEF82862.1| endonuclease III [Borrelia burgdorferi WI91-23]
Length = 205
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKAGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 134 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFAPRV 204
>gi|152989812|ref|YP_001355534.1| endonuclease III [Nitratiruptor sp. SB155-2]
gi|151421673|dbj|BAF69177.1| endonuclease III [Nitratiruptor sp. SB155-2]
Length = 221
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 8/209 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY--------VNHFTLIVAVLLSAQSTDVNVNKATK 71
++ +EI + ++ +T++++ LLS ++ D A
Sbjct: 1 MKIEQFQEIIKILRDEYKKWDAPAKRLSQSYTYKRTPYTILISTLLSFRTKDEVTFDAAH 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF +AD P ML + + ++ I +G YR+K+ +I ++S L FD +P TLE L
Sbjct: 61 RLFLLADNPYDMLKVPRETIEQTIYPVGFYRQKARSIQAVSKELTERFDRAVPDTLEALV 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+ GIG K A ++L AFG P + VDTH+ RI N GL +P + ++ L +++ + +
Sbjct: 121 SIKGIGHKTAKIVLENAFGKPYVAVDTHVHRICNIWGLVNTVSPQETDKRLEKMLKEEDK 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISN 220
+ LV G+ +CK ++P C+ C +
Sbjct: 181 RGLNKILVSFGQTICKPQRPHCEECPLKE 209
>gi|6691527|dbj|BAA89339.1| hMYHalpha4 [Homo sapiens]
gi|6691539|dbj|BAA89345.1| hMYHgamma4 [Homo sapiens]
gi|119627403|gb|EAX06998.1| mutY homolog (E. coli), isoform CRA_f [Homo sapiens]
gi|119627405|gb|EAX07000.1| mutY homolog (E. coli), isoform CRA_f [Homo sapiens]
Length = 429
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 5/187 (2%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T Q + + +++ +G Y +
Sbjct: 5 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 64
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ + LPG+GR A I S+AFG T VD ++ R+
Sbjct: 65 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 124
Query: 166 RIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R+ + ++ +++ P + + + G VC ++P C C + +
Sbjct: 125 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVES 184
Query: 221 LCKRIKQ 227
LC+ ++
Sbjct: 185 LCRARQR 191
>gi|224533298|ref|ZP_03673892.1| endonuclease III [Borrelia burgdorferi CA-11.2a]
gi|224513463|gb|EEF83820.1| endonuclease III [Borrelia burgdorferi CA-11.2a]
Length = 211
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVVTRHALSLESSPIKIELDLKRRINPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|42557689|emb|CAF28664.1| putative endonuclease III [uncultured crenarchaeote]
Length = 219
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 98/180 (54%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F +++ +LSA++ D N + K+LF+ + K +++ I +IG Y K++
Sbjct: 37 DPFKILIGTILSARTRDENTTRVLKYLFDKFRDIDGISKAELKDIRDSIHSIGFYNIKAK 96
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
I + +LI +FD+K+P LE L LPG+GRK AN +L AF P I VD H+ RISNR
Sbjct: 97 RIKQVVQLLIEKFDSKVPSNLEELLTLPGVGRKTANCVLVYAFNQPAIPVDVHVHRISNR 156
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+G+ + + E L II + + V +G+ VC KP+C C + +CK K
Sbjct: 157 LGIVNTRKVEETELELCNIIDKEMWIEVNDTFVTYGQNVCLPIKPKCNICQLKKMCKFYK 216
>gi|289177488|gb|ADC84734.1| A/G-specific adenine DNA glycosylase [Bifidobacterium animalis
subsp. lactis BB-12]
Length = 354
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEI-------FYLFSLKWPSPKGELYYV----NHFTLIVA 54
KS +P + + E+ + W + +L + + ++V
Sbjct: 38 KSRKRAQATPEQTVG-ERRARELERSARQALRELATWWQTSARDLPWRYGRTTPWGVLVC 96
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + + A + ++ +G R+ + + +
Sbjct: 97 EVMSQQTQMSRVVPYWEAWMSQWPDAASLAAAEKSEVIRAWGRLGYPRRALR-LQECAEV 155
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL---AP 171
+ ++D+++P+ + L LP +G A+ +LS A+G +DT+I R +R L +
Sbjct: 156 VARDYDDRLPREYDELMALPSVGDYTASAVLSFAYGERVAVIDTNIRRALSRAFLGVESL 215
Query: 172 GKTPNKVEQS-LLRIIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G + +E++ ++P + + ++ G VC A+ PQC+ C + C+ +K
Sbjct: 216 GGSCTPLERALAWVVLPKAAEQSVLWNQAVMELGALVCTAKAPQCEQCPLQPQCEFVK 273
>gi|224540248|ref|ZP_03680787.1| hypothetical protein BACCELL_05161 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518127|gb|EEF87232.1| hypothetical protein BACCELL_05161 [Bacteroides cellulosilyticus
DSM 14838]
Length = 346
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ +
Sbjct: 6 EKLIAWYAENKRELPWRDTTDPYIIWISEIILQQTRVAQGYDYFLRFIHRFPNVTALAEA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y + + + P T EG+ L G+G A I S
Sbjct: 66 PEDEVMKCWQGLGYYSRARNLHAAAKS-----MNGVFPATYEGVRALKGVGDYTAAAICS 120
Query: 147 MAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R + + ++ + + + ++
Sbjct: 121 SAYGMPYAVVDGNVYRVLSRYFGIDTPVDSTEGKKLFAALADEMMDKSQPAVYNQAIMDF 180
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C + + C +K+
Sbjct: 181 GAIQCTPQSPNCLFCPLVDSCSALKE 206
>gi|149369659|ref|ZP_01889511.1| A/G-specific adenine glycosylase [unidentified eubacterium SCB49]
gi|149357086|gb|EDM45641.1| A/G-specific adenine glycosylase [unidentified eubacterium SCB49]
Length = 356
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K L + N + + ++ ++ Q+ + +
Sbjct: 10 KTLITWYLHSKRNLPWRSVSNPYFIWLSEIILQQTRVAQGTPYYFKFISAFPNVKDLAEA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+ + + +G Y ++ N+ + + ++ + + P T + +L G+G A+ I S
Sbjct: 70 DEETVLKLWQGLGYYS-RARNLHAAAKYIMTDLNGVFPTTFSEILKLKGVGDYTASAIAS 128
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ F PT VD +++R+ +R + + + ++I + ++
Sbjct: 129 ICFNEPTAVVDGNVYRVLSRYYGIATPINSTPGIKEFKLLAQKLIDASQPGTHNQAMMEF 188
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C +C+ + C ++
Sbjct: 189 GAMHCLPKNPDCINCVFNATCVAYQK 214
>gi|50119916|ref|YP_049083.1| adenine DNA glycosylase [Pectobacterium atrosepticum SCRI1043]
gi|49610442|emb|CAG73887.1| A/G-specific adenine glycosylase [Pectobacterium atrosepticum
SCRI1043]
Length = 368
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E + A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVTTVIPYFQRFMERFPNVNTLAAAPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ K P T + + LPGIGR A +LS++ G +D ++ R+
Sbjct: 88 RNLHKAAQAIVSRHGGKFPTTFDEVAALPGIGRSTAGAVLSLSLGQHYPILDGNVKRVLA 147
Query: 166 RIGLAPGKT-PNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC +P+C+ C +S
Sbjct: 148 RCYAVDGWPGKKEVEKKLWARSEDVTPAEGVSQFNQAMMDLGAMVCTRSRPKCELCPLST 207
Query: 221 LCKRI 225
C
Sbjct: 208 GCVAY 212
>gi|49484109|ref|YP_041333.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|257425999|ref|ZP_05602421.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428672|ref|ZP_05605067.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431282|ref|ZP_05607658.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257434000|ref|ZP_05610351.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436904|ref|ZP_05612946.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus M876]
gi|282904445|ref|ZP_06312331.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C160]
gi|282909187|ref|ZP_06317003.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282911493|ref|ZP_06319293.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914664|ref|ZP_06322449.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus M899]
gi|282919633|ref|ZP_06327365.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C427]
gi|282925105|ref|ZP_06332765.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C101]
gi|283958628|ref|ZP_06376074.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293507741|ref|ZP_06667583.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510759|ref|ZP_06669461.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus M809]
gi|293539298|ref|ZP_06671977.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus M1015]
gi|295428448|ref|ZP_06821075.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590148|ref|ZP_06948788.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus MN8]
gi|49242238|emb|CAG40945.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|257271142|gb|EEV03299.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257274316|gb|EEV05828.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257277931|gb|EEV08587.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257280926|gb|EEV11070.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257283693|gb|EEV13818.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313063|gb|EFB43461.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C101]
gi|282316271|gb|EFB46648.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C427]
gi|282321378|gb|EFB51704.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus M899]
gi|282324502|gb|EFB54814.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282326755|gb|EFB57052.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282595145|gb|EFC00111.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus C160]
gi|283789668|gb|EFC28490.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919833|gb|EFD96902.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus M1015]
gi|291094804|gb|EFE25072.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466390|gb|EFF08914.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus M809]
gi|295127430|gb|EFG57069.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577276|gb|EFH95990.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus MN8]
gi|312437667|gb|ADQ76738.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus TCH60]
gi|315193328|gb|EFU23725.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus CGS00]
Length = 345
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|149367040|ref|ZP_01889073.1| A/G-specific adenine glycosylase [Yersinia pestis CA88-4125]
gi|218928123|ref|YP_002345998.1| adenine DNA glycosylase [Yersinia pestis CO92]
gi|229837648|ref|ZP_04457810.1| adenine DNA glycosylase [Yersinia pestis Pestoides A]
gi|229840872|ref|ZP_04461031.1| adenine DNA glycosylase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842567|ref|ZP_04462722.1| adenine DNA glycosylase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229903773|ref|ZP_04518886.1| adenine DNA glycosylase [Yersinia pestis Nepal516]
gi|115346734|emb|CAL19618.1| A/G-specific adenine glycosylase [Yersinia pestis CO92]
gi|149290654|gb|EDM40730.1| A/G-specific adenine glycosylase [Yersinia pestis CA88-4125]
gi|229679543|gb|EEO75646.1| adenine DNA glycosylase [Yersinia pestis Nepal516]
gi|229690877|gb|EEO82931.1| adenine DNA glycosylase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697238|gb|EEO87285.1| adenine DNA glycosylase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229704336|gb|EEO91347.1| adenine DNA glycosylase [Yersinia pestis Pestoides A]
gi|320013967|gb|ADV97538.1| adenine DNA glycosylase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 371
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + Q + A + + +G Y ++
Sbjct: 28 KTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPDIQALAAAPLDDVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P T + + LPGIGR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQMVVEHHQGEFPTTFDQILALPGIGRSTAGAILSLSLGQHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K + Q + P + ++ G VC KP+C+ C ++
Sbjct: 147 RCYAVDGWPGKKEVEGRLWQISEDVTPANGVGQFNQAMMDLGAMVCTRSKPKCELCPLNI 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCMAY 211
>gi|302206875|gb|ADL11217.1| A/G-specific DNA glycosylase [Corynebacterium pseudotuberculosis
C231]
gi|308277129|gb|ADO27028.1| A/G-specific DNA glycosylase [Corynebacterium pseudotuberculosis
I19]
Length = 295
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFE 75
E I + + + + + ++++ ++S Q+ V E
Sbjct: 1 MNASEKNNIITALLRWYRANARAIIWRTPETSPWGILLSEVMSQQTPVARVEPIWAQWME 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP+ + ++ ++G R+ + + ++ D ++P +E L LPG
Sbjct: 61 KWPTPRDFAQAPKDEVLRAWGSLGYPRRALR-LHQCAQQIVAVLDGEVPADVEKLLALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQY 192
IG A + + +FG VDT++ R+ +R+ L G K + ++P +
Sbjct: 120 IGDYTARAVAAFSFGQRVAVVDTNVRRVYHRLYLGRYLAGNPSKKEIAEVQALLPEHNAP 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C P C+ C + + C
Sbjct: 180 EFSVALMELGALICTP-TPACEVCPVRSQC 208
>gi|253734444|ref|ZP_04868609.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253727597|gb|EES96326.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 345
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|253729626|ref|ZP_04863791.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726622|gb|EES95351.1| A/G-specific DNA glycosylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 345
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|118577076|ref|YP_876819.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
gi|118195597|gb|ABK78515.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
Length = 277
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 106/181 (58%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ F++++ +LSA++ D + K K LF TP+++ + ++ ++ IG YR K
Sbjct: 30 HTGPFSILIGTILSARTRDESTTKVVKELFARYKTPRELARARHRDVERIVKPIGFYRVK 89
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
S I+ ++ I+ ++ ++P LE L LPG+GRK AN +L AF P I VD H+ RIS
Sbjct: 90 SRRIMEVARIIDTKYGGRVPDDLETLVGLPGVGRKTANCVLVYAFEKPAIPVDIHVHRIS 149
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
NR+GL +TP + E +L + +P +H + + V++G+ +CK P C+ C I +LCK
Sbjct: 150 NRLGLVDTRTPEETEAALTKKVPKRHWLHVNDIFVMYGQNICKPVSPMCEVCGIRSLCKY 209
Query: 225 I 225
Sbjct: 210 Y 210
>gi|332187361|ref|ZP_08389099.1| hhH-GPD superbase excision DNA repair family protein [Sphingomonas
sp. S17]
gi|332012522|gb|EGI54589.1| hhH-GPD superbase excision DNA repair family protein [Sphingomonas
sp. S17]
Length = 354
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ +L + + + + ++ ++ Q+T V E
Sbjct: 17 ARLLAWYDRHARDLPWRAKAGETPDPYRVWLSEVMLQQTTVAAVGPRFSAWVERWPDVAS 76
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++ + +G Y ++ N++ + ++ E + P T GL LPG+G A
Sbjct: 77 LAAASDEDIMAAWAGLGYYA-RARNLVKAARAVVAEHGGRFPSTEAGLRDLPGLGAYTAA 135
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLV 199
+ ++AFG + VD ++ R+ R+ P + ++ RI P + ++
Sbjct: 136 AVAAIAFGERAVVVDANVERVVARLFAIQTPLPAARPAIREATDRITPDARAGDFAQAMM 195
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +K QC C I+ C+ +
Sbjct: 196 DLGSSICTVKKSQCLLCPIAVDCRARAE 223
>gi|329731442|gb|EGG67805.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus 21193]
Length = 345
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|255534615|ref|YP_003094986.1| A/G-specific adenine glycosylase [Flavobacteriaceae bacterium
3519-10]
gi|255340811|gb|ACU06924.1| A/G-specific adenine glycosylase [Flavobacteriaceae bacterium
3519-10]
Length = 372
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 86/218 (39%), Gaps = 12/218 (5%)
Query: 19 LYTPK---ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + K + + + + +L + + + + V ++ Q+ ++
Sbjct: 1 MTSKKQNADFLHVGENLLAWYNTHGRDLPFRKTGDPYRIWVCEIIFQQTRIAQGLNHYQN 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ ++ Y + +G Y + N+ + +I+E+ P+ + + +
Sbjct: 61 FIARFPDVHTLANAETDEVLLYWKGLGYYSRAL-NLHKAAMQIIHEYGGIFPKNYDDILK 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIP 187
L G+G+ A I S+ FG VD + +R+ +R+ N + LR++P
Sbjct: 120 LRGVGKYTAAAIASICFGAHIPAVDGNFYRVLSRVFAEDFDVSNSKAFNYFSGLALRMMP 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + ++ G VC+ R P+C+ C ++ C
Sbjct: 180 QNKAGHFNEAMMDLGSEVCRPRNPKCEICPLNADCLAF 217
>gi|229494157|ref|ZP_04387920.1| base excision DNA repair protein, HhH-GPD family [Rhodococcus
erythropolis SK121]
gi|229318519|gb|EEN84377.1| base excision DNA repair protein, HhH-GPD family [Rhodococcus
erythropolis SK121]
Length = 293
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 11/197 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++++ ++ Q+ V V + E P M A
Sbjct: 8 LLKWYSETARDLPWRREGVSAWQILMSEIMLQQTPVVRVAPIWEEWVERWPVPSAMAASS 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G R+ + + +L E + +P+ ++ L LPGIG A +
Sbjct: 68 QAEVLRAWGKLGYPRRALR-LHECAGVLAAEHGDVVPEDVDTLLSLPGIGSYTARAVACF 126
Query: 148 AFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPPKHQYN--AHYWLVLH 201
A+G VDT++ R+ R G A P+ + ++P L+
Sbjct: 127 AYGQRVPVVDTNVRRVVARAVHGNAEPGNPSNTRDLADVAALLPRTRARAATYSAALMEL 186
Query: 202 GRYVCKARKPQCQSCII 218
G +C AR P C++C +
Sbjct: 187 GALICTARTPNCENCPL 203
>gi|194397550|ref|YP_002037829.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae G54]
gi|194357217|gb|ACF55665.1| A/G-specific adenine glycosylase [Streptococcus pneumoniae G54]
Length = 391
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 87/217 (40%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + V+ ++ Q+ V +
Sbjct: 10 VMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPXHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + ++ +F + P T EG++ L
Sbjct: 70 DWFPTVESLATASEESLLKAWEGLGYYS-RVRNMQAAAQQIMTDFGGQFPXTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLR-IIPPK 189
GIG A I S+AF +P VD ++ R+ R+ K+ Q+++ +I P
Sbjct: 129 GIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPD 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 189 RPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 225
>gi|149925770|ref|ZP_01914034.1| probable a/g-specific adenine glycosylase protein [Limnobacter sp.
MED105]
gi|149825887|gb|EDM85095.1| probable a/g-specific adenine glycosylase protein [Limnobacter sp.
MED105]
Length = 377
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 7/207 (3%)
Query: 27 EIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
E+ + + + + + + ++ ++ Q+ V + T +
Sbjct: 11 EVLVRWQKQHGRQTLPWQHTGDAYKVWLSEVMLQQTQVTTVLAYYARFLQAYPTVADLAG 70
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E+ + +G Y ++ N+ + + + F + P+T+ L LPGIG+ A I
Sbjct: 71 APEQDVMQLWAGLGYYT-RARNLHACAKQVAARFGGQFPRTVAELESLPGIGQSTAGAIA 129
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLVL 200
S+A+G+ +D ++ R+ R G + +P + + L+
Sbjct: 130 SLAYGVQAPILDGNVKRVFCRYYGIEGYPEQTTIKKTLWAIAEANVPEQQPGVYNQALMD 189
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G C R P C +C + C +++
Sbjct: 190 LGATCCVPRNPACSACPLMQSCVALQK 216
>gi|223889417|ref|ZP_03624003.1| endonuclease III [Borrelia burgdorferi 64b]
gi|223885103|gb|EEF56207.1| endonuclease III [Borrelia burgdorferi 64b]
Length = 211
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANV+L + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVVLGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|216264529|ref|ZP_03436521.1| endonuclease III [Borrelia burgdorferi 156a]
gi|215981002|gb|EEC21809.1| endonuclease III [Borrelia burgdorferi 156a]
Length = 211
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVVTRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|303243595|ref|ZP_07329937.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
gi|302486156|gb|EFL49078.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
Length = 397
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ +LSA++ D ++ +K LF+ ++ I + +L+ +I +G Y+ K+++
Sbjct: 78 AFKVLISTVLSARTKDETTSEVSKRLFKRIKNIDDLVTINQSELEKHIYPVGFYKTKAKH 137
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L+ I+ N+++ KIP LE L +LPG+GRK AN+++++AF I VDTH+ RI NR
Sbjct: 138 LKELAKIVKNDYNGKIPNRLEDLIKLPGVGRKTANLVITLAFDDYGICVDTHVHRICNRW 197
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
+ PN+ E L + +P K+ + LV++GR VC P+C C I +C
Sbjct: 198 EYVDTENPNETEAELRKKLPKKYWKIINNLLVVYGREVCSPI-PKCDKCFDEIKEICPYY 256
Query: 226 KQ 227
K+
Sbjct: 257 KK 258
>gi|15924858|ref|NP_372392.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927442|ref|NP_374975.1| hypothetical protein SA1685 [Staphylococcus aureus subsp. aureus
N315]
gi|148268340|ref|YP_001247283.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus JH9]
gi|150394402|ref|YP_001317077.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus JH1]
gi|156980184|ref|YP_001442443.1| hypothetical protein SAHV_1853 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253314839|ref|ZP_04838052.1| hypothetical protein SauraC_01440 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006656|ref|ZP_05145257.2| hypothetical protein SauraM_09310 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793218|ref|ZP_05642197.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9781]
gi|258408920|ref|ZP_05681202.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9763]
gi|258421102|ref|ZP_05684032.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9719]
gi|258430053|ref|ZP_05688423.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9299]
gi|258443429|ref|ZP_05691771.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8115]
gi|258445287|ref|ZP_05693478.1| A/G-specific adenine glycosylase [Staphylococcus aureus A6300]
gi|258447851|ref|ZP_05695985.1| A/G-specific adenine glycosylase [Staphylococcus aureus A6224]
gi|258453284|ref|ZP_05701269.1| A/G-specific adenine glycosylase [Staphylococcus aureus A5937]
gi|269203505|ref|YP_003282774.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ED98]
gi|282894532|ref|ZP_06302760.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8117]
gi|282928039|ref|ZP_06335646.1| A/G-specific adenine glycosylase [Staphylococcus aureus A10102]
gi|295407245|ref|ZP_06817044.1| hypothetical protein SMAG_02418 [Staphylococcus aureus A8819]
gi|296275899|ref|ZP_06858406.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus MR1]
gi|297246228|ref|ZP_06930079.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8796]
gi|13701661|dbj|BAB42954.1| SA1685 [Staphylococcus aureus subsp. aureus N315]
gi|14247640|dbj|BAB58030.1| similar to A/G-specific adenine glycosylase [Staphylococcus aureus
subsp. aureus Mu50]
gi|147741409|gb|ABQ49707.1| A/G-specific DNA-adenine glycosylase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946854|gb|ABR52790.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus JH1]
gi|156722319|dbj|BAF78736.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257787190|gb|EEV25530.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9781]
gi|257840367|gb|EEV64829.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9763]
gi|257842916|gb|EEV67335.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9719]
gi|257849647|gb|EEV73615.1| A/G-specific adenine glycosylase [Staphylococcus aureus A9299]
gi|257851314|gb|EEV75254.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8115]
gi|257855805|gb|EEV78729.1| A/G-specific adenine glycosylase [Staphylococcus aureus A6300]
gi|257858783|gb|EEV81652.1| A/G-specific adenine glycosylase [Staphylococcus aureus A6224]
gi|257864492|gb|EEV87235.1| A/G-specific adenine glycosylase [Staphylococcus aureus A5937]
gi|262075795|gb|ACY11768.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ED98]
gi|282590103|gb|EFB95184.1| A/G-specific adenine glycosylase [Staphylococcus aureus A10102]
gi|282763019|gb|EFC03151.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8117]
gi|294967820|gb|EFG43850.1| hypothetical protein SMAG_02418 [Staphylococcus aureus A8819]
gi|297176935|gb|EFH36192.1| A/G-specific adenine glycosylase [Staphylococcus aureus A8796]
gi|312830240|emb|CBX35082.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129327|gb|EFT85321.1| hypothetical protein CGSSa03_08695 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329724781|gb|EGG61285.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus 21172]
Length = 345
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|238786237|ref|ZP_04630183.1| A/G-specific adenine glycosylase [Yersinia bercovieri ATCC 43970]
gi|238712852|gb|EEQ04918.1| A/G-specific adenine glycosylase [Yersinia bercovieri ATCC 43970]
Length = 370
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V +
Sbjct: 20 QAQQFAHAVLDWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 79
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 80 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVERHQGEFPTTFDEILALPGIGRS 138
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS+A G +D ++ R+ R G K + Q + P K
Sbjct: 139 TAGAILSLALGQHFPILDGNVKRVLARCYAVEGWPGKKEVEGRLWQISEEVTPAKGVGQF 198
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 199 NQAMMDLGAIVCTRSKPKCELCPLNIGCMAY 229
>gi|271970314|ref|YP_003344510.1| A/G-specific DNA glycosylase-like protein [Streptosporangium roseum
DSM 43021]
gi|270513489|gb|ACZ91767.1| A/G-specific DNA glycosylase-like protein [Streptosporangium roseum
DSM 43021]
Length = 291
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 10/198 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + ++++V+ ++ Q+ V V E T +
Sbjct: 13 DWYAESARDLPWRTPGASPWSILVSEIMLQQTPVVRVLPVWTEWMERWPTAAALAEEPPG 72
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + +G R+ N+ + + + + ++P L LPGIG A + S AF
Sbjct: 73 EAVRHWGRLGYPRRAL-NLHACARAITDHHGGEVPSDHATLLTLPGIGEYTAAAVASFAF 131
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP-PKHQYNAHYWLVLHGRY 204
+DT++ R+ R P + ++P ++ G
Sbjct: 132 KGRHAVLDTNVRRVLARAVRGEEYPPKATTSAERRLAESLLPGADDAPVWAVAVMELGAL 191
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR P+C C I +LC
Sbjct: 192 VCTARAPRCADCPIGDLC 209
>gi|114556227|ref|XP_513125.2| PREDICTED: mutY homolog isoform 10 [Pan troglodytes]
gi|114556229|ref|XP_001155458.1| PREDICTED: mutY homolog isoform 3 [Pan troglodytes]
Length = 429
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 5/187 (2%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T Q + + +++ +G Y +
Sbjct: 5 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 64
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ + LPG+GR A I S+AFG T VD ++ R+
Sbjct: 65 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 124
Query: 166 RIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R+ + ++ +++ P + + + G VC ++P C C + +
Sbjct: 125 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVES 184
Query: 221 LCKRIKQ 227
LC+ ++
Sbjct: 185 LCRARQR 191
>gi|317473948|ref|ZP_07933227.1| A/G-specific adenine glycosylase [Bacteroides eggerthii 1_2_48FAA]
gi|316909790|gb|EFV31465.1| A/G-specific adenine glycosylase [Bacteroides eggerthii 1_2_48FAA]
Length = 350
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 75/206 (36%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ V + + + A
Sbjct: 10 ETLLDWYADNKRDLPWRDTADPYRIWISEIILQQTRVVQGYEYFLRFIRRFPDVETLAAA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + K P + + + L G+G A I S
Sbjct: 70 SEDEVLKYWQGLGYYSRARNLHAAAKS-----MNGKFPASYQEVRALKGVGDYTAAAICS 124
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLH 201
+A+ +P VD +++R+ +R + + ++ + ++
Sbjct: 125 IAYNMPYAVVDGNVYRVLSRYWGVDTPIDSTEGKRLFAVLADEMLDKSRPAIYNQAIMDF 184
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C +++ C + +
Sbjct: 185 GAVQCTPQAPDCMFCPLADSCTALSK 210
>gi|285817548|gb|ADC38035.1| A/G-specific adenine glycosylase [Staphylococcus aureus 04-02981]
Length = 345
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|21283537|ref|NP_646625.1| hypothetical protein MW1808 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486686|ref|YP_043907.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|300913049|ref|ZP_07130487.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus TCH70]
gi|21204978|dbj|BAB95673.1| MW1808 [Staphylococcus aureus subsp. aureus MW2]
gi|49245129|emb|CAG43595.1| HhH-GPD superfamily base excision DNA repair protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|300885827|gb|EFK81034.1| A/G-specific adenine glycosylase [Staphylococcus aureus subsp.
aureus TCH70]
Length = 345
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|320105399|ref|YP_004180989.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
gi|319923920|gb|ADV80995.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
Length = 356
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +E+ S + L + ++ ++ ++ Q+ V +
Sbjct: 15 LSVEEIILFRRKLSAWYRRHARVLPWRTTVEPYSTWLSEIMLQQTRVNAVIDHFNRFLKD 74
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E + +G YR ++ + + ++ E + ++P T L RLPGI
Sbjct: 75 FPTMLALALADEDAVLAAWSGLGYYR-RARMLHRAAKFVVEEHEGELPSTAAELRRLPGI 133
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK----VEQSLLRIIPPKHQY 192
G ++ I S+AFG VD ++ R+ RI P + Q ++P +
Sbjct: 134 GEYTSSAIASIAFGECIAVVDGNVERVLLRIAGRPEDKSAAGRALITQQAQALVPARKPG 193
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ + ++ G VC R P C C + LC+
Sbjct: 194 DHNQAMMELGATVCLPRGPLCVVCPVYELCQ 224
>gi|226321443|ref|ZP_03796970.1| endonuclease III [Borrelia burgdorferi Bol26]
gi|226233239|gb|EEH31991.1| endonuclease III [Borrelia burgdorferi Bol26]
Length = 211
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|215413508|ref|ZP_03422185.1| adenine glycosylase mutY [Mycobacterium tuberculosis 94_M4241A]
gi|298527068|ref|ZP_07014477.1| adenine glycosylase mutY [Mycobacterium tuberculosis 94_M4241A]
gi|298496862|gb|EFI32156.1| adenine glycosylase mutY [Mycobacterium tuberculosis 94_M4241A]
Length = 304
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + ++ +P +E L LPG+G A +
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIP-PKHQYNAHYWLVLHG 202
A+ VDT++ R+ R A + + +L ++P L+ G
Sbjct: 140 AYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRATAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 200 ATVCTARTPRCGLCPL-DWC 218
>gi|330837763|ref|YP_004412404.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta coccoides
DSM 17374]
gi|329749666|gb|AEC03022.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta coccoides
DSM 17374]
Length = 237
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 103/178 (57%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F +++A L+S ++ D A++ LF +A+TP+ MLA+ +++++ I G +R K+
Sbjct: 52 SSPFRVLIATLISLRTKDAVTYAASRRLFSVANTPRAMLALSQEQIETAIAPAGFFRTKA 111
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
NI+ +S L+ E +P E L LPG+G K AN+ L++ FGI I VD H+ I+N
Sbjct: 112 RNILEISKKLVEEHGGLVPPDKEALVSLPGVGTKTANLTLNLGFGIDAICVDCHVHTIAN 171
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
R G K P + E+ L +I+P + + LV +G+ +C + P+C C I++ C
Sbjct: 172 RTGWVSTKNPEQTEKELEKILPRRFWIPLNELLVSYGQKICTSVSPRCSICPIASTCP 229
>gi|257452141|ref|ZP_05617440.1| A/G-specific adenine glycosylase [Fusobacterium sp. 3_1_5R]
Length = 355
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+I + K +L + + ++ ++ Q+ V E + +
Sbjct: 3 KIAKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFARFIEELPNIEAL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E+KL + +G Y ++ N+ + ++ + ++P+ + L L GIG A
Sbjct: 63 ANCEEEKLMKLWQGLGYYS-RARNLKKAACQIMEMYGGELPKEKKELLHLAGIGPYTAGA 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWL 198
I S+A+G VD ++ R+ +R+ G K+E+ + +P + + L
Sbjct: 122 ISSIAYGKKETAVDGNVIRVMSRLFAVEGNVLEGKGRQKIEELTYQELPEDRAGDFNQAL 181
Query: 199 VLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ G +C C C + C+
Sbjct: 182 MDLGATICIPNGAALCHLCPLHLECQA 208
>gi|162447569|ref|YP_001620701.1| A/G-specific adenine DNA glycosylase [Acholeplasma laidlawii PG-8A]
gi|161985676|gb|ABX81325.1| A/G-specific adenine DNA glycosylase [Acholeplasma laidlawii PG-8A]
Length = 334
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + K +L + N + + V+ ++ Q+ + I T Q +
Sbjct: 3 YLRLFDWYQTNKRDLPFRKTDNPYHIWVSEIMLQQTQVDTMLPFYDRFLTIYPTIQDLAR 62
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ ++ IG YR + + + +I+ D K+P+ + ++PGIG A I+
Sbjct: 63 ADIDEILKVVQGIGYYR-RFRMLHKGAQYVIDHHDGKLPEDYFKILKIPGIGAYTAGAIM 121
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK------HQYNAHYWLV 199
S+AF P D ++ R+ +R+ + + L + + + Y ++
Sbjct: 122 SIAFHKPYPATDGNVIRVLSRVKMLEDDFRLDKNKKKLNEMNKELIENSNNPYLYTQSMM 181
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VCK P C +C + +C
Sbjct: 182 ELGATVCKVSNPLCDTCPLQEVC 204
>gi|238752332|ref|ZP_04613811.1| A/G-specific adenine glycosylase [Yersinia rohdei ATCC 43380]
gi|238709493|gb|EEQ01732.1| A/G-specific adenine glycosylase [Yersinia rohdei ATCC 43380]
Length = 348
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 85/211 (40%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFAHVVLEWYHRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + +++ + P T + + LPGIGR
Sbjct: 63 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQMVVELHQGEFPTTFDEILALPGIGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A ILS++ G +D ++ R+ R G +VE L +I P K
Sbjct: 122 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKEVESRLWQISEDVTPAKGVGQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 182 NQAMMDLGAIVCTRSKPKCELCPLNIGCLAY 212
>gi|167772898|ref|ZP_02444951.1| hypothetical protein ANACOL_04286 [Anaerotruncus colihominis DSM
17241]
gi|167664831|gb|EDS08961.1| hypothetical protein ANACOL_04286 [Anaerotruncus colihominis DSM
17241]
Length = 349
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
LE+I + +L + + + ++ ++ Q+ V + +
Sbjct: 3 RLEQIVEPLLAWYEKNARDLPWRHGVTPYRVWISEIMLQQTRVEAVKGYFERFMQALPDV 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + ++ EK+L +G Y ++ N+ + +++ + +P++ + L +LPGIG
Sbjct: 63 ESLSSVEEKRLLKLWEGLGYYS-RARNLKRAAALIMERYGGALPRSCDELLKLPGIGPYT 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
A I S+A+G+ VD ++ R+ +A E+ L +IP +
Sbjct: 122 AGAIASIAYGLAEPAVDGNVLRVLTRLEDDHSDIADAAVKRAAEKKLRAVIPQGRAGAFN 181
Query: 196 YWLVLHGRYVCKARK-PQCQSCIISNLCKRI 225
++ G +C P+C C + LC
Sbjct: 182 SAMMELGATICGPNGPPECLCCPLRPLCIGY 212
>gi|19553867|ref|NP_601869.1| A/G-specific DNA glycosylase [Corynebacterium glutamicum ATCC
13032]
gi|62391508|ref|YP_226910.1| A/G-specific adenine glycosylase [Corynebacterium glutamicum ATCC
13032]
gi|21325443|dbj|BAC00065.1| A/G-specific DNA glycosylase [Corynebacterium glutamicum ATCC
13032]
gi|41326850|emb|CAF20694.1| A/G-SPECIFIC ADENINE GLYCOSYLASE [Corynebacterium glutamicum ATCC
13032]
Length = 293
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + + ++++ ++S Q+ V + E TP+
Sbjct: 10 LLVWFRANARDLAWRDPNTSAWGILLSEVMSQQTPVARVEPIWREWMEKWPTPEDFANAS 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G R+ + + +++ + ++P T+E L LPGIG A + +
Sbjct: 70 TDEILRSWGKLGYPRRALR-LKECAEVIVEKHAGEVPDTVEALLALPGIGDYTARAVAAF 128
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR---IIPPKHQYNAHYWLVLHGRY 204
FG VDT++ R+ R +Q L+ ++P H ++ G
Sbjct: 129 HFGQRVPVVDTNVRRVYQRAVAGRYLAGPAKKQELIDVSLLLPNTHAPEFSAAIMELGAL 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
+C A P+C +C + + C+ K
Sbjct: 189 ICTATSPKCDTCPLLDQCQWQK 210
>gi|110835146|ref|YP_694005.1| A/G specific adenine glycosylase [Alcanivorax borkumensis SK2]
gi|110648257|emb|CAL17733.1| A/G specific adenine glycosylase [Alcanivorax borkumensis SK2]
Length = 358
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 10/208 (4%)
Query: 26 EEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + + ++ ++ Q+ V + E +
Sbjct: 9 EHFSQALLDWYDQHGRQDLPWQHPRTPYQVWISEIMLQQTQVNTVIPYFQRFMEHFPDVK 68
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + ++ + +G Y ++ N+ + L+ + P T+E + LPGIG A
Sbjct: 69 TLALAKQDEVLHLWTGLGYYA-RARNLHKCAQQLLENYAGDFPNTVEEVATLPGIGPSTA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHY 196
IL+ + GI +D ++ R+ R+ PG K VE L + P +
Sbjct: 128 GAILAQSRGIRAPILDGNVKRVLARLHAVPGWPGKKPVESRLWELAEHYTPDHRLADYTQ 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C+ P C +C + C+
Sbjct: 188 AIMDLGATLCRRSTPDCTACPVKTGCQA 215
>gi|91794049|ref|YP_563700.1| A/G-specific adenine glycosylase [Shewanella denitrificans OS217]
gi|91716051|gb|ABE55977.1| A/G-specific DNA-adenine glycosylase [Shewanella denitrificans
OS217]
Length = 357
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 81/205 (39%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + +++ V+ ++ Q+ V + +
Sbjct: 9 ERIVAWYDVHGRKTLPWQLNKTPYSVWVSEIMLQQTQVATVIGYYQKFMARFPDILTLAN 68
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ ++ +G Y ++ N+ + I+ + + P+ +E + LPGIG A IL
Sbjct: 69 APQDEVLHFWTGLGYYA-RARNLQKAAQIIRDNHQGRFPEDIEQVLALPGIGLSTAGAIL 127
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRII----PPKHQYNAHYWLVL 200
S++ +D ++ R+ R G G KV E L + P + ++
Sbjct: 128 SLSLQQHHPILDGNVKRVLARHGAIEGWPGQKVVENRLWEMTKLKTPKSEVAKYNQAMMD 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G +C KPQC+ C +S+ C+
Sbjct: 188 LGASLCSRSKPQCELCPVSDDCQAF 212
>gi|148264846|ref|YP_001231552.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
gi|146398346|gb|ABQ26979.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
Length = 218
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHL 73
E+ + + + + + F ++V+ +LS ++ D A++ L
Sbjct: 1 MKDGEIRDAMAILAEAVKKWRTPAVTIVSQREGDPFKVLVSCILSLRTQDKTTAAASERL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A TP + + + ++ I +G YR K+ I +S ++ ++ ++P ++ L
Sbjct: 61 FALAGTPSDLGTLPTETIEKAIYPVGFYRVKAAQIKDISRLIQEKYAGRVPDEIDELLTF 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN+++++ +G P I VDTH+ RI NR G KTP + E +L +P +
Sbjct: 121 KGVGRKTANLVVTLGYGKPGICVDTHVHRICNRWGYVQTKTPEQTEFALRGKLPRDYWLV 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+ C P C +C ++ +C R+
Sbjct: 181 INDLLVTFGQNQCLPVSPLCSTCPLAKMCDRV 212
>gi|54022393|ref|YP_116635.1| putative A/G-specific adenine glycosylase [Nocardia farcinica IFM
10152]
gi|54013901|dbj|BAD55271.1| putative A/G-specific adenine glycosylase [Nocardia farcinica IFM
10152]
Length = 295
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 10/199 (5%)
Query: 29 FYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + +L + + ++++ ++ Q+ V P M
Sbjct: 9 HDALLDWYAAAARDLPWRRPGVTAWQILMSEIMLQQTPVARVQPIWLEWVRRWPVPSAMA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A + ++ +G R+ + + +L E +++P ++ L LPGIG A +
Sbjct: 69 ASSQAEVLRAWGKLGYPRRALR-LHECAGVLAAEHGDEVPADVDVLLGLPGIGAYTARAV 127
Query: 145 LSMAFGIPTIGVDTHIFRISN---RIGLAPGKTPNKVEQSLLRIIPP--KHQYNAHYWLV 199
A+GI VDT++ R+ G + ++P + L+
Sbjct: 128 ACFAYGIRVPVVDTNVRRVVARAVHGRAEAGNPSARDLAETEALLPAQVEPAARFSAALM 187
Query: 200 LHGRYVCKARKPQCQSCII 218
G VC AR P C C +
Sbjct: 188 ELGATVCTARNPDCGRCPL 206
>gi|254422830|ref|ZP_05036548.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
gi|196190319|gb|EDX85283.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
Length = 216
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 19 LYTPKELEEIFYLFSLK---WPSPK----GELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ + ++E F +P E Y + F +V+ ++S ++ D ++
Sbjct: 1 MNSTFDIEMAFSRLREAMRAYPKAAMFQLAEEGYRSAFEQLVSCIISVRTYDEVSLPVSR 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
LF+ A+TPQ M + +++ IR +K+ I ++ ++N +D +P + L
Sbjct: 61 QLFKRANTPQAMSELSVAEIEALIRRSTYAERKAHQIWVIAQEIVNHYDGILPCDVNTLL 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
G+G K A++ L +A P I VD H+ R+ NR G KTP K Q+L +P
Sbjct: 121 AFKGVGPKCAHLTLGIACEQPYISVDVHVHRVVNRWGYVATKTPEKTTQALAAKLPKGLW 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ G+ +CK + P C C + + C R+
Sbjct: 181 IETNKLLMPFGKQICKGQYPLCTQCPLEDSCPRV 214
>gi|195941563|ref|ZP_03086945.1| endonuclease III (nth) [Borrelia burgdorferi 80a]
gi|312148231|gb|ADQ30890.1| endonuclease III [Borrelia burgdorferi JD1]
gi|312149184|gb|ADQ29255.1| endonuclease III [Borrelia burgdorferi N40]
Length = 211
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 20 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 79
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 80 IYKAGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 140 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 199
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 200 NCFLEKFAPRV 210
>gi|319745679|gb|EFV97978.1| A/G-specific adenine glycosylase [Streptococcus agalactiae ATCC
13813]
Length = 384
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWPEDRIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|260584900|ref|ZP_05852644.1| A/G-specific adenine glycosylase [Granulicatella elegans ATCC
700633]
gi|260157330|gb|EEW92402.1| A/G-specific adenine glycosylase [Granulicatella elegans ATCC
700633]
Length = 393
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 83/212 (39%), Gaps = 9/212 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+++ +++ + K +L + N + + V+ ++ Q+ V
Sbjct: 9 KMWSEEKITSFQEKLLAWYDKEKRDLPWRHSNNPYHIWVSEIMLQQTRVDTVIPYYYRFL 68
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E T + + E++L +G Y + N+ + ++ E++ K P T+E + L
Sbjct: 69 ETFPTIESLANAQEEELLKVWEGLGYYS-RVRNMQKAAQQIMEEYNGKFPDTMEEIQTLK 127
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF +P VD ++ R+ +R+ + + +II +
Sbjct: 128 GIGPYTAGAIASIAFNLPEPAVDGNLMRVISRLFEIGLDIGNPSNRKVFQAVAEKIISKE 187
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 188 RPGDFNQALMDLGSDIESPVTPHPEDSPVKEF 219
>gi|114556219|ref|XP_001155827.1| PREDICTED: mutY homolog isoform 9 [Pan troglodytes]
Length = 520
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 17/212 (8%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 72 LLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQW-PTL 130
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +++ +G Y + ++ + LPG+GR
Sbjct: 131 QDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYT 190
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAH 195
A I S+AFG T VD ++ R+ R+ + ++ +++ P + +
Sbjct: 191 AGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFN 250
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC ++P C C + +LC+ ++
Sbjct: 251 QAAMELGATVCTPQRPLCSQCPVESLCRARQR 282
>gi|146309273|ref|YP_001189738.1| A/G-specific DNA-adenine glycosylase [Pseudomonas mendocina ymp]
gi|145577474|gb|ABP87006.1| A/G-specific DNA-adenine glycosylase [Pseudomonas mendocina ymp]
Length = 355
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 13/214 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+P++ + + +L + + + V+ ++ Q+ V
Sbjct: 1 MSPEQFN---SAVLAWYDQHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMA 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E ++ + +G Y ++ N+ + I++ E + P+++E L LPG
Sbjct: 58 ALPTVKDLAEAPEDEVLHLWTGLGYYT-RARNLQKSAQIIMREHGGEFPRSVEALAELPG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKH 190
IGR A I S++ G+ +D ++ R+ R G ++ R+ P +
Sbjct: 117 IGRSTAGAIASLSMGVRAPILDGNVKRVLARYVAQEGYPGEPKVAKQLWDIAERLTPHER 176
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C KP C C + + C+
Sbjct: 177 VGHYTQAMMDLGATLCTRSKPTCLLCPVRSGCQA 210
>gi|48477970|ref|YP_023676.1| endonuclease III [Picrophilus torridus DSM 9790]
gi|48430618|gb|AAT43483.1| endonuclease III [Picrophilus torridus DSM 9790]
Length = 215
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 2/205 (0%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
K+ I+ ++ P + + F +++ +LS ++ D + + + L+
Sbjct: 2 KDFVSIYKKIKMQAPEHH--FEFRDPFWVLITTILSQRTKDNVTDASARALYNRYHDAAG 59
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + ++ I+ +G KS+ +I + ++ ++ +P T E L ++ G+G K AN
Sbjct: 60 LAMAKPEDVKKIIKNVGFSNVKSKRVIDAAKYILKNYNGNVPDTYEELMKIKGVGTKTAN 119
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
++L+ +F P I VDTH+ RI NRIG +TP + E L +IIP ++Q + LV G
Sbjct: 120 IVLTQSFNKPAIPVDTHVHRIVNRIGFVNTRTPEETETELKKIIPLEYQIEFNPVLVEFG 179
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+ +CK P+C C++ + C +
Sbjct: 180 KNICKPVSPKCDMCLVRDCCDYYSR 204
>gi|86134966|ref|ZP_01053548.1| HhH-GPD superfamily base excision DNA repair protein [Polaribacter
sp. MED152]
gi|85821829|gb|EAQ42976.1| HhH-GPD superfamily base excision DNA repair protein [Polaribacter
sp. MED152]
Length = 347
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 84/209 (40%), Gaps = 9/209 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + K +L + N + + ++ ++ Q+ + T +
Sbjct: 2 KFSNTLIFWYLQNKRDLPWRKTKNPYFIWLSEIMLQQTRVAQGLDYYQKFTTNFPTVFDL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E + + +G Y ++ N+ + ++++F+ + P T + + +L G+G A+
Sbjct: 62 ANADESTVLKMWQGLGYYS-RARNLHFSAKQIVSDFNGEFPSTFKDIIKLKGVGDYTASA 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWL 198
I S+AF PT VD +++R+ +R + ++ +I + +
Sbjct: 121 IASIAFNEPTAVVDGNVYRVLSRYFGINTPINSSKGIKEFKELAQSLIDKSQPGTFNQAI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G CK +KP C C S C +++
Sbjct: 181 MDFGAIQCKPKKPFCMFCPFSESCVALQK 209
>gi|52424372|ref|YP_087509.1| MutY protein [Mannheimia succiniciproducens MBEL55E]
gi|52306424|gb|AAU36924.1| MutY protein [Mannheimia succiniciproducens MBEL55E]
Length = 378
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + T + ++ + +G Y ++
Sbjct: 33 KTFYQVWLSEVMLQQTQVSTVIPYFERFIDAFPTINVLADAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P + + L G+GR A ILS P +D ++ R+ +
Sbjct: 92 RNLHKAAQTVRDQYGGEFPTDFQQVWDLTGVGRSTAGAILSSVLNAPYPILDGNVKRVLS 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K E L R+ P + + + ++ G VC KP+C C +S
Sbjct: 152 RYFTVEGWAGEKKTENRLWRLSAEVTPTERAADFNQAMMDLGAMVCTRTKPKCGLCPLSK 211
Query: 221 LC 222
C
Sbjct: 212 KC 213
>gi|227513387|ref|ZP_03943436.1| A/G-specific adenine glycosylase [Lactobacillus buchneri ATCC
11577]
gi|227083260|gb|EEI18572.1| A/G-specific adenine glycosylase [Lactobacillus buchneri ATCC
11577]
Length = 370
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+TP+++ + + K L + + + + ++ ++ Q+ V + ++
Sbjct: 4 WTPEKIVAFQETLLKWYDNNKRNLPWRRDHDPYHIWISEIMLQQTQVQTVIPYYERFMKL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + E L +G Y ++ N+ + ++N+++ + P T++ L L GI
Sbjct: 64 FPTVQALANADEAILMKVWEGLGYYS-RARNLQKAAQQIVNDYNGQWPTTVKELQELSGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + R+ R+ +A +T E + +++P
Sbjct: 123 GPYTAGAIASIAFNKPVPAVDGNALRVFARLLEINEDIAKPQTRKLFENIIKKLMPKNRP 182
Query: 192 YNAHYWLVLHGRYVCKARK 210
+ + ++ G A+
Sbjct: 183 GDFNQAIMDLGASYMSAKN 201
>gi|242371821|ref|ZP_04817395.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
M23864:W1]
gi|242350474|gb|EES42075.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
M23864:W1]
Length = 347
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 80/201 (39%), Gaps = 8/201 (3%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + N + + ++ ++ Q+ V T + E +
Sbjct: 13 DWFEKNQRDLPWRETTNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTVASLSEAHEDE 72
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ Y +G Y ++ N + + ++D ++P E +L G+G ++S+AF
Sbjct: 73 VLKYWEGLGYYS-RARNFHTAIKEVEAQYDGEVPSEPELFKKLKGVGPYTQAAVMSIAFD 131
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP---KHQYNAHYWLVLHGRYVC 206
P VD ++FR+ +R+ T + ++ + + P + + ++ G +C
Sbjct: 132 QPLATVDGNVFRVWSRLNNDYRDTKLQSTRKAFEQELNPYVQEASGTFNQAMMELGALIC 191
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+ P C C + C+ +
Sbjct: 192 TPKSPLCLFCPVQENCEAFHE 212
>gi|77409448|ref|ZP_00786142.1| A/G-specific adenine glycosylase [Streptococcus agalactiae COH1]
gi|77171940|gb|EAO75115.1| A/G-specific adenine glycosylase [Streptococcus agalactiae COH1]
Length = 374
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWPEDRIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|148980497|ref|ZP_01816094.1| A/G-specific adenine glycosylase [Vibrionales bacterium SWAT-3]
gi|145961222|gb|EDK26536.1| A/G-specific adenine glycosylase [Vibrionales bacterium SWAT-3]
Length = 351
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 10/202 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + EL + +T+ ++ ++ Q+ V + E + +
Sbjct: 10 KWYDAYGRKELPWQQNKTAYTVWLSEIMLQQTQVTTVIPYYQRFLERFPKVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ ++ + P ++E + LPGIGR A +LS
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKIVAEQYGGEFPLSIEEMNALPGIGRSTAAAVLSSVH 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
+P +D ++ R R G KVE L P K + ++ G
Sbjct: 129 KLPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWEHAEAHTPKKDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC KP+C C I ++C+ K
Sbjct: 189 VCTRSKPKCTLCPIESMCEAKK 210
>gi|157372277|ref|YP_001480266.1| adenine DNA glycosylase [Serratia proteamaculans 568]
gi|157324041|gb|ABV43138.1| A/G-specific adenine glycosylase [Serratia proteamaculans 568]
Length = 381
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 7/214 (3%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ ++ + ++ + + ++ ++ Q+ V +
Sbjct: 15 LMMQAQQFAQVVLDWYQRYGRKTLPWQLDKTAYKVWLSEVMLQQTQVATVIPYFERFMAR 74
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + ++ + +G Y ++ N+ + ++ + + P T E + LPGI
Sbjct: 75 FPNVRALAEAPLDEVLHLWTGLGYYA-RARNLHKAAQTIVAQHGGEFPTTFEEIHALPGI 133
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQ 191
GR A +LS+A G +D ++ R+ R G +VE L +I P +
Sbjct: 134 GRSTAGAVLSLALGQHYPILDGNVKRVLARCYAVEGWPGKKEVENRLWQISEDVTPAQGV 193
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 194 GQFNQAMMDLGAMVCTRSKPKCELCPLNLGCIAY 227
>gi|298695136|gb|ADI98358.1| probable A/G-specific adenine glycosylase DNA repair protein
[Staphylococcus aureus subsp. aureus ED133]
Length = 345
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 79/205 (38%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFIALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTESGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C +
Sbjct: 188 ALICTPKNPLCLFCPVQENCVAFDK 212
>gi|329948296|ref|ZP_08295140.1| putative A/G-specific adenine glycosylase [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328522820|gb|EGF49928.1| putative A/G-specific adenine glycosylase [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 335
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ ++S Q+ V A + P ++
Sbjct: 42 AWYDAHARDLPWRRPGTTPWEVLVSEVMSQQTPVARVVPAWREWMRRWPGPTELARAPIA 101
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ I + ++ + D +P L+ L LPG+G A +L+ A
Sbjct: 102 EVLRVWGRLGYPRRALRLI-ECARSVVEQHDGVLPDDLDALLALPGVGEYTAGAVLAFAH 160
Query: 150 GIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSL-LRIIPPKHQYNAHY--WLVLHGR 203
G + +DT++ R+ R P + N+ E+ L ++P AH+ ++ G
Sbjct: 161 GRRALVLDTNVRRVLARAVAGQALPAPSLNRTERERALHLLPDDDSTAAHWSVAVMELGA 220
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR+P C C C
Sbjct: 221 LVCTAREPNCGVCPWEVSC 239
>gi|165976307|ref|YP_001651900.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|165876408|gb|ABY69456.1| endonuclease III [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 199
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 117/178 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI + P P EL Y N F L++AV+LSAQ+TD VNKAT LF +A+T
Sbjct: 1 MNQAKRIEILTRLRNENPHPTTELNYSNPFELLIAVILSAQATDKGVNKATDKLFPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L+ YI+TIG++ K+ENII LI + + ++P+ E L L G+GRK
Sbjct: 61 PQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
ANV+L+ AFG PTI VDTHIFR+SNR G APGK KVE+ LL+++P + + + H+W
Sbjct: 121 TANVVLNTAFGHPTIAVDTHIFRVSNRTGFAPGKDVVKVEEKLLKVVPAEFKVDVHHW 178
>gi|251790786|ref|YP_003005507.1| adenine DNA glycosylase [Dickeya zeae Ech1591]
gi|247539407|gb|ACT08028.1| A/G-specific adenine glycosylase [Dickeya zeae Ech1591]
Length = 361
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 7/198 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + ++ ++ Q+ V + T ++ A +
Sbjct: 16 ERYGRKTLPWQLEKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVSELAAAPLDDVL 75
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++N P + + LPG+GR A ILS++ G
Sbjct: 76 HLWTGLGYYA-RARNLHKAAQTIVNRHGGDFPTRFDDIVDLPGVGRSTAGAILSLSLGQH 134
Query: 153 TIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ R G +VE+ L + P + + ++ G VC
Sbjct: 135 YPILDGNVKRVLARCYAVAGWPGKKEVEKQLWALSETVTPARGVEKFNQAMMDLGAMVCT 194
Query: 208 ARKPQCQSCIISNLCKRI 225
+P+C+ C +SN C
Sbjct: 195 RSRPKCELCPLSNGCIAY 212
>gi|300723984|ref|YP_003713298.1| adenine DNA glycosylase [Xenorhabdus nematophila ATCC 19061]
gi|297630515|emb|CBJ91180.1| adenine DNA glycosylase [Xenorhabdus nematophila ATCC 19061]
Length = 346
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ ++ + ++ + + ++ ++ Q+ V +
Sbjct: 1 MMEAEQFSQVVLEWYHRYGRKTLPWQLEKTSYHVWLSEVMLQQTQVATVIPYFQKFISRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + +G Y ++ N+ + ++ + K P T + + LPG+G
Sbjct: 61 PDVASLATAPLDEVLHLWTGLGYYA-RARNLHKAAQQIVTLHNGKFPTTFDDVVALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQY 192
R A ILS++ G +D ++ R+ R G +VE L R+ P +
Sbjct: 120 RSTAGAILSLSQGKHFPILDGNVKRVLARCYAVAGWPGKKEVENQLWDISTRVTPGQGVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 YFNQAMMDLGAMVCTRSKPKCEICPLNTGCIAY 212
>gi|238759337|ref|ZP_04620503.1| A/G-specific adenine glycosylase [Yersinia aldovae ATCC 35236]
gi|238702498|gb|EEP95049.1| A/G-specific adenine glycosylase [Yersinia aldovae ATCC 35236]
Length = 252
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 84/211 (39%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 3 QAQQFAHMVLEWYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 63 IRALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVECHQGEFPTTFDEILALPGIGRS 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A ILS++ G +D ++ R+ R G +VE L +I P K
Sbjct: 122 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKEVESRLWQISEDVTPAKGVGQF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 182 NQAMMDLGAIVCTRSKPKCELCPLNTGCMAY 212
>gi|118466018|ref|YP_879844.1| A/G-specific adenine glycosylase [Mycobacterium avium 104]
gi|118167305|gb|ABK68202.1| putative A/G-specific adenine glycosylase [Mycobacterium avium 104]
Length = 303
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V TP A
Sbjct: 21 LLEWYRVARRDLPWRAPGVSAWQILVSEFMLQQTPVSRVLPIWPDWVRRWPTPSATAAAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + + +P+ ++ L LPG+G A +
Sbjct: 81 AADVLRAWGKLGY-PRRAKRLHECATVIARDHGDVVPRDIDTLLTLPGVGGYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKHQY-NAHYWLVLHG 202
A+ P VDT++ R+ R A + + + ++P L+ G
Sbjct: 140 AYRRPVPVVDTNVRRVVARAVHGQADAGAPSAGRDHADVAALLPGDGSAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 200 ATVCTARAPRCGLCPLRR-C 218
>gi|322391841|ref|ZP_08065306.1| A/G-specific adenine glycosylase [Streptococcus peroris ATCC
700780]
gi|321145321|gb|EFX40717.1| A/G-specific adenine glycosylase [Streptococcus peroris ATCC
700780]
Length = 386
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ +++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 10 SMWEEEKILLFRQKLLTWYDENKRDLPWRRSRNPYHIWVSEIMLQQTRVDTVIPYYERFL 69
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E T + + E++L +G Y + N+ + + +++EF+ + P T EG++ L
Sbjct: 70 EWFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQTAAQQVMHEFNGEFPTTYEGISSLK 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF + VD ++ R+ + + + +I P+
Sbjct: 129 GIGPYTAGAISSIAFNLLQPAVDGNVMRVLARLFEVNYDIGNPSNRKIFQAMMEILIDPE 188
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + +
Sbjct: 189 RPGDFNQALMDLGSDIEAPVNPRPEDSPVKEFSAAYQ 225
>gi|76787082|ref|YP_330324.1| A/G-specific adenine glycosylase [Streptococcus agalactiae A909]
gi|76562139|gb|ABA44723.1| A/G-specific adenine glycosylase [Streptococcus agalactiae A909]
Length = 374
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWPEDRIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|330832875|ref|YP_004401700.1| A/G-specific adenine glycosylase [Streptococcus suis ST3]
gi|329307098|gb|AEB81514.1| A/G-specific adenine glycosylase [Streptococcus suis ST3]
Length = 386
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++++ + + K +L + + + + V+ ++ Q+ V +
Sbjct: 11 MWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLH 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ + +G Y + N+ + ++ +FD + P T ++ L G
Sbjct: 71 YLPTISDLAQAPEEVILKLWEGLGYYS-RVRNMQKAAQQMVEDFDGQFPTTHAAISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRI-IPPKH 190
IG A I S+AF +P VD ++ R+ +R+ K+ Q+++ + I P+
Sbjct: 130 IGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ Q +
Sbjct: 190 PGDFNQALMDLGSDIESPVNPRPQDSPVKAF 220
>gi|25011799|ref|NP_736194.1| A/G-specific adenine glycosylase [Streptococcus agalactiae NEM316]
gi|77413687|ref|ZP_00789871.1| A/G-specific adenine glycosylase [Streptococcus agalactiae 515]
gi|24413340|emb|CAD47419.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160287|gb|EAO71414.1| A/G-specific adenine glycosylase [Streptococcus agalactiae 515]
Length = 374
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWPEDRIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|116071694|ref|ZP_01468962.1| Mutator MutT [Synechococcus sp. BL107]
gi|116065317|gb|EAU71075.1| Mutator MutT [Synechococcus sp. BL107]
Length = 384
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 12/195 (6%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
WP P+ L + + + +A ++ Q+ V + T ++++
Sbjct: 39 TWPLPEDNL---SSYGIWIAEVMLQQTQLSVVLPYWQRWMARFPTVDAFATSSLEQVRLQ 95
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ +G Y + + ++ + P+ L+G LPG+GR A I+S AF P
Sbjct: 96 WQGLGYYSRARRLHEAARVLVQQPW----PKDLDGWMALPGVGRTTAGGIVSSAFNAPAP 151
Query: 155 GVDTHIFRISNRIGLAPGKTPNK----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+D ++ R+ R+ G+ P++ + ++ + + + L+ G VC R+
Sbjct: 152 ILDGNVKRVLARLH-THGRPPSRDQHLFWRWSEELLDLRRPRDFNQALMDLGATVCTPRR 210
Query: 211 PQCQSCIISNLCKRI 225
P C C C
Sbjct: 211 PGCDQCPWRASCAAY 225
>gi|145222030|ref|YP_001132708.1| HhH-GPD family protein [Mycobacterium gilvum PYR-GCK]
gi|145214516|gb|ABP43920.1| HhH-GPD family protein [Mycobacterium gilvum PYR-GCK]
Length = 291
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 10/199 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++V+ + Q+ V TP A
Sbjct: 7 LIRWYGTAQRDLAWRRPGVSAWQILVSEFMLQQTPVARVEPIWLDWVSRWPTPSATAAAS 66
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ E + +P ++ L LPG+G A +
Sbjct: 67 AADILRAWGKLGY-PRRAKRLHECATVIATEHGDVVPDDVDTLVTLPGVGTYTARAVACF 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVE--QSLLRIIPPKH-QYNAHYWLVLHGR 203
A+ VDT++ R+ R P + ++P + ++ G
Sbjct: 126 AYRQRVPVVDTNVRRVVARAVHGLHDAGPPSTRDLADVAALLPDDDTAPHFSIAVMELGA 185
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 186 TVCTARAPRCGVCPL-THC 203
>gi|41406567|ref|NP_959403.1| MutY [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394916|gb|AAS02786.1| MutY [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 303
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V TP A
Sbjct: 21 LLEWYRVARRDLPWRAPGVSAWQILVSEFMLQQTPVSRVLPIWPDWVRRWPTPSATAAAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + + +P ++ L LPG+G A +
Sbjct: 81 AADVLRAWGKLGY-PRRAKRLHECATVIARDHGDVVPDDVDTLLTLPGVGGYTARAVACF 139
Query: 148 AFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKHQY-NAHYWLVLHG 202
A+ P VDT++ R+ R A + + + ++P L+ G
Sbjct: 140 AYRRPVPVVDTNVRRVVARAVHGQADAGAPSAGRDHADVAALLPGDGSAPEFSVALMELG 199
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 200 ATVCTARAPRCGLCPLRR-C 218
>gi|227524529|ref|ZP_03954578.1| A/G-specific adenine glycosylase [Lactobacillus hilgardii ATCC
8290]
gi|227088301|gb|EEI23613.1| A/G-specific adenine glycosylase [Lactobacillus hilgardii ATCC
8290]
Length = 370
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+TP+++ + + K L + + + + ++ ++ Q+ V + ++
Sbjct: 4 WTPEKIVAFQETLLKWYDNNKRNLPWRRDHDPYHIWISEIMLQQTQVQTVIPYYERFMKL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + E L +G Y ++ N+ + ++N+++ + P T++ L L GI
Sbjct: 64 FPTVQALANADEAILMKVWEGLGYYS-RARNLQKAAQQIVNDYNGQWPTTVKELQELSGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + R+ R+ +A +T E + +++P
Sbjct: 123 GPYTAGAIASIAFNKPVPAVDGNALRVFARLLEINEDIAKPQTRKLFENIIKKLMPKNRP 182
Query: 192 YNAHYWLVLHGRYVCKARK 210
+ + ++ G A+
Sbjct: 183 GDFNQAIMDLGASYMSAKN 201
>gi|15675660|ref|NP_269834.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
M1 GAS]
gi|13622873|gb|AAK34555.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
M1 GAS]
Length = 374
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWDNETIASFRRTLLEWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|302023840|ref|ZP_07249051.1| A/G-specific adenine glycosylase [Streptococcus suis 05HAS68]
Length = 376
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++++ + + K +L + + + + V+ ++ Q+ V +
Sbjct: 1 MWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLH 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ + +G Y + N+ + ++ +FD + P T ++ L G
Sbjct: 61 YLPTISDLAQAPEEVILKLWEGLGYYS-RVRNMQKAAQQMVEDFDGQFPTTHAAISSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRI-IPPKH 190
IG A I S+AF +P VD ++ R+ +R+ K+ Q+++ + I P+
Sbjct: 120 IGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDPER 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ Q +
Sbjct: 180 PGDFNQALMDLGSDIESPVNPRPQDSPVKAF 210
>gi|189463293|ref|ZP_03012078.1| hypothetical protein BACCOP_04010 [Bacteroides coprocola DSM 17136]
gi|189430023|gb|EDU99007.1| hypothetical protein BACCOP_04010 [Bacteroides coprocola DSM 17136]
Length = 375
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 11/206 (5%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + N + + ++ ++ Q+ E Q +
Sbjct: 29 DKIINWYKENKRDLPWRNTKNPYKIWISEIILQQTRVAQGYDYYCRFIERFPDFQTLADA 88
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + I P T G+ ++ G+G A I S
Sbjct: 89 DEDEVMKYWQGLGYYSRARNLHEAARSIAREGA---FPDTYAGVRKMKGVGDYTAAAICS 145
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R + ++ + ++
Sbjct: 146 FAYDMPCAVVDGNVYRVISRWMGVEEPIDTNSGKKLFAELADELLDKAQPALYNQAIMDF 205
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C P C C +S+ C +++
Sbjct: 206 GALQCVPSSPSCLFCPLSDSCVALQK 231
>gi|300790508|ref|YP_003770799.1| A/G-specific adenine glycosylase [Amycolatopsis mediterranei U32]
gi|299800022|gb|ADJ50397.1| A/G-specific adenine glycosylase [Amycolatopsis mediterranei U32]
Length = 291
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + +L + + ++V+ ++ Q+ V V P + A
Sbjct: 6 DVLLDWFSAHGRDLPWREPTCSAWGVLVSEIMLQQTPVVRVQPIWLEWMARWPVPSALAA 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ +G R+ + I D +P ++ L LPGIG A +
Sbjct: 66 SSQGEVVRAWGKLGYPRRALRLHEAAGVIAKEHGDV-VPSDVDTLLALPGIGAYTARAVA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGL----APGKTPNKVEQSLLRIIPPKHQ--YNAHYWLV 199
+ A+G VDT++ R+ R A + + + ++P + ++
Sbjct: 125 AFAYGRRAPVVDTNVRRVVARAVHGAGDAGPASNTRDMADVEALLPAEDAPAARFSAAIM 184
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C AR P+C C I + C
Sbjct: 185 ELGALICTARAPKCADCPIYDEC 207
>gi|251793319|ref|YP_003008047.1| A/G-specific adenine glycosylase [Aggregatibacter aphrophilus
NJ8700]
gi|247534714|gb|ACS97960.1| A/G-specific adenine glycosylase [Aggregatibacter aphrophilus
NJ8700]
Length = 379
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 73/184 (39%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFVKTFPNLTALADAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ +++ P E + LPG+GR A ILS P +D ++ R+ +
Sbjct: 92 RNLHKAAQVMRDQYYGTFPTEFEQVLALPGVGRSTAGAILSSCLNAPYAILDGNVKRVLS 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K E L ++ P + + ++ G VC KP+C C + +
Sbjct: 152 RYFAVNGWPGEKKTEDRLWQLTGEVTPNAQVADFNQAMMDLGAMVCTRSKPKCSLCPLQS 211
Query: 221 LCKR 224
C+
Sbjct: 212 NCRA 215
>gi|227510377|ref|ZP_03940426.1| A/G-specific adenine glycosylase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190029|gb|EEI70096.1| A/G-specific adenine glycosylase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 370
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+TP+++ + + K L + + + + ++ ++ Q+ V + ++
Sbjct: 4 WTPEKIVAFQETLLKWYDNNKRNLPWRRDHDPYHIWISEIMLQQTQVQTVIPYYERFMKL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T Q + + E L +G Y ++ N+ + ++N+++ + P T++ L L GI
Sbjct: 64 FPTVQALASADEAILMKAWEGLGYYS-RARNLQKAAQQIVNDYNGQWPTTVKELQELSGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + R+ R+ +A +T E + +++P
Sbjct: 123 GPYTAGAIASIAFNKPVPAVDGNALRVFARLLEIDEDIAKPQTRKLFENIIKKLMPKNRP 182
Query: 192 YNAHYWLVLHGRYVCKARK 210
+ + ++ G A+
Sbjct: 183 GDFNQAIMDLGASYMSAKN 201
>gi|124007395|ref|ZP_01692102.1| A/G-specific adenine glycosylase [Microscilla marina ATCC 23134]
gi|123987228|gb|EAY26968.1| A/G-specific adenine glycosylase [Microscilla marina ATCC 23134]
Length = 358
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ K +L + + + + ++ ++ Q+ + E Q + + E+
Sbjct: 12 NWYAKNKRDLPWRHTKDPYKIWLSEIILQQTRVKQGLPYYQKFVETYPLVQDLASADEQN 71
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + + + +E P++ + L ++ G+G A+ I S A+
Sbjct: 72 VLRLWQGLGYYS-RARNLHTAAKFVHHERGGVFPESYQELLKMKGVGDYTASAIASFAYN 130
Query: 151 IPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
VD ++FR+ R+ +A K + ++P +H + ++ G
Sbjct: 131 EKVAVVDGNVFRVLARVFGIDTDIASHKGAKEFGALAKSLLPDEHTDAYNQGIMEFGALQ 190
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C +KP C C + C Q
Sbjct: 191 CTPQKPDCMYCPLQTHCVAYAQ 212
>gi|15605430|ref|NP_220216.1| endonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76789437|ref|YP_328523.1| endonuclease III [Chlamydia trachomatis A/HAR-13]
gi|166154039|ref|YP_001654157.1| endonuclease III [Chlamydia trachomatis 434/Bu]
gi|166154914|ref|YP_001653169.1| endonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|237803127|ref|YP_002888321.1| endonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|237805048|ref|YP_002889202.1| endonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311526|ref|ZP_05354096.1| endonuclease III [Chlamydia trachomatis 6276]
gi|255317827|ref|ZP_05359073.1| endonuclease III [Chlamydia trachomatis 6276s]
gi|255349089|ref|ZP_05381096.1| endonuclease III [Chlamydia trachomatis 70]
gi|255503626|ref|ZP_05382016.1| endonuclease III [Chlamydia trachomatis 70s]
gi|255507305|ref|ZP_05382944.1| endonuclease III [Chlamydia trachomatis D(s)2923]
gi|301335240|ref|ZP_07223484.1| endonuclease III [Chlamydia trachomatis L2tet1]
gi|3329151|gb|AAC68292.1| Endonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76167967|gb|AAX50975.1| endonuclease III [Chlamydia trachomatis A/HAR-13]
gi|165930027|emb|CAP03510.1| endonuclease III [Chlamydia trachomatis 434/Bu]
gi|165930902|emb|CAP06464.1| endonuclease III [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|231273348|emb|CAX10263.1| endonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274361|emb|CAX11156.1| endonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|289525741|emb|CBJ15222.1| endonuclease III [Chlamydia trachomatis Sweden2]
gi|296435313|gb|ADH17491.1| endonuclease III [Chlamydia trachomatis E/150]
gi|296436241|gb|ADH18415.1| endonuclease III [Chlamydia trachomatis G/9768]
gi|296437170|gb|ADH19340.1| endonuclease III [Chlamydia trachomatis G/11222]
gi|296438101|gb|ADH20262.1| endonuclease III [Chlamydia trachomatis G/11074]
gi|296439030|gb|ADH21183.1| endonuclease III [Chlamydia trachomatis E/11023]
gi|297140602|gb|ADH97360.1| endonuclease III [Chlamydia trachomatis G/9301]
gi|297748828|gb|ADI51374.1| Endonuclease III [Chlamydia trachomatis D-EC]
gi|297749708|gb|ADI52386.1| Endonuclease III [Chlamydia trachomatis D-LC]
Length = 211
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ L + I + +P+P L + F L++A+LLS STD VN T LF
Sbjct: 1 MKSLNVQAKRAFIISTLNRLFPNPAPSLTGWQTPFQLLIAILLSGNSTDKAVNSVTPSLF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
A Q M + ++ + I G+ +K+ I +LSHIL++ + + P TL LT LP
Sbjct: 61 AKAPDAQSMSMLAPSEIYSLIAPCGLGERKAAYIHALSHILVDRYHQEPPHTLPELTALP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK A+V LS+ +G T VDTHI R+++R L+ ++P+ VE+ L++ PKH
Sbjct: 121 GVGRKTASVFLSIYYGENTFPVDTHILRLAHRWQLSTKRSPSAVEKDLVQFFGPKHSPKL 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNL 221
H L+ + R C A C I +
Sbjct: 181 HLQLIYYARAYCPALHHNIDVCPICSF 207
>gi|33862408|ref|NP_893968.1| adenine glycosylase [Prochlorococcus marinus str. MIT 9313]
gi|33640521|emb|CAE20310.1| probable adenine glycosylase [Prochlorococcus marinus str. MIT
9313]
Length = 370
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 10/194 (5%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+WP P +L + + + +A ++ Q+ + + + T Q ++A E+++
Sbjct: 29 RWPEPNEDL---SPYGIWIAEVMLQQTQLRVMRPYWEQWMLVLSTMQHLVAAEERQVLLL 85
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ +G Y + + + + +P +LE +PGIGR A ILS A P
Sbjct: 86 WQGLGYYSRARRLHQAARQLAASP----LPSSLEAWLAVPGIGRTTAGSILSSALNRPVP 141
Query: 155 GVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
+D ++ R+ R+ Q ++ P + + L+ G VC R P
Sbjct: 142 ILDGNVRRVLARLHGCLEPPQRAQASFWQWSEALLDPLRPRDFNQALMDLGALVCTPRTP 201
Query: 212 QCQSCIISNLCKRI 225
CQ C + C
Sbjct: 202 SCQLCPWQSSCAAY 215
>gi|291612898|ref|YP_003523055.1| A/G-specific adenine glycosylase [Sideroxydans lithotrophicus ES-1]
gi|291583010|gb|ADE10668.1| A/G-specific adenine glycosylase [Sideroxydans lithotrophicus ES-1]
Length = 353
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 9/210 (4%)
Query: 25 LEEIFYLFSLK-WPSPKGELYYV--NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + +L + + + + ++ ++ Q+ V + +
Sbjct: 1 MNTFASRLIAWQNKHGRHDLPWQGQDAYRVWLSEIMLQQTQVATVIPYYQRFVAAFPSVA 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E + + +G Y + N+ + I++ +F+ P E + LPGIGR A
Sbjct: 61 ALAAASEDDVLAHWSGLGYYA-RGRNLHKAARIIVEKFNGSFPHKFEDIVELPGIGRSTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLL----RIIPPKHQYNAHY 196
+ ++A+ +D ++ R+ R +A KVE+ L ++PP+
Sbjct: 120 AAVCALAYHERRAILDGNVKRVLARYCGIAGWSGDKKVEEKLWQQAEALLPPQDVATYTQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G VC KP+C C + C ++
Sbjct: 180 ALMDMGATVCTRSKPKCVLCPVQGDCVALQ 209
>gi|331699823|ref|YP_004336062.1| HhH-GPD family protein [Pseudonocardia dioxanivorans CB1190]
gi|326954512|gb|AEA28209.1| HhH-GPD family protein [Pseudonocardia dioxanivorans CB1190]
Length = 294
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + ++V+ + Q+ V TP + A
Sbjct: 13 LVPWYAVAARDLPWRRPGTTPWGVMVSEFMLQQTPVARVEPVWLRWMADWPTPSALAAAP 72
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + I D +P ++ L LPG+G A + +
Sbjct: 73 RADVLRAWGKLGYPRRALRLHEAAATIATVHDDI-VPADVDALEALPGVGSYTARAVAAF 131
Query: 148 AFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQS---LLRIIPPKHQ--YNAHYWLVLH 201
+G VDT++ R+ R A P +V + ++P ++
Sbjct: 132 GYGRRCAVVDTNVRRVVARAVHGAGDAGPARVRADLADVEALLPADEAEAATFSIAMMEL 191
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P+C +C + C
Sbjct: 192 GATVCTARTPRCAACPVRERC 212
>gi|319642902|ref|ZP_07997538.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_40A]
gi|317385450|gb|EFV66393.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_40A]
Length = 345
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 11/197 (5%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + N + + ++ ++ Q+ V + + A E +
Sbjct: 3 DWYRENGRDLPWRRTKNPYLIWISEIILQQTRVVQGYDYYQRFVARFPDVFALAAADEDE 62
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ Y + +G Y + + + P T G+ L G+G A I S A+G
Sbjct: 63 VMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYTGVRALKGVGEYTAAAICSFAYG 119
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLHGRYV 205
+P VD +++R+ +R + + ++ + + ++ G
Sbjct: 120 MPYAVVDGNVYRVLSRWLGIDTPIDSAEGKKLFVRVADELLDRERPGLYNQAIMDFGALQ 179
Query: 206 CKARKPQCQSCIISNLC 222
C P C C +++ C
Sbjct: 180 CTPVAPDCLFCPLNDSC 196
>gi|258593883|emb|CBE70224.1| putative Endonuclease III [NC10 bacterium 'Dutch sediment']
Length = 219
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/213 (29%), Positives = 115/213 (53%), Gaps = 6/213 (2%)
Query: 19 LYTPKELEEIFY----LFSLKWPSPKGEL--YYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ T +++ E+ S+ P+ G++ + F ++++ +LS Q+ D +A++
Sbjct: 1 MATNRQITEVLQQVRHAISVWEPAVVGKIAEDSRDPFRVLISCILSQQTKDQITGEASER 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L+ +AD P +LA+ E ++ I + Y+ K+ I + L+ FD ++P T+E L
Sbjct: 61 LYRLADRPDTILALSELQIARAIYPVSFYKTKARTIRKVCQDLLTRFDGRVPDTIEALLS 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN+++++ + P I VDTH+ RISNR G +TP + E +L +P +H
Sbjct: 121 LTGVGRKTANLVVTVGYRKPGICVDTHVHRISNRWGYVSTRTPEQTEMALRLKLPKRHWI 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV G+ +C+ P C C I C ++
Sbjct: 181 YYNDLLVPFGQNLCRPISPFCSRCPIERWCAKV 213
>gi|77412146|ref|ZP_00788469.1| A/G-specific adenine glycosylase [Streptococcus agalactiae CJB111]
gi|77161806|gb|EAO72794.1| A/G-specific adenine glycosylase [Streptococcus agalactiae CJB111]
Length = 374
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWPEDRIASFRRTLLGWYDXEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|225468856|ref|XP_002265027.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297736662|emb|CBI25679.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 80/250 (32%), Gaps = 33/250 (13%)
Query: 4 SKKSDSYQGNSPLGCLYTPK----ELEEIFYLFSLKWPSPKGELYYVN------------ 47
K+ + S + + E +I + K L +
Sbjct: 58 EKRKRKQRTTSEIEVMDIEDFGRDETLKIRASLLGWYDLNKRNLPWRTPTTTTTHEDEDD 117
Query: 48 ----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+ + V+ ++ Q+ V + T + +++
Sbjct: 118 ADAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAG 177
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G YR+ + I + + L +PGIG A I S+AF VD
Sbjct: 178 LGYYRRARCLLEGAKMISEGKCGFPRTTSA--LREVPGIGNYTAGAIASIAFKEAVPVVD 235
Query: 158 THIFRISNRIGLA-----PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
++ R+ R+ T + + +++ P + + L+ G +C KP
Sbjct: 236 GNVVRVIARLKAISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPI 295
Query: 213 CQSCIISNLC 222
C +C +S+ C
Sbjct: 296 CSACPVSDQC 305
>gi|212716244|ref|ZP_03324372.1| hypothetical protein BIFCAT_01160 [Bifidobacterium catenulatum DSM
16992]
gi|212660756|gb|EEB21331.1| hypothetical protein BIFCAT_01160 [Bifidobacterium catenulatum DSM
16992]
Length = 321
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 19/222 (8%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E + + W + +L + + ++V+ ++S Q+ V E
Sbjct: 19 ENVEAVAVALAEWWHASARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWNDWMERWP 78
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + +G R+ + + ++ +++ N++PQT + L LPGIG
Sbjct: 79 DAAALAGAAKSDVITAWGRLGYPRRALR-LQECARVVASDYGNELPQTYDELLALPGIGD 137
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLR-IIPPKHQYN- 193
A+ ++S AFG VDT+I R+ +R+ L + G + E++L + ++P
Sbjct: 138 YTASAVMSFAFGERIAVVDTNIRRVLSRVFLGVESLGGAASPAERALAKQVLPQDSVSKC 197
Query: 194 ---------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C++C +S+ C ++
Sbjct: 198 RRFDRSSVVWNQSVMELGAIVCTAKSPLCEACPVSSRCVFLR 239
>gi|326423848|ref|NP_760414.2| A/G-specific adenine glycosylase [Vibrio vulnificus CMCP6]
gi|319999218|gb|AAO09941.2| A/G-specific adenine glycosylase [Vibrio vulnificus CMCP6]
Length = 350
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 7/200 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ + + +++ ++ ++ Q+ V + + T + + ++
Sbjct: 13 DAYGRKNLPWQHNKSAYSVWLSEIMLQQTQVATVIPYYQRFLQRFPTVVDLANAEQDEVL 72
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++ ++ + P LE + LPGIGR A +LS P
Sbjct: 73 HLWTGLGYYA-RARNLHKAAKMVAEQYHGEFPLELEQMNALPGIGRSTAAAVLSSVHKQP 131
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R +R G K Q P + ++ G VC
Sbjct: 132 HAILDGNVKRTLSRAFAVEGWPGQKTVENQLWQLAEAHTPNTDVDKYNQAMMDMGAMVCT 191
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
KP+C C ++ LC+ KQ
Sbjct: 192 RSKPKCTLCPVAELCQANKQ 211
>gi|300770394|ref|ZP_07080273.1| A/G-specific adenine glycosylase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762870|gb|EFK59687.1| A/G-specific adenine glycosylase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 349
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 78/206 (37%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ E T Q + +
Sbjct: 5 KRLIAWYDQHGRDLPWRHTQDPYIIWLSEIILQQTRVEQGMPYFMRFSEQYPTVQDLASA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + N + +G Y + N+ + +++++F P + + +LPG+G A I S
Sbjct: 65 DEDDILNLWQGLGYYS-RGRNMHKAARMVVSDFAGIFPTAYDEVIKLPGVGEYTAAAISS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ +D ++FR+ +R + + ++ + ++
Sbjct: 124 ISANQAKAVLDGNVFRVLSRYFGVEVEINTPAGKKIFTELANEMLDADDPARYNQAIMDF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G CK + P C SCI + C K+
Sbjct: 184 GAMQCKPKSPTCGSCIFNQECVAPKE 209
>gi|237729891|ref|ZP_04560372.1| adenine DNA glycosylase [Citrobacter sp. 30_2]
gi|226908497|gb|EEH94415.1| adenine DNA glycosylase [Citrobacter sp. 30_2]
Length = 364
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 42 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLAHAPLDEVLHLWTGLGYYA-RA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ PQT + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 101 RNLHKAAQQVVTLHSGIFPQTFDEVAALPGVGRSTAGAILSLSLGQHFPILDGNVKRVLA 160
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C C + N
Sbjct: 161 RCYAVSGWPGKKEVEKKLWELSEQVTPAQGVERFNQAMMDLGAMVCTRSKPKCSLCPLEN 220
Query: 221 LC 222
C
Sbjct: 221 GC 222
>gi|160931541|ref|ZP_02078936.1| hypothetical protein CLOLEP_00373 [Clostridium leptum DSM 753]
gi|156869412|gb|EDO62784.1| hypothetical protein CLOLEP_00373 [Clostridium leptum DSM 753]
Length = 364
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L + + L + + + ++ ++ Q+ V + T + + A
Sbjct: 26 LLLSWYDRCRRILPWREDPQPYHVWLSEIMLQQTRVEAVKEYYSRFLRELPTIRDLAAAP 85
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E KL +G Y + N+ + + ++D ++P E L RLPG+G A I S+
Sbjct: 86 EDKLLKLWEGLGYYN-RVRNLQKAALACVEQYDGQLPGDFEELKRLPGVGEYTAGAIGSI 144
Query: 148 AFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AFG+P VD ++ R+ R+ +T ++ + + P + + ++ G
Sbjct: 145 AFGLPVTAVDGNVLRVMTRLTADSSDVTSPETKKRITALVQDLQPEDRPGDFNQAMMDLG 204
Query: 203 RYVCKARK-PQCQSCIISNLCKRIK 226
VC P+C SC +S LC+ +
Sbjct: 205 ATVCLPNGVPKCGSCPLSALCESRR 229
>gi|118619343|ref|YP_907675.1| adenine glycosylase MutY [Mycobacterium ulcerans Agy99]
gi|118571453|gb|ABL06204.1| adenine glycosylase MutY [Mycobacterium ulcerans Agy99]
Length = 303
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 13/221 (5%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKAT 70
P + P+ + + +L + + + ++V+ + Q+ V
Sbjct: 6 PQPSMTCPEHIPA--TNLVAWYERCYRDLPWRAPDVSPWQILVSEFMLQQTPVSRVLSIW 63
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
T + +G ++++ + + ++ + D+ +P ++ L
Sbjct: 64 PDWVRRWPTASATATATAADVLRAWGKLGY-PRRAKRLHECAMVIAGDHDDVVPDDVDTL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVEQSLL--RII 186
LPG+G A + A+ VDT++ R+ R G A +P+ ++
Sbjct: 123 LTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVARAVHGRAEAGSPSATRDHAEVSALL 182
Query: 187 PPKHQY-NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P L+ G VC AR P+C C ++ C +
Sbjct: 183 PDDELAPRFSVALMELGATVCTARAPRCGQCPLAE-CAWRR 222
>gi|115487832|ref|NP_001066403.1| Os12g0211400 [Oryza sativa Japonica Group]
gi|77553918|gb|ABA96714.1| A/G-specific adenine glycosylase family protein [Oryza sativa
Japonica Group]
gi|113648910|dbj|BAF29422.1| Os12g0211400 [Oryza sativa Japonica Group]
Length = 474
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH------------ 48
+ S + G + + + + + +L +
Sbjct: 38 LASPSGCRAVAGPTTAAAAVRAE--------LLRWYDANRRDLPWRRAAEPPAGSGSGRG 89
Query: 49 -----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRK 103
+ + V+ ++ Q+ V T + A ++++ +G YR+
Sbjct: 90 EEQRAYAVWVSEVMLQQTRVPVVVDYYSRWMARWPTVDSLAAATQEEVNEMWAGLGYYRR 149
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ I+ T L + GIG A I S+AF VD ++ R+
Sbjct: 150 ARFLLEGAKQIVEKGEFPCTAST---LREVRGIGDYTAGAIASIAFNEVVPVVDGNVVRV 206
Query: 164 SNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
+R P + Q ++ P + + ++ G +C KP C C +
Sbjct: 207 ISRFYAIPDNPKESSTVKRFWQLTGELVDPSRPGDFNQAMMELGATLCSKTKPGCSQCPV 266
Query: 219 SNLCKRI 225
S+ C+ +
Sbjct: 267 SSHCQAL 273
>gi|261867326|ref|YP_003255248.1| A/G-specific adenine glycosylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412658|gb|ACX82029.1| A/G-specific adenine glycosylase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 396
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 74/184 (40%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 50 KTLYGVWLSEVMLQQTQVTTVIPYFERFVKTFPNLTALANAPLDEVLHLWTGLGYYA-RA 108
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ ++ + P E + LPG+GR A +LS P +D ++ R+ +
Sbjct: 109 RNLHKAAQIMRDQHGGEFPTEFEQVWALPGVGRSTAGAVLSSCLNAPYPILDGNVKRVLS 168
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K E L + P + + + ++ G VC KP+C+ C + +
Sbjct: 169 RYFAVSGWPGEKKTEDHLWHLTAQVTPTEQVADFNQAMMDIGAMVCTRSKPKCELCPLKS 228
Query: 221 LCKR 224
CK
Sbjct: 229 DCKA 232
>gi|290476330|ref|YP_003469234.1| adenine DNA glycosylase [Xenorhabdus bovienii SS-2004]
gi|289175667|emb|CBJ82470.1| adenine DNA glycosylase [Xenorhabdus bovienii SS-2004]
Length = 346
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ + + ++ + + ++ ++ Q+ V ++
Sbjct: 1 MMEAEQFSQAVLEWYHRYGRKTLPWQLEKTSYHVWLSEVMLQQTQVATVIPYFQNFISRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A ++ + +G Y ++ N+ + ++ + + P T + LPG+G
Sbjct: 61 PNVASLAAAPLDEVLHLWTGLGYYA-RARNLHKAAQQIVAIHNGQFPTTFSDVIALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQY 192
R A ILS++ G +D ++ R+ R G +VE L R+ P +
Sbjct: 120 RSTAGAILSLSQGKHFPILDGNVKRVLARCYAIAGWPGKKEVENQLWDISTRVTPKQGVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 YFNQAMMDLGAMVCTRSKPKCEICPLNTGCISY 212
>gi|170724079|ref|YP_001751767.1| A/G-specific adenine glycosylase [Pseudomonas putida W619]
gi|169762082|gb|ACA75398.1| A/G-specific adenine glycosylase [Pseudomonas putida W619]
Length = 355
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + N + + V+ ++ Q+ V + T Q + E
Sbjct: 12 DWYDQHGRHDLPWQQGINPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAARIVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G + + R P + + ++ G
Sbjct: 131 GIRVPILDGNVKRVLARFTAQAGYPGEPKVANALWATAERFTPQQRANHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPSCLLCPVRSGCEA 210
>gi|254516063|ref|ZP_05128123.1| A/G-specific adenine glycosylase [gamma proteobacterium NOR5-3]
gi|219675785|gb|EED32151.1| A/G-specific adenine glycosylase [gamma proteobacterium NOR5-3]
Length = 359
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 10/205 (4%)
Query: 31 LFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + ++ ++ Q+ V + + +
Sbjct: 7 RLLAWYDDHGRHNLPWQRDATPYHVWLSEIMLQQTQVATVIPYYERFIASFPDIHALASA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ ++ +G Y ++ N+ + ++ +F + P ++ L LPG+GR A ILS
Sbjct: 67 ETDQVLHHWSGLGYYA-RARNLHKAAKTIVRDFAGEFPADVDALQALPGVGRSTAGAILS 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLH 201
A G +D ++ R+ R G + + P + ++
Sbjct: 126 TALGGRAAILDGNVKRVLARFHAVEGWPGKTAVAAALWDLAEQHTPQSRVAHYTQAIMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G +C KP CQ C ++ C ++
Sbjct: 186 GATLCTRSKPDCQRCPLAKGCAALE 210
>gi|82751522|ref|YP_417263.1| A/G-specific adenine glycosylase DNA repair protein [Staphylococcus
aureus RF122]
gi|82657053|emb|CAI81490.1| probable A/G-specific adenine glycosylase DNA repair protein
[Staphylococcus aureus RF122]
Length = 345
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 79/205 (38%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVRDKYEGLVPKDPDQFIALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTESGTFNQAMMELG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C +
Sbjct: 188 ALICTPKNPLCLFCPVQENCVAFDK 212
>gi|302340587|ref|YP_003805793.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
gi|301637772|gb|ADK83199.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
Length = 224
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 3/178 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++V+ ++S ++ D ++++ LF+ A + A+ +++ I G YR K+
Sbjct: 42 RDPYRVLVSTIISLRTKDAVTLESSRRLFQEAPDLGSLAAMDTEQIAKLIYPAGFYRVKA 101
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ +++ L +P + L LPG+GRK AN++L +AFGIP I VD H+ RISN
Sbjct: 102 AQLKTIAMKLKETG---VPAERDRLLALPGVGRKTANLVLGLAFGIPAICVDVHVHRISN 158
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
R+GL TP K E +L I+P ++ + V G+ +CK P C C ++++C
Sbjct: 159 RLGLITTTTPEKSEMALEAILPRRYWIEINTLFVAFGQTLCKPVSPLCSRCPLADVCP 216
>gi|292487071|ref|YP_003529941.1| A/G-specific adenine glycosylase [Erwinia amylovora CFBP1430]
gi|292900544|ref|YP_003539913.1| A/G-specific adenine glycosylase [Erwinia amylovora ATCC 49946]
gi|291200392|emb|CBJ47520.1| A/G-specific adenine glycosylase [Erwinia amylovora ATCC 49946]
gi|291552488|emb|CBA19533.1| A/G-specific adenine glycosylase [Erwinia amylovora CFBP1430]
gi|312171175|emb|CBX79434.1| A/G-specific adenine glycosylase [Erwinia amylovora ATCC BAA-2158]
Length = 358
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPNVSDLAAAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++ PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQTVVDKHGGVFPQTFAEVADLPGVGRSTAGAILSLALGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + ++ G VC KP+C+ C +
Sbjct: 147 RCYAVAGWPARKEVEKRLWHISEEVTPANGVSQFNQAMMDLGAMVCTRSKPKCEICPLKT 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|298505566|gb|ADI84289.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter sulfurreducens KN400]
Length = 218
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 20 YTPKELEEIFYLFSLK---WPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
++ + + WPSP + N F ++V+ +LS ++ D A++ L
Sbjct: 1 MKESDIHVVMAGLAEAVKQWPSPAVTIVSQREGNPFKVLVSCILSLRTQDRTTGPASERL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +ADTP M+ + + ++ I +G Y K+E I+ + +L+ +D +P L+ L
Sbjct: 61 FALADTPAAMVRLSKDDIEKAIYPVGFYHTKAEQILEICRVLLERYDGGVPDELDELLAF 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN+++++ FG P I VDTH+ RI NR G KTP + E SL RI+P ++
Sbjct: 121 KGVGRKTANLVITLGFGKPGICVDTHVHRICNRWGYIRTKTPEQTEFSLRRILPHRYWLV 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ +LV G+ C P+C +C+++ C
Sbjct: 181 INDYLVTFGQNHCTPVSPRCSTCVLAQWC 209
>gi|298386445|ref|ZP_06996001.1| A/G-specific adenine glycosylase [Bacteroides sp. 1_1_14]
gi|298260822|gb|EFI03690.1| A/G-specific adenine glycosylase [Bacteroides sp. 1_1_14]
Length = 357
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ + + +
Sbjct: 15 EAIVEWYKEYKRDLPWRESSDPYRIWISEIILQQTRVAQGYDYFLRFIKRFPDVKALADA 74
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 75 DEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPETYPEVLALKGVGEYTAAAICS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R + + ++ + + K + ++
Sbjct: 130 FAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKQPALYNQGIMDF 189
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C +++ C +
Sbjct: 190 GAIQCTPQSPDCLFCPLADSCSAL 213
>gi|333030023|ref|ZP_08458084.1| A/G-specific adenine glycosylase [Bacteroides coprosuis DSM 18011]
gi|332740620|gb|EGJ71102.1| A/G-specific adenine glycosylase [Bacteroides coprosuis DSM 18011]
Length = 349
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 71/209 (33%), Gaps = 13/209 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + + + + ++ ++ Q+ V +
Sbjct: 1 MEFFGKEIEKWFDEYGRDLPWRKTKDPYLIWISEVILQQTRVVQGFDYYMKFKTRFPNVE 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + E ++ Y + +G Y + + P T + + L G+G A
Sbjct: 61 ALASAEEDEVLKYWQGLGYYSRARNLHAAAKS-----IQGDFPSTYKEVLALKGVGAYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S A+ +P VD +++R+ +R + + ++ + +
Sbjct: 116 AAICSFAYDMPYAVVDGNVYRVLSRYLGISTPIDSSLGKKEFSDIAQELLDKNNPAKYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G C + P C+ C + + C
Sbjct: 176 AIMDFGAIQCVPKNPACEDCPLVDSCYAY 204
>gi|254669773|emb|CBA04033.1| putative A/G-specific adenine glycosylase [Neisseria meningitidis
alpha153]
Length = 346
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQILAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVGQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLL----RIIPPK--HQ 191
A I + AF +D ++ R+ R+ G K E +L ++P +
Sbjct: 120 STAAAICAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENALWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|219685572|ref|ZP_03540388.1| endonuclease III [Borrelia garinii Far04]
gi|219672850|gb|EED29873.1| endonuclease III [Borrelia garinii Far04]
Length = 205
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 102/191 (53%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ +LSA++TD VNK + LFE + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMAILSARTTDNLVNKISPCLFERYGNFESLSRANIRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K+ NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKTGFYSRKANNIVNCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + HGR VC AR C
Sbjct: 134 IVDTHFSRVIKRHALSLENSPIKIELDLKRRIEPCKQYRFSMAINKHGREVCTARNVSCA 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFSPRV 204
>gi|152964568|ref|YP_001360352.1| HhH-GPD family protein [Kineococcus radiotolerans SRS30216]
gi|151359085|gb|ABS02088.1| HhH-GPD family protein [Kineococcus radiotolerans SRS30216]
Length = 307
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 81/226 (35%), Gaps = 13/226 (5%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQST 62
+ +P P + ++ + + +L + + + ++V+ ++ Q+
Sbjct: 2 TPRRAPATP--TPTRPAPVADLHERVLTWYDAHARDLPWRAPGCSPWGVLVSEVMLQQTP 59
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + P + A + +G R+ + + + + +E +
Sbjct: 60 VARVLPRWEAWLARWPAPGDLAAEPPGEAVRMWDRLGYPRRALR-LHAAAVAIRDEHGGR 118
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR----IGLAPGKTPNKV 178
+P L LPG+G A + S AFG VDT++ R+ R
Sbjct: 119 VPDDHARLLALPGVGTYTAAAVASFAFGQRHAVVDTNVRRVHARAVTGAAEPAAALTAAE 178
Query: 179 EQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++P ++ G VC AR P+C +C + + C
Sbjct: 179 NRLAVELLPEDEGTAARWAVAVMELGALVCTARAPRCDACPLLDRC 224
>gi|92118693|ref|YP_578422.1| A/G-specific adenine glycosylase [Nitrobacter hamburgensis X14]
gi|91801587|gb|ABE63962.1| A/G-specific DNA-adenine glycosylase [Nitrobacter hamburgensis X14]
Length = 392
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 33/224 (14%)
Query: 31 LFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + + L + + + + ++ ++ Q+T V + M
Sbjct: 28 LLLAWYDLHRRRLPWRALPGKAVDPYFVWLSEIMLQQTTVKAVGPYFEKFLARWPDVDAM 87
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G Y ++ N+ + + + + P T EGL LPGIG A
Sbjct: 88 ARASLDDVLRMWAGLGYYS-RARNLHACAVAVRRDHGGTFPDTEEGLHALPGIGPYTAAA 146
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNA------ 194
I ++AFG T+ VD +I R+ +R+ P + + ++ P +
Sbjct: 147 IAAIAFGRRTMPVDGNIERVVSRLFAVEEALPKAKPRIRELAATLLGPSRSGDVKTRAGR 206
Query: 195 ----------------HYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C +KP C C +S+ C
Sbjct: 207 DGKSRAGDGKSRAGDSAQALMDLGATICTPKKPACALCPLSDDC 250
>gi|157148510|ref|YP_001455829.1| adenine DNA glycosylase [Citrobacter koseri ATCC BAA-895]
gi|157085715|gb|ABV15393.1| hypothetical protein CKO_04336 [Citrobacter koseri ATCC BAA-895]
Length = 383
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 61 KTPYKVWLSEVMLQQTQVATVIPYFERFMSHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 119
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A +LS++ +D ++ R+
Sbjct: 120 RNLHKAAQQVATLHGGRFPETFDEVAALPGVGRSTAGAVLSLSLDKHFPILDGNVKRVLA 179
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + ++ G VC +P+C C + N
Sbjct: 180 RCYAVSGWPGKKEVEKRLWDLSEQVTPANGVARFNQAMMDLGAMVCTRSRPKCSLCPLQN 239
Query: 221 LC 222
C
Sbjct: 240 GC 241
>gi|218130465|ref|ZP_03459269.1| hypothetical protein BACEGG_02054 [Bacteroides eggerthii DSM 20697]
gi|217987344|gb|EEC53674.1| hypothetical protein BACEGG_02054 [Bacteroides eggerthii DSM 20697]
Length = 350
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 75/206 (36%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ V + + + A
Sbjct: 10 ETLLDWYADNKRDLPWRDTADPYRIWISEIILQQTRVVQGYEYFLRFIRRFPDVETLAAA 69
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + K P + + + L G+G A I S
Sbjct: 70 SEDEVLKYWQGLGYYSRARNLHAAAKS-----MNGKFPASYQEVRALKGVGDYTAAAICS 124
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLH 201
+A+ +P VD +++R+ +R + + ++ + ++
Sbjct: 125 IAYNMPYAVVDGNVYRVLSRYWGVDTPIDSTEGKRLFAVLADEMLDKSRPAIYNQAIMDF 184
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C +++ C + +
Sbjct: 185 GAVQCTPQAPNCMFCPLADSCTALSK 210
>gi|15834694|ref|NP_296453.1| endonuclease III [Chlamydia muridarum Nigg]
gi|270284861|ref|ZP_06194255.1| endonuclease III [Chlamydia muridarum Nigg]
gi|270288889|ref|ZP_06195191.1| endonuclease III [Chlamydia muridarum Weiss]
gi|301336240|ref|ZP_07224442.1| endonuclease III [Chlamydia muridarum MopnTet14]
gi|7190104|gb|AAF38952.1| endonuclease III [Chlamydia muridarum Nigg]
Length = 210
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ L P + I + +P+P+ L + + F L++A+LLS STD VN LF
Sbjct: 1 MNKLRVPSKRAFILNTLNQLFPNPEPSLKGWHSPFQLLIAILLSGNSTDKVVNTVIPALF 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
A Q M + ++ + I G+ +KS I LS IL+ + + P++L LT+LP
Sbjct: 61 AKAPDAQSMSKLPLSEIYSLIAPCGLGERKSVYIHELSCILVERYAQEPPRSLSELTKLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+GRK A+V LS+ +G T VDTHI R+++R L+ ++P+ E+ L+ +
Sbjct: 121 GVGRKTASVFLSIYYGENTFPVDTHILRLAHRWKLSTKRSPSAAEKDLVAFFGKTNSPKL 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNL 221
H L+ + R C A + +C I +
Sbjct: 181 HLQLIYYAREYCPALHHKIDACPICSF 207
>gi|29346908|ref|NP_810411.1| A/G-specific adenine glycosylase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338806|gb|AAO76605.1| A/G-specific adenine glycosylase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 357
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ + + +
Sbjct: 15 EAIVEWYKEYKRDLPWRESSDPYRIWISEIILQQTRVAQGYDYFLRFIKRFPDVKALADA 74
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 75 DEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPETYPEVLALKGVGEYTAAAICS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R + + ++ + + K + ++
Sbjct: 130 FAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKQPALYNQGIMDF 189
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C +++ C +
Sbjct: 190 GAIQCTPQSPDCLFCPLADSCSAL 213
>gi|28899400|ref|NP_799005.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus RIMD
2210633]
gi|260366271|ref|ZP_05778730.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus K5030]
gi|260878912|ref|ZP_05891267.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus AN-5034]
gi|260898287|ref|ZP_05906783.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus Peru-466]
gi|28807636|dbj|BAC60889.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus RIMD
2210633]
gi|308085868|gb|EFO35563.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus Peru-466]
gi|308090512|gb|EFO40207.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus AN-5034]
gi|308113513|gb|EFO51053.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus K5030]
Length = 358
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + +++ + P LE + LPGIGR A +LS
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKEVAHKYSGEFPLNLEQMNALPGIGRSTAAAVLSSVH 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVEGWPGQKKVENQLWEIAEAHTPQTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C +++LC KQ
Sbjct: 189 VCTRSKPKCTLCPVADLCVAKKQ 211
>gi|258451067|ref|ZP_05699103.1| A/G-specific adenine glycosylase [Staphylococcus aureus A5948]
gi|257861309|gb|EEV84121.1| A/G-specific adenine glycosylase [Staphylococcus aureus A5948]
Length = 345
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 80/205 (39%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + E+ + N + + ++ ++ Q+ V E T + +
Sbjct: 9 ENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y +G Y ++ N + + ++++ +P+ + L G+G ++S
Sbjct: 69 SEDEVLKYWEGLGYYS-RARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMS 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIP--PKHQYNAHYWLVLHG 202
+A+ +P VD ++FR+ +R+ + + ++P + ++ G
Sbjct: 128 IAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMEIG 187
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C + C+ +
Sbjct: 188 ALICTPKNPLCLFCPVQENCEAFDK 212
>gi|325204387|gb|ADY99840.1| A/G-specific adenine glycosylase [Neisseria meningitidis
M01-240355]
Length = 346
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQILAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVGQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLL----RIIPPK--HQ 191
A I + AF +D ++ R+ R+ G K E +L ++P +
Sbjct: 120 STAAAICAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENALWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|311278122|ref|YP_003940353.1| A/G-specific adenine glycosylase [Enterobacter cloacae SCF1]
gi|308747317|gb|ADO47069.1| A/G-specific adenine glycosylase [Enterobacter cloacae SCF1]
Length = 350
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHNGQFPETFDEVAALPGVGRSTAGAILSLSLGQHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L +I P K + ++ G VC KP+C+ C + N
Sbjct: 147 RCYAVGGWPGKKEVENRLWQISEAVTPAKGVERFNQAMMDLGAMVCTRSKPKCELCPLGN 206
Query: 221 LCKR 224
C+
Sbjct: 207 GCEA 210
>gi|116668745|ref|YP_829678.1| HhH-GPD family protein [Arthrobacter sp. FB24]
gi|116608854|gb|ABK01578.1| HhH-GPD family protein [Arthrobacter sp. FB24]
Length = 347
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + + ++V+ ++ Q+ V V + +P +
Sbjct: 43 LHDALDDWFGTTARDLPWRDPECSPWGVLVSEIMLQQTPVVRVLPVWEDWLRRWPSPAHL 102
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + + ++ + D +P T + L LPG+G A
Sbjct: 103 ATEASGEAVRHWGRLGYPRRALR-LHAAAVAIVEKHDGGVPGTYDELLELPGVGSYTAAA 161
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG---LAPGKTPNKVE-QSLLRIIPPK--HQYNAHYW 197
+ + AFG VDT+I R+ R+ P ++ E + ++P +
Sbjct: 162 VAAFAFGRRETVVDTNIRRVHARLFSGTALPSQSLTAAEMRLAAELLPADVGLSVRWNAA 221
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC AR P+C C + C
Sbjct: 222 VMELGALVCTARAPKCGECPVRGAC 246
>gi|322387743|ref|ZP_08061352.1| A/G-specific adenine glycosylase [Streptococcus infantis ATCC
700779]
gi|321141610|gb|EFX37106.1| A/G-specific adenine glycosylase [Streptococcus infantis ATCC
700779]
Length = 384
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 86/216 (39%), Gaps = 9/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + E
Sbjct: 11 MWEDEKILSFRQKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + + ++NEF+ + P T EG++ L G
Sbjct: 71 SFPTVESLANAPEERLLKAWEGLGYYS-RVRNMQTAAQQIMNEFNGEFPSTYEGISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF + VD ++ R+ + + + +I P+
Sbjct: 130 IGPYTAGAISSIAFNLAQPAVDGNVMRVLARLFEVNHDIGNPSNRKIFQAMMEILIDPER 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + L+ G + P+ + + + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPRPEDSPVKDFSAAYQ 225
>gi|254230235|ref|ZP_04923627.1| A/G-specific adenine glycosylase [Vibrio sp. Ex25]
gi|262393219|ref|YP_003285073.1| A/G-specific adenine glycosylase [Vibrio sp. Ex25]
gi|151937267|gb|EDN56133.1| A/G-specific adenine glycosylase [Vibrio sp. Ex25]
gi|262336813|gb|ACY50608.1| A/G-specific adenine glycosylase [Vibrio sp. Ex25]
Length = 358
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + + ++ + P +E + LPGIGR A +LS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAQEVASTYNGEFPLDIEKMNALPGIGRSTAAAVLSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVEGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C +++LC +Q
Sbjct: 189 VCTRSKPKCSLCPVADLCVAKQQ 211
>gi|330859012|emb|CBX69370.1| A/G-specific adenine glycosylase [Yersinia enterocolitica W22703]
Length = 285
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ ++ + + L + + + ++ ++ Q+ V +
Sbjct: 20 QAQQFAHVVLEWYQRVGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPD 79
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A ++ + +G Y ++ N+ + ++ + P T + + LPGIGR
Sbjct: 80 ISALAAAPLDEVLHLWTGLGYYA-RARNLHKAAQTVVEHHQGEFPTTFDEILALPGIGRS 138
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNA 194
A ILS++ G +D ++ R+ R G K + Q + P K
Sbjct: 139 TAGAILSLSLGQHFPILDGNVKRVLARCYAVEGWPGKKDVEGRLWQISEDVTPAKGVGQF 198
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 199 NQAMMDLGAIVCTRSKPKCELCPLNIGCLAY 229
>gi|269101807|ref|ZP_06154504.1| A/G-specific adenine glycosylase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161705|gb|EEZ40201.1| A/G-specific adenine glycosylase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 356
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T Q + + ++ + +G Y ++
Sbjct: 27 KTPYKVWLSEIMLQQTQVATVIPYFERFMAQFPTVQDLAQAPQDEVLHLWTGLGYYA-RA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ +++ P ++ + LPGIGR A +LS++ +D ++ R +
Sbjct: 86 RNLHKAAQVIVEQYNGIFPTDIDQVQALPGIGRSTAGAVLSLSLKQHHPILDGNVKRTLS 145
Query: 166 RIGLAPGKT-PNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSCIISN 220
R G VE L +I + + ++ G +C KP+C+ C +++
Sbjct: 146 RCYGIEGWPGQKAVENKLWQIAEQNTPSDGVERYNQAMMDMGAMICTRSKPKCELCPVAD 205
Query: 221 LC 222
+C
Sbjct: 206 MC 207
>gi|312131595|ref|YP_003998935.1| a/g-specific adenine glycosylase [Leadbetterella byssophila DSM
17132]
gi|311908141|gb|ADQ18582.1| A/G-specific adenine glycosylase [Leadbetterella byssophila DSM
17132]
Length = 322
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 9/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + K L + N + + ++ ++ Q+ + T +
Sbjct: 2 VQNRIISWYLQNKRSLPWRNTENPYFIWISEIILQQTRVAQGLPYFERFVAQYPTIFDLA 61
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E ++ + +G Y + N+ + ++ P + + + L G+G A I
Sbjct: 62 AAPEDEVLRLWQGLGYYS-RGRNLHQTAKYIVEHHKGVFPNSYQEIISLKGVGPYTAAAI 120
Query: 145 LSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
S AF +D ++ R+ +RI + T ++ I + ++
Sbjct: 121 ASFAFKERIPAIDGNVLRVISRILRIESPIDSPVTQKEIRNIAEEWISTVEPDTFNQAMM 180
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G C + P C++C + C
Sbjct: 181 EFGAIQCTPKAPLCETCPVQVYCLSY 206
>gi|219684146|ref|ZP_03539090.1| endonuclease III [Borrelia garinii PBr]
gi|219672135|gb|EED29188.1| endonuclease III [Borrelia garinii PBr]
Length = 205
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 102/191 (53%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ +LSA++TD VNK + LFE + + + ++
Sbjct: 14 RYPDVKPFLNYKNNYELLIMAILSARTTDNLVNKISPCLFERYGNFESLSRANIRDVEKL 73
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K+ NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 74 IYKTGFYSRKAYNIVNCSIDILEKFNGVIPNNIFDLVKLPGVGRKTANVILGSVYNKPAI 133
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + HGR VC AR C
Sbjct: 134 IVDTHFSRVIKRHALSLENSPIKIELDLKRRIEPCKQYRFSMAINKHGREVCTARNVSCA 193
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 194 NCFLEKFSPRV 204
>gi|160889022|ref|ZP_02070025.1| hypothetical protein BACUNI_01442 [Bacteroides uniformis ATCC 8492]
gi|156861489|gb|EDO54920.1| hypothetical protein BACUNI_01442 [Bacteroides uniformis ATCC 8492]
Length = 346
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + + ++ ++ Q+ + + + A E
Sbjct: 8 LLDWYAENKRDLPWRNTTDPYLIWISEIILQQTRVAQGYEYFLRFIKRFPDVVSLAAASE 67
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ Y + +G Y + + P+T + L G+G A I S A
Sbjct: 68 DEVMKYWQGLGYYSRARNLHAAAKS-----MKGTFPKTYAEVRALKGVGDYTAAAICSFA 122
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ +P VD +++R+ +R + + ++ + + ++ G
Sbjct: 123 YDMPYAAVDGNVYRVLSRYFGIDVPIDSTEGKKTFTALAGEVLDKSRPADYNQAIMDFGA 182
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C + P C C +S C+ + +
Sbjct: 183 VQCTLQSPNCLFCPLSGSCRALSE 206
>gi|37681068|ref|NP_935677.1| A/G-specific adenine glycosylase [Vibrio vulnificus YJ016]
gi|37199818|dbj|BAC95648.1| A/G-specific adenine glycosylase [Vibrio vulnificus YJ016]
Length = 350
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 7/200 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ + + +++ ++ ++ Q+ V + + T + + ++
Sbjct: 13 DAYGRKNLPWQHNKSAYSVWLSEIMLQQTQVATVIPYYQRFLQRFPTVVDLANAEQDEVL 72
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++ ++ + P LE + LPGIGR A +LS P
Sbjct: 73 HLWTGLGYYA-RARNLHKAAKMVAEQYHGEFPLELEQMNALPGIGRSTAAAVLSSVHKQP 131
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R +R G K Q P + ++ G VC
Sbjct: 132 HAILDGNVKRTLSRAFAVEGWPGQKTVENQLWQLAEAHTPNTDVDKYNQAMMDMGAMVCT 191
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
KP+C C ++ LC+ KQ
Sbjct: 192 RSKPKCTLCPVAELCQANKQ 211
>gi|125578840|gb|EAZ19986.1| hypothetical protein OsJ_35579 [Oryza sativa Japonica Group]
Length = 474
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH------------ 48
+ S + G + + + + + +L +
Sbjct: 38 LASPSGCRAVPGPTTAAAAVRAE--------LLRWYDANRRDLPWRRAAEPPAGSGSGRG 89
Query: 49 -----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRK 103
+ + V+ ++ Q+ V T + A ++++ +G YR+
Sbjct: 90 EEQRAYAVWVSEVMLQQTRVPVVVDYYSRWMARWPTVDSLAAATQEEVNEMWAGLGYYRR 149
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ I+ T L + GIG A I S+AF VD ++ R+
Sbjct: 150 ARFLLEGAKQIVEKGEFPCTAST---LREVRGIGDYTAGAIASIAFNEVVPVVDGNVVRV 206
Query: 164 SNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
+R P + Q ++ P + + ++ G +C KP C C +
Sbjct: 207 ISRFYAIPDNPKESSTVKRFWQLTGELVDPSRPGDFNQAMMELGATLCSKTKPGCSQCPV 266
Query: 219 SNLCKRI 225
S+ C+ +
Sbjct: 267 SSHCQAL 273
>gi|297473245|ref|XP_002686470.1| PREDICTED: mutY homolog [Bos taurus]
gi|296488961|gb|DAA31074.1| mutY homolog [Bos taurus]
Length = 526
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 80/240 (33%), Gaps = 16/240 (6%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN-----------HFTLI 52
+K+ SP E+ + + K +L + + +
Sbjct: 46 QQKALLQASVSPYHLFRDVAEVTALQESLLDWYDRKKRDLPWRRLVEDEVDLDRRAYAVC 105
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
++ Q+ V + T Q + + +++ +G Y +
Sbjct: 106 FTDVMLQQTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRWLQEGAR 165
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--- 169
++ + LPG+GR A I S+AFG VD ++ R+ R+
Sbjct: 166 KVVEELGGHMPRTAETLQQFLPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLCRVRAIGA 225
Query: 170 --APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +++ P + + + G VC ++P C C + NLC+ ++
Sbjct: 226 DSSSTLVSQHLWSLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCRARQR 285
>gi|167854875|ref|ZP_02477652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis 29755]
gi|167854054|gb|EDS25291.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis 29755]
Length = 381
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 72/197 (36%), Gaps = 7/197 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + ++ ++ Q+ V + + T + ++
Sbjct: 28 QQYGRKHLPWQQNKTLYGVWLSEVMLQQTQVATVIPYFERFIQRFPTIIDLANAPIDEVL 87
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + + +EF + P + L G+GR A +LS P
Sbjct: 88 HLWTGLGYYA-RARNLHKAAQQIRDEFGGQFPTDFADVFALSGVGRSTAGAVLSSVLDAP 146
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ +R G + K R+ P + + ++ G +C
Sbjct: 147 YPILDGNVKRVLSRYFAVEGWSSEKTVENKLWDLTARVTPTSQVADFNQAMMDLGAMICT 206
Query: 208 ARKPQCQSCIISNLCKR 224
KP+C C + C+
Sbjct: 207 RSKPKCFLCPLEKGCQA 223
>gi|317495211|ref|ZP_07953581.1| endonuclease III [Gemella moribillum M424]
gi|316914633|gb|EFV36109.1| endonuclease III [Gemella moribillum M424]
Length = 212
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ ++I +P+ EL + N+ LI+AVLLSAQ D VN+AT LF+ T
Sbjct: 9 KKIKAQQIMEYLDKVFPNVDCELNFSNNLELIIAVLLSAQCKDEYVNRATVSLFKHYKTI 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ +IRT+G+Y+ KS+NI+ ++++L + ++ +IP+T E L LPG+GRK
Sbjct: 69 DDYADARVEDIEKHIRTLGLYKAKSKNIVGMANMLRDVYNYEIPKTREELETLPGVGRKT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+L++ F +P I VDTH+ R++ GLA P +VE+ L+ I P + H+ L+
Sbjct: 129 ANVVLAVGFNVPAIAVDTHVERVAKMFGLADKKDNPLQVEKKLMSIFPMESWGRIHHQLI 188
Query: 200 LHGRY 204
GRY
Sbjct: 189 HLGRY 193
>gi|304415215|ref|ZP_07395924.1| adenine DNA glycosylase [Candidatus Regiella insecticola LSR1]
gi|304282933|gb|EFL91387.1| adenine DNA glycosylase [Candidatus Regiella insecticola LSR1]
Length = 350
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y + + ++ ++ Q+ V + + A ++ + +G Y +
Sbjct: 28 YQTAYPVWLSEIMLQQTQVTTVIPYFQRFITRFPNIASLAAAPLDEVLHLWTGLGYYA-R 86
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ N+ + I++N+ P T E + LPGIGR A ILS+A G +D ++ R+
Sbjct: 87 ARNLHKSAQIIVNQHQGIFPTTFEQIVALPGIGRSTAGAILSLALGQCFPILDGNVKRVL 146
Query: 165 NRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
R G +VEQ L ++ P ++ + ++ G +C +P+C C ++
Sbjct: 147 ARYYAVAGWPGKKEVEQRLWQLSEEVTPTRYVGQFNQAMMDLGATICLRSQPKCNLCPLN 206
Query: 220 NLCKRI 225
C
Sbjct: 207 ADCLAY 212
>gi|253687278|ref|YP_003016468.1| A/G-specific adenine glycosylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753856|gb|ACT11932.1| A/G-specific adenine glycosylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 368
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E + A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVTTVIPYFQRFMERFPNVSALAAAPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P T + + LPG+GR A +LS++ G +D ++ R+
Sbjct: 88 HNLHKAAQTIVSRHGGEFPTTFDEVAALPGVGRSTAGAVLSLSLGQHYPILDGNVKRVLA 147
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC +P+C+ C ++
Sbjct: 148 RCYAVDGWPGKKEVEKKLWARSEEVTPAEGVSQFNQAMMDLGAMVCTRSRPKCELCPLNT 207
Query: 221 LCKRI 225
C
Sbjct: 208 GCMAY 212
>gi|78223180|ref|YP_384927.1| HhH-GPD [Geobacter metallireducens GS-15]
gi|78194435|gb|ABB32202.1| HhH-GPD [Geobacter metallireducens GS-15]
Length = 218
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 6/212 (2%)
Query: 20 YTPKELEEIFYLFSLK---WPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
++ E L + WPSP + N F ++V+ +LS ++ D A++ L
Sbjct: 1 MKDSDIHEAMALLAEAVKSWPSPAVTIVSQREGNPFKVLVSCILSLRTQDRTTGPASERL 60
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +ADTP KML + ++ I +G YR K+ I+ + L++++D ++P L+ L
Sbjct: 61 FGLADTPAKMLFLSSDAIEQAIYPVGFYRNKAAQILDICRTLVDKYDGQVPDDLDELLTF 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+GRK AN++L++ FG I VDTH+ RI NR G KTP + E +L +P K+
Sbjct: 121 RGVGRKTANLVLTLGFGKLAICVDTHVHRICNRWGYTSTKTPAETEFALRAKLPQKYWPV 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +LV G+ C P+C +C++ C R+
Sbjct: 181 INDYLVTFGQNQCTPVSPRCSTCVLVCFCDRV 212
>gi|253751816|ref|YP_003024957.1| A/G-specific adenine glycosylase [Streptococcus suis SC84]
gi|253753639|ref|YP_003026780.1| A/G-specific adenine glycosylase [Streptococcus suis P1/7]
gi|253755480|ref|YP_003028620.1| A/G-specific adenine glycosylase [Streptococcus suis BM407]
gi|251816105|emb|CAZ51728.1| putative A/G-specific adenine glycosylase [Streptococcus suis SC84]
gi|251817944|emb|CAZ55722.1| putative A/G-specific adenine glycosylase [Streptococcus suis
BM407]
gi|251819885|emb|CAR45914.1| putative A/G-specific adenine glycosylase [Streptococcus suis P1/7]
Length = 376
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++++ + + K +L + + + + V+ ++ Q+ V +
Sbjct: 1 MWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLH 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ + +G Y + N+ + ++ +FD + P T ++ L G
Sbjct: 61 HLPTISDLAQAPEEVILKLWEGLGYYS-RVRNMQKAAQQMVEDFDGQFPTTHAAISSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRI-IPPKH 190
IG A I S+AF +P VD ++ R+ +R+ K+ Q+++ + I +
Sbjct: 120 IGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDSER 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ Q +
Sbjct: 180 PGDFNQALMDLGSDIESPVNPRPQDSPVKAF 210
>gi|319937473|ref|ZP_08011878.1| hypothetical protein HMPREF9488_02714 [Coprobacillus sp. 29_1]
gi|319807313|gb|EFW03922.1| hypothetical protein HMPREF9488_02714 [Coprobacillus sp. 29_1]
Length = 342
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + N + + ++ ++ Q+T V T +
Sbjct: 9 LINWYHQYHRQFPWRETENPYFIWISEIMLQQTTTEAVIPYFNRFLTTFPTITDLATASL 68
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G YR ++++I + I++++++ P T + + L GIG A I S+A
Sbjct: 69 EDVYKLWEGLGYYR-RAKHIHETAKIIVHQYNGIFPNTHKEILALKGIGPYTAGAICSIA 127
Query: 149 FGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ +PT +D ++ RI +R L A KT + + ++ + L+ G
Sbjct: 128 YHMPTPAIDGNVLRIISRQYLLKDNIAETKTQKHITSIVAELLMGYDASAFNQGLMDLGA 187
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C+ P+C C I C +
Sbjct: 188 TICRPLNPKCDQCPIQKTCLAYQ 210
>gi|218768410|ref|YP_002342922.1| adenine glycosylase [Neisseria meningitidis Z2491]
gi|93117367|gb|ABE99601.1| MutY [Neisseria meningitidis]
gi|121052418|emb|CAM08753.1| adenine glycosylase [Neisseria meningitidis Z2491]
Length = 349
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|238896493|ref|YP_002921231.1| adenine DNA glycosylase [Klebsiella pneumoniae NTUH-K2044]
gi|238548813|dbj|BAH65164.1| adenine DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 403
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 81 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYA-RA 139
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 140 RNLHKAAQQVATLHGGEFPRTFDEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLA 199
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L + P + + ++ G VC KP+C+ C +SN
Sbjct: 200 RCYAVSGWPGKKEVEKRLWDISEEVTPAEGVERFNQAMMDLGAMVCTRSKPKCELCPLSN 259
Query: 221 LCKRI 225
C
Sbjct: 260 GCVAY 264
>gi|15677257|ref|NP_274410.1| A/G-specific adenine glycosylase [Neisseria meningitidis MC58]
gi|7226635|gb|AAF41760.1| A/G-specific adenine glycosylase [Neisseria meningitidis MC58]
gi|93117353|gb|ABE99594.1| MutY [Neisseria meningitidis H44/76]
gi|325199984|gb|ADY95439.1| A/G-specific adenine glycosylase [Neisseria meningitidis H44/76]
Length = 349
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|320155269|ref|YP_004187648.1| A/G-specific adenine glycosylase [Vibrio vulnificus MO6-24/O]
gi|319930581|gb|ADV85445.1| A/G-specific adenine glycosylase [Vibrio vulnificus MO6-24/O]
Length = 350
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 7/200 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ + + +++ ++ ++ Q+ V + + T + + ++
Sbjct: 13 DAYGRKNLPWQHNKSAYSVWLSEIMLQQTQVATVIPYYQRFLQRFPTVVDLANAEQDEVL 72
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++ ++ + P LE + LPGIGR A +LS P
Sbjct: 73 HLWTGLGYYA-RARNLHKAAKMVAEQYHGEFPLELEQMNALPGIGRSTAAAVLSSVHKQP 131
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R +R G K Q P + ++ G VC
Sbjct: 132 HAILDGNVKRTLSRAFAVEGWPGQKTVENQLWQLAEAHTPNTDVDKYNQAMMDMGAMVCT 191
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
KP+C C ++ LC+ KQ
Sbjct: 192 RSKPKCTLCPVAELCQANKQ 211
>gi|93117361|gb|ABE99598.1| MutY [Neisseria meningitidis]
Length = 349
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|332360476|gb|EGJ38287.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK355]
Length = 385
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 11 MWEADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLN 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + E + L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYERIVSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPRPEDSPVKEF 220
>gi|296125919|ref|YP_003633171.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
gi|296017735|gb|ADG70972.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
Length = 227
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 7/214 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGE-------LYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
++ I + + + + ++++ +LS ++ D A+
Sbjct: 1 MNDNDIHPIMKELTKVTKEMPMPVVTEIKIITNRDAYKILISTMLSLRTKDPTTRDASMR 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
LFE A +P+ ML + E+++ I +G Y+ K++NI+ +S ++I++F K+P ++ L +
Sbjct: 61 LFEKAGSPKDMLKLTEEEIAKLIYPVGFYKVKAKNILEVSKMIIDDFGGKVPDEIDELLK 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
L G+GRK AN++++ AF I VDTH+ RISNR G KTP + E +L +P ++
Sbjct: 121 LKGVGRKVANLVVTEAFDKDGICVDTHVHRISNRFGYVHTKTPEETEFALRDKLPKEYWR 180
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ LV++G+ +CK P C C +S C K
Sbjct: 181 IYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFK 214
>gi|223932320|ref|ZP_03624323.1| A/G-specific adenine glycosylase [Streptococcus suis 89/1591]
gi|223899001|gb|EEF65359.1| A/G-specific adenine glycosylase [Streptococcus suis 89/1591]
Length = 410
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++++ + + K +L + + + + V+ ++ Q+ V +
Sbjct: 35 MWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLH 94
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ + +G Y + N+ + ++ +FD + P T ++ L G
Sbjct: 95 YLPTISDLAQAPEEVILKLWEGLGYYS-RVRNMQKAAQQMVEDFDGQFPTTHAAISSLKG 153
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRI-IPPKH 190
IG A I S+AF +P VD ++ R+ +R+ K+ Q+++ + I P+
Sbjct: 154 IGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDPER 213
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ Q +
Sbjct: 214 PGDFNQALMDLGSDIESPVNPRPQDSPVKAF 244
>gi|93117357|gb|ABE99596.1| MutY [Neisseria meningitidis]
gi|93117363|gb|ABE99599.1| MutY [Neisseria meningitidis]
gi|93117365|gb|ABE99600.1| MutY [Neisseria meningitidis]
Length = 349
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|315425726|dbj|BAJ47382.1| endonuclease III [Candidatus Caldiarchaeum subterraneum]
Length = 217
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 111/211 (52%), Gaps = 3/211 (1%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNH--FTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
++ + ++ + ++ + F ++V +LS ++ D ++A +LF
Sbjct: 1 MDRDAFAQVVEVLKKRYGNEPFPVHVADACAFKVLVGAVLSHRTRDEKTDEAYHNLFTWF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ P+ + + + + I+ +G YR+K++ I L+ I+ + ++P L +LPG+G
Sbjct: 61 NDPRDIASADVRTVARLIKPVGFYRQKAKRIKQLAKIVYGKLGGRVPDNRAELLKLPGVG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHY 196
K A+++LS+AF P I VDTH+ ++ R+G+A GK +V+++L + P ++
Sbjct: 121 PKSADIVLSIAFNRPEIAVDTHVETVAKRLGIADGKAGYEEVKKALTTLSKPDDIRLINH 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V GR +C+ +P+C C I+ C+ ++
Sbjct: 181 LFVKFGREICRRPRPRCSLCPITEYCRYYRE 211
>gi|299135734|ref|ZP_07028918.1| HhH-GPD family protein [Acidobacterium sp. MP5ACTX8]
gi|298601858|gb|EFI58012.1| HhH-GPD family protein [Acidobacterium sp. MP5ACTX8]
Length = 352
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E L + L + + + ++ ++ Q+ V + + T Q +
Sbjct: 20 EFRRLLLGWYREHARVLPWRGIDDPYATWLSEVMLQQTRVATVIERYREFLTRFPTLQAL 79
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A E + +G YR ++ + + ++ E ++P++ L LPG+G A
Sbjct: 80 AAAEENDVLALWSGLGYYR-RARMLHRGAQFVVGELHGEMPRSAAELKALPGVGDYTAAA 138
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKH-------QY 192
I S+AFG VD ++ R+ R+ P G ++ ++ ++P
Sbjct: 139 IASIAFGESVAVVDGNVERVLLRLMGLPEERTGAGRARITKAAQSLVPAAAKRGVGNPPG 198
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ + ++ G +C + P C C + LC+
Sbjct: 199 DHNQAMMELGATICTPKSPLCLQCPVVGLCR 229
>gi|91228697|ref|ZP_01262611.1| A/G-specific adenine glycosylase [Vibrio alginolyticus 12G01]
gi|269965735|ref|ZP_06179832.1| A/G-specific adenine glycosylase [Vibrio alginolyticus 40B]
gi|91187768|gb|EAS74086.1| A/G-specific adenine glycosylase [Vibrio alginolyticus 12G01]
gi|269829603|gb|EEZ83840.1| A/G-specific adenine glycosylase [Vibrio alginolyticus 40B]
Length = 358
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + + ++ + P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAQEVASTYNGEFPLDIEKMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVEGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C +++LC +Q
Sbjct: 189 VCTRSKPKCSLCPVADLCVAKQQ 211
>gi|325285937|ref|YP_004261727.1| A/G-specific adenine glycosylase [Cellulophaga lytica DSM 7489]
gi|324321391|gb|ADY28856.1| A/G-specific adenine glycosylase [Cellulophaga lytica DSM 7489]
Length = 341
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 84/206 (40%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K L + N + + ++ ++ Q+ + T +
Sbjct: 5 QKILDWYTLNKRSLPWRNTVNPYKIWLSEIMLQQTRVAQGTSYYLSFEKHFPTIFDLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+K+ + +G Y ++ N+ + ++N + + P T + L +L G+G A+ I S
Sbjct: 65 SEEKVLKLWQGLGYYS-RARNLHFTAKHIVNNLNGEFPNTYKELVKLKGVGDYTASAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++F VD +++R+ R + + ++ ++ + + + ++
Sbjct: 124 ISFNEQQAVVDGNVYRVLARYYGVDLPINSTEGVKYFKKLATEVMHTSNIRDYNQGIMEF 183
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C +KP C +C +S+ C +++
Sbjct: 184 GALQCSPKKPNCNTCPLSSSCVALEK 209
>gi|298707089|emb|CBJ29881.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 599
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 11/231 (4%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQ 60
++S S LG + +E + SL + L + V+ ++ Q
Sbjct: 132 KRRSTGIASESELG--LKQQRQQEGNDVLSLAVEEEQPSLLKRIPMSAYGTWVSEVMLQQ 189
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V + TP + A +++ +G YR +++ + + ++++
Sbjct: 190 TRVETVIDYYVKWMTLFPTPNDLAAASLEQVNKAWAGLGYYR-RAKMLHEGAKKVVSDHS 248
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK--- 177
+P T + L LPGIG A + S+AFG VD ++ R+ R+ N
Sbjct: 249 GCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAIASDPKNAGLN 308
Query: 178 --VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
I+ P + + L+ G VC + P C +C + C K
Sbjct: 309 KLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAKK 359
>gi|254419950|ref|ZP_05033674.1| A/G-specific adenine glycosylase [Brevundimonas sp. BAL3]
gi|196186127|gb|EDX81103.1| A/G-specific adenine glycosylase [Brevundimonas sp. BAL3]
Length = 344
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ I + L + + + + ++ ++ Q+T + +
Sbjct: 3 DVSLIRSELLAWYDRHARSLAWRAPPGAEARTDPYRVWLSEVMLQQTTTPHATPYFQSFT 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T + + ++ +G Y ++ N+++ + + E P T GL LP
Sbjct: 63 ARWPTVSDLAGAEDGEVMAAWAGLGYYA-RARNLLACARAVAGEHGGVFPDTEAGLLALP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQ 191
G+G A + ++AF P VD ++ R+ R+ P ++ + + +
Sbjct: 122 GVGAYTAAAVAAIAFDRPANVVDGNVERVMARLFAVETPVPAAGPELRRLAGLFVTDERP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G VC+ P C C ++ C
Sbjct: 182 GDWAQALMDLGATVCRPNSPLCGQCPAADQC 212
>gi|329850287|ref|ZP_08265132.1| hhH-GPD superfamily base excision DNA repair family protein
[Asticcacaulis biprosthecum C19]
gi|328840602|gb|EGF90173.1| hhH-GPD superfamily base excision DNA repair family protein
[Asticcacaulis biprosthecum C19]
Length = 354
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 8/215 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + + + +L + + + + ++ ++ Q+T +
Sbjct: 1 MKDAALVSRLRADLLAWYDGHGRDLPWRKGARDPYRVWLSEVMLQQTTTAHAAPYYARFL 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E+ T + A + + +G Y ++ ++ + ++ + + P + L +LP
Sbjct: 61 ELWPTVADLAAADDGAVMAQWAGLGYYA-RARRLLECARAVVRDHGGRFPDREDALLKLP 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQ 191
G G A + ++AF P VD +I R+ R+ P ++V Q+ + + +
Sbjct: 120 GFGPYTAAAVAAIAFDHPANVVDGNIERVMTRLYAIATPLPAGRSEVRQASAQWVMAQRA 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ VC+ + P C C ++ C +
Sbjct: 180 GDWPQALMDLANQVCRPKSPLCLLCPLNAACVAFR 214
>gi|93117359|gb|ABE99597.1| MutY [Neisseria meningitidis]
Length = 349
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|288802970|ref|ZP_06408406.1| A/G-specific adenine glycosylase [Prevotella melaninogenica D18]
gi|288334487|gb|EFC72926.1| A/G-specific adenine glycosylase [Prevotella melaninogenica D18]
Length = 334
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 11/206 (5%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + + ++ ++ Q+ V + T + A
Sbjct: 5 ATLLQWFKNNGRSLPWRETNDAYAIWLSEVILQQTRIVQGMSYWERFMAQWPTVNDLAAA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y + + ++ PQT + L L G+G A I S
Sbjct: 65 TEDEVLKAWQGLGYYSRARNLHTAAQQVVELGGF---PQTFKELKTLKGVGDYTAAAIAS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+AFG P VD +++R+ +R + + + + ++P + + ++
Sbjct: 122 IAFGEPVAVVDGNVYRVLSRYYGIDTPIDSTEGKKEFQALAQSLLPINEPADYNEAIMDF 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C P C +C + C ++
Sbjct: 182 GATQCTPNSPHCSACPLCETCVAFRE 207
>gi|51246315|ref|YP_066199.1| A/G-specific adenine glycosylase [Desulfotalea psychrophila LSv54]
gi|50877352|emb|CAG37192.1| related to A/G-specific adenine glycosylase [Desulfotalea
psychrophila LSv54]
Length = 366
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 9/213 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+L+ + L + + + + ++ ++ Q+ E
Sbjct: 8 ADLDRFQSQLLTWFRLQDRFLPWRQTYDPYHVWISEIMLQQTQMDRGVSYFNRWIERFPQ 67
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + E+++ +G Y ++ N+ + ++ EF ++P ++ L LPGIG
Sbjct: 68 VEAVAEADEQEIFKMWEGLGYYA-RARNLHRAAKKIVEEFAGELPCDIDLLRSLPGIGPY 126
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNA 194
A I S+A I +D ++ RI +R+ +E+ +P +
Sbjct: 127 TAAAIGSVACNIDIPTIDANVARIFSRLFDIDRPVRETQVARAIEKVACDCLPSGRARHW 186
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G VC R P+C C I +C +
Sbjct: 187 NQALMDLGGLVCLPRAPRCTLCPIQEMCLAFAR 219
>gi|315446228|ref|YP_004079107.1| A/G-specific DNA glycosylase [Mycobacterium sp. Spyr1]
gi|315264531|gb|ADU01273.1| A/G-specific DNA glycosylase [Mycobacterium sp. Spyr1]
Length = 291
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 10/199 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + +L + + ++V+ + Q+ V TP A
Sbjct: 7 LIRWYATAQRDLAWRRPGVSAWQILVSEFMLQQTPVARVEPIWLDWVARWPTPSATAAAS 66
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ E + +P ++ L LPG+G A +
Sbjct: 67 AADILRAWGKLGY-PRRAKRLHECATVIATEHGDVVPDDVDTLLTLPGVGTYTARAVACF 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVE--QSLLRIIPPKH-QYNAHYWLVLHGR 203
A+ VDT++ R+ R P + ++P + ++ G
Sbjct: 126 AYRQRVPVVDTNVRRVVARAVHGLHDAGPPSTRDLADVAALLPDDDTAPHFSIAVMELGA 185
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 186 TVCTARAPRCGVCPL-THC 203
>gi|289424282|ref|ZP_06426065.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
SK187]
gi|289428811|ref|ZP_06430491.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
J165]
gi|295129865|ref|YP_003580528.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
SK137]
gi|289154979|gb|EFD03661.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
SK187]
gi|289157812|gb|EFD06035.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
J165]
gi|291376476|gb|ADE00331.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
SK137]
gi|313765246|gb|EFS36610.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL013PA1]
gi|313772840|gb|EFS38806.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL074PA1]
gi|313793137|gb|EFS41204.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL110PA1]
gi|313802775|gb|EFS43993.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL110PA2]
gi|313806430|gb|EFS44937.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL087PA2]
gi|313810979|gb|EFS48693.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL083PA1]
gi|313815282|gb|EFS52996.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL059PA1]
gi|313817461|gb|EFS55175.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL046PA2]
gi|313821955|gb|EFS59669.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL036PA1]
gi|313824149|gb|EFS61863.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL036PA2]
gi|313826516|gb|EFS64230.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL063PA1]
gi|313828697|gb|EFS66411.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL063PA2]
gi|313831745|gb|EFS69459.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL007PA1]
gi|313834374|gb|EFS72088.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL056PA1]
gi|313840059|gb|EFS77773.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL086PA1]
gi|314916101|gb|EFS79932.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL005PA4]
gi|314917022|gb|EFS80853.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL050PA1]
gi|314921298|gb|EFS85129.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL050PA3]
gi|314926615|gb|EFS90446.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL036PA3]
gi|314931040|gb|EFS94871.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL067PA1]
gi|314955008|gb|EFS99414.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL027PA1]
gi|314959047|gb|EFT03149.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL002PA1]
gi|314961320|gb|EFT05421.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL002PA2]
gi|314964549|gb|EFT08649.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL082PA1]
gi|314969649|gb|EFT13747.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL037PA1]
gi|314974715|gb|EFT18810.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL053PA1]
gi|314977089|gb|EFT21184.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL045PA1]
gi|314980336|gb|EFT24430.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL072PA2]
gi|314985511|gb|EFT29603.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL005PA1]
gi|314987335|gb|EFT31426.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL005PA2]
gi|314989122|gb|EFT33213.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL005PA3]
gi|315078435|gb|EFT50466.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL053PA2]
gi|315082100|gb|EFT54076.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL078PA1]
gi|315082757|gb|EFT54733.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL027PA2]
gi|315086116|gb|EFT58092.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL002PA3]
gi|315087700|gb|EFT59676.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL072PA1]
gi|315097346|gb|EFT69322.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL038PA1]
gi|315099451|gb|EFT71427.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL059PA2]
gi|315102044|gb|EFT74020.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL046PA1]
gi|315110130|gb|EFT82106.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL030PA2]
gi|327331368|gb|EGE73107.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL096PA2]
gi|327333355|gb|EGE75075.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL096PA3]
gi|327445628|gb|EGE92282.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL013PA2]
gi|327447250|gb|EGE93904.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL043PA1]
gi|327449717|gb|EGE96371.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL043PA2]
gi|327454567|gb|EGF01222.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL087PA3]
gi|327456639|gb|EGF03294.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL083PA2]
gi|327457084|gb|EGF03739.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL092PA1]
gi|328755622|gb|EGF69238.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL087PA1]
gi|328756702|gb|EGF70318.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL025PA2]
gi|328758368|gb|EGF71984.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL020PA1]
gi|328761891|gb|EGF75401.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL099PA1]
gi|332674705|gb|AEE71521.1| A/G-specific adenine glycosylase [Propionibacterium acnes 266]
Length = 291
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 11/209 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + + +L + + ++V+ ++S Q+ V TP
Sbjct: 9 QVIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWMNRWPTPDD 68
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G R+ + S + + E D +P + + L LPGIG A+
Sbjct: 69 LAEEDSGEAVAAWGRLGYPRRALR-LHSCAVAIATEHDGVVPNSYDELVALPGIGDYTAS 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPK--HQYNAHY 196
++S AFG +DT++ R+ R P V ++ ++P +
Sbjct: 128 AVVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERVVADALVPDEDVRAAKWAV 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC AR PQC+ C I + C+ +
Sbjct: 188 ASMELGALVCTARSPQCEVCPIRDSCRWV 216
>gi|170097299|ref|XP_001879869.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645272|gb|EDR09520.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 562
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 74/194 (38%), Gaps = 16/194 (8%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V E T + + + ++ + +G Y + S
Sbjct: 124 AYEVWVSEIMLQQTQVATVIPYYTRWMEKYPTIRHLASANVDQVNALWKGLGYYSRASRL 183
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ + E +PGIGR A I S+A+G +D ++ R+ +R+
Sbjct: 184 LAGAQKAIQKYGGRLPDNAKEMEANIPGIGRYSAGAICSIAYGEKVPVLDGNVHRLLSRV 243
Query: 168 GLAPGKT---------------PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
++E++ PP++ + + L+ G VCK R P+
Sbjct: 244 LALHAPPKAKSTLDILWDAATVMVQIEEADTTS-PPQYAGDINQALIELGSTVCKVRDPE 302
Query: 213 CQSCIISNLCKRIK 226
C +C I N C +
Sbjct: 303 CGTCPIQNWCSAYQ 316
>gi|296166645|ref|ZP_06849071.1| probable A/G-specific adenine glycosylase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897980|gb|EFG77560.1| probable A/G-specific adenine glycosylase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 306
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 78/214 (36%), Gaps = 12/214 (5%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKA 69
P + P+ + + + +L + + ++V+ + Q+ V
Sbjct: 8 MPHSPVNGPERIS--VTNLLDWYDGSRRDLPWREPGVSAWQILVSEFMLQQTPVSRVLPI 65
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
TP A + +G ++++ + + ++ + + +P ++
Sbjct: 66 WSEWVRRWPTPSATAAATAADVLRAWGKLGY-PRRAKRLHECATVIARDHHDVVPDDVDT 124
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG--LAPGKTPNKVE--QSLLRI 185
L LPGIG A I A+ P VDT++ R+ R LA G + + +
Sbjct: 125 LLTLPGIGGYTARAIACFAYRQPVPVVDTNVRRVVARAVRGLADGGPASAARDHADVAAL 184
Query: 186 IPPK-HQYNAHYWLVLHGRYVCKARKPQCQSCII 218
+P L+ G VC AR P+C C +
Sbjct: 185 LPSNGTAPKFSVALMELGATVCTARAPRCGLCPL 218
>gi|241889851|ref|ZP_04777149.1| endonuclease III [Gemella haemolysans ATCC 10379]
gi|241863473|gb|EER67857.1| endonuclease III [Gemella haemolysans ATCC 10379]
Length = 214
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +++ +P + EL + N+ L++AVLLSAQ D VN+AT LFE T
Sbjct: 9 KKNKAKKVMEYLDKVFPDVECELDFSNNLELVIAVLLSAQCKDEYVNRATVGLFENYKTI 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ YIRT+G+Y+ KS+NI+ ++++L + +D KIPQT E L +LPG+GRK
Sbjct: 69 DDYADAKVEDIEKYIRTLGLYKAKSKNIVGMANMLRDVYDYKIPQTREELEKLPGVGRKT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS+ F IP I VDTH+ R++ GLA +P +VE++L+ + P + H+ L+
Sbjct: 129 ANVVLSVGFNIPAIAVDTHVERVAKMFGLAELTDSPLQVEKNLMSVFPMESWGKIHHQLI 188
Query: 200 LHGRY 204
GRY
Sbjct: 189 HLGRY 193
>gi|325144671|gb|EGC66969.1| A/G-specific adenine glycosylase [Neisseria meningitidis
M01-240013]
Length = 349
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 87/219 (39%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQALAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKH 190
+GR A I + +F +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 VGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 191 QYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
Length = 481
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 7/207 (3%)
Query: 25 LEEIFYLFSLK---WPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ + + + + P +L + F ++VA +LSA++ D A + LF A
Sbjct: 5 IDTVIPILEREVSSYDVPVVDLIATQTNDPFKVLVATILSARTKDEVTAAAARRLFARAS 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T ++ + ++ I +G +R K++++ L L +P ++ L +LPG+GR
Sbjct: 65 TAAELATLTVADVEQLIYPVGFFRTKAKHLGELPGALQRFGGV-VPDDIDSLVQLPGVGR 123
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN+++++AF P I VDTH+ RI N G TP + E L + +P ++ + L
Sbjct: 124 KTANLVVAVAFHKPAICVDTHVHRIMNIWGYVQTTTPLQTEMVLRQKLPRQYWIRINGLL 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
V G+ CK ++P C C+I+ C R+
Sbjct: 184 VAFGQGTCKPQRPHCDRCVIAAYCPRL 210
>gi|313884905|ref|ZP_07818657.1| putative endonuclease III [Eremococcus coleocola ACS-139-V-Col8]
gi|312619596|gb|EFR31033.1| putative endonuclease III [Eremococcus coleocola ACS-139-V-Col8]
Length = 203
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K + +P + +L Y N F L+VA++LSA+++D + K T LF
Sbjct: 2 VLSDKAAYDFLQKIMKLYPQAQPQLIYENAFQLVVALILSARTSDQALAKITPTLFTRYP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + +++ YI IG+Y +K++ + IL+++F+ ++P T + L +L GIGR
Sbjct: 62 TPADLAQSKPTEIEAYINQIGLYHQKAKYLYQTGQILVDQFEGQVPATRDDLMKLAGIGR 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K AN++L AF IP VD+HI RI+ L PG + K+E + +++ +AH
Sbjct: 122 KSANLVLLKAFNIPAFAVDSHIQRIAYHHSLVSPGASLLKIENRVCQLLEADQWGHAHQA 181
Query: 198 LVLHGRYVCKA--RKPQCQSCI 217
++ GR+ C+ R C +C
Sbjct: 182 MIEFGRHHCRPGGRG-DCLTCF 202
>gi|119719909|ref|YP_920404.1| HhH-GPD family protein [Thermofilum pendens Hrk 5]
gi|119525029|gb|ABL78401.1| HhH-GPD family protein [Thermofilum pendens Hrk 5]
Length = 253
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ EE+ + + + + + + ++ L ++ V K + F
Sbjct: 36 EEYFEEVARRLAEWYRRRGRDFPWRHTRDPYVILATEFLLQRTRAETVAKVFEEFFSRYP 95
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+P+ + ++L+ + +G+ ++++ + + ++ +P++ E L +L G+G
Sbjct: 96 SPESLANADPEELRKFFSRLGL-VRRADALREAAREIVERHGGSVPRSKEELLKLKGVGP 154
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
A+ +L A+ P VDT++ R+ A + + E L R++ + L
Sbjct: 155 YIASAVLCFAYSAPVPVVDTNVERVL--GRAAGASSREEAEAFLERLLRHGNPREISLAL 212
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ G VC RKP+C C +S+LC
Sbjct: 213 IDLGALVCT-RKPKCPECPLSDLCSY 237
>gi|291618788|ref|YP_003521530.1| MutY [Pantoea ananatis LMG 20103]
gi|291153818|gb|ADD78402.1| MutY [Pantoea ananatis LMG 20103]
Length = 393
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 61 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPDVSDLAAAPLDEVLHLWTGLGYYA-RA 119
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P+ + + LPG+GR A ILS++ G+ +D ++ R+
Sbjct: 120 RNLHKAAKQVVDLHGGEFPRHYDEVAALPGVGRSTAGAILSLSLGLHFPILDGNVKRVLA 179
Query: 166 RIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE+ L +I P + + ++ G VC +P+C C +++
Sbjct: 180 RCYAVGGWPGKKDVEKRLWQISEEVTPAQGVSQFNQAMMDLGAMVCTRSRPKCDICPLNS 239
Query: 221 LCKR 224
C+
Sbjct: 240 GCEA 243
>gi|317058686|ref|ZP_07923171.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313684362|gb|EFS21197.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 365
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 19 LYTPKE----LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
+ + + +I + K +L + + ++ ++ Q+ V
Sbjct: 1 MRKIERTWCEMGKIAKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFA 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + + E+KL + +G Y ++ N+ + ++ + ++P+ + L
Sbjct: 61 RFIEELPNIEALANCEEEKLMKLWQGLGYYS-RARNLKKAACQIMEMYGGELPKEKKELL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRII 186
L GIG A I S+A+G VD ++ R+ +R+ G K+E+ + +
Sbjct: 120 HLAGIGPYTAGAISSIAYGKKETAVDGNVIRVMSRLFAVEGNVLEGKGRQKIEELTYQEL 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
P + + L+ G +C C C + C+
Sbjct: 180 PEDRAGDFNQALMDLGATICIPNGAALCHLCPLHLECQA 218
>gi|317049440|ref|YP_004117088.1| A/G-specific adenine glycosylase [Pantoea sp. At-9b]
gi|316951057|gb|ADU70532.1| A/G-specific adenine glycosylase [Pantoea sp. At-9b]
Length = 361
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVADLAAAPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++ + P+ + + LPG+GR A ILS++ G+ +D ++ R+
Sbjct: 88 RNLHKAAKQVVDKHAGEFPRNFDDVAALPGVGRSTAGAILSLSLGLHFPILDGNVKRVLA 147
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE+ L +I P + + ++ G VC +P+C+ C +++
Sbjct: 148 RCYAVAGWPGKKEVEKRLWQISEEVTPAQGVSQFNQAMMDLGALVCTRSRPKCEICPLNS 207
Query: 221 LCKRI 225
C
Sbjct: 208 GCVAY 212
>gi|15595090|ref|NP_212879.1| endonuclease III (nth) [Borrelia burgdorferi B31]
gi|2688678|gb|AAC67089.1| endonuclease III (nth) [Borrelia burgdorferi B31]
Length = 222
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
++P K L Y N++ L++ V+LSA++TD VNK + +LFE + + + + ++
Sbjct: 31 RYPDVKPFLNYKNNYELLIMVILSARTTDNLVNKISPYLFERYENFESLSRANVRDVEKL 90
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I G Y +K++NI++ S ++ +F+ IP + L +LPG+GRK ANVIL + P I
Sbjct: 91 IYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVYNKPAI 150
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH R+ R L+ +P K+E L R I P QY + H R +C +R C
Sbjct: 151 IVDTHFSRVITRHALSLESSPIKIELDLKRRIKPCKQYRFSMAINKHAREICTSRNVNCD 210
Query: 215 SCIISNLCKRI 225
+C + R+
Sbjct: 211 NCFLEKFAPRV 221
>gi|326336221|ref|ZP_08202393.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691730|gb|EGD33697.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 351
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ + + + K +L + N + + ++ ++ Q+ + + T
Sbjct: 3 EDFADFSKILLQWYGIHKRDLPWRGVKNPYYVWLSEVILQQTRISQGLPYYLNFIKNFPT 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + E+K+ + +G Y +++N+ + + +E P T + L L G+G
Sbjct: 63 IQALAEASEEKIFKVWQGLGYYS-RAKNLHLAAKYITDELQGVFPMTYDKLLLLKGVGDY 121
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNA 194
A+ I S+ F P VD +++R+ +RI + + +Q ++ K
Sbjct: 122 TASAIASICFNEPKATVDGNVYRVLSRIFDIELPINSSEGIKYFKQLATCLLDKKRAGEY 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G CK + P C C+++ C K
Sbjct: 182 NQAIMDFGAIQCKPQSPNCSQCVMNGKCLAYK 213
>gi|70733862|ref|YP_257502.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens Pf-5]
gi|68348161|gb|AAY95767.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens Pf-5]
Length = 355
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 10/210 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E + + +L + N + + V+ ++ Q+ V T
Sbjct: 2 RAEAFSTAVLDWYDRHGRHDLPWQQDINPYRVWVSEIMLQQTQVSTVLNYFDRFMASLPT 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + E ++ + +G Y ++ N+ + I++ E+ + P+ +E LT LPGIG
Sbjct: 62 VQALAEAPEDEVLHLWTGLGYYT-RARNLQKTAKIVMAEYGGEFPRDVEKLTELPGIGLS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A I S++ G+ +D ++ R+ R G ++ + R P +
Sbjct: 121 TAGAIASISMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWAAAERFTPHSRVNHY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C KP C C + C+
Sbjct: 181 TQAMMDLGATLCTRSKPSCLLCPLERGCEA 210
>gi|317486547|ref|ZP_07945370.1| A/G-specific adenine glycosylase [Bilophila wadsworthia 3_1_6]
gi|316922222|gb|EFV43485.1| A/G-specific adenine glycosylase [Bilophila wadsworthia 3_1_6]
Length = 370
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 10/214 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + + L + + +A ++ Q+ + E
Sbjct: 1 MNDTQRFTLFRKDLLRWFAENRRPLPWRADYTPYRTWIAEVMMQQTQMDRGVQYFLRWME 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ A E+ L +G YR ++ NI + + +++ P + + LPG
Sbjct: 61 RFPDVAAVAAAPEEDLLKAWEGLGYYR-RARNIQAAARVIMERHGGNFPTSYADILALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
+G A I S A+ VD ++ R+ +R+ + + + +IP
Sbjct: 120 VGPYTAGAIASTAYNEEVPCVDGNVERVLSRVFDIDTPVKEEPAKSRIRELAQALIPKGE 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
N + L+ G VC+ +KP+C+ C ++ LC+
Sbjct: 180 ARNFNQGLMELGALVCR-KKPECERCPLAGLCES 212
>gi|227357870|ref|ZP_03842218.1| A/G-specific adenine glycosylase [Proteus mirabilis ATCC 29906]
gi|227161980|gb|EEI46998.1| A/G-specific adenine glycosylase [Proteus mirabilis ATCC 29906]
Length = 346
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ ++ + K+ + + ++ ++ Q+ V +
Sbjct: 1 MMEAQQFSQVVLDWYHKYGRKTLPWQQEKTPYHVWLSEVMLQQTQVATVIPYFERFIARF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + +G Y ++ N+ + ++++ + P T E + LPG+G
Sbjct: 61 PNVSALAKAPLDEVLHLWTGLGYYA-RARNLHKAAQHIVDKHQGQFPDTFEDVCALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ P +D ++ R+ R G + +VE L I P K
Sbjct: 120 RSTAGAILSLSLKKPYPILDGNVKRVLARCYAVEGWSGKKEVENKLWEISEQVTPTKGVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 YFNQAMMDLGAMVCTRTKPKCELCPLNTGCIAY 212
>gi|197284227|ref|YP_002150099.1| adenine DNA glycosylase [Proteus mirabilis HI4320]
gi|194681714|emb|CAR40854.1| A/G-specific adenine glycosylase [Proteus mirabilis HI4320]
Length = 346
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ ++ ++ + K+ + + ++ ++ Q+ V +
Sbjct: 1 MMDAQQFSQVVLDWYHKYGRKTLPWQQEKTPYHVWLSEVMLQQTQVATVIPYFERFIARF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + +G Y ++ N+ + ++++ + P T E + LPG+G
Sbjct: 61 PNVSALAKAPLDEVLHLWTGLGYYA-RARNLHKAAQHIVDKHQGQFPDTFEDVCALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ P +D ++ R+ R G +VE L I P K
Sbjct: 120 RSTAGAILSLSLKKPYPILDGNVKRVLARCYAVEGWPGKKEVENKLWEISEQVTPTKGVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 YFNQAMMDLGAMVCTRTKPKCELCPLNTGCIAY 212
>gi|148545561|ref|YP_001265663.1| A/G-specific adenine glycosylase [Pseudomonas putida F1]
gi|148509619|gb|ABQ76479.1| A/G-specific DNA-adenine glycosylase [Pseudomonas putida F1]
Length = 355
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + E
Sbjct: 12 DWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + +++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAAKVVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R+ P + + ++ G
Sbjct: 131 GIRAPILDGNVKRVLARYTAQAGYPGEPKVANQLWATAERLTPQQRANHYTQAMMDMGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLICPLQRGCEA 210
>gi|327395119|dbj|BAK12541.1| A/G-specific adenine glycosylase MutY [Pantoea ananatis AJ13355]
Length = 393
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + A ++ + +G Y ++
Sbjct: 61 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPDVSDLAAAPLDEVLHLWTGLGYYA-RA 119
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + P+ + + LPG+GR A ILS++ G+ +D ++ R+
Sbjct: 120 RNLHKAAKQVVDLHGGEFPRHYDEVAALPGVGRSTAGAILSLSLGLHFPILDGNVKRVLA 179
Query: 166 RIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE+ L +I P + + ++ G VC +P+C C +++
Sbjct: 180 RCYAVGGWPGKKDVEKRLWQISEEVTPAQGVSQFNQAMMDLGAMVCTRSRPKCDICPLNS 239
Query: 221 LCKR 224
C+
Sbjct: 240 GCEA 243
>gi|330812778|ref|XP_003291295.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
gi|325078545|gb|EGC32191.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
Length = 710
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V LLS+Q+ D + A L E + +L +KL+ I +G YR+K+ +
Sbjct: 514 FHILVGCLLSSQTKDQVTHAAMVRLKEYGLNVETVLKTPNEKLETLIHPVGFYRRKAVYL 573
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
S++ IL +++ IP T + + LPGIG K N+I+ +A+G I VD H+ RI NR+
Sbjct: 574 KSIAEILKEKYNGDIPPTFKEIEALPGIGPKMTNLIVQIAWGRVEGIAVDVHMHRICNRL 633
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G TP + + L +P + ++ LV G+ +C +P+C SC ++NLC
Sbjct: 634 GWVKTNTPEETMRQLESWLPREKWGQVNHLLVGFGQTICDPVRPKCSSCTVNNLCP 689
>gi|121635099|ref|YP_975344.1| adenine glycosylase [Neisseria meningitidis FAM18]
gi|120866805|emb|CAM10561.1| adenine glycosylase [Neisseria meningitidis FAM18]
Length = 349
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|93117355|gb|ABE99595.1| MutY [Neisseria meningitidis]
Length = 349
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK- 189
+GR A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 VGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSEN 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 ADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|22537854|ref|NP_688705.1| A/G-specific adenine glycosylase [Streptococcus agalactiae 2603V/R]
gi|22534749|gb|AAN00578.1|AE014269_22 A/G-specific adenine glycosylase [Streptococcus agalactiae 2603V/R]
Length = 374
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWPEDRIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|238854628|ref|ZP_04644958.1| endonuclease III [Lactobacillus jensenii 269-3]
gi|282932981|ref|ZP_06338378.1| endonuclease III [Lactobacillus jensenii 208-1]
gi|238832418|gb|EEQ24725.1| endonuclease III [Lactobacillus jensenii 269-3]
gi|281303016|gb|EFA95221.1| endonuclease III [Lactobacillus jensenii 208-1]
Length = 213
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L +E ++ +P KGEL + F L+ AV +SAQ+TD VN+ T LF
Sbjct: 11 LLNDEEALKVLNQILAMYPDAKGELNWDTVFHLVCAVAISAQTTDKMVNRVTPKLFSDYP 70
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M K L+ I IG++R K++++ ++ +L+ F ++P+ + L LPG+G
Sbjct: 71 TPAAMAKADIKDLEADISKIGLFRSKAKHLKEMAQMLVENFGGEVPKDKKLLMTLPGVGE 130
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ A+G+P I VDTH+ RIS + + P P+++E+ L I+P + H+
Sbjct: 131 KTANVVLAEAYGVPAIAVDTHVARISKKFKIVPENAKPHEIEKRLEEILPKEQWIKTHHA 190
Query: 198 LVLHGRYVCKAR 209
++ GRY AR
Sbjct: 191 MIFFGRYTMPAR 202
>gi|296271365|ref|YP_003653997.1| HhH-GPD family protein [Thermobispora bispora DSM 43833]
gi|296094152|gb|ADG90104.1| HhH-GPD family protein [Thermobispora bispora DSM 43833]
Length = 287
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 9/197 (4%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + + ++V+ ++ Q+ V V A TP+ +
Sbjct: 11 DWYEAHRRDLPWRRPDATPWGILVSEIMLQQTPVVRVLPAWTEWMARWPTPEALAKEPPG 70
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ N+ + + ++ E ++P T L LPG+G A + S AF
Sbjct: 71 EAVRQWGRLGYPRRAL-NLHACAKVITAEHGGRVPSTYAELRALPGVGDYTAAAVASFAF 129
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQYNAHYWLVLHGRYV 205
G +DT++ R+ R P + ++P ++ G V
Sbjct: 130 GGRHAVLDTNVRRVLARAIRGEEHPPRATTAAERRLAESLVPEVEAPRWAVAVMELGALV 189
Query: 206 CKARKPQCQSCIISNLC 222
C AR P+C++C I+ C
Sbjct: 190 CTARAPRCEACPIAGQC 206
>gi|124026785|ref|YP_001015900.1| adenine glycosylase [Prochlorococcus marinus str. NATL1A]
gi|123961853|gb|ABM76636.1| probable adenine glycosylase [Prochlorococcus marinus str. NATL1A]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 11/191 (5%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + +A ++ Q+ V K + T + + L + +G Y +
Sbjct: 44 SPYGIWIAEVMLQQTQLKVVIPYWKKWMKFFPTLSSLAEADLENLLMIWQGLGYYSRAKR 103
Query: 107 NIISLSHIL------INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
S ++ ++ + P ++ LPGIGR A I+S AF +PT +D ++
Sbjct: 104 IHQSSKILVEFVGKNRDQDPDSWPNQIDKWMSLPGIGRSTAGSIISSAFDLPTPILDGNV 163
Query: 161 FRISNRIGLAPGKTPNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
RI +R+ LA + K E+ L +I + + L+ G +C KP C SC
Sbjct: 164 KRILSRL-LAIERKSIKDERKLWEFSSLLIERLSPRDFNQALMDLGAIICTPTKPSCSSC 222
Query: 217 IISNLCKRIKQ 227
+ N C +
Sbjct: 223 PLQNFCVAYTK 233
>gi|281425414|ref|ZP_06256327.1| A/G-specific adenine glycosylase [Prevotella oris F0302]
gi|281400407|gb|EFB31238.1| A/G-specific adenine glycosylase [Prevotella oris F0302]
Length = 336
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 78/214 (36%), Gaps = 11/214 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + L + N + + ++ ++ Q+ V E
Sbjct: 2 KQNISLFTSTLLAWYRTNGRNLPWRNTQDPYAIWLSEIILQQTRIVQGMDYWLRFMEKWP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A E ++ + +G Y + + I+ P TL+G+ RL G+G
Sbjct: 62 CVEDLAAAKEDEVMRMWQGLGYYSRARNLHKAAQQIVALGHF---PNTLDGIKRLKGVGD 118
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYN 193
A I S AFG+ VD + +R+ +R + + +P +
Sbjct: 119 YTAAAIGSFAFGLQVASVDGNFYRVLSRYFGIDTPINTTEGIKLFAALAQEHLPQGAAAD 178
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C + PQC+ C ++ C ++
Sbjct: 179 YNQAVMDFGATQCTPKSPQCEVCPLAETCVARRK 212
>gi|161870270|ref|YP_001599440.1| A/G-specific adenine glycosylase [Neisseria meningitidis 053442]
gi|161595823|gb|ABX73483.1| A/G-specific adenine glycosylase [Neisseria meningitidis 053442]
Length = 349
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 87/219 (39%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKH 190
+GR A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 VGRSTAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENTLWTLAESLLPSEN 179
Query: 191 --QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 AEMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 218
>gi|71281992|ref|YP_270802.1| A/G-specific adenine glycosylase [Colwellia psychrerythraea 34H]
gi|71147732|gb|AAZ28205.1| A/G-specific adenine glycosylase [Colwellia psychrerythraea 34H]
Length = 362
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E T + E + ++ +G Y ++
Sbjct: 37 KTPYRVWISEIMLQQTQVATVIPYYQRFMESFPTITDLANADEDVVLHHWTGLGYYA-RA 95
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I++N++D P +E + LPGIGR A ILS++ +D ++ R+
Sbjct: 96 RNLHKSAKIMLNDYDGHFPIEIEQVIALPGIGRSTAGAILSLSLKQYHPILDGNVKRVLA 155
Query: 166 RIGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R L G + Q ++ P + + ++ G VC KP C C +
Sbjct: 156 RSYLVEGYNGLSKFDKALWQLSEKLTPAIETDSFNQAMMDLGATVCTRSKPSCDICPVEQ 215
Query: 221 LC 222
C
Sbjct: 216 SC 217
>gi|294139801|ref|YP_003555779.1| A/G-specific adenine glycosylase [Shewanella violacea DSS12]
gi|293326270|dbj|BAJ01001.1| A/G-specific adenine glycosylase [Shewanella violacea DSS12]
Length = 361
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T + + ++ +Y +G Y ++
Sbjct: 36 KTPYKVWVSEIMLQQTQVSTVIPYYLKFMDRFPTIDSLADAPQDEVLHYWTGLGYYA-RA 94
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ +E D+ P+ E + LPGIGR A +LS+A +D ++ R+
Sbjct: 95 RNLHKSAQLIRDEHDSTFPRDFEDVLSLPGIGRSTAGAVLSLALAQHHAILDGNVKRVLA 154
Query: 166 RIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G G K VE L ++ P + ++ G +C +P C C ++
Sbjct: 155 RHGAIDGWPGKKPVENKLWDLTEKLTPNLDVQKYNQAMMDIGASICSRSRPICSDCPVAI 214
Query: 221 LCKR 224
C+
Sbjct: 215 DCQA 218
>gi|66818201|ref|XP_642760.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
gi|60470837|gb|EAL68809.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
Length = 349
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V LLS+Q+ D + A L E T KML I +L+ + +G Y++K+ +
Sbjct: 155 FHILVGCLLSSQTKDAITHAAVVRLKEYGLTVDKMLTIDTNELETLLYPVGFYKRKAIYL 214
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ IL N+++ IP T + + +LPGIG K N+I+ +A+G VD H+ RISNR+
Sbjct: 215 KKIAEILKNKYNGDIPPTFKEIEQLPGIGPKMTNLIVQIAWGRVEGIAVDVHMHRISNRL 274
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G KTP + + L +P ++ ++ LV G+ +C P+C +C+++NLC
Sbjct: 275 GWVKTKTPEETMKDLESWLPKENWATVNHLLVGFGQTICSPVNPKCSNCLVNNLCP 330
>gi|312138090|ref|YP_004005426.1| hhh-gpd family DNA repair protein [Rhodococcus equi 103S]
gi|311887429|emb|CBH46741.1| HhH-GPD family DNA repair protein [Rhodococcus equi 103S]
Length = 296
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 11/199 (5%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ +L + + ++++ ++ Q+ V V + P M A
Sbjct: 9 AALLRWYDEQARDLPWRRDGVTAWHILMSEIMLQQTPVVRVAPIWEEWVRRWPVPSLMAA 68
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + +G R+ + + +L +E D+ +P ++ L LPGIG A +
Sbjct: 69 SSQADVLRAWGKLGYPRRALR-LHECAGVLASEHDDVVPADVDVLLSLPGIGDYTARAVA 127
Query: 146 SMAFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPP--KHQYNAHYWLV 199
A+G VDT++ R+ R G A P+ + ++P + L+
Sbjct: 128 CFAYGQRVPVVDTNVRRVVARAVHGRADQGNPSAKRDMADVDALLPRTRERAARFSAALM 187
Query: 200 LHGRYVCKARKPQCQSCII 218
G +C AR P C +C +
Sbjct: 188 ELGATICTARTPDCANCPL 206
>gi|145640844|ref|ZP_01796426.1| A/G-specific adenine glycosylase [Haemophilus influenzae R3021]
gi|145274358|gb|EDK14222.1| A/G-specific adenine glycosylase [Haemophilus influenzae 22.4-21]
Length = 240
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P H + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTTHVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|306826726|ref|ZP_07460028.1| A/G-specific adenine glycosylase [Streptococcus pyogenes ATCC
10782]
gi|304431015|gb|EFM34022.1| A/G-specific adenine glycosylase [Streptococcus pyogenes ATCC
10782]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|257466065|ref|ZP_05630376.1| A/G-specific adenine glycosylase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917221|ref|ZP_07913461.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691096|gb|EFS27931.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 365
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 19 LYTPKE----LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
+ + + +I + K +L + + ++ ++ Q+ V
Sbjct: 1 MRKIERTWCEMGKIAKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFA 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + + E+KL + +G Y ++ N+ + ++ + ++P+ + L
Sbjct: 61 RFIEELPNIESLANCEEEKLMKLWQGLGYYS-RARNLKKAACQIVEFYGGELPKEKKELL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRII 186
L GIG A I S+A+G VD ++ R+ +R+ G K+E+ + +
Sbjct: 120 HLAGIGPYTAGAISSIAYGKKETAVDGNVIRVMSRLFAVDGNVLEGKGRQKIEELTYQEL 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
P + + L+ G +C C C + C+
Sbjct: 180 PEDRAGDFNQALMDLGATICIPNGAALCHLCPLHLECQA 218
>gi|209559927|ref|YP_002286399.1| A/G-specific adenine glycosylase [Streptococcus pyogenes NZ131]
gi|209541128|gb|ACI61704.1| A/G-specific adenine glycosylase [Streptococcus pyogenes NZ131]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|237712329|ref|ZP_04542810.1| A/G-specific adenine glycosylase [Bacteroides sp. 9_1_42FAA]
gi|237726465|ref|ZP_04556946.1| A/G-specific adenine glycosylase [Bacteroides sp. D4]
gi|229434991|gb|EEO45068.1| A/G-specific adenine glycosylase [Bacteroides dorei 5_1_36/D4]
gi|229453650|gb|EEO59371.1| A/G-specific adenine glycosylase [Bacteroides sp. 9_1_42FAA]
Length = 352
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 13/207 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + N + + ++ ++ Q+ +
Sbjct: 1 MENFSRKLIDWYRENGRDLPWRRTKNPYLIWISEIILQQTRVAQGYDYYQRFVTRFPDVF 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P T G+ L G+G A
Sbjct: 61 ALAAADEDEVMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYAGVRALKGVGEYTA 117
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE------QSLLRIIPPKHQYNAH 195
I S A+ +P VD +++R+ +R L + E + ++ + +
Sbjct: 118 AAICSFAYDMPYAVVDGNVYRVLSRW-LGIDTPIDSTEGKKLFVRIADELLDCECPGLYN 176
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P C C +S+ C
Sbjct: 177 QAIMDFGALQCTPVAPDCLFCPLSDSC 203
>gi|159900913|ref|YP_001547160.1| HhH-GPD family protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893952|gb|ABX07032.1| HhH-GPD family protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 323
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + N + ++V+ + Q+ V + + T + + +
Sbjct: 11 LLAWFQANGRDLPWRRTRNPYYILVSETMLQQTQVDRVIPKYEAFLALFPTVEALASAST 70
Query: 89 KKLQNYIRTIGIYR---KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + +G R ++ P T EGL LPGIG + +
Sbjct: 71 ADVIRSWQGLGYNRRAVNLQRAAQAIVAAGYPADPAGFPATPEGLRNLPGIGAYTSGAVA 130
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLVL 200
AF +DT+I R+ R+ + P P + + ++IP + + ++
Sbjct: 131 CFAFERDVAFLDTNIRRVVRRLLVGPEDAPPETNEQTLIDYAQQLIPQGQGWAWNQAIME 190
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G +C A KPQC C ++ C+
Sbjct: 191 LGALICSAAKPQCWRCPVNQHCRAY 215
>gi|253990765|ref|YP_003042121.1| adenine DNA glycosylase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211639096|emb|CAR67708.1| A/G-specific adenine glycosylase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782215|emb|CAQ85379.1| A/G-specific adenine glycosylase [Photorhabdus asymbiotica]
Length = 346
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 82/213 (38%), Gaps = 7/213 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ K+ ++ + + + + ++ ++ Q+ V +
Sbjct: 1 MIEAKQFSKVVLDWYHLYGRKTLPWQLEKTSYHVWLSEVMLQQTQVATVIPYFQRFISRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A ++ + +G Y ++ N+ + + + + P T + + LPG+G
Sbjct: 61 PDVVSLAAAPLDEVLHLWTGLGYYA-RARNLHKAAQQIAERYHGEFPTTFDDVVALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQY 192
R A ILS++ G +D ++ R+ R G +VE SL +I P K
Sbjct: 120 RSTAGAILSLSQGKHFPILDGNVKRVLARCYAMEGWPGKKEVENSLWQISTNVTPAKEVE 179
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 YFNQAMMDLGAMVCTRSKPKCEICPLNQGCIAY 212
>gi|220903350|ref|YP_002478662.1| A/G-specific adenine glycosylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867649|gb|ACL47984.1| A/G-specific adenine glycosylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 435
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 85/216 (39%), Gaps = 10/216 (4%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATK 71
P L K + + + + L + N + + ++ ++ Q+ +
Sbjct: 41 PPRHLPPEKHIPALQNALLDWFAVHQRALPWRNSYTPYEVWISEVMLQQTQMERGVRYFI 100
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + A E+ + +G Y ++ +I++ + ++ E + P+ +
Sbjct: 101 RWMERFPDIAALAAAHEEDVLRMWEGLGYYS-RARHILAAARKIMAEHNGIFPRDPAAIR 159
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRII 186
LPG+G A I S+AF VD ++ R+ +RI + + Q LR++
Sbjct: 160 ALPGVGPYTAGAIASIAFEKKLPCVDANVERVVSRIFDVDSPVKQEPAAGVIHQWALRLV 219
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P + ++ G VC+ +KP C SC + C
Sbjct: 220 PEGKARAHNQAMMELGALVCR-KKPCCASCPLGAFC 254
>gi|94991133|ref|YP_599233.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10270]
gi|94544641|gb|ABF34689.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10270]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|21911120|ref|NP_665388.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
MGAS315]
gi|28895195|ref|NP_801545.1| A/G-specific adenine glycosylase [Streptococcus pyogenes SSI-1]
gi|50914915|ref|YP_060887.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10394]
gi|94989192|ref|YP_597293.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS9429]
gi|94995012|ref|YP_603110.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10750]
gi|21905330|gb|AAM80191.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
MGAS315]
gi|28810441|dbj|BAC63378.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
SSI-1]
gi|50903989|gb|AAT87704.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10394]
gi|94542700|gb|ABF32749.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS9429]
gi|94548520|gb|ABF38566.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS10750]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|327334878|gb|EGE76589.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL097PA1]
Length = 291
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 11/209 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + + +L + + ++V+ ++S Q+ V TP
Sbjct: 9 QVIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWMNRWPTPDD 68
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + +G R+ + S + + E D +P + + L LPGIG A+
Sbjct: 69 LAEEDSGEAVAAWGRLGYPRRALR-LHSCAVAIATEHDGVVPNSYDELVALPGIGDYTAS 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPK--HQYNAHY 196
++S AFG +DT++ R+ R P V ++ ++P +
Sbjct: 128 AVVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERVVADALVPDEDARAAKWAV 187
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC AR PQC+ C I + C+ +
Sbjct: 188 ASMELGALVCTARSPQCEVCPIRDSCRWV 216
>gi|222153667|ref|YP_002562844.1| A/G-specific adenine glycosylase [Streptococcus uberis 0140J]
gi|222114480|emb|CAR43339.1| putative A/G-specific adenine glycosylase [Streptococcus uberis
0140J]
Length = 375
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +E+ + K +L + N + + V+ ++ Q+ V + E
Sbjct: 1 MWDQTTIEDFRRTLLNWYDHEKRDLPWRRTKNPYHIWVSEIMLQQTQVQTVIPYYQRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T ++ E++L +G Y + N+ + ++ +FD K P T EG++ L G
Sbjct: 61 WFPTVAELADADEERLLKAWEGLGYYS-RVRNMQKAAQQIMTDFDGKFPSTYEGISELKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF + VD ++ R+ + K + + +I P+
Sbjct: 120 IGPYTAGAISSIAFNLAQPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPER 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ + I
Sbjct: 180 PGDFNQALMDLGTDIESAKNPRPEESPIR 208
>gi|212691239|ref|ZP_03299367.1| hypothetical protein BACDOR_00730 [Bacteroides dorei DSM 17855]
gi|212666471|gb|EEB27043.1| hypothetical protein BACDOR_00730 [Bacteroides dorei DSM 17855]
Length = 352
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 13/207 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + N + + ++ ++ Q+ +
Sbjct: 1 MENFSRKLIDWYRENGRDLPWRRTKNPYLIWISEIILQQTRVAQGYDYYQRFVTRFPDVF 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P T G+ L G+G A
Sbjct: 61 ALAAADEDEVMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYAGVRALKGVGEYTA 117
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE------QSLLRIIPPKHQYNAH 195
I S A+ +P VD +++R+ +R L + E + ++ + +
Sbjct: 118 AAICSFAYDMPYAVVDGNVYRVLSRW-LGIDTPIDSTEGKKLFVRIADELLDCECPGLYN 176
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P C C +S+ C
Sbjct: 177 QAIMDFGALQCTPVAPDCLFCPLSDSC 203
>gi|319410657|emb|CBY91030.1| A/G-specific adenine glycosylase [Neisseria meningitidis WUE 2594]
Length = 346
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|163749423|ref|ZP_02156671.1| A/G-specific adenine glycosylase [Shewanella benthica KT99]
gi|161330832|gb|EDQ01759.1| A/G-specific adenine glycosylase [Shewanella benthica KT99]
Length = 361
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 31 LFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + V+ ++ Q+ V E T +
Sbjct: 17 RIISWYEKCGRKHLPWQQDKTPYKVWVSEIMLQQTQVSTVIPYYLKFMEHFPTIDSLADA 76
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ +Y +G Y ++ N+ + ++ +E ++ P+ E + LPGIGR A +LS
Sbjct: 77 PQDEVLHYWTGLGYYA-RARNLHKSAQLIRDEHGSQFPRDFEDVLSLPGIGRSTAGAVLS 135
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLH 201
+A +D ++ R+ R G G +VE L ++ P + ++
Sbjct: 136 LALAQHHAILDGNVKRVLARHGAIDGWPGKKQVENKLWDLTEKLTPDLDVQKYNQAMMDI 195
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C +P C C ++ C+
Sbjct: 196 GASICSRSRPVCSDCPVAIDCQA 218
>gi|299141563|ref|ZP_07034699.1| A/G-specific adenine glycosylase [Prevotella oris C735]
gi|298576899|gb|EFI48769.1| A/G-specific adenine glycosylase [Prevotella oris C735]
Length = 336
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 77/214 (35%), Gaps = 11/214 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + + L + N + + ++ ++ Q+ V E
Sbjct: 2 KQNISLFTSTLLAWYRTNGRNLPWRNTQDPYAIWLSEIILQQTRIVQGMDYWLRFMEKWP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + A E ++ + +G Y + + I+ P TL+G+ RL G+G
Sbjct: 62 CVEDLAAAKEDEVMRMWQGLGYYSRARNLHKAAQQIVALGHF---PNTLDGIKRLKGVGD 118
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYN 193
A I S AFG+ VD + +R+ R + + +P +
Sbjct: 119 YTAAAIGSFAFGLQVASVDGNFYRVLARYFGIDTPINTTEGIKLFAALAQEHLPQGAAAD 178
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G C + PQC+ C ++ C ++
Sbjct: 179 YNQAVMDFGATQCTPKSPQCEVCPLAETCVARRE 212
>gi|71904206|ref|YP_281009.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS6180]
gi|71803301|gb|AAX72654.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS6180]
Length = 384
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 11 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 71 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 130 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 190 PGDFNQALMDLGTDIESAKTPRPDESPIR 218
>gi|3860539|emb|CAA04675.1| adenine glycosylase [Neisseria meningitidis]
gi|316984219|gb|EFV63197.1| A/G-specific adenine glycosylase [Neisseria meningitidis H44/76]
gi|325140386|gb|EGC62907.1| A/G-specific adenine glycosylase [Neisseria meningitidis CU385]
Length = 346
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|19746766|ref|NP_607902.1| A/G-specific adenine glycosylase [Streptococcus pyogenes MGAS8232]
gi|19748998|gb|AAL98401.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
MGAS8232]
Length = 374
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|325925083|ref|ZP_08186503.1| A/G-specific DNA-adenine glycosylase [Xanthomonas perforans 91-118]
gi|325544499|gb|EGD15862.1| A/G-specific DNA-adenine glycosylase [Xanthomonas perforans 91-118]
Length = 357
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDGHGRHDLPWQHPRTPYRVWLSEIMLQQTQVAVVIPYFHKFMARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAQWAGLGYYA-RARNLHAAAKQCVALHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI-------IPPKHQY 192
A ILS A+ +D ++ R+ R +A +E+ L ++ +P
Sbjct: 129 AGAILSQAWNDRFAIMDGNVKRVLARFHGIAGYPGLPAIEKQLWQLATSHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQTDCIARR 222
>gi|78048308|ref|YP_364483.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036738|emb|CAJ24431.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 357
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDGHGRHDLPWQHPRTPYRVWLSEIMLQQTQVAVVIPYFHKFMARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAQWAGLGYYA-RARNLHAAAKQCVALHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI-------IPPKHQY 192
A ILS A+ +D ++ R+ R +A +E+ L ++ +P
Sbjct: 129 AGAILSQAWNDRFAIMDGNVKRVLARFHGIAGYPGLPAIEKQLWQLATSHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + C +
Sbjct: 189 DYTQAQMDFGATLCTRGKPACVLCPLQADCIARR 222
>gi|330446889|ref|ZP_08310540.1| A/G-specific adenine glycosylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491080|dbj|GAA05037.1| A/G-specific adenine glycosylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 354
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + ++ ++ Q+ V + E T Q + A
Sbjct: 7 DAILAWYDKFGRKTLPWQQNKTPYKVWLSEIMLQQTQVATVIPYFERFMERFPTVQDLAA 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +G Y ++ N+ + +++++ + P ++ + LPGIGR A +L
Sbjct: 67 AEQDEVLHLWTGLGYYA-RARNLHKAAKMIVSDHNGVFPTDIDQVQALPGIGRSTAGAVL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYN----AHYWLVL 200
S++ G +D ++ R +R G K VE +L I + + ++
Sbjct: 126 SLSLGQHHPILDGNVKRTLSRCYAVEGWPGKKPVENTLWEIAETNTPADGVERYNQAMMD 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C KP+C+ C +SN C + Q
Sbjct: 186 MGAMICTRSKPKCELCPVSNQCLALAQ 212
>gi|265752040|ref|ZP_06087833.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_33FAA]
gi|263236832|gb|EEZ22302.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_1_33FAA]
Length = 352
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + +L + N + + ++ ++ Q+ +
Sbjct: 1 MENFSRKLIDWYRENGRDLPWRRTKNPYLIWISEIILQQTRVAQGYDYYQRFVTRFPDVF 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P T G+ L G+G A
Sbjct: 61 ALAAADEDEVMKYWQGLGYYSRARNLHAAARRMAEAGGF---PVTYAGVRALKGVGEYTA 117
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE------QSLLRIIPPKHQYNAH 195
I S A+ +P VD +++R+ +R L + E Q ++ + +
Sbjct: 118 AAICSFAYDMPYAVVDGNVYRVLSRW-LGIDTPIDSTEGKKLFVQIADELLDCECPGLYN 176
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G C P C C +S+ C
Sbjct: 177 QAIMDFGALQCTPVAPDCLFCPLSDSC 203
>gi|293402394|ref|ZP_06646531.1| A/G-specific adenine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304241|gb|EFE45493.1| A/G-specific adenine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 360
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 81/217 (37%), Gaps = 10/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + + + + L + + + V+ ++ Q+ V +
Sbjct: 9 MKEKHDKQHLVQALLEWYDANARILPWRSEPTPYRVWVSEIMLQQTRVEAVKPYFERFVN 68
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + +L +G Y + +N+ + + + +P + E L +LPG
Sbjct: 69 ALPDVHALANADDDELHKLWEGLGYYN-RVKNMKKCAQYCVKHYAGSLPNSYELLKQLPG 127
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ +R + +T K + + IP +
Sbjct: 128 IGDYTAGAIASIAFHLPYPAVDGNVLRVFSRLLVSEDDILKERTKKKFQNIIKEYIPIER 187
Query: 191 QYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
L+ G +C P+C C ++ C +
Sbjct: 188 CDAFTQALMEIGALICVPNAMPRCNICPLAEDCIGYQ 224
>gi|86146423|ref|ZP_01064747.1| A/G-specific adenine glycosylase [Vibrio sp. MED222]
gi|85835902|gb|EAQ54036.1| A/G-specific adenine glycosylase [Vibrio sp. MED222]
Length = 352
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + EL + +T+ ++ ++ Q+ V + E T + +
Sbjct: 10 KWYDAFGRKELPWQQNKTAYTVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ ++ + P ++E + LPGIGR A +LS
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKIVTEQYGGEFPLSIEEMNALPGIGRSTAAAVLSSVH 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
+P +D ++ R R G KVE L P + + ++ G
Sbjct: 129 KLPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWEHAEAHTPNQDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC KP+C C I ++C+ K
Sbjct: 189 VCTRSKPKCTLCPIESMCEAKK 210
>gi|325128417|gb|EGC51298.1| A/G-specific adenine glycosylase [Neisseria meningitidis N1568]
gi|325132412|gb|EGC55105.1| A/G-specific adenine glycosylase [Neisseria meningitidis M6190]
Length = 346
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYN 193
A I + +F +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 STAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|325134370|gb|EGC57015.1| A/G-specific adenine glycosylase [Neisseria meningitidis M13399]
gi|325138402|gb|EGC60970.1| A/G-specific adenine glycosylase [Neisseria meningitidis ES14902]
Length = 346
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|139473169|ref|YP_001127884.1| A/G-specific adenine glycosylase [Streptococcus pyogenes str.
Manfredo]
gi|134271415|emb|CAM29635.1| putative A/G-specific adenine glycosylase [Streptococcus pyogenes
str. Manfredo]
Length = 374
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + + K +L + N + + V+ ++ Q+ V K E
Sbjct: 1 MWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E++L +G Y + N+ + ++ +F P T + + L G
Sbjct: 61 WFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 120 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 180 PGDFNQALMDLGTDIESAKTPRPDESPIR 208
>gi|88801871|ref|ZP_01117399.1| putative A/G-specific adenine glycosylase [Polaribacter irgensii
23-P]
gi|88782529|gb|EAR13706.1| putative A/G-specific adenine glycosylase [Polaribacter irgensii
23-P]
Length = 347
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 9/209 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + EL + N + + ++ ++ Q+ T +
Sbjct: 2 KFSNTLVYWYLQNNRELPWRKSKNPYFIWLSEIMLQQTRVAQGLGYYLKFTSTFPTVFDL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E + + +G Y ++ N+ + + E + + P + + +L GIG A+
Sbjct: 62 AKAEESTVLKMWQGLGYYS-RARNLHFSAKHIAQELNGEFPTSYAEIIKLKGIGDYTASA 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWL 198
I S+ F PT VD +++R+ +R T + + +I P + L
Sbjct: 121 IASICFNEPTAVVDGNVYRVLSRYFGIKTATNSASGIKEFKTLAQTLIDPSQPGTYNQAL 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G CK + P C SC S+ C +++
Sbjct: 181 MDFGALHCKPQNPLCVSCPFSDSCVALEK 209
>gi|84394056|ref|ZP_00992792.1| A/G-specific adenine glycosylase [Vibrio splendidus 12B01]
gi|84375298|gb|EAP92209.1| A/G-specific adenine glycosylase [Vibrio splendidus 12B01]
Length = 353
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + EL + +T+ ++ ++ Q+ V + E T + +
Sbjct: 10 KWYDAFGRKELPWQQNKTAYTVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ ++ + P ++E + LPGIGR A +LS
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKIVAEQYGGEFPLSIEEMNALPGIGRSTAAAVLSSVH 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
+P +D ++ R R G KVE L P + + ++ G
Sbjct: 129 KLPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWEHAEAHTPNQDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC KP+C C I ++C+ K
Sbjct: 189 VCTRSKPKCTLCPIESMCEAKK 210
>gi|329767019|ref|ZP_08258547.1| endonuclease III [Gemella haemolysans M341]
gi|328837744|gb|EGF87369.1| endonuclease III [Gemella haemolysans M341]
Length = 214
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ +++ +P+ + EL + NH LI+AVLLSAQ D VN+AT LFE T
Sbjct: 9 KKIKAKKVMDYLDKVFPNVECELDFSNHLELIIAVLLSAQCKDEYVNRATVGLFENYKTI 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ YIRT+G+Y+ KS+NI+ ++++L + +D KIPQT E L LPG+GRK
Sbjct: 69 DDYADAKVEDIEKYIRTLGLYKAKSKNIVGMANMLRDVYDYKIPQTREELETLPGVGRKT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
ANV+LS+ F IP I VDTH+ R++ GLA +P +VE++L+ + P + H+ L+
Sbjct: 129 ANVVLSVGFNIPAIAVDTHVERVAKMFGLADINDSPLQVEKNLMSVFPMESWGKIHHQLI 188
Query: 200 LHGRY 204
GRY
Sbjct: 189 HLGRY 193
>gi|262200959|ref|YP_003272167.1| HhH-GPD family protein [Gordonia bronchialis DSM 43247]
gi|262084306|gb|ACY20274.1| HhH-GPD family protein [Gordonia bronchialis DSM 43247]
Length = 300
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 16/211 (7%)
Query: 30 YLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + ++++ ++ Q+ V + P M
Sbjct: 8 RAILGWFDVHERDLPWRDPACSAWHILISEIMLQQTPVSRVIDPWREWVRRWPVPSAMAD 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + +L E D+++P +E + LPGIG A +
Sbjct: 68 TPAGEVLRAWGKLGYPRRALR-LHECAKVLAREHDDRVPADVETMLSLPGIGDYTARAVA 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPPKHQY-------NAH 195
A+G VDT++ R+ R + N ++P
Sbjct: 127 CFAYGQAVPVVDTNVRRVIARAVHGREQPGNPGRADLADAQALLPRASSGGYAPTAPRYS 186
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G VC AR P+C C + + C ++
Sbjct: 187 AALMELGALVCTARNPRCGDCPVPD-CTWVR 216
>gi|125536112|gb|EAY82600.1| hypothetical protein OsI_37821 [Oryza sativa Indica Group]
Length = 468
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 25/223 (11%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNH-----------------FTLIVAVLLSAQSTDVNVN 67
+ + + + +L + + + V+ ++ Q+ V
Sbjct: 48 AAAVRAELLRWYDANRRDLPWRRAAEPPAGSGSGRGEEQRAYAVWVSEVMLQQTRVPVVV 107
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
T + A ++++ +G YR+ + I+ + T
Sbjct: 108 DYYSRWMARWPTVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPRTAST- 166
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSL 182
L + GIG A I S+AF VD ++ R+ +R P + Q
Sbjct: 167 --LREVRGIGDYTAGAIASIAFNEVVPVVDGNVVRVISRFYAIPDNPKESSTVKRFWQLT 224
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ P + + ++ G +C KP C C +S+ C+ +
Sbjct: 225 GELVDPSRPGDFNQAMMELGATLCSKTKPGCSQCPVSSHCQAL 267
>gi|328474070|gb|EGF44875.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus 10329]
Length = 358
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+++ ++ ++ Q+ V + E T + + ++ + +G Y ++
Sbjct: 26 KTAYSVWLSEIMLQQTQVTTVIPYYQCFLERFPTVVDLANAEQDEVLHLWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P LE + LPGIGR A +LS P +D ++ R +
Sbjct: 85 RNLHKAAKEVAHKYCGEFPLNLEQMNALPGIGRSTAAAVLSSVHKQPHAILDGNVKRTLS 144
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE L I P + ++ G VC KP+C C +++
Sbjct: 145 RCFAVEGWPGQKKVENQLWEIAEAHTPQTDVDKYNQAMMDMGAMVCTRSKPKCTLCPVAD 204
Query: 221 LCKRIKQ 227
LC KQ
Sbjct: 205 LCVAKKQ 211
>gi|331664548|ref|ZP_08365454.1| A/G-specific adenine glycosylase [Escherichia coli TA143]
gi|331058479|gb|EGI30460.1| A/G-specific adenine glycosylase [Escherichia coli TA143]
Length = 350
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVDRFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|262273750|ref|ZP_06051563.1| A/G-specific adenine glycosylase [Grimontia hollisae CIP 101886]
gi|262222165|gb|EEY73477.1| A/G-specific adenine glycosylase [Grimontia hollisae CIP 101886]
Length = 356
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 27 KTPYKVWLSEIMLQQTQVATVIPYFERFMTRFPTVVDLAHAELDEVLHLWTGLGYYA-RA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P T+E + LPG+GR A +LS++ G +D ++ R +
Sbjct: 86 RNLHKAAQKIAADYNGEFPTTIEDVMALPGVGRSTAGAVLSLSLGQHHPILDGNVKRTLS 145
Query: 166 RIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L + P + + ++ G +C KP+C C +++
Sbjct: 146 RHFAVEGWPGKKPVENRLWELAEENTPAEGVQRYNQAMMDMGAMICTRSKPKCYLCPVNH 205
Query: 221 LCKR 224
C+
Sbjct: 206 SCEA 209
>gi|225012357|ref|ZP_03702793.1| A/G-specific adenine glycosylase [Flavobacteria bacterium MS024-2A]
gi|225003334|gb|EEG41308.1| A/G-specific adenine glycosylase [Flavobacteria bacterium MS024-2A]
Length = 344
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 9/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + + + + ++ ++ Q+ + T + +
Sbjct: 3 KKLISWYLENQRSFAWRKTKDPYHIWLSEIILQQTRTAQGLPYYEKFISAFPTIKDLALA 62
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + + +G Y ++ N+ + + + E++ P T L +L G+G A+ I S
Sbjct: 63 KEDDVLKLWQGLGYYS-RARNLYATAQFIHFEYNGIFPSTFNELLKLKGVGDYTASAIAS 121
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++F IP VD +++R +R + + + +I + + L+
Sbjct: 122 ISFNIPEAVVDGNVYRFLSRYFGIETPINSSAAQKEFKAKAMELIDVSQPGDFNQALMEF 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C R P C C + C Q
Sbjct: 182 GSTQCIPRSPNCVVCPFAAECVAYNQ 207
>gi|148698636|gb|EDL30583.1| mutY homolog (E. coli), isoform CRA_c [Mus musculus]
Length = 451
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 30/221 (13%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+++ +G Y + ++ +
Sbjct: 122 RW--------------MQEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 167
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 168 LLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLV 227
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 228 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 268
>gi|330995079|ref|ZP_08318996.1| A/G-specific adenine glycosylase [Paraprevotella xylaniphila YIT
11841]
gi|329576655|gb|EGG58158.1| A/G-specific adenine glycosylase [Paraprevotella xylaniphila YIT
11841]
Length = 352
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 11/204 (5%)
Query: 31 LFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + L + + + + ++ ++ Q+ V + A
Sbjct: 9 KLLAWYQENRRVLPWRDTHDPYMIWISEIILQQTRVVQGYDYFLRFMARFPDVDALAAAS 68
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E ++ + +G Y + + I+ P+ E + +L G+G A I S
Sbjct: 69 EDEVLKCWQGLGYYSRARNLHAAARQIVE---WGGFPERYENIRQLKGVGDYTAAAIASF 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLVLHG 202
AFG+P VD +++R+ +R + ++P + + ++ G
Sbjct: 126 AFGLPHAVVDGNVYRVLSRYYGIEEPIDTGHGKKCFAALAQELLPEGKAADYNQAVMDFG 185
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
C + P+C C + C +
Sbjct: 186 ALQCVPKNPKCGECPLVGGCIAFR 209
>gi|154496250|ref|ZP_02034946.1| hypothetical protein BACCAP_00535 [Bacteroides capillosus ATCC
29799]
gi|150274333|gb|EDN01410.1| hypothetical protein BACCAP_00535 [Bacteroides capillosus ATCC
29799]
Length = 355
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + V+ ++ Q+ V E + A+ +
Sbjct: 8 LLAWYHENARVLPWRSDPTPYHVWVSEIMLQQTRVAAVMGYYSRFMEALPDVAALAAVED 67
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
L + +G Y ++ N+ + ++ + IP + E L L G+G A I S+A
Sbjct: 68 DTLMKLWQGLGYYS-RARNLKKAAGQVMERYGGAIPASYEELLTLAGVGEYTAGAISSIA 126
Query: 149 FGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FGIP VD ++ R+ RI + T ++ Q+L IIP + ++ G
Sbjct: 127 FGIPVPAVDGNVLRVVARIAGDEGDITLPATKKRMGQALQEIIPTAMPGAFNQAMMELGA 186
Query: 204 YVCKAR-KPQCQSCIISNLCKRI 225
VC P C C + C +
Sbjct: 187 TVCLPNGAPLCDRCPAAGFCAAL 209
>gi|330685546|gb|EGG97192.1| A/G-specific adenine glycosylase [Staphylococcus epidermidis
VCU121]
Length = 347
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 76/201 (37%), Gaps = 8/201 (3%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + + + N + + ++ ++ Q+ V + T + E +
Sbjct: 13 QWFNQNQRSMPWRETTNPYYIWLSEVMLQQTQVKTVIDYYDRFIQRFPTIADLSEAHEDE 72
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ Y +G Y ++ N + +++ +P E L G+G ++S+AF
Sbjct: 73 VLKYWEGLGYYS-RARNFHHAIKEVQHDYQGIVPSDPEHFKSLKGVGPYTQAAVMSIAFD 131
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSL-LRIIP--PKHQYNAHYWLVLHGRYVC 206
P VD ++FR+ +R+ + ++ ++P + + ++ G +C
Sbjct: 132 HPLPTVDGNVFRVWSRLNNDSRDIKLQSTRKAYEQELLPYVQEEAGTFNQSMMELGALIC 191
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+ P C C + C+ +
Sbjct: 192 TPKNPLCMFCPVQENCEAYDK 212
>gi|260664429|ref|ZP_05865281.1| endonuclease III [Lactobacillus jensenii SJ-7A-US]
gi|313472175|ref|ZP_07812667.1| endonuclease III [Lactobacillus jensenii 1153]
gi|239529546|gb|EEQ68547.1| endonuclease III [Lactobacillus jensenii 1153]
gi|260561494|gb|EEX27466.1| endonuclease III [Lactobacillus jensenii SJ-7A-US]
Length = 210
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 1/192 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L +E ++ +P KGEL + F L+ AV +SAQ+TD VN+ T LF
Sbjct: 8 LLNDEEALKVLNQILAMYPDAKGELNWDTVFHLVCAVAISAQTTDKMVNRVTPKLFSDYP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP M K L+ I IG++R K++++ ++ +L+ F ++P+ + L LPG+G
Sbjct: 68 TPAAMAKADIKDLEADISKIGLFRSKAKHLKEMAQMLVENFGGEVPKDKKLLMTLPGVGE 127
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+L+ A+G+P I VDTH+ RIS + + P P+++E+ L I+P + H+
Sbjct: 128 KTANVVLAEAYGVPAIAVDTHVARISKKFKIVPENAKPHEIEKRLEEILPKEQWIKTHHA 187
Query: 198 LVLHGRYVCKAR 209
++ GRY AR
Sbjct: 188 MIFFGRYTMPAR 199
>gi|20093633|ref|NP_613480.1| EndoIII-related endonuclease [Methanopyrus kandleri AV19]
gi|19886502|gb|AAM01410.1| Predicted EndoIII-related endonuclease [Methanopyrus kandleri AV19]
Length = 233
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++ ++S ++ D ++ + TP+ + + K L +R G+YR+K+
Sbjct: 43 RDPFRALIQAIISQRTRDDVTDRVAERFLRKFKTPKDVAEVNLKDLVETLRDAGLYRQKA 102
Query: 106 ENIISLSHIL-------INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
+ I + + L RLPG+G K A+V+L A G VDT
Sbjct: 103 KMIKECCERILADGLDLEEIVQKPTEEARRELMRLPGVGPKTADVVLLFAGGHDVCPVDT 162
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
H+ R+S R+GL K +V++++ ++P + AH L+ GR +C+ RKPQC+ C +
Sbjct: 163 HVARVSRRLGLTDSKEYFEVQEAVHEMVPEGERGKAHLALIQFGREICRPRKPQCELCFV 222
Query: 219 SNLCKRIKQ 227
C +
Sbjct: 223 RRFCPYGGE 231
>gi|295424852|ref|ZP_06817567.1| endonuclease III [Lactobacillus amylolyticus DSM 11664]
gi|295065418|gb|EFG56311.1| endonuclease III [Lactobacillus amylolyticus DSM 11664]
Length = 210
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 3/198 (1%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P K EL + + F L+ AVL+SAQ+TD VN+ E
Sbjct: 4 KLLSDQEALAVLKRIDSLYPGAKSELQWDSKFHLLCAVLMSAQTTDKMVNRVMPQFSEDF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
TPQ + K+++ I+ IG+Y K++++ + + IL++++D++IP + L +LPG+G
Sbjct: 64 PTPQALAKAPIAKIEHDIKKIGLYHSKAKHLKATAQILVDKYDSQIPADKKKLMQLPGVG 123
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ FG+P I VDTH+ RIS + + P K TP++VE+ L ++P + + H+
Sbjct: 124 EKTANVVLAEGFGVPAIAVDTHVSRISKKFHIVPAKATPHEVEKRLEELLPKEEWIHTHH 183
Query: 197 WLVLHGRYVC--KARKPQ 212
++ GRY +A+ P
Sbjct: 184 AMIRFGRYTMPARAKNPD 201
>gi|294084665|ref|YP_003551423.1| A/G-specific adenine glycosylase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664238|gb|ADE39339.1| A/G-specific adenine glycosylase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 372
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%)
Query: 32 FSLKWPSPKGELYYVN-------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +L + + + + ++ ++ Q+ V +
Sbjct: 29 LFAWYDRHGRDLPWRHRWPALAPAYHVWLSEIMLQQTVVATVIPYFLDFTRRWPDVTALA 88
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + +G Y ++ N+ ++ + E P + GL LPGIG A I
Sbjct: 89 SAPLDDVLAAWAGLGYYA-RARNLHKAANKVAFELGGIFPADVGGLRDLPGIGPYTAGAI 147
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLH 201
++AFG + VD +I R+ R P ++ I P + + L+
Sbjct: 148 SAIAFGQHSTVVDGNIERVLARQYAVTTPLPAAKVEISAIYAAIRPDQRPSDFPQALMDF 207
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
VC + P C SC ++ C +Q
Sbjct: 208 ANAVCTVKAPGCSSCPLATSCIAGRQ 233
>gi|146318706|ref|YP_001198418.1| A/G-specific DNA glycosylase [Streptococcus suis 05ZYH33]
gi|146320915|ref|YP_001200626.1| A/G-specific DNA glycosylase [Streptococcus suis 98HAH33]
gi|145689512|gb|ABP90018.1| A/G-specific DNA glycosylase [Streptococcus suis 05ZYH33]
gi|145691721|gb|ABP92226.1| A/G-specific DNA glycosylase [Streptococcus suis 98HAH33]
gi|292558386|gb|ADE31387.1| A/G-specific adenine glycosylase MutY [Streptococcus suis GZ1]
gi|319758168|gb|ADV70110.1| A/G-specific DNA glycosylase [Streptococcus suis JS14]
Length = 410
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 85/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++++ + + K +L + + + + V+ ++ Q+ V +
Sbjct: 35 MWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPYAIWVSEIMLQQTRVDTVIPYYERFLH 94
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E+ + +G Y + N+ + ++ +FD + P T ++ L G
Sbjct: 95 HLPTISDLAQAPEEVILKLWEGLGYYS-RVRNMQKAAQQMVEDFDGQFPTTHAAISSLKG 153
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT----PNKVEQSLLRI-IPPKH 190
IG A I S+AF +P VD ++ R+ +R+ K+ Q+++ + I +
Sbjct: 154 IGPYTAGAISSIAFNLPEPAVDGNVMRVLSRLFEVDYDIGLPANRKIFQAMMELLIDSER 213
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ Q +
Sbjct: 214 PGDFNQALMDLGSDIESPVNPRPQDSPVKAF 244
>gi|271499453|ref|YP_003332478.1| A/G-specific adenine glycosylase [Dickeya dadantii Ech586]
gi|270343008|gb|ACZ75773.1| A/G-specific adenine glycosylase [Dickeya dadantii Ech586]
Length = 377
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 76/198 (38%), Gaps = 7/198 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + ++ ++ Q+ V + T +++ A +
Sbjct: 32 ERYGRKTLPWQLEKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVRELAAAPLDDVL 91
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + ++ P + + LPG+GR A ILS++ G
Sbjct: 92 HLWTGLGYYA-RARNLHKAAQTIVERHGGDFPTRFDDIVDLPGVGRSTAGAILSLSLGQH 150
Query: 153 TIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ R G +VE+ L + P + ++ G VC
Sbjct: 151 YPILDGNVKRVLARCYAVTGWPGKKEVEKQLWTLSETVTPALGVEKFNQAMMDLGAMVCT 210
Query: 208 ARKPQCQSCIISNLCKRI 225
+P+C+ C +SN C
Sbjct: 211 RSRPKCELCPLSNGCVAY 228
>gi|33152975|ref|NP_874328.1| A/G-specific adenine glycosylase [Haemophilus ducreyi 35000HP]
gi|33149200|gb|AAP96717.1| A/G-specific adenine glycosylase [Haemophilus ducreyi 35000HP]
Length = 362
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 84/205 (40%), Gaps = 8/205 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F ++ +++ ++ ++ Q+ V + + +
Sbjct: 4 AQAVLAWF-KQYGRHHLPWQQNKTLYSVWLSEVMLQQTQVATVIPYFERFMVRFPSVIDL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
++ + +G Y ++ N+ + + ++F + P+ + + L GIGR A
Sbjct: 63 ANAEIDEVLHLWTGLGYYA-RARNLHKAAQQIRDQFAGQFPREFDQVLSLAGIGRSTAGA 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWL 198
ILS +P +D ++ R+ +R+ L G + K VE L ++ P + + + +
Sbjct: 122 ILSSVLDVPYPILDGNVKRVLSRVFLVEGWSGEKAVENKLWLLTAQVTPNRQVADFNQAM 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G VC KP+C C + C+
Sbjct: 182 MDLGALVCSRSKPKCAICPLETQCE 206
>gi|77456548|ref|YP_346053.1| A/G-specific DNA-adenine glycosylase [Pseudomonas fluorescens
Pf0-1]
gi|77380551|gb|ABA72064.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens Pf0-1]
Length = 355
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 10/210 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E+ + + +L + N + + V+ ++ Q+ V T
Sbjct: 2 RAEQFSTAVLEWFDRHGRHDLPWQQNINPYRVWVSEIMLQQTQVSTVLNYFDRFMAALPT 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A E ++ + +G Y ++ N+ + I+++++ + P+ +E LT LPGIG
Sbjct: 62 VEALAAAPEDEVLHLWTGLGYYT-RARNLQKTAKIVVSQYGGEFPRDVEKLTELPGIGLS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A I S++ G+ +D ++ R+ R G ++ + R P
Sbjct: 121 TAGAIGSISMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWANAERFTPQDRVNAY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C KP C C + C+
Sbjct: 181 TQAMMDLGATLCTRSKPSCLLCPLEKGCEA 210
>gi|148651984|ref|YP_001279077.1| A/G-specific adenine glycosylase [Psychrobacter sp. PRwf-1]
gi|148571068|gb|ABQ93127.1| A/G-specific DNA-adenine glycosylase [Psychrobacter sp. PRwf-1]
Length = 424
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 6/197 (3%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + + N + + ++ ++ Q+ V + T Q + + +
Sbjct: 56 PWQQHKTDTPNPYIVWLSEVMLQQTQVTTVIPYFQRFITSFPTVQDLANAQWDTVAEHWA 115
Query: 97 TIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+G Y + ++ + PQT+E + G+G+ A I++M +
Sbjct: 116 GLGYYARARNLHKGAKQLVEIIKTTGRFPQTVEDWEAISGVGQSTAGAIVAMGLHGYGVI 175
Query: 156 VDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
D ++ R+ R + T + R+ P + + ++ G +C R
Sbjct: 176 CDGNVKRVITRWAGIDGDITKSATNKALWALAERLTPTEDSGHFAQAMMDMGATLCTRRH 235
Query: 211 PQCQSCIISNLCKRIKQ 227
P C+ C I++ C +
Sbjct: 236 PSCEVCPINSDCIAYAE 252
>gi|88705278|ref|ZP_01102989.1| A/G-specific adenine glycosylase [Congregibacter litoralis KT71]
gi|88700368|gb|EAQ97476.1| A/G-specific adenine glycosylase [Congregibacter litoralis KT71]
Length = 358
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 10/204 (4%)
Query: 31 LFSLKWP-SPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + ++ ++ Q+ V + Q + A
Sbjct: 7 RLLAWYDLHGRHDLPWQRDATPYHVWLSEIMLQQTQVATVIPYYERFTSRFPDIQTLAAA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ +G Y ++ N+ + +L+ +F P +E L LPGIGR A ILS
Sbjct: 67 EADDVLHHWSGLGYYA-RARNLHKAAKMLVADFSGTFPADVEALQSLPGIGRSTAGAILS 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLH 201
A G +D ++ R+ R G ++ + P + ++
Sbjct: 126 TALGGRAAILDGNVKRVLARFHAVEGWPGKNAVASRLWELAESHTPDCRVADYTQGIMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G +C KP C C +++ C +
Sbjct: 186 GATLCTRSKPDCPRCPMADDCAAL 209
>gi|325142600|gb|EGC64994.1| A/G-specific adenine glycosylase [Neisseria meningitidis 961-5945]
gi|325198538|gb|ADY93994.1| A/G-specific adenine glycosylase [Neisseria meningitidis G2136]
gi|325205839|gb|ADZ01292.1| A/G-specific adenine glycosylase [Neisseria meningitidis
M04-240196]
Length = 346
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|308389513|gb|ADO31833.1| adenine glycosylase [Neisseria meningitidis alpha710]
gi|325130483|gb|EGC53242.1| A/G-specific adenine glycosylase [Neisseria meningitidis
OX99.30304]
gi|325136486|gb|EGC59091.1| A/G-specific adenine glycosylase [Neisseria meningitidis M0579]
gi|325136552|gb|EGC59156.1| A/G-specific adenine glycosylase [Neisseria meningitidis M0579]
gi|325201896|gb|ADY97350.1| A/G-specific adenine glycosylase [Neisseria meningitidis
M01-240149]
gi|325208352|gb|ADZ03804.1| A/G-specific adenine glycosylase [Neisseria meningitidis NZ-05/33]
Length = 346
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|301169476|emb|CBW29077.1| adenine DNA glycosylase [Haemophilus influenzae 10810]
Length = 378
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNIIALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|322385563|ref|ZP_08059207.1| A/G-specific adenine glycosylase [Streptococcus cristatus ATCC
51100]
gi|321270301|gb|EFX53217.1| A/G-specific adenine glycosylase [Streptococcus cristatus ATCC
51100]
Length = 390
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 14 MWEEEKIASFRKKLLTWYDEHKRDLPWRRSNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 73
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E++L +G Y + N+ + ++ F K P + E + L G
Sbjct: 74 WFPTVADLARAPEERLLKAWEGLGYYS-RVRNMQKAAQQIMANFAGKFPGSYEEIASLKG 132
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+P VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 133 IGPYTAGAIASIAFGLPEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 192
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 193 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 223
>gi|323966478|gb|EGB61911.1| A/G-specific adenine glycosylase [Escherichia coli M863]
Length = 355
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|110806873|ref|YP_690393.1| adenine DNA glycosylase [Shigella flexneri 5 str. 8401]
gi|110616421|gb|ABF05088.1| A/G-specific adenine glycosylase [Shigella flexneri 5 str. 8401]
gi|281602301|gb|ADA75285.1| Adenine glycosylase [Shigella flexneri 2002017]
Length = 360
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|187731126|ref|YP_001881735.1| adenine DNA glycosylase [Shigella boydii CDC 3083-94]
gi|187428118|gb|ACD07392.1| A/G-specific adenine glycosylase [Shigella boydii CDC 3083-94]
Length = 360
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNMHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|305666099|ref|YP_003862386.1| A/G-specific adenine glycosylase [Maribacter sp. HTCC2170]
gi|88707533|gb|EAQ99776.1| A/G-specific adenine glycosylase [Maribacter sp. HTCC2170]
Length = 345
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 35 KWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ K L + + + + ++ ++ Q+ E T ++ E+++
Sbjct: 10 WYAQNKRNLPWRSTKDPYRIWLSEIMLQQTRVSQGLPYYLKFTEHFPTVNELAGASEEQV 69
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y ++ N+ + + ++NE+ K P T L +L G+G A+ I S+ F
Sbjct: 70 LKLWQGLGYYS-RARNLHTTAKTVVNEYHGKFPNTYIELLKLKGVGDYTASAIASICFDE 128
Query: 152 PTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
P VD +++R+ +R + K ++ ++ ++ + + ++ G C
Sbjct: 129 PEPVVDGNVYRVLSRYFGVDIPINGTKGVKYFKELAKEVMNVENIRDYNQGIMEFGAIQC 188
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+ P C C ++ C +K+
Sbjct: 189 APKNPDCSVCPLNEGCVALKK 209
>gi|325273134|ref|ZP_08139431.1| A/G-specific adenine glycosylase [Pseudomonas sp. TJI-51]
gi|324101739|gb|EGB99288.1| A/G-specific adenine glycosylase [Pseudomonas sp. TJI-51]
Length = 354
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 86/214 (40%), Gaps = 13/214 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
TP++ + + +L + + + V+ ++ Q+ V +
Sbjct: 1 MTPEQFS---SAVLDWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQ 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E ++ + +G Y ++ N+ + I++ + + P+++E LT LPG
Sbjct: 58 ALPTVQALAEAPEDEVLHLWTGLGYYT-RARNLQKAAKIVVAQHGGEFPRSVEQLTELPG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IGR A I S++ GI +D ++ R+ R G ++ + R P +
Sbjct: 117 IGRSTAGAIASISMGIRAPILDGNVKRVLARFTAQGGYPGEPKVANQLWATAERFTPQQR 176
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C KP C C + C+
Sbjct: 177 ANHYTQAMMDMGATLCTRSKPSCLICPLQRGCEA 210
>gi|170765545|ref|ZP_02900356.1| A/G-specific adenine glycosylase [Escherichia albertii TW07627]
gi|170124691|gb|EDS93622.1| A/G-specific adenine glycosylase [Escherichia albertii TW07627]
Length = 360
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + + + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDDVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQHVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L R+ P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWRLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|256419983|ref|YP_003120636.1| A/G-specific adenine glycosylase [Chitinophaga pinensis DSM 2588]
gi|256034891|gb|ACU58435.1| A/G-specific adenine glycosylase [Chitinophaga pinensis DSM 2588]
Length = 354
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ + T Q++ A E+ + + +G Y +
Sbjct: 27 KDPYRIWLSEIILQQTRVEQGWAYYEKFILNYPTVQELAAAPEEAVFRLWQGLGYYA-RC 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+++ + + +++ P T E + L G+G + I S AF +P +D ++FR+ +
Sbjct: 86 KNMLAAAKQIASQYHGHFPNTYETIQSLKGVGPYTSAAIASFAFNLPHAVLDGNVFRVLS 145
Query: 166 RIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + ++P + + ++ G VCK ++P C+SC ++
Sbjct: 146 RFFDIDTPIDTTAGKKQFTDLAQELLPHGKSASYNQSIMDFGAVVCKPQQPACKSCPLAA 205
Query: 221 LCKRIKQ 227
CK +Q
Sbjct: 206 KCKGYQQ 212
>gi|296138329|ref|YP_003645572.1| HhH-GPD family protein [Tsukamurella paurometabola DSM 20162]
gi|296026463|gb|ADG77233.1| HhH-GPD family protein [Tsukamurella paurometabola DSM 20162]
Length = 303
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 12/199 (6%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + ++++ ++ Q+ V V + TP + A
Sbjct: 21 WFDRTERDLPWRADGVTPWQILMSEVMLQQTPVVRVEAMWREWVRRWPTPADLAAATGAD 80
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + ++ E +P+T+E L LPGIG A + AFG
Sbjct: 81 AVRAWGKLGYPRRAMR-LHACAQAIVAEHAGVVPETVEELLALPGIGDYTARAVACFAFG 139
Query: 151 IPTIGVDTHIFRISNRI-------GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
VD ++ R+ R + +L +P + + L+ G
Sbjct: 140 QDVPVVDINVRRVLARAVAGDSDAAAPSARRDLAAATEVLETVPAQRRPRLSAALMELGA 199
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 200 LVCTARSPRCGECPVHAGC 218
>gi|331701464|ref|YP_004398423.1| A/G-specific adenine glycosylase [Lactobacillus buchneri NRRL
B-30929]
gi|329128807|gb|AEB73360.1| A/G-specific adenine glycosylase [Lactobacillus buchneri NRRL
B-30929]
Length = 385
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ K ++ + K +L + + + + V+ ++ Q+ V
Sbjct: 4 WSHKTIKAFQETLLAWYDQNKRDLPWRQDQDPYHVWVSEIMLQQTQVETVIPYYLRFMNE 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E KL +G Y ++ N+ + ++ ++ + P T + L L GI
Sbjct: 64 FPTIEDLAAAPEDKLMKAWEGLGYYS-RARNLQKAAQQIVFDYQGQWPTTAKELQELSGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AFG P VD + FR+ R +A T E+ + I+
Sbjct: 123 GPYTAGAIASIAFGQPVAAVDGNAFRVFARLLEIDDDVAKPHTRQVFEKIINPIVSKDRP 182
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A + +
Sbjct: 183 GDFNQAIMDLGASYMTATNYDTSQSPVKDF 212
>gi|30064282|ref|NP_838453.1| adenine DNA glycosylase [Shigella flexneri 2a str. 2457T]
gi|56480224|ref|NP_708732.2| adenine DNA glycosylase [Shigella flexneri 2a str. 301]
gi|30042539|gb|AAP18263.1| adenine glycosylase [Shigella flexneri 2a str. 2457T]
gi|56383775|gb|AAN44439.2| adenine glycosylase [Shigella flexneri 2a str. 301]
gi|320181027|gb|EFW55948.1| A/G-specific adenine glycosylase [Shigella boydii ATCC 9905]
gi|332753010|gb|EGJ83394.1| A/G-specific adenine glycosylase [Shigella flexneri 4343-70]
gi|332753813|gb|EGJ84192.1| A/G-specific adenine glycosylase [Shigella flexneri K-671]
gi|332754666|gb|EGJ85032.1| A/G-specific adenine glycosylase [Shigella flexneri 2747-71]
gi|332765386|gb|EGJ95604.1| A/G-specific adenine glycosylase [Shigella flexneri 2930-71]
gi|332999954|gb|EGK19537.1| A/G-specific adenine glycosylase [Shigella flexneri K-218]
gi|333015103|gb|EGK34446.1| A/G-specific adenine glycosylase [Shigella flexneri K-304]
Length = 350
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1]
gi|229810809|gb|EEP46526.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1]
Length = 378
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWELTEQVTPTVRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|313814516|gb|EFS52230.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL025PA1]
Length = 291
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + ++V+ ++S Q+ V TP +
Sbjct: 10 VIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWMNRWPTPDDL 69
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G R+ + S + + E D +P + + L LPGIG A+
Sbjct: 70 AEEDSGEAVAAWGRLGYPRRALR-LHSCAVTIATEHDGVVPNSYDELVALPGIGDYTASA 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPK--HQYNAHYW 197
++S AFG +DT++ R+ R P V ++ ++P +
Sbjct: 129 VVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERIVADALVPDEDARAAKWAVA 188
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC AR PQC+ C I + C+ +
Sbjct: 189 SMELGALVCTARSPQCEVCPIRDGCRWV 216
>gi|124516274|gb|EAY57782.1| putative A/G-specific DNA glycosylase [Leptospirillum rubarum]
Length = 355
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+P+ E + + + L + + + V+ ++ Q+T V + E
Sbjct: 19 SPRPTERLRDDLLVWYKEVSRSLPWRINRTPYRVWVSEIMLQQTTVRAVLGYFERFLERF 78
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + + +G Y++ + I F P+T+EG LPG+G
Sbjct: 79 PDVDSLAEAPVEDVLKLWEGLGYYQRARNLHRAARIIASGGF----PETVEGWMNLPGVG 134
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQY 192
R A + S+A G T +D ++ R+ R+ A ++P+ E S +
Sbjct: 135 RSTAGAVCSIALGQETPILDVNVRRVLGRLRGISPGDAVRESPDLWELSKAFVTEASDPG 194
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G VC RKP C C S C
Sbjct: 195 EVNQALMEIGAVVCLPRKPLCTVCPWSLDC 224
>gi|91212344|ref|YP_542330.1| adenine DNA glycosylase [Escherichia coli UTI89]
gi|237706385|ref|ZP_04536866.1| adenine DNA glycosylase [Escherichia sp. 3_2_53FAA]
gi|91073918|gb|ABE08799.1| A/G-specific adenine glycosylase [Escherichia coli UTI89]
gi|226899425|gb|EEH85684.1| adenine DNA glycosylase [Escherichia sp. 3_2_53FAA]
Length = 360
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|324115024|gb|EGC08989.1| A/G-specific adenine glycosylase [Escherichia fergusonii B253]
Length = 355
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|254805189|ref|YP_003083410.1| A/G-specific adenine glycosylase [Neisseria meningitidis alpha14]
gi|254668731|emb|CBA06554.1| A/G-specific adenine glycosylase [Neisseria meningitidis alpha14]
Length = 346
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGIFPPERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 STAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++ +C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMAEICEAKKQ 215
>gi|15828031|ref|NP_302294.1| DNA glycosylase [Mycobacterium leprae TN]
gi|221230508|ref|YP_002503924.1| putative DNA glycosylase [Mycobacterium leprae Br4923]
gi|13093584|emb|CAC30875.1| probable DNA glycosylase [Mycobacterium leprae]
gi|219933615|emb|CAR72017.1| probable DNA glycosylase [Mycobacterium leprae Br4923]
Length = 297
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + ++V+ + Q+ V + TP A
Sbjct: 15 LLDWYRQSCRDLPWRQPGVTAWQILVSEFMLQQTPVARVLSIWPDWVQRWPTPSTTAAAS 74
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + I+ E D+ +P ++ L +PGIG A +
Sbjct: 75 AADVLRAWGKLGY-PRRAKRLHESATIIAREHDDVVPDDVDVLLTMPGIGSYTARAVACF 133
Query: 148 AFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIP-PKHQYNAHYWLVLHG 202
A+ P VDT++ R+ R G A P+ + ++P K L+ G
Sbjct: 134 AYHQPVPVVDTNVRRVVARAVHGRADAGPPSATRDHADVSSLLPGKKAAPQFSMALMELG 193
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C ++ C
Sbjct: 194 AIVCTARSPRCGLCPLNE-C 212
>gi|332366864|gb|EGJ44605.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1059]
Length = 387
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWGADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQTPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|327251730|gb|EGE63416.1| A/G-specific adenine glycosylase [Escherichia coli STEC_7v]
Length = 350
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|50841788|ref|YP_055015.1| A/G-specific adenine glycosylase [Propionibacterium acnes
KPA171202]
gi|282853357|ref|ZP_06262694.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
J139]
gi|50839390|gb|AAT82057.1| A/G-specific adenine glycosylase [Propionibacterium acnes
KPA171202]
gi|282582810|gb|EFB88190.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
J139]
gi|314922342|gb|EFS86173.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL001PA1]
gi|314965334|gb|EFT09433.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL082PA2]
gi|314982566|gb|EFT26658.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL110PA3]
gi|315091091|gb|EFT63067.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL110PA4]
gi|315094178|gb|EFT66154.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL060PA1]
gi|315104834|gb|EFT76810.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL050PA2]
gi|315106341|gb|EFT78317.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL030PA1]
gi|327329279|gb|EGE71039.1| putative A/G-specific adenine glycosylase [Propionibacterium acnes
HL103PA1]
Length = 291
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + ++V+ ++S Q+ V TP +
Sbjct: 10 VIEAICAWFDANGRDLPWRRPGTSAWGVLVSEVMSQQTPMSRVIGPWHEWMNRWPTPDDL 69
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G R+ + S + + E D +P + + L LPGIG A+
Sbjct: 70 AEEDSGEAVAAWGRLGYPRRALR-LHSCAVTIATEHDGVVPNSYDELVALPGIGDYTASA 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPK--HQYNAHYW 197
++S AFG +DT++ R+ R P V ++ ++P +
Sbjct: 129 VVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTRAERIVADALVPDEDARAAKWAVA 188
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC AR PQC+ C I + C+ +
Sbjct: 189 SMELGALVCTARSPQCEVCPIRDGCRWV 216
>gi|226942610|ref|YP_002797683.1| A/G-specific adenine glycosylase [Azotobacter vinelandii DJ]
gi|226717537|gb|ACO76708.1| A/G-specific adenine glycosylase [Azotobacter vinelandii DJ]
Length = 362
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + A E
Sbjct: 12 AWYDDHGRKDLPWQRDITPYRVWVSEIMLQQTQVATVLGYYERFMAALPTVQTLAAAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + IL+ E + P+++E L LPGIGR A I S+
Sbjct: 72 EVLHLWTGLGYYS-RARNLHKTAKILVAEHAGEFPRSVEALAELPGIGRSTAGAIASIGM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ ++ R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARYLAEDGHPGEPRAAKRLWEAAERFTPEARVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C +P C C +++ C+
Sbjct: 191 LCTRTRPSCLLCPLASGCRA 210
>gi|331654474|ref|ZP_08355474.1| A/G-specific adenine glycosylase [Escherichia coli M718]
gi|331047856|gb|EGI19933.1| A/G-specific adenine glycosylase [Escherichia coli M718]
Length = 355
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVATLHGGIFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|327482794|gb|AEA86104.1| A / G specific adenine glycosylase [Pseudomonas stutzeri DSM 4166]
Length = 355
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 86/214 (40%), Gaps = 13/214 (6%)
Query: 20 YTPKEL-EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+P++ + F + +L + + + V+ ++ Q+ V +
Sbjct: 1 MSPEQFGAAVLDWFDRH---GRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMD 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + A E ++ + +G Y ++ N+ + ++ E+ P ++ L LPG
Sbjct: 58 ALPTVEALAAAEEDEVLHLWTGLGYYS-RARNLHKTAKRVVTEYGGIFPANVDKLAELPG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IGR A I S++ G+ +D ++ R+ R G ++ + R+ P +
Sbjct: 117 IGRSTAGAIASISMGLRAPILDGNVKRVLARYVAQDGYPGEPKVARQLWEVAERLTPRQR 176
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C +P C C + + C+
Sbjct: 177 VNHYTQAMMDLGATLCTRSRPSCLLCPLRDGCRA 210
>gi|254038012|ref|ZP_04872070.1| adenine DNA glycosylase [Escherichia sp. 1_1_43]
gi|332280341|ref|ZP_08392754.1| adenine DNA glycosylase [Shigella sp. D9]
gi|226839636|gb|EEH71657.1| adenine DNA glycosylase [Escherichia sp. 1_1_43]
gi|332102693|gb|EGJ06039.1| adenine DNA glycosylase [Shigella sp. D9]
Length = 360
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|222529457|ref|YP_002573339.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
bescii DSM 6725]
gi|222456304|gb|ACM60566.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
bescii DSM 6725]
Length = 178
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 110/175 (62%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
++A +L+AQSTD VNK T LF+ T + +L+N I+ +G Y+ K+++I
Sbjct: 1 MIATILAAQSTDERVNKITAELFKKYPTLESFAEANISELENDIKPVGFYKNKAKSIKET 60
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
+ IL+ +++ +P T+E L +L G+GRK ANVI++ +GIP+I VDTH R+SNR+GL
Sbjct: 61 ARILVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYGIPSIIVDTHCKRLSNRLGLVN 120
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K K+E L +I+ P+ +V HGR VCKA KP+C+ C I ++C+ K
Sbjct: 121 SKDATKIEFELKKIVEPQLYTIFSNLMVYHGRAVCKAIKPRCEVCTIKDVCEYFK 175
>gi|189403763|ref|ZP_03007208.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4501]
gi|189369240|gb|EDU87656.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4501]
Length = 360
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|157162423|ref|YP_001459741.1| adenine DNA glycosylase [Escherichia coli HS]
gi|188492096|ref|ZP_02999366.1| A/G-specific adenine glycosylase [Escherichia coli 53638]
gi|157068103|gb|ABV07358.1| A/G-specific adenine glycosylase [Escherichia coli HS]
gi|188487295|gb|EDU62398.1| A/G-specific adenine glycosylase [Escherichia coli 53638]
Length = 360
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|312875857|ref|ZP_07735847.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311797338|gb|EFR13677.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 178
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 109/175 (62%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
++A +L+AQSTD VNK T LF+ T + +L+N I+ +G Y+ K+++I
Sbjct: 1 MIATILAAQSTDERVNKITAELFKKYPTLESFAEANISELENDIKPVGFYKNKAKSIKET 60
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
+ IL+ ++ +P T+E L +L G+GRK ANVI++ +GIP+I VDTH R+SNR+GL
Sbjct: 61 ARILVEKYSGTLPTTIEELVKLKGVGRKTANVIMANIYGIPSIIVDTHCKRLSNRLGLVN 120
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K K+E L +I+ P+ +V HGR VCKA KP+C+ C I ++C+ K
Sbjct: 121 SKDATKIEFELKKIVEPQLYTIFSNLMVYHGRAVCKAIKPKCEVCTIKDVCEYFK 175
>gi|323343229|ref|ZP_08083460.1| A/G-specific adenine glycosylase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463293|gb|EFY08488.1| A/G-specific adenine glycosylase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 327
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 76/207 (36%), Gaps = 11/207 (5%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K L + + + + V+ +++ Q+ + + + +
Sbjct: 5 ERLMGWYHENKRVLPFRSQKDPYKIWVSEIMAQQTQIATMIPYYDRWIKRYPDVETLANA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ +G YR ++ N+ + + ++ ++ +P + L ++PGIG ++ I S
Sbjct: 65 EIDEVLKMWEGLGYYR-RARNLHAGAQYVMEHYEGTLPADKKELMKIPGIGDYTSSAIAS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPG-------KTPNKVEQSLLRIIPPKHQYNAHYWLV 199
+AF +P I +D ++ R+ R + ++ + L+
Sbjct: 124 IAFSLPEIAIDGNVKRVMARYLNYTENVNTRACHKYFETFLKKELLLNGADPSDFTQALM 183
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
G VC C+ C +C +
Sbjct: 184 ELGALVCTPSNTNCEGCPFKEMCACYR 210
>gi|167043370|gb|ABZ08073.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_ANIW141O9]
Length = 217
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 108/180 (60%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F +++ +LSA++ D N KA K LF++ +TPQK+ K ++ I+++G Y KS
Sbjct: 33 SPFKILIGTVLSARTRDENTTKAVKGLFKVYNTPQKLANAKAKDVEKIIKSVGFYHVKSR 92
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
II +++I++ ++ K+P ++ L +PG+GRK AN +L AF P I VDTH+ RISNR
Sbjct: 93 RIIEVANIILTKYHGKVPADIDKLVEIPGVGRKTANCVLVYAFEKPAIPVDTHVHRISNR 152
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+GL KTP + E L + +P K+ + V++G+ +CK P C C I N C K
Sbjct: 153 LGLVDTKTPEETEMELRKKVPKKYWLPINNTFVMYGQNICKPISPMCSVCKIRNSCNYFK 212
>gi|313496650|gb|ADR58016.1| MutY [Pseudomonas putida BIRD-1]
Length = 355
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + E
Sbjct: 12 DWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + +++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAAKVVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P + + ++ G
Sbjct: 131 GIRAPILDGNVKRVLARYTAQAGYPGEPKVANQLWATAERFTPQQRANHYTQAMMDMGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPSCLICPLQHGCEA 210
>gi|145356817|ref|XP_001422621.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582864|gb|ABP00938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 245
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ ++V+ ++S Q+ V + + T + + +++ +G YR +++
Sbjct: 67 AYGILVSEIMSQQTQIERVAEYWRRWTARWPTAEALAEATIEEVNEEWAGLGYYR-RAKF 125
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+++ + + + K P+ +EGL+++PG+G A+ + S+AFG T VD +++R+ R
Sbjct: 126 LLNGAIYVRDALKGKYPRDVEGLSKIPGVGPYTASAVASIAFGAKTAAVDGNVYRVITRA 185
Query: 168 GLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G ++ + + + + + ++ G VC + P+C SC IS C
Sbjct: 186 KMIKGDPLKGDAAKEIRRVADAFVDAERPGDFNQAMMELGAMVCAPQNPKCDSCPISMWC 245
>gi|239916718|ref|YP_002956276.1| A/G-specific adenine glycosylase [Micrococcus luteus NCTC 2665]
gi|281414824|ref|ZP_06246566.1| A/G-specific adenine glycosylase [Micrococcus luteus NCTC 2665]
gi|239837925|gb|ACS29722.1| A/G-specific adenine glycosylase [Micrococcus luteus NCTC 2665]
Length = 313
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 11/220 (5%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNK 68
+P + ++ + + +L + + + ++V+ ++ Q+ V V
Sbjct: 5 PAPAPLVPPTVDVPRLHDAVLGWFAVHARDLPWRSPDCSPWGVLVSEIMLQQTPVVRVLP 64
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ E TP + + +G R+ + + ++ D ++P
Sbjct: 65 RWREWLERWPTPADLAVAPTADVLTAWDRLGYPRRSLR-LQEAARAVVERHDGRVPADPA 123
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLRI 185
L LPGIG A + S AFG+P VDT++ R+ R PG++ + E +
Sbjct: 124 ALRALPGIGEYTAAAVASFAFGVPETVVDTNVRRVIARAVAGEALPGRSLTRAEMRRAQA 183
Query: 186 IPPKHQ---YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ P+ + ++ G VC AR P C C ++ C
Sbjct: 184 LMPEDPARANAWNAAVMELGALVCTARSPACDRCPLAETC 223
>gi|237807732|ref|YP_002892172.1| A/G-specific adenine glycosylase [Tolumonas auensis DSM 9187]
gi|237499993|gb|ACQ92586.1| A/G-specific adenine glycosylase [Tolumonas auensis DSM 9187]
Length = 363
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 10/202 (4%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + V+ ++ Q+ V + E +
Sbjct: 21 QRLLTWYDIAGRKTLPWQQNKTPYRVWVSEIMLQQTQVSTVIPYYERFMERFPDVIALAD 80
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +G Y ++ N+ + ++ ++ + P+T + + LPGIGR A IL
Sbjct: 81 APQDEVLHLWTGLGYYA-RARNLHKAAQVIRDKHNGSFPETFDEVADLPGIGRSTAGAIL 139
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVL 200
S++ +D ++ R+ R G ++E L ++ P + + ++
Sbjct: 140 SLSLKQHHAILDGNVKRVLTRWLALEGWPGQKQIENELWDWAIKLTPAEGVEQYNQAIMD 199
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G +C KPQC+ C +++ C
Sbjct: 200 LGASLCSRTKPQCRICPMNDDC 221
>gi|39996550|ref|NP_952501.1| endonuclease III [Geobacter sulfurreducens PCA]
gi|39983431|gb|AAR34824.1| endonuclease III, putative [Geobacter sulfurreducens PCA]
Length = 209
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 109/192 (56%), Gaps = 3/192 (1%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+WPSP + N F ++V+ +LS ++ D A++ LF +ADTP M+ + +
Sbjct: 9 KQWPSPAVTIVSQREGNPFKVLVSCILSLRTQDRTTGPASERLFALADTPAAMVRLSKDD 68
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
++ I +G Y K+E I+ + +L+ +D +P L+ L G+GRK AN+++++ FG
Sbjct: 69 IEKAIYPVGFYHTKAEQILEICRVLLERYDGGVPDELDELLAFKGVGRKTANLVITLGFG 128
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P I VDTH+ RI NR G KTP + E SL RI+P ++ + +LV G+ C
Sbjct: 129 KPGICVDTHVHRICNRWGYIRTKTPEQTEFSLRRILPHRYWLVINDYLVTFGQNHCTPVS 188
Query: 211 PQCQSCIISNLC 222
P+C +C+++ C
Sbjct: 189 PRCSTCVLAQWC 200
>gi|90019986|ref|YP_525813.1| A/G-specific DNA-adenine glycosylase [Saccharophagus degradans
2-40]
gi|89949586|gb|ABD79601.1| A/G-specific DNA-adenine glycosylase [Saccharophagus degradans
2-40]
Length = 355
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 10/214 (4%)
Query: 23 KELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
K+ + + + L + + + ++ ++ Q+ V E
Sbjct: 2 KQTHPFAHKLLAWFDKHGRKNLPWQQPITPYRVWLSEIMLQQTQVETVIPYFNRFLERFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + + +G Y ++ N+ + + ++ + P T+E L LPGIG
Sbjct: 62 NLLDLAKAPQDDVLHLWTGLGYYA-RARNLHKCAQTIWENYNGEFPNTVEELASLPGIGP 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A I S+AF PT +D ++ R+ R G K + Q +P K +
Sbjct: 121 STAAAIASIAFEHPTAILDGNVKRVLARHHTVEGWPGQKPVENILWQHAHSHMPQKRCRD 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C KPQC +C ++ C+ Q
Sbjct: 181 YTQAIMDLGATLCTRSKPQCHACPVAQSCQAYAQ 214
>gi|74313630|ref|YP_312049.1| adenine DNA glycosylase [Shigella sonnei Ss046]
gi|73857107|gb|AAZ89814.1| adenine glycosylase [Shigella sonnei Ss046]
Length = 350
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|289668669|ref|ZP_06489744.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 357
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 13/223 (5%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATK 71
+ T E + + +L + + + ++ ++ Q+ V
Sbjct: 1 MPANRTTPSAEAFVDRLLHWFDDHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFN 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ A + + +G Y ++ N+ + + + ++P+ + L
Sbjct: 61 KFVARFPALADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVTLHGGELPRDFDALL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI----- 185
LPGIGR A ILS A+ P +D ++ R+ + +A +E+ L ++
Sbjct: 120 ALPGIGRSTAGAILSQAWNDPFAIMDGNVKRVLTRFHDIAGYPGLPVIEKQLWQLATTHV 179
Query: 186 --IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+P + + G +C KP C C + N C +
Sbjct: 180 AHVPAGRLADYTQAQMDFGATLCTRAKPACVLCPLQNDCSARR 222
>gi|117625188|ref|YP_854176.1| adenine DNA glycosylase [Escherichia coli APEC O1]
gi|218559952|ref|YP_002392865.1| adenine DNA glycosylase [Escherichia coli S88]
gi|115514312|gb|ABJ02387.1| A/G-specific adenine glycosylase [Escherichia coli APEC O1]
gi|218366721|emb|CAR04478.1| adenine DNA glycosylase [Escherichia coli S88]
gi|294489833|gb|ADE88589.1| A/G-specific adenine glycosylase [Escherichia coli IHE3034]
gi|307625464|gb|ADN69768.1| adenine DNA glycosylase [Escherichia coli UM146]
gi|315289509|gb|EFU48904.1| A/G-specific adenine glycosylase [Escherichia coli MS 110-3]
gi|323951601|gb|EGB47476.1| A/G-specific adenine glycosylase [Escherichia coli H252]
gi|323957314|gb|EGB53036.1| A/G-specific adenine glycosylase [Escherichia coli H263]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|312880816|ref|ZP_07740616.1| HhH-GPD family protein [Aminomonas paucivorans DSM 12260]
gi|310784107|gb|EFQ24505.1| HhH-GPD family protein [Aminomonas paucivorans DSM 12260]
Length = 360
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 8/199 (4%)
Query: 31 LFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L + +L + + ++++ +L Q+ E T + +
Sbjct: 12 LLLEWFAREGRDLPWRRTYRPYEVLLSEILLQQTRMEAAVPYFLRFLERFPTLEALAGAP 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+++ +G YR ++ + + L + P+ L LPG+G + S+
Sbjct: 72 EEEVLALWTGLGYYR-RARFLREAAARLNALGYREPPEDEGVLRSLPGLGSYTVGAVRSI 130
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTP----NKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
A+ +P VD ++ R+ R PG ++E L +IPP + + + G
Sbjct: 131 AYNLPAPAVDGNVVRVLARWFDLPGTFQGKGRKELEALALSLIPPGRARDCNQAFMELGA 190
Query: 204 YVCKARKPQCQSCIISNLC 222
VC P+C C + + C
Sbjct: 191 LVCVPSSPRCPVCPLVSCC 209
>gi|332999714|gb|EGK19299.1| A/G-specific adenine glycosylase [Shigella flexneri VA-6]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAPLPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|82778267|ref|YP_404616.1| adenine DNA glycosylase [Shigella dysenteriae Sd197]
gi|309785210|ref|ZP_07679841.1| A/G-specific adenine glycosylase [Shigella dysenteriae 1617]
gi|81242415|gb|ABB63125.1| adenine glycosylase [Shigella dysenteriae Sd197]
gi|308926330|gb|EFP71806.1| A/G-specific adenine glycosylase [Shigella dysenteriae 1617]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|331643655|ref|ZP_08344786.1| A/G-specific adenine glycosylase [Escherichia coli H736]
gi|323941953|gb|EGB38132.1| A/G-specific adenine glycosylase [Escherichia coli E482]
gi|331037126|gb|EGI09350.1| A/G-specific adenine glycosylase [Escherichia coli H736]
Length = 355
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|237753056|ref|ZP_04583536.1| A/G-specific adenine glycosylase [Helicobacter winghamensis ATCC
BAA-430]
gi|229375323|gb|EEO25414.1| A/G-specific adenine glycosylase [Helicobacter winghamensis ATCC
BAA-430]
Length = 326
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 24 ELEEIFYLFSLKWP-SPKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKH-LFE 75
+++++ + + + L + N + ++++ ++ Q+ V + + +
Sbjct: 2 QIKKLQTALLSWYQTNGRHSLPWRNKTLPNRPYAVLLSEIMLQQTQVKVVLERYFYPFLK 61
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E+++ + +G Y + + + +P + L +LPG
Sbjct: 62 KFPTLKALSQANEQEVLRAWQGLGYYTRARNLHK----LAQLCANTGLPTEVRDLIKLPG 117
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
IG A I + + VD++I RI R+ + T ++E+ ++ + +N +
Sbjct: 118 IGAYTAGAIACFGYDLSVSFVDSNIKRILTRLFVLRDPTQKQLERQANTLLNLQDSFNHN 177
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G +C A+ P+C C + CK
Sbjct: 178 QALLDLGALICTAKSPKCDICPLQKFCK 205
>gi|157156921|ref|YP_001464315.1| adenine DNA glycosylase [Escherichia coli E24377A]
gi|157078951|gb|ABV18659.1| A/G-specific adenine glycosylase [Escherichia coli E24377A]
Length = 360
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|313114648|ref|ZP_07800155.1| putative A/G-specific adenine glycosylase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623051|gb|EFQ06499.1| putative A/G-specific adenine glycosylase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 347
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E I + L + + + ++ ++ Q+ +
Sbjct: 1 MENISPALLDWFYKNHRILPFRTDPSPYHVWLSEIMLQQTRVSAALPYYERFLAALPDIP 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E+KL +G Y + N+ + I+ ++ ++P + L LPGIG A
Sbjct: 61 ALAACEEEKLHKLWEGLGYYS-RVRNLQKAARIVCEQYGGQLPADYDALRALPGIGDYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
+ S++FGIP VD ++ R+ +R+ ++ PP + +
Sbjct: 120 GAVASISFGIPVPAVDGNVLRVFSRLYNDPAAVTEPAVKKAFTARVMEHQPPDAPGDYNQ 179
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLC 222
L+ G VC P C+ C +++LC
Sbjct: 180 ALMELGALVCVPNGAPLCEKCPLAHLC 206
>gi|270284103|ref|ZP_05965545.2| A/G-specific adenine glycosylase [Bifidobacterium gallicum DSM
20093]
gi|270277099|gb|EFA22953.1| A/G-specific adenine glycosylase [Bifidobacterium gallicum DSM
20093]
Length = 409
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++ + ++ W +L + + ++V+ ++S Q+ V
Sbjct: 88 REEQRDDVRHRLAVWWEVSARDLPWRFGRTTPWGVLVSEVMSQQTQMSRVVPYWTAWMNQ 147
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + A + + +G R+ + + ++ +++D+ +P+T + LT LPGI
Sbjct: 148 WPDARSLAAAAKADVIAAWGRLGYPRRALR-LQECAQVVASQYDDVLPRTYDELTALPGI 206
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
G A+ ++S AFG +DT+I R+ +R+ + ++ + +A
Sbjct: 207 GDYTASAVMSFAFGERIAVIDTNIRRVLSRVFVGEESLGGAASRAERELAWELLPQDAAQ 266
Query: 197 WL------VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + G VC A+ P C+SC I C +++
Sbjct: 267 SVVWNESVMELGAVVCTAKAPLCESCPIRECCLFLQR 303
>gi|26249383|ref|NP_755423.1| adenine DNA glycosylase [Escherichia coli CFT073]
gi|26109791|gb|AAN81996.1|AE016766_84 A/G-specific adenine glycosylase [Escherichia coli CFT073]
Length = 360
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMVRFPTVTDLANAPLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|218706479|ref|YP_002413998.1| adenine DNA glycosylase [Escherichia coli UMN026]
gi|293406471|ref|ZP_06650397.1| adenine DNA glycosylase [Escherichia coli FVEC1412]
gi|298382208|ref|ZP_06991805.1| A/G-specific adenine glycosylase [Escherichia coli FVEC1302]
gi|300897564|ref|ZP_07115975.1| A/G-specific adenine glycosylase [Escherichia coli MS 198-1]
gi|301027954|ref|ZP_07191240.1| A/G-specific adenine glycosylase [Escherichia coli MS 196-1]
gi|218433576|emb|CAR14479.1| adenine DNA glycosylase [Escherichia coli UMN026]
gi|291426477|gb|EFE99509.1| adenine DNA glycosylase [Escherichia coli FVEC1412]
gi|298277348|gb|EFI18864.1| A/G-specific adenine glycosylase [Escherichia coli FVEC1302]
gi|299878959|gb|EFI87170.1| A/G-specific adenine glycosylase [Escherichia coli MS 196-1]
gi|300358682|gb|EFJ74552.1| A/G-specific adenine glycosylase [Escherichia coli MS 198-1]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|15803500|ref|NP_289533.1| adenine DNA glycosylase [Escherichia coli O157:H7 EDL933]
gi|15833091|ref|NP_311864.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. Sakai]
gi|168747546|ref|ZP_02772568.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4113]
gi|168753914|ref|ZP_02778921.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4401]
gi|168766969|ref|ZP_02791976.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4486]
gi|168773399|ref|ZP_02798406.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4196]
gi|168781821|ref|ZP_02806828.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4076]
gi|168785820|ref|ZP_02810827.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC869]
gi|168797537|ref|ZP_02822544.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC508]
gi|195937100|ref|ZP_03082482.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. EC4024]
gi|208806341|ref|ZP_03248678.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4206]
gi|208812668|ref|ZP_03253997.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4045]
gi|208820767|ref|ZP_03261087.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4042]
gi|209395967|ref|YP_002272442.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4115]
gi|217327769|ref|ZP_03443852.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
TW14588]
gi|254794914|ref|YP_003079751.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. TW14359]
gi|261226274|ref|ZP_05940555.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256468|ref|ZP_05949001.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. FRIK966]
gi|291284282|ref|YP_003501100.1| A/G-specific adenine glycosylase [Escherichia coli O55:H7 str.
CB9615]
gi|12517510|gb|AAG58092.1|AE005526_5 adenine glycosylase; G.C --> T.A transversions [Escherichia coli
O157:H7 str. EDL933]
gi|13363309|dbj|BAB37260.1| adenine glycosylase [Escherichia coli O157:H7 str. Sakai]
gi|187770880|gb|EDU34724.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4196]
gi|188017895|gb|EDU56017.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4113]
gi|189000578|gb|EDU69564.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4076]
gi|189358556|gb|EDU76975.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4401]
gi|189363704|gb|EDU82123.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4486]
gi|189374187|gb|EDU92603.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC869]
gi|189379791|gb|EDU98207.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC508]
gi|208726142|gb|EDZ75743.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4206]
gi|208733945|gb|EDZ82632.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4045]
gi|208740890|gb|EDZ88572.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4042]
gi|209157367|gb|ACI34800.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC4115]
gi|209759948|gb|ACI78286.1| adenine glycosylase [Escherichia coli]
gi|209759950|gb|ACI78287.1| adenine glycosylase [Escherichia coli]
gi|209759952|gb|ACI78288.1| adenine glycosylase [Escherichia coli]
gi|209759954|gb|ACI78289.1| adenine glycosylase [Escherichia coli]
gi|209759956|gb|ACI78290.1| adenine glycosylase [Escherichia coli]
gi|217320136|gb|EEC28561.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
TW14588]
gi|254594314|gb|ACT73675.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. TW14359]
gi|290764155|gb|ADD58116.1| A/G-specific adenine glycosylase [Escherichia coli O55:H7 str.
CB9615]
gi|320189311|gb|EFW63970.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
EC1212]
gi|320640608|gb|EFX10147.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. G5101]
gi|320645855|gb|EFX14840.1| adenine DNA glycosylase [Escherichia coli O157:H- str. 493-89]
gi|320651155|gb|EFX19595.1| adenine DNA glycosylase [Escherichia coli O157:H- str. H 2687]
gi|320662170|gb|EFX29571.1| adenine DNA glycosylase [Escherichia coli O55:H7 str. USDA 5905]
gi|320667245|gb|EFX34208.1| adenine DNA glycosylase [Escherichia coli O157:H7 str. LSU-61]
gi|326338950|gb|EGD62765.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
1044]
gi|326343168|gb|EGD66936.1| A/G-specific adenine glycosylase [Escherichia coli O157:H7 str.
1125]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|161527564|ref|YP_001581390.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
gi|160338865|gb|ABX11952.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
Length = 218
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 104/179 (58%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F++++ +LSA++ D + K K LF P+++ K ++ I++IG Y KS+
Sbjct: 35 PFSILIGTILSARTKDESTTKVVKVLFSKYKNPKQLANAKLKDVEKIIKSIGFYHVKSKR 94
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
II ++ I+ +++ K+P+ L+ L +LPG+GRK AN +L AF P I VD H+ RISNR+
Sbjct: 95 IIEVAKIIDSKYKGKVPEDLDTLVQLPGVGRKTANCVLVYAFEKPAIPVDIHVHRISNRL 154
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
GL K P + EQ L++ + K + + V++G+ +CK P C C I CK K
Sbjct: 155 GLVETKNPEETEQELMKKVDKKFWIDINDTFVMYGQNICKPISPMCDVCKIKRSCKFYK 213
>gi|82545416|ref|YP_409363.1| adenine DNA glycosylase [Shigella boydii Sb227]
gi|209920421|ref|YP_002294505.1| adenine DNA glycosylase [Escherichia coli SE11]
gi|256019233|ref|ZP_05433098.1| adenine DNA glycosylase [Shigella sp. D9]
gi|300906473|ref|ZP_07124169.1| A/G-specific adenine glycosylase [Escherichia coli MS 84-1]
gi|301306572|ref|ZP_07212634.1| A/G-specific adenine glycosylase [Escherichia coli MS 124-1]
gi|81246827|gb|ABB67535.1| adenine glycosylase [Shigella boydii Sb227]
gi|209913680|dbj|BAG78754.1| adenine glycosylase [Escherichia coli SE11]
gi|300401754|gb|EFJ85292.1| A/G-specific adenine glycosylase [Escherichia coli MS 84-1]
gi|300838190|gb|EFK65950.1| A/G-specific adenine glycosylase [Escherichia coli MS 124-1]
gi|315256855|gb|EFU36823.1| A/G-specific adenine glycosylase [Escherichia coli MS 85-1]
gi|320174041|gb|EFW49211.1| A/G-specific adenine glycosylase [Shigella dysenteriae CDC 74-1112]
gi|320184309|gb|EFW59121.1| A/G-specific adenine glycosylase [Shigella flexneri CDC 796-83]
gi|323167973|gb|EFZ53662.1| A/G-specific adenine glycosylase [Shigella sonnei 53G]
gi|324017195|gb|EGB86414.1| A/G-specific adenine glycosylase [Escherichia coli MS 117-3]
gi|324119759|gb|EGC13639.1| A/G-specific adenine glycosylase [Escherichia coli E1167]
gi|332091345|gb|EGI96433.1| A/G-specific adenine glycosylase [Shigella boydii 3594-74]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|123505745|ref|XP_001329048.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121911998|gb|EAY16825.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 238
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 8/193 (4%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTPQKMLAIGEKKLQNYI 95
PK E F +++++LS+ + D + A + L ++ ++ + I
Sbjct: 39 DPKTE-----RFQTLISLMLSSMTKDQQTSAAVRKLQQMEGGLNAPNLMKADYDVVLECI 93
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN-VILSMAFGIPTI 154
+++G +KK+ II + I ++++ IP+TL+ LT G+G K + I
Sbjct: 94 KSVGFAKKKAGYIIEAAKICHEKYNDDIPKTLKELTSFNGVGVKMGTLAMAHCWGEQIGI 153
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
GVD H+ RISN +G K P+ E +L +I+P + ++ LV G+ +C A+KP+C
Sbjct: 154 GVDVHVHRISNLLGWVKTKKPDDTELALQKILPKEIWSEVNHTLVGFGQTICDAKKPKCD 213
Query: 215 SCIISNLCKRIKQ 227
C I + C +++
Sbjct: 214 ECPIKDTCPALQR 226
>gi|301019353|ref|ZP_07183538.1| A/G-specific adenine glycosylase [Escherichia coli MS 69-1]
gi|300399293|gb|EFJ82831.1| A/G-specific adenine glycosylase [Escherichia coli MS 69-1]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHSGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|283778133|ref|YP_003368888.1| HhH-GPD family protein [Pirellula staleyi DSM 6068]
gi|283436586|gb|ADB15028.1| HhH-GPD family protein [Pirellula staleyi DSM 6068]
Length = 398
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 88/236 (37%), Gaps = 10/236 (4%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKEL-EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVL 56
M + S S + T ++ + +L + + + + ++ +
Sbjct: 1 MPQRRASREPDSPSDKTWIETDRKALARFQQRMLAWFAEHARDLPWRRSRDLYRIWISEV 60
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + T + E+++ +G YR ++ ++ + + ++
Sbjct: 61 MLQQTQVATVIDYFQRFLVEFPTVVHLAEADEQQVLRQWEGLGYYR-RARSLHAAAKKIV 119
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAP 171
++F + P+TL+ + LPGIGR A ILS+ ++ + R+ R
Sbjct: 120 HDFRGQFPETLDEVMSLPGIGRYTAGAILSIGLDAKLPILEANTIRVYARLAGYTREATS 179
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +I+P K + ++ G +C R P C C S C ++
Sbjct: 180 TAGQKFLWNIAEQILPDKKVGFFNQAMMELGSALCTPRTPSCDQCPASTWCVARRE 235
>gi|218550211|ref|YP_002384002.1| adenine DNA glycosylase [Escherichia fergusonii ATCC 35469]
gi|218357752|emb|CAQ90396.1| adenine DNA glycosylase [Escherichia fergusonii ATCC 35469]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T + + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 EC 208
>gi|260581573|ref|ZP_05849370.1| A/G-specific adenine glycosylase [Haemophilus influenzae NT127]
gi|260095166|gb|EEW79057.1| A/G-specific adenine glycosylase [Haemophilus influenzae NT127]
Length = 378
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P + + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFDQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWTLTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|198277147|ref|ZP_03209678.1| hypothetical protein BACPLE_03355 [Bacteroides plebeius DSM 17135]
gi|198269645|gb|EDY93915.1| hypothetical protein BACPLE_03355 [Bacteroides plebeius DSM 17135]
Length = 365
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 11/202 (5%)
Query: 34 LKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ K +L + + + + ++ ++ Q+ V E + + E +
Sbjct: 21 DWYKENKRDLPWRDTKDPYKIWISEIILQQTRVVQGYDYYCRFMEHFPDVETLAKASEDE 80
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y + + I P E + L G+G A I S A+
Sbjct: 81 VMKCWQGLGYYSRARNLHEAARTIAEKGAF---PVRYEEVRALKGVGDYTAAAICSFAYD 137
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLHGRYV 205
+P VD +++R+ +R + ++ + ++ G
Sbjct: 138 MPYAVVDGNVYRVLSRWLGVEEPIDTGAGKKLYASLADEMMDKSRPALYNQAIMDFGALQ 197
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C P C C +S+ C +++
Sbjct: 198 CVPSSPSCLFCPLSDSCVALQK 219
>gi|16130862|ref|NP_417436.1| adenine DNA glycosylase [Escherichia coli str. K-12 substr. MG1655]
gi|89109738|ref|AP_003518.1| adenine DNA glycosylase [Escherichia coli str. K-12 substr. W3110]
gi|170018798|ref|YP_001723752.1| adenine DNA glycosylase [Escherichia coli ATCC 8739]
gi|170082513|ref|YP_001731833.1| adenine DNA glycosylase [Escherichia coli str. K-12 substr. DH10B]
gi|238902083|ref|YP_002927879.1| adenine DNA glycosylase [Escherichia coli BW2952]
gi|253772200|ref|YP_003035031.1| adenine DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162871|ref|YP_003045979.1| adenine DNA glycosylase [Escherichia coli B str. REL606]
gi|260857097|ref|YP_003230988.1| adenine DNA glycosylase MutY [Escherichia coli O26:H11 str. 11368]
gi|260869651|ref|YP_003236053.1| adenine DNA glycosylase MutY [Escherichia coli O111:H- str. 11128]
gi|297521121|ref|ZP_06939507.1| adenine DNA glycosylase [Escherichia coli OP50]
gi|300947694|ref|ZP_07161863.1| A/G-specific adenine glycosylase [Escherichia coli MS 116-1]
gi|300954190|ref|ZP_07166655.1| A/G-specific adenine glycosylase [Escherichia coli MS 175-1]
gi|301330471|ref|ZP_07223087.1| A/G-specific adenine glycosylase [Escherichia coli MS 78-1]
gi|301643683|ref|ZP_07243722.1| A/G-specific adenine glycosylase [Escherichia coli MS 146-1]
gi|307139647|ref|ZP_07499003.1| adenine DNA glycosylase [Escherichia coli H736]
gi|312972794|ref|ZP_07786967.1| A/G-specific adenine glycosylase [Escherichia coli 1827-70]
gi|127559|sp|P17802|MUTY_ECOLI RecName: Full=A/G-specific adenine glycosylase
gi|42073|emb|CAA36624.1| unnamed protein product [Escherichia coli K-12]
gi|146864|gb|AAA72957.1| A/G-specific adenine glycosylase [Escherichia coli]
gi|882490|gb|AAA69128.1| CG Site No. 18130; alternate name micA [Escherichia coli str. K-12
substr. MG1655]
gi|1789331|gb|AAC75998.1| adenine DNA glycosylase [Escherichia coli str. K-12 substr. MG1655]
gi|85675771|dbj|BAE77024.1| adenine DNA glycosylase [Escherichia coli str. K12 substr. W3110]
gi|169753726|gb|ACA76425.1| A/G-specific adenine glycosylase [Escherichia coli ATCC 8739]
gi|169890348|gb|ACB04055.1| adenine DNA glycosylase [Escherichia coli str. K-12 substr. DH10B]
gi|238859929|gb|ACR61927.1| adenine DNA glycosylase [Escherichia coli BW2952]
gi|242378487|emb|CAQ33271.1| adenine glycosylase; G.C--> T.A transversions [Escherichia coli
BL21(DE3)]
gi|253323244|gb|ACT27846.1| A/G-specific adenine glycosylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974772|gb|ACT40443.1| adenine DNA glycosylase [Escherichia coli B str. REL606]
gi|253978938|gb|ACT44608.1| adenine DNA glycosylase [Escherichia coli BL21(DE3)]
gi|257755746|dbj|BAI27248.1| adenine DNA glycosylase MutY [Escherichia coli O26:H11 str. 11368]
gi|257766007|dbj|BAI37502.1| adenine DNA glycosylase MutY [Escherichia coli O111:H- str. 11128]
gi|260447996|gb|ACX38418.1| A/G-specific adenine glycosylase [Escherichia coli DH1]
gi|284922904|emb|CBG35993.1| A/G-specific adenine glycosylase [Escherichia coli 042]
gi|300318774|gb|EFJ68558.1| A/G-specific adenine glycosylase [Escherichia coli MS 175-1]
gi|300452740|gb|EFK16360.1| A/G-specific adenine glycosylase [Escherichia coli MS 116-1]
gi|300843554|gb|EFK71314.1| A/G-specific adenine glycosylase [Escherichia coli MS 78-1]
gi|301077885|gb|EFK92691.1| A/G-specific adenine glycosylase [Escherichia coli MS 146-1]
gi|309703316|emb|CBJ02652.1| A/G-specific adenine glycosylase [Escherichia coli ETEC H10407]
gi|310332736|gb|EFP99949.1| A/G-specific adenine glycosylase [Escherichia coli 1827-70]
gi|315137558|dbj|BAJ44717.1| adenine DNA glycosylase [Escherichia coli DH1]
gi|315614876|gb|EFU95514.1| A/G-specific adenine glycosylase [Escherichia coli 3431]
gi|323154674|gb|EFZ40873.1| A/G-specific adenine glycosylase [Escherichia coli EPECa14]
gi|323180425|gb|EFZ65977.1| A/G-specific adenine glycosylase [Escherichia coli 1180]
gi|323936036|gb|EGB32331.1| A/G-specific adenine glycosylase [Escherichia coli E1520]
gi|323971752|gb|EGB66979.1| A/G-specific adenine glycosylase [Escherichia coli TA007]
gi|332344862|gb|AEE58196.1| A/G-specific adenine glycosylase MutY [Escherichia coli UMNK88]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|320195081|gb|EFW69710.1| A/G-specific adenine glycosylase [Escherichia coli WV_060327]
Length = 350
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|289661715|ref|ZP_06483296.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 357
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 81/223 (36%), Gaps = 13/223 (5%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATK 71
+ T E + + +L + + + ++ ++ Q+ V
Sbjct: 1 MPANRTTPSAEAFVDRLLHWFDDHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFN 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ A + + +G Y ++ N+ + + + ++P+ + L
Sbjct: 61 KFVARFPALADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVTLHGGELPRDFDALL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI----- 185
LPGIGR A ILS A+ P +D ++ R+ + G+A +E+ L ++
Sbjct: 120 ALPGIGRSTAGAILSQAWNDPFAIMDGNVKRVLTRFHGIAGYPGLPVIEKQLWQLATTHV 179
Query: 186 --IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+P + + G +C KP C C + N C +
Sbjct: 180 AHVPAGRLADYTQAQMDFGATLCTRAKPACVLCPLQNDCSARR 222
>gi|332086899|gb|EGI92035.1| A/G-specific adenine glycosylase [Shigella boydii 5216-82]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|218701675|ref|YP_002409304.1| adenine DNA glycosylase [Escherichia coli IAI39]
gi|218371661|emb|CAR19502.1| adenine DNA glycosylase [Escherichia coli IAI39]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|300929956|ref|ZP_07145394.1| A/G-specific adenine glycosylase [Escherichia coli MS 187-1]
gi|300462132|gb|EFK25625.1| A/G-specific adenine glycosylase [Escherichia coli MS 187-1]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|323960899|gb|EGB56519.1| A/G-specific adenine glycosylase [Escherichia coli H489]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|26987028|ref|NP_742453.1| A/G-specific adenine glycosylase [Pseudomonas putida KT2440]
gi|24981647|gb|AAN65917.1|AE016219_10 A/G specific adenine glycosylase [Pseudomonas putida KT2440]
Length = 355
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + E
Sbjct: 12 DWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + +++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAAKVVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P + + ++ G
Sbjct: 131 GIRAPILDGNVKRVLARYTAQAGYPGEPKVANQLWATAERFTPQQRANHYTQAMMDMGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLICPLQRGCEA 210
>gi|145628356|ref|ZP_01784157.1| A/G-specific adenine glycosylase [Haemophilus influenzae 22.1-21]
gi|144980131|gb|EDJ89790.1| A/G-specific adenine glycosylase [Haemophilus influenzae 22.1-21]
Length = 378
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWALTEKVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|331678955|ref|ZP_08379629.1| A/G-specific adenine glycosylase [Escherichia coli H591]
gi|323946674|gb|EGB42696.1| A/G-specific adenine glycosylase [Escherichia coli H120]
gi|331073785|gb|EGI45106.1| A/G-specific adenine glycosylase [Escherichia coli H591]
Length = 355
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|293412323|ref|ZP_06655046.1| adenine DNA glycosylase [Escherichia coli B354]
gi|291469094|gb|EFF11585.1| adenine DNA glycosylase [Escherichia coli B354]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHSGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSERVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|227888517|ref|ZP_04006322.1| adenine DNA glycosylase [Escherichia coli 83972]
gi|222034656|emb|CAP77398.1| A/G-specific adenine glycosylase [Escherichia coli LF82]
gi|227834786|gb|EEJ45252.1| adenine DNA glycosylase [Escherichia coli 83972]
gi|307554943|gb|ADN47718.1| adenine DNA glycosylase [Escherichia coli ABU 83972]
gi|312947493|gb|ADR28320.1| adenine DNA glycosylase [Escherichia coli O83:H1 str. NRG 857C]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMVRFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAVLPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|55670670|pdb|1WEF|A Chain A, Catalytic Domain Of Muty From Escherichia Coli K20a Mutant
gi|55670672|pdb|1WEI|A Chain A, Catalytic Domain Of Muty From Escherichia Coli K20a Mutant
Complexed To Adenine
Length = 225
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 7/195 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
K+ + + ++ ++ Q+ V + T + ++
Sbjct: 15 DKYGRATLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVL 74
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ N+ + + K P+T E + LPG+GR A ILS++ G
Sbjct: 75 HLWTGLGYYA-RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKH 133
Query: 153 TIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R+ R G +VE L + P + ++ G +C
Sbjct: 134 FPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICT 193
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + N C
Sbjct: 194 RSKPKCSLCPLQNGC 208
>gi|256024529|ref|ZP_05438394.1| adenine DNA glycosylase [Escherichia sp. 4_1_40B]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|225388544|ref|ZP_03758268.1| hypothetical protein CLOSTASPAR_02280 [Clostridium asparagiforme
DSM 15981]
gi|225045389|gb|EEG55635.1| hypothetical protein CLOSTASPAR_02280 [Clostridium asparagiforme
DSM 15981]
Length = 369
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 10/211 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ L+ + + L + + + + ++ ++ Q+ V +
Sbjct: 20 RQQRLKAMARPLLSWYEGHARALPWRDDPTPYRVWISEIMLQQTRVEAVKPYFERFMAAL 79
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T Q + A+ + +L +G Y ++ N+ + ++ ++P + E L LPGIG
Sbjct: 80 PTVQALAAVEDDRLMKLWEGLGYYT-RARNLKKAALMITERHGGELPGSYEALLALPGIG 138
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQY 192
A I S+AFG+P VD ++ R+ +R+ + ++E+ L I+P +
Sbjct: 139 SYTAGAIASIAFGLPVPAVDGNVLRVISRVLADREDIRQPSVKARMERELREIMPRERTS 198
Query: 193 NAHYWLVLHGRYVCKARK-PQCQSCIISNLC 222
+ L+ G VC P+C C + ++C
Sbjct: 199 QYNQGLIEVGAIVCVPGGEPRCGECPMESIC 229
>gi|281202379|gb|EFA76584.1| putative endonuclease III [Polysphondylium pallidum PN500]
Length = 470
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 88/175 (50%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA LLS+Q+ D A L T ++A + ++ + + Y++K+ +
Sbjct: 267 FHVLVACLLSSQTKDAVTYAAMNKLKAHGLTVDNIIATSHETIETLLYPVSFYKRKAIYL 326
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ +I+ ++ IP+ + LPGIG K N+I+ + I VD H+ RI NR+G
Sbjct: 327 KKIVNIMKEKYKGDIPEAYNDIMSLPGIGLKMTNLIVQAWGRVEGIAVDVHMHRICNRLG 386
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
TP + ++L +P + LV G+ VC +P+C+SC I++LC
Sbjct: 387 WVNTNTPEETTKALQDWVPRDRWAEINKLLVGFGQTVCAPTRPKCESCKINHLCP 441
>gi|325498521|gb|EGC96380.1| adenine DNA glycosylase [Escherichia fergusonii ECD227]
Length = 352
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 30 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ +D ++ R+
Sbjct: 89 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLSKHFPILDGNVKRVLA 148
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 149 RCYAVNGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 208
Query: 221 LC 222
C
Sbjct: 209 GC 210
>gi|327412901|emb|CAX67915.1| A/G-specific adenine glycosylase [Salmonella bongori]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KSPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLAKAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ K PQT + + LPG+GR A +LS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVVALHGGKFPQTFDEVAALPGVGRSTAGAVLSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + ++ G VC KP+C C + +
Sbjct: 147 RCYAISGWPGKKEVENALWSLSEQVTPAHGVERFNQAMMDLGAMVCTRSKPKCSLCPLQS 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|191167918|ref|ZP_03029721.1| A/G-specific adenine glycosylase [Escherichia coli B7A]
gi|193067254|ref|ZP_03048222.1| A/G-specific adenine glycosylase [Escherichia coli E110019]
gi|218555520|ref|YP_002388433.1| adenine DNA glycosylase [Escherichia coli IAI1]
gi|218696559|ref|YP_002404226.1| adenine DNA glycosylase [Escherichia coli 55989]
gi|300815567|ref|ZP_07095791.1| A/G-specific adenine glycosylase [Escherichia coli MS 107-1]
gi|307310418|ref|ZP_07590066.1| A/G-specific adenine glycosylase [Escherichia coli W]
gi|309794051|ref|ZP_07688476.1| A/G-specific adenine glycosylase [Escherichia coli MS 145-7]
gi|190902003|gb|EDV61749.1| A/G-specific adenine glycosylase [Escherichia coli B7A]
gi|192959211|gb|EDV89646.1| A/G-specific adenine glycosylase [Escherichia coli E110019]
gi|218353291|emb|CAU99258.1| adenine DNA glycosylase [Escherichia coli 55989]
gi|218362288|emb|CAQ99909.1| adenine DNA glycosylase [Escherichia coli IAI1]
gi|300531496|gb|EFK52558.1| A/G-specific adenine glycosylase [Escherichia coli MS 107-1]
gi|306909313|gb|EFN39808.1| A/G-specific adenine glycosylase [Escherichia coli W]
gi|308122458|gb|EFO59720.1| A/G-specific adenine glycosylase [Escherichia coli MS 145-7]
gi|315062267|gb|ADT76594.1| adenine DNA glycosylase [Escherichia coli W]
gi|320202629|gb|EFW77199.1| A/G-specific adenine glycosylase [Escherichia coli EC4100B]
gi|323183534|gb|EFZ68931.1| A/G-specific adenine glycosylase [Escherichia coli 1357]
gi|323377149|gb|ADX49417.1| A/G-specific adenine glycosylase [Escherichia coli KO11]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|260592614|ref|ZP_05858072.1| A/G-specific adenine glycosylase [Prevotella veroralis F0319]
gi|260535384|gb|EEX18001.1| A/G-specific adenine glycosylase [Prevotella veroralis F0319]
Length = 343
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 71/204 (34%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
L + + + L + + + + ++ ++ Q+ V +H T + E
Sbjct: 7 LLLWYDNNERPLPWRETKDAYAIWLSEVILQQTRIVQGMSYWQHFMRQWPTVYDLANASE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ + + L +L G+G A I S A
Sbjct: 67 DEVLKAWQGLGYYSRARNLHKAAQQVVELKGFPHTAK---ELKKLKGVGEYTAAAIASFA 123
Query: 149 FGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F VD +++R+ +R + + + ++P + ++ G
Sbjct: 124 FDEKIAVVDGNVYRVLSRYKGIDTPIDTTSGKKEFQSLSQTLLPTHDSARYNQAIMDFGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C P C C + C ++
Sbjct: 184 IQCTPTSPHCDICPLCESCVAFRE 207
>gi|215488259|ref|YP_002330690.1| adenine DNA glycosylase [Escherichia coli O127:H6 str. E2348/69]
gi|312964775|ref|ZP_07779015.1| A/G-specific adenine glycosylase [Escherichia coli 2362-75]
gi|215266331|emb|CAS10762.1| adenine DNA glycosylase [Escherichia coli O127:H6 str. E2348/69]
gi|281179973|dbj|BAI56303.1| adenine glycosylase [Escherichia coli SE15]
gi|312290331|gb|EFR18211.1| A/G-specific adenine glycosylase [Escherichia coli 2362-75]
gi|323188644|gb|EFZ73929.1| A/G-specific adenine glycosylase [Escherichia coli RN587/1]
gi|324005499|gb|EGB74718.1| A/G-specific adenine glycosylase [Escherichia coli MS 57-2]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|300980151|ref|ZP_07174863.1| A/G-specific adenine glycosylase [Escherichia coli MS 45-1]
gi|301049242|ref|ZP_07196216.1| A/G-specific adenine glycosylase [Escherichia coli MS 185-1]
gi|300298975|gb|EFJ55360.1| A/G-specific adenine glycosylase [Escherichia coli MS 185-1]
gi|300409352|gb|EFJ92890.1| A/G-specific adenine glycosylase [Escherichia coli MS 45-1]
gi|315293943|gb|EFU53295.1| A/G-specific adenine glycosylase [Escherichia coli MS 153-1]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMVRFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|62185010|ref|YP_219795.1| putative A/G-specific adenine glycosylase [Chlamydophila abortus
S26/3]
gi|62148077|emb|CAH63832.1| putative A/G-specific adenine glycosylase [Chlamydophila abortus
S26/3]
Length = 369
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + K + + + + V+ ++ Q+ V K +
Sbjct: 8 ERAKNFPIGKLKQWFIENKRSFPWRDDPSPYNVWVSEVMLQQTRAEVVVKYFIEWMKKFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E+ + +G Y + N++ + +++ +F K+P L ++ G+G
Sbjct: 68 TIESLATANEEDVIKAWEGLGYYT-RVRNLLHGARMVMTDFGGKLPDDPLDLMQIKGLGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYN 193
+ IL+ AF T VD ++ R+ +R+ L T V + +L +P +
Sbjct: 127 YTVHAILAFAFKRRTAAVDGNVLRVISRVFLIDASIDLESTKTWVFRIVLSFLPAEDPQV 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK R P+C C + ++C K+
Sbjct: 187 IAEALIELGACICK-RAPKCDICPLQSICGAFKE 219
>gi|323978744|gb|EGB73825.1| A/G-specific adenine glycosylase [Escherichia coli TW10509]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 10/198 (5%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + L + + + ++ ++ Q+ V + T +
Sbjct: 12 DWYDKYGRKSLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLD 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + K P+T E + LPG+GR A ILS++
Sbjct: 72 EVLHLWTGLGYYA-RARNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSL 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
G +D ++ R+ R G +VE L + P + ++ G
Sbjct: 131 GKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAM 190
Query: 205 VCKARKPQCQSCIISNLC 222
+C KP+C C + N C
Sbjct: 191 ICTRSKPKCSLCPLQNGC 208
>gi|89074117|ref|ZP_01160616.1| putative A/G-specific adenine glycosylase [Photobacterium sp.
SKA34]
gi|89050053|gb|EAR55579.1| putative A/G-specific adenine glycosylase [Photobacterium sp.
SKA34]
Length = 354
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 30 YLFSLKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + ++ ++ Q+ V + E T Q + A
Sbjct: 7 DAILAWYDKFGRKTLPWQQNKTPYKVWLSEIMLQQTQVATVIPYFESFMERFPTVQDLAA 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +G Y ++ N+ + ++++E + P + + LPGIGR A +L
Sbjct: 67 AEQDEVLHLWTGLGYYA-RARNLHKAAQLIVSEHNGIFPTDIVQVQALPGIGRSTAGAVL 125
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVL 200
S++ +D ++ R R G K+ Q P + ++
Sbjct: 126 SLSLAQHHPILDGNVKRTLARCYAIEGWPGKKIVENKLWQIAETNTPEMGVERYNQAMMD 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C KP+C+ C +S C +K+
Sbjct: 186 MGAMICTRSKPKCELCPVSTQCIALKE 212
>gi|193063588|ref|ZP_03044677.1| A/G-specific adenine glycosylase [Escherichia coli E22]
gi|194426289|ref|ZP_03058844.1| A/G-specific adenine glycosylase [Escherichia coli B171]
gi|260845634|ref|YP_003223412.1| adenine DNA glycosylase MutY [Escherichia coli O103:H2 str. 12009]
gi|293449294|ref|ZP_06663715.1| adenine DNA glycosylase [Escherichia coli B088]
gi|300824802|ref|ZP_07104906.1| A/G-specific adenine glycosylase [Escherichia coli MS 119-7]
gi|331669708|ref|ZP_08370554.1| A/G-specific adenine glycosylase [Escherichia coli TA271]
gi|192930865|gb|EDV83470.1| A/G-specific adenine glycosylase [Escherichia coli E22]
gi|194415597|gb|EDX31864.1| A/G-specific adenine glycosylase [Escherichia coli B171]
gi|195183154|dbj|BAG66699.1| adenine DNA glycosylase [Escherichia coli O111:H-]
gi|257760781|dbj|BAI32278.1| adenine DNA glycosylase MutY [Escherichia coli O103:H2 str. 12009]
gi|291322384|gb|EFE61813.1| adenine DNA glycosylase [Escherichia coli B088]
gi|300522709|gb|EFK43778.1| A/G-specific adenine glycosylase [Escherichia coli MS 119-7]
gi|323162592|gb|EFZ48439.1| A/G-specific adenine glycosylase [Escherichia coli E128010]
gi|323173814|gb|EFZ59443.1| A/G-specific adenine glycosylase [Escherichia coli LT-68]
gi|331063376|gb|EGI35289.1| A/G-specific adenine glycosylase [Escherichia coli TA271]
Length = 350
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|325982700|ref|YP_004295102.1| A/G-specific adenine glycosylase [Nitrosomonas sp. AL212]
gi|325532219|gb|ADZ26940.1| A/G-specific adenine glycosylase [Nitrosomonas sp. AL212]
Length = 357
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 11/207 (5%)
Query: 31 LFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
++ ++ + + + ++ ++ Q+ V + T +
Sbjct: 10 IWHGQYGRHHLPWQKSRDPYAIWLSEIMLQQTQVNTVIPYYVRFMQEFPTIDSLAQASLD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + +G Y ++ N+ + +++ + + P T E + LPGIGR A I +F
Sbjct: 70 TVLSLWSGLGYYS-RARNLHITARKVMHYYQGQFPCTRETIQNLPGIGRSTAAAIAVFSF 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQYNAH--------YWLVL 200
G +D ++ RI R G K + L + + H L+
Sbjct: 129 GQREAILDGNVKRIFARYYGISGYPGENKTQNLLWKKAEESLPVHYHNGKIETYTQALMD 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC + P C+ C + + C +K+
Sbjct: 189 LGATVCTRQAPLCKICPLQSECVALKE 215
>gi|194431805|ref|ZP_03064096.1| A/G-specific adenine glycosylase [Shigella dysenteriae 1012]
gi|194420161|gb|EDX36239.1| A/G-specific adenine glycosylase [Shigella dysenteriae 1012]
Length = 360
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 38 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANALLDEVLHLWTGLGYYA-RA 96
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 97 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 156
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 157 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 216
Query: 221 LC 222
C
Sbjct: 217 GC 218
>gi|183985057|ref|YP_001853348.1| adenine glycosylase MutY [Mycobacterium marinum M]
gi|183178383|gb|ACC43493.1| adenine glycosylase MutY [Mycobacterium marinum M]
Length = 294
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V T
Sbjct: 12 LVAWYERCCRDLPWRAPDVSPWQILVSEFMLQQTPVSRVLSIWPDWVRRWPTASATATAT 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G ++++ + + ++ + D+ +P ++ L LPG+G A +
Sbjct: 72 AADVLRAWGKLGY-PRRAKRLHECAMVVAGDHDDVVPDDVDTLLTLPGVGSYTARAVACF 130
Query: 148 AFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVEQSLL--RIIPPKHQY-NAHYWLVLHG 202
A+ VDT++ R+ R G A +P+ ++P L+ G
Sbjct: 131 AYRQRVPVVDTNVRRVVARAVHGRAEAGSPSATRDHAEVSALLPDDELAPRFSVALMELG 190
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
VC AR P+C C ++ C +
Sbjct: 191 ATVCTARAPRCGQCPLAE-CAWRR 213
>gi|110643110|ref|YP_670840.1| adenine DNA glycosylase [Escherichia coli 536]
gi|191171863|ref|ZP_03033409.1| A/G-specific adenine glycosylase [Escherichia coli F11]
gi|218691085|ref|YP_002399297.1| adenine DNA glycosylase [Escherichia coli ED1a]
gi|300995457|ref|ZP_07181105.1| A/G-specific adenine glycosylase [Escherichia coli MS 200-1]
gi|306812134|ref|ZP_07446332.1| adenine DNA glycosylase [Escherichia coli NC101]
gi|110344702|gb|ABG70939.1| A/G-specific adenine glycosylase [Escherichia coli 536]
gi|190907898|gb|EDV67491.1| A/G-specific adenine glycosylase [Escherichia coli F11]
gi|218428649|emb|CAR09578.2| adenine DNA glycosylase [Escherichia coli ED1a]
gi|300304819|gb|EFJ59339.1| A/G-specific adenine glycosylase [Escherichia coli MS 200-1]
gi|305854172|gb|EFM54610.1| adenine DNA glycosylase [Escherichia coli NC101]
gi|324011811|gb|EGB81030.1| A/G-specific adenine glycosylase [Escherichia coli MS 60-1]
Length = 350
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|320656651|gb|EFX24547.1| adenine DNA glycosylase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 350
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTALANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|265762947|ref|ZP_06091515.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_16]
gi|263255555|gb|EEZ26901.1| A/G-specific adenine glycosylase [Bacteroides sp. 2_1_16]
Length = 348
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ K EL + + + + ++ ++ Q+ V +
Sbjct: 3 RNFSNAIENWYKEYKRELPWRDSADPYVIWISEIILQQTRVVQGYDYFVRFMKRFPDVAT 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 63 LAEADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGEYTAA 117
Query: 143 VILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S A+ +P VD +++R+ +R + + ++ K+ +
Sbjct: 118 AICSFAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKMFAAVADELLDRKNPALYNQA 177
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 178 IMDFGAIQCSPQTPNCMFCPLADSCAALAK 207
>gi|239638129|ref|ZP_04679088.1| A/G-specific adenine glycosylase [Staphylococcus warneri L37603]
gi|239596412|gb|EEQ78950.1| A/G-specific adenine glycosylase [Staphylococcus warneri L37603]
Length = 347
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 78/210 (37%), Gaps = 9/210 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K + + F P + N + + ++ ++ Q+ V + T
Sbjct: 8 KKNIMQWFNQNQRSMPWRET----TNPYYIWLSEVMLQQTQVKTVIDYYDRFIQRFPTIA 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ Y +G Y ++ N + +E+ +P E L G+G
Sbjct: 64 DLSEAHEDEVLKYWEGLGYYS-RARNFHHAIKEVQHEYQGIVPSDPENFKALKGVGPYTQ 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSL-LRIIP--PKHQYNAHYW 197
++S+AF P VD ++FR+ +R+ + ++ ++P + +
Sbjct: 123 AAVMSIAFDHPLPTVDGNVFRVWSRLNNDSRDIKLQSTRKAYEQELLPYVREEAGTFNQS 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C + P C C + C+ +
Sbjct: 183 MMELGALICTPKNPLCMFCPVQENCEAYDK 212
>gi|59801130|ref|YP_207842.1| putative adenine glycosylase [Neisseria gonorrhoeae FA 1090]
gi|254493828|ref|ZP_05106999.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae 1291]
gi|268594889|ref|ZP_06129056.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae 35/02]
gi|268682260|ref|ZP_06149122.1| MutY [Neisseria gonorrhoeae PID332]
gi|268684413|ref|ZP_06151275.1| MutY [Neisseria gonorrhoeae SK-92-679]
gi|293398994|ref|ZP_06643159.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae F62]
gi|59718025|gb|AAW89430.1| putative adenine glycosylase [Neisseria gonorrhoeae FA 1090]
gi|226512868|gb|EEH62213.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae 1291]
gi|268548278|gb|EEZ43696.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae 35/02]
gi|268622544|gb|EEZ54944.1| MutY [Neisseria gonorrhoeae PID332]
gi|268624697|gb|EEZ57097.1| MutY [Neisseria gonorrhoeae SK-92-679]
gi|291610408|gb|EFF39518.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae F62]
Length = 349
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 88/219 (40%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKH 190
+GR A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 VGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSEN 179
Query: 191 QYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 ADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 218
>gi|329770485|ref|ZP_08261863.1| endonuclease III [Gemella sanguinis M325]
gi|328836234|gb|EGF85903.1| endonuclease III [Gemella sanguinis M325]
Length = 211
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 111/182 (60%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+++ I +P+ EL + N+ LI+AVLLSAQ D VN+ATK LFE T
Sbjct: 9 KVKLITQYLDKNFPNVDCELNFSNNLELIIAVLLSAQCKDEYVNRATKKLFEKYKTIDDY 68
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ I+T+G+Y+ KS+NI+ ++++L + +D KIP T E L +LPG+GRK ANV
Sbjct: 69 ADAKVEDIEKLIKTLGLYKAKSKNIVGMANMLRDVYDYKIPTTREELIKLPGVGRKTANV 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+LS+ F IP I VDTH+ R++ GLA P +VE+ L+ + P K H+ L+ G
Sbjct: 129 VLSVGFNIPAIAVDTHVERVAKMFGLADKNDNPLQVEKKLMELFPMKDWGKIHHQLIHLG 188
Query: 203 RY 204
RY
Sbjct: 189 RY 190
>gi|331659096|ref|ZP_08360038.1| A/G-specific adenine glycosylase [Escherichia coli TA206]
gi|315295629|gb|EFU54952.1| A/G-specific adenine glycosylase [Escherichia coli MS 16-3]
gi|331053678|gb|EGI25707.1| A/G-specific adenine glycosylase [Escherichia coli TA206]
Length = 350
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEIAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|160914479|ref|ZP_02076694.1| hypothetical protein EUBDOL_00484 [Eubacterium dolichum DSM 3991]
gi|158433637|gb|EDP11926.1| hypothetical protein EUBDOL_00484 [Eubacterium dolichum DSM 3991]
Length = 348
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 81/217 (37%), Gaps = 10/217 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + E++ + L + + + V+ ++ Q+ V +
Sbjct: 1 MNIQHDKEQLTKQLLDWYKQNARVLPWREKATPYRVWVSEIMLQQTRVEAVKPYFERFIA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ ++ L +G YR + N+ + + + + K+P T L LPG
Sbjct: 61 TIPDIPTLANTEDEVLAKLWEGLGYYR-RVYNMKKCAQVCVEKHGGKLPNTYAELLELPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG VD ++ R+ +R+ + + + + IP
Sbjct: 120 IGAYTAGAIASIAFGECVAAVDGNVLRVFSRVLVLEEDILKESVKRQYAKIVQMYIPKHE 179
Query: 191 QYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
+ L+ G +C P+C C I++ CK +
Sbjct: 180 SSAFNQALMELGATICVPNAAPRCNICPIADNCKGYQ 216
>gi|15603184|ref|NP_246257.1| MutY [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721682|gb|AAK03403.1| MutY [Pasteurella multocida subsp. multocida str. Pm70]
Length = 378
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 34 KTLYGVWLSEVMLQQTQVATVIPYFQRFVDKFPNICALANAPLDEVLHLWTGLGYYA-RA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P E + L G+G+ A +LS P +D ++ R+ +
Sbjct: 93 RNLHKAAQTIRDQYAGEFPTDFEQVWALTGVGKSTAGAVLSSCLDAPYPILDGNVKRVLS 152
Query: 166 RIGLAPGK-TPNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE+ L + + P + N + ++ G VC KP+C C + +
Sbjct: 153 RYFAVSGWAGEKKVEEQLWQYSAQVTPTEQVANFNQAMMDLGAMVCTRTKPKCDLCPLRH 212
Query: 221 LCKRI 225
C+
Sbjct: 213 HCQAY 217
>gi|289705695|ref|ZP_06502079.1| putative A/G-specific adenine glycosylase [Micrococcus luteus SK58]
gi|289557535|gb|EFD50842.1| putative A/G-specific adenine glycosylase [Micrococcus luteus SK58]
Length = 310
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNK 68
P + ++ + + +L + + + ++V+ ++ Q+ V V
Sbjct: 2 PVPAPLVPPTVDVPRLHDAVLGWFAVHARDLPWRSPDCSPWGVLVSEIMLQQTPVVRVLP 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ E TP + A + +G R+ + + ++ D ++P
Sbjct: 62 RWREWLERWPTPADLAAAPTADVLTAWDRLGYPRRALR-LQEAARAVVQRHDGRVPADPA 120
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVE-QSLLR 184
L LPGIG A + S AFG+P VDT++ R+ R PG++ + E +
Sbjct: 121 ALRALPGIGEYTAAAVASFAFGLPETVVDTNVRRVIARAVAGEALPGRSLTRAEMRRAQA 180
Query: 185 IIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++P + ++ G VC AR P C C ++ +C
Sbjct: 181 LMPADPARANAWNAAVMELGALVCTARSPACDRCPLAEMC 220
>gi|293416222|ref|ZP_06658862.1| A/G-specific adenine glycosylase [Escherichia coli B185]
gi|291432411|gb|EFF05393.1| A/G-specific adenine glycosylase [Escherichia coli B185]
Length = 350
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPDIGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|331648717|ref|ZP_08349805.1| A/G-specific adenine glycosylase [Escherichia coli M605]
gi|331042464|gb|EGI14606.1| A/G-specific adenine glycosylase [Escherichia coli M605]
Length = 355
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 33 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T+E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 92 RNLHKAAQQVAALHGGKFPETVEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 152 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 211
Query: 221 LC 222
C
Sbjct: 212 GC 213
>gi|153808082|ref|ZP_01960750.1| hypothetical protein BACCAC_02368 [Bacteroides caccae ATCC 43185]
gi|149128985|gb|EDM20201.1| hypothetical protein BACCAC_02368 [Bacteroides caccae ATCC 43185]
Length = 352
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ + Q +
Sbjct: 8 KAIIDWYKENKRELPWRESSDPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQSLADA 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + + +G Y + + + P+T + L G+G A I S
Sbjct: 68 DEDEVMKFWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGEYTAAAICS 122
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R ++ K + ++
Sbjct: 123 FAYGMPYAVVDGNVYRVLSRYFGVDTPIDSTEGKKLFAALADEMLDRKQPALYNQGIMDF 182
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C ++ C +
Sbjct: 183 GAIQCTPQSPDCLFCPLAESCSAL 206
>gi|300925038|ref|ZP_07140957.1| A/G-specific adenine glycosylase [Escherichia coli MS 182-1]
gi|300937422|ref|ZP_07152250.1| A/G-specific adenine glycosylase [Escherichia coli MS 21-1]
gi|300418812|gb|EFK02123.1| A/G-specific adenine glycosylase [Escherichia coli MS 182-1]
gi|300457524|gb|EFK21017.1| A/G-specific adenine glycosylase [Escherichia coli MS 21-1]
Length = 350
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPALGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|268596733|ref|ZP_06130900.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae FA19]
gi|268599107|ref|ZP_06133274.1| MutY [Neisseria gonorrhoeae MS11]
gi|268603792|ref|ZP_06137959.1| MutY [Neisseria gonorrhoeae PID1]
gi|268686727|ref|ZP_06153589.1| MutY [Neisseria gonorrhoeae SK-93-1035]
gi|268550521|gb|EEZ45540.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae FA19]
gi|268583238|gb|EEZ47914.1| MutY [Neisseria gonorrhoeae MS11]
gi|268587923|gb|EEZ52599.1| MutY [Neisseria gonorrhoeae PID1]
gi|268627011|gb|EEZ59411.1| MutY [Neisseria gonorrhoeae SK-93-1035]
Length = 349
Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 88/219 (40%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKH 190
+GR A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 VGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSEN 179
Query: 191 QYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 ADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 218
>gi|226532964|ref|NP_001150481.1| A/G-specific adenine DNA glycosylase [Zea mays]
gi|195639554|gb|ACG39245.1| A/G-specific adenine DNA glycosylase [Zea mays]
Length = 469
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 16/207 (7%)
Query: 32 FSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + + V+ ++ Q+ V + T + +
Sbjct: 62 LLRWYDAHRRDLPWRCVSGSEEERAYAVWVSEVMLQQTRVPVVVAYYERWMARWPTVRSL 121
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++++ +G YR+ + I+ L + GIG A
Sbjct: 122 AAATQEEVNEMWAGLGYYRRARFLLEGAKQIIEKGLFPCTALA---LREVRGIGDYTAGA 178
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
I S+AF VD ++ R+ +R+ + + +++ P + + +
Sbjct: 179 IASIAFNEVVPVVDGNVIRVISRLYTIADNPKESSTVKRFWDLVGQMVDPLRPGDFNQAM 238
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C KP C C +S+ C+ +
Sbjct: 239 MELGATLCSKTKPGCSQCPVSSHCQAL 265
>gi|163803808|ref|ZP_02197660.1| hypothetical protein 1103602000429_AND4_13598 [Vibrio sp. AND4]
gi|159172388|gb|EDP57262.1| hypothetical protein AND4_13598 [Vibrio sp. AND4]
Length = 358
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T ++ +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVELANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + N++ + P L + LPGIGR A +LS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKEVANKYSGQFPLDLAQMNALPGIGRSTAAAVLSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVDGWPGQKKVENQLWEIAETHTPQADVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C +S +C KQ
Sbjct: 189 ICTRSKPKCTLCPVSEICVAKKQ 211
>gi|330908995|gb|EGH37509.1| A/G-specific adenine glycosylase [Escherichia coli AA86]
Length = 350
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T+E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETVEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|254293431|ref|YP_003059454.1| HhH-GPD family protein [Hirschia baltica ATCC 49814]
gi|254041962|gb|ACT58757.1| HhH-GPD family protein [Hirschia baltica ATCC 49814]
Length = 361
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 24/226 (10%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKA 69
+ E + + L + + + + ++ ++ Q+T +
Sbjct: 10 KSDFENAAHELLQWYDQMARRLPWRLSPQARKNGDMPDPYRVWLSEIMLQQTTVPHAAPY 69
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ + + A + +G Y + + + P T+E
Sbjct: 70 FDKFTRLWPKVEDLAAAHNDDVMREWAGLGYYARARNLH---KCAKVLAGLDAFPNTIEA 126
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA--------PGKTPNKVEQS 181
L LPG+G A + S+AF +P VD +I R+ +R+ + ++ Q
Sbjct: 127 LLALPGVGPYTAAAVGSIAFDLPVAPVDGNIERVISRLMAIAGDGSAAGWAQDKKEITQR 186
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++P + ++ G VC + P C C ++C ++
Sbjct: 187 VQTLVPQ-RSGDFAQAMMDLGASVCTPKSPNCMICPWMDICLARQE 231
>gi|90580275|ref|ZP_01236082.1| A/G-specific adenine DNA glycosylase [Vibrio angustum S14]
gi|90438577|gb|EAS63761.1| A/G-specific adenine DNA glycosylase [Vibrio angustum S14]
Length = 354
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E T Q + A + ++ + +G Y ++
Sbjct: 27 KTPYKVWLSEIMLQQTQVATVIPYFERFMERFPTVQDLAAAEQDEVLHLWTGLGYYA-RA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E + P ++ + LPGIGR A +LS++ +D ++ R
Sbjct: 86 RNLHKAAQLIVSEHNGIFPTNIDQVQALPGIGRSTAGAVLSLSLAQHHPILDGNVKRTLA 145
Query: 166 RIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K Q P + ++ G +C KP+C+ C +S
Sbjct: 146 RCYAIEGWPGKKTVENKLWQIAETNTPEMGVERYNQAMMDMGAMICTRSKPKCELCPVST 205
Query: 221 LCKRIKQ 227
C +K+
Sbjct: 206 QCIALKE 212
>gi|325696533|gb|EGD38423.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK160]
gi|327460324|gb|EGF06661.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1057]
gi|327462180|gb|EGF08507.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1]
Length = 386
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEANKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + G+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKSAQQIMTDFAGKFPDSYGGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|288918325|ref|ZP_06412678.1| HhH-GPD family protein [Frankia sp. EUN1f]
gi|288350220|gb|EFC84444.1| HhH-GPD family protein [Frankia sp. EUN1f]
Length = 319
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + EL + + ++V+ ++ Q+ V + TP + A
Sbjct: 40 DWFGAHARELPWRRPEAGPWGVLVSEIMLQQTPVHRVLPVWETWLRRWPTPASLAAEPSG 99
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + ++ +P L+ L LPG+G A + + AF
Sbjct: 100 EAVREWGRLGYPRRALRLHQAAG-AIVERHGGAVPDQLDDLLALPGVGSYTARAVAAFAF 158
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII------PPKHQYNAHYWLVLHGR 203
+D ++ R R P V + L ++ P+ A + G
Sbjct: 159 RQRHAVIDVNVRRFVARAVEGTAAGPTAVSRRDLELVADLLPADPETAARASAAFMELGA 218
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C +C + C
Sbjct: 219 LVCVARAPRCPACPVQEHC 237
>gi|149277325|ref|ZP_01883467.1| putative A/G-specific adenine glycosylase [Pedobacter sp. BAL39]
gi|149232202|gb|EDM37579.1| putative A/G-specific adenine glycosylase [Pedobacter sp. BAL39]
Length = 350
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 9/202 (4%)
Query: 34 LKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ K L + N + + ++ ++ Q+ E +
Sbjct: 9 KWYELNKRSLPWRNTRDPYVIWLSEIILQQTRVEQGLPYFNRFLSQYPGITDFANAEETQ 68
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y + N++ + + + + P T + L L GIG A I S +
Sbjct: 69 ILKLWQGLGYYS-RGRNMLYTARQIRDNHNGVFPNTYDTLVGLKGIGEYTAAAISSFSSD 127
Query: 151 IPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+D ++FR+ +R + + +I + + ++ G
Sbjct: 128 ESKAVLDGNVFRVLSRYFGVDSPINSTEGKKIFSALAQSLIAGQTPSIYNQAIMEFGALQ 187
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
CK + P C SC + C+ +
Sbjct: 188 CKPKSPDCPSCPVHAGCEAKTK 209
>gi|89898423|ref|YP_515533.1| adenine/guanine glycosylase [Chlamydophila felis Fe/C-56]
gi|89331795|dbj|BAE81388.1| adenine/guanine glycosylase [Chlamydophila felis Fe/C-56]
Length = 369
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + K + + + + V+ ++ Q+ V K +
Sbjct: 8 ERAKKFPVEKLKQWFIDNKRSFPWRDDPSPYNVWVSEVMLQQTRAEVVVKYFLEWMKRFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E+++ +G Y + N++ + +++ +F K+P L ++ G+G
Sbjct: 68 TIESLATANEEEVIKAWEGLGYYT-RVRNLLLGARMVMKDFGGKLPDDPLDLMQIKGLGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYN 193
+ IL+ AF T VD ++ R+ +R+ L T + + L I+P K
Sbjct: 127 YTVHAILAFAFKRRTAAVDGNVLRVISRVFLIDASIDLESTKTWIFRITLSILPVKDPQV 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK R P+C+ C ++++C K+
Sbjct: 187 VAEALIELGACVCK-RSPKCEICPLNSVCGAFKE 219
>gi|149912476|ref|ZP_01901010.1| A/G-specific adenine glycosylase [Roseobacter sp. AzwK-3b]
gi|149812882|gb|EDM72708.1| A/G-specific adenine glycosylase [Roseobacter sp. AzwK-3b]
Length = 352
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 82/210 (39%), Gaps = 16/210 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +L + + + + ++ ++ Q+T V + + T
Sbjct: 10 LLAWYDAHARDLPWRVAPAARLAGTRPDPYRVWLSEVMLQQTTVAAVRAYFERFTALWPT 69
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A + ++ +G Y ++ N++ + ++ + + P+T E L LPGIG
Sbjct: 70 VEALAAAPDAQVMGEWAGLGYYA-RARNLLKCARVVAEDHGGRFPETREALMALPGIGPY 128
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
I ++AF P + VD ++ R+ R+ P ++ ++ + P +
Sbjct: 129 TGAAIAAIAFDAPEVVVDGNVERVMARVHDIRTPLPAAKPELVRAAAALTPKRRPGCHAQ 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G VC R P C C C K
Sbjct: 189 AVMDLGATVCTPRAPACGICPWWGACAARK 218
>gi|331684592|ref|ZP_08385184.1| A/G-specific adenine glycosylase [Escherichia coli H299]
gi|331078207|gb|EGI49413.1| A/G-specific adenine glycosylase [Escherichia coli H299]
Length = 350
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPALGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|260440408|ref|ZP_05794224.1| putative adenine glycosylase [Neisseria gonorrhoeae DGI2]
gi|268601458|ref|ZP_06135625.1| MutY [Neisseria gonorrhoeae PID18]
gi|291043702|ref|ZP_06569418.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae DGI2]
gi|268585589|gb|EEZ50265.1| MutY [Neisseria gonorrhoeae PID18]
gi|291012165|gb|EFE04154.1| A/G-specific adenine glycosylase [Neisseria gonorrhoeae DGI2]
Length = 349
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 88/219 (40%), Gaps = 8/219 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLE 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G
Sbjct: 61 KFPTVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKH 190
+GR A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 LGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSEN 179
Query: 191 QYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 ADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 218
>gi|68249355|ref|YP_248467.1| A/G-specific adenine glycosylase [Haemophilus influenzae 86-028NP]
gi|68057554|gb|AAX87807.1| A/G-specific adenine glycosylase [Haemophilus influenzae 86-028NP]
Length = 378
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTMRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|332360856|gb|EGJ38662.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK49]
Length = 386
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPGR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|156346216|ref|XP_001621476.1| hypothetical protein NEMVEDRAFT_v1g144756 [Nematostella vectensis]
gi|156207449|gb|EDO29376.1| predicted protein [Nematostella vectensis]
Length = 210
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 9/193 (4%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + V+ ++ Q+ V T + A E ++ +
Sbjct: 19 RKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMTALPTVNDLAAAPEDEVLHLWT 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E + P+ ++ LT LPGIGR A I S++ G+ +
Sbjct: 79 GLGYYT-RARNLQKTAQIVMREHAGEFPRDVDQLTELPGIGRSTAGAIASLSMGLRAPIL 137
Query: 157 DTHIFRISNRIGLAPGKTPN-KVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G KV + L R P + ++ G +C KP
Sbjct: 138 DGNVKRVLARYVAQEGYPGEPKVAKQLWDVAERFTPQARVNHYTQAMMDLGATLCTRSKP 197
Query: 212 QCQSCIISNLCKR 224
C C + + C+
Sbjct: 198 SCLLCPLKSGCQA 210
>gi|260902384|ref|ZP_05910779.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus AQ4037]
gi|308107147|gb|EFO44687.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus AQ4037]
Length = 308
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+++ ++ ++ Q+ V + E T + + ++ + +G Y ++
Sbjct: 26 KTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVDLANAEQDEVLHLWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P LE + LPGIGR A +LS P +D ++ R +
Sbjct: 85 RNLHKAAKEVAHKYSGEFPLNLEQMNALPGIGRSTAAAVLSSVHKQPHAILDGNVKRTLS 144
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE L I P + ++ G VC KP+C C +++
Sbjct: 145 RCFAVEGWPGQKKVENQLWEIAEAHTPQTDVDKYNQAMMDMGAMVCTRSKPKCTLCPVAD 204
Query: 221 LCKRIKQ 227
LC KQ
Sbjct: 205 LCVAKKQ 211
>gi|108759213|ref|YP_634549.1| base excision DNA repair protein [Myxococcus xanthus DK 1622]
gi|108463093|gb|ABF88278.1| base excision DNA repair protein, HhH-GPD family [Myxococcus
xanthus DK 1622]
Length = 240
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 10/232 (4%)
Query: 2 VSSKKSDSYQG---NSPLGCLYTPKELEEIFYLFSLKWPS-------PKGELYYVNHFTL 51
+ S+++ + G P P +++E+ + F
Sbjct: 1 MPSRQAPTKPGRVVEPPPRPDKKPFDIDEVLGRIREAVRHFADAAMFALAARGHDTLFEQ 60
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+VA +LS ++ D + L + A TP+ + + + + I+ + + K+ + ++
Sbjct: 61 LVACILSIRTRDEVSLPVSLALLQRASTPEALARMSPEDIDALIQPVTFHEAKAWQLHAI 120
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
+ +EF +P + L G+G K A++ L +A G I VD H+ R++NR G
Sbjct: 121 ATRTRDEFGGALPCDAQVLQSFKGVGPKCAHLALGIACGHEAISVDIHVHRVTNRWGYVQ 180
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+TP ++L ++P + LV G++VC +P+C +C + + C+
Sbjct: 181 ARTPEATMEALEAVLPRAWWVELNRLLVPFGKHVCTGTRPKCSTCPVLSFCR 232
>gi|309751580|gb|ADO81564.1| A/G-specific adenine glycosylase [Haemophilus influenzae R2866]
Length = 378
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P + + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFDQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWTLTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|313681901|ref|YP_004059639.1| a/g-specific DNA-adenine glycosylase [Sulfuricurvum kujiense DSM
16994]
gi|313154761|gb|ADR33439.1| A/G-specific DNA-adenine glycosylase [Sulfuricurvum kujiense DSM
16994]
Length = 316
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 10/197 (5%)
Query: 32 FSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNV-NKATKHLFEIADTPQKMLAI 86
+ + + +L + N + + V+ ++ Q+ V + E T +
Sbjct: 9 LLQWYNKNGRHDLPWRTTDNPYHIYVSEIMLQQTQVKTVLERFYFPFLERFPTLLDIAES 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y + H + + +P L L GIGR A+ I +
Sbjct: 69 DLDDVLKMWEGLGYYTRA-----KNLHHAARQCNGILPDNAHDLMNLSGIGRSTAHAIAA 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
A+ +D ++ RI +R + K+ + + H + + ++ G VC
Sbjct: 124 FAYRESLPILDANVKRILHRYFALKERNEKKLWEYAYALFDSSHPFEYNQAMMDVGATVC 183
Query: 207 KARKPQCQSCIISNLCK 223
A+KP C+ C C+
Sbjct: 184 LAKKPLCEVCPFKESCQ 200
>gi|284040814|ref|YP_003390744.1| A/G-specific adenine glycosylase [Spirosoma linguale DSM 74]
gi|283820107|gb|ADB41945.1| A/G-specific adenine glycosylase [Spirosoma linguale DSM 74]
Length = 362
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + + + + ++ ++ Q+ + + T M E
Sbjct: 18 LEQWYSVHKRDLPWRHTLDPYYIWLSEIILQQTRVAQGKPYYERFVDAYPTISDMANADE 77
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+KL + +G Y ++ N+ + + + D K P T L ++ GIG A + S A
Sbjct: 78 RKLLRLWQGLGYYS-RARNLHQTARYVTEKLDGKFPNTYHDLLKMKGIGAYTAAAVASFA 136
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK------HQYNAHYWLVLHG 202
FG VD +++R+ R+ + + + + ++ G
Sbjct: 137 FGERVPVVDGNVYRVLARVFGITEDITTTTAKKTFAALATRLMQAAVDPATYNQAIMEFG 196
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
C P C C + C
Sbjct: 197 AIHCTPVAPDCLLCPVQQQCVAY 219
>gi|261392333|emb|CAX49864.1| A/G-specific adenine glycosylase [Neisseria meningitidis 8013]
Length = 346
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + +F +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRAKPLCRQCPMADICEAKKQ 215
>gi|194436798|ref|ZP_03068898.1| A/G-specific adenine glycosylase [Escherichia coli 101-1]
gi|194424280|gb|EDX40267.1| A/G-specific adenine glycosylase [Escherichia coli 101-1]
Length = 350
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVAALHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSHCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|253572373|ref|ZP_04849776.1| A/G-specific adenine glycosylase [Bacteroides sp. 1_1_6]
gi|251838148|gb|EES66236.1| A/G-specific adenine glycosylase [Bacteroides sp. 1_1_6]
Length = 257
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ + + +
Sbjct: 15 EAIVEWYKEYKRDLPWRESSDPYRIWISEIILQQTRVAQGYDYFLRFIKRFPDVKALADA 74
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 75 DEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPETYPEVLALKGVGEYTAAAICS 129
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+G+P VD +++R+ +R + + ++ K + ++
Sbjct: 130 FAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKQPALYNQGIMDF 189
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C +++ C +
Sbjct: 190 GAIQCTPQSPDCLFCPLADSCSAL 213
>gi|218710638|ref|YP_002418259.1| A/G-specific adenine glycosylase [Vibrio splendidus LGP32]
gi|218323657|emb|CAV19958.1| A/G-specific adenine glycosylase [Vibrio splendidus LGP32]
Length = 352
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + EL + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 KWYDAYGRKELPWQQNKTAYSVWLSEIMLQQTQVATVIPYYQRFLERFPTVVDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+ ++ ++ P ++E + LPGIGR A +LS
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKIVAEQYGSEFPLSIEEMNALPGIGRSTAAAVLSSVH 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
+P +D ++ R R G KVE L P + + ++ G
Sbjct: 129 KLPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWEHAEAHTPNQDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC KP+C C I ++C+ K
Sbjct: 189 VCTRSKPKCTLCPIESMCEAKK 210
>gi|298369112|ref|ZP_06980430.1| A/G-specific adenine glycosylase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298283115|gb|EFI24602.1| A/G-specific adenine glycosylase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 349
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTSSSFAERLIRWQRQHGRHDLPWQVQNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAALQDEVLSLWAGLGYYS-RARNLHKAAQQVVGQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQ 191
A I + AF +D ++ R+ R+ G +K + ++P +
Sbjct: 120 STAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|319938963|ref|ZP_08013327.1| A/G-specific adenine glycosylase [Streptococcus anginosus 1_2_62CV]
gi|319812013|gb|EFW08279.1| A/G-specific adenine glycosylase [Streptococcus anginosus 1_2_62CV]
Length = 389
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + ++ ++ Q+ V +
Sbjct: 11 MWEDEKITSFRQKLLTWYDENKRDLPWRRSNNPYHIWISEIMLQQTRVDTVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + ++ E++L +G Y + N+ + ++ +F + P T E ++ L G
Sbjct: 71 WFPTIKDLVMASEERLLKAWEGLGYYS-RVRNMQQAAQQIMTDFSGEFPHTYEEISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+P VD ++ R+ +R+ KV Q+++ +I P+
Sbjct: 130 IGPYTAGAIASIAFGLPEPAVDGNVMRVLSRLFEVNLDIGVPANRKVFQAMMEILIDPQR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ +
Sbjct: 190 PGDFNQALMDLGSDIEAPINPRPDDSPVREF 220
>gi|319775301|ref|YP_004137789.1| adenine DNA glycosylase [Haemophilus influenzae F3047]
gi|317449892|emb|CBY86104.1| adenine DNA glycosylase [Haemophilus influenzae F3047]
Length = 378
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWTLTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|319637753|ref|ZP_07992519.1| adenine glycosylase [Neisseria mucosa C102]
gi|317400908|gb|EFV81563.1| adenine glycosylase [Neisseria mucosa C102]
Length = 344
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 11/208 (5%)
Query: 30 YLFSLK---WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +++ ++ ++ Q+ V T Q + A
Sbjct: 9 RRLIDWQRLHGRHNLPWQVKDPYSVWLSEIMLQQTQVATVLDYYPRFLAKFPTVQSLAAA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ + +G Y ++ N+ + +I +F P + L L G+GR A I +
Sbjct: 69 PQDEVLSLWAGLGYYS-RARNLHKAAQQVIGQFGGIFPSERKDLESLCGVGRSTAAAISA 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQYNAHYWLV 199
AF +D ++ R+ R+ G +K + ++P + L+
Sbjct: 128 FAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLM 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VCK KP C C ++++C+ KQ
Sbjct: 188 DLGATVCKRTKPLCHQCPMADICEAKKQ 215
>gi|146284409|ref|YP_001174562.1| A / G specific adenine glycosylase [Pseudomonas stutzeri A1501]
gi|145572614|gb|ABP81720.1| A / G specific adenine glycosylase [Pseudomonas stutzeri A1501]
Length = 355
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 86/214 (40%), Gaps = 13/214 (6%)
Query: 20 YTPKEL-EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+P++ + F + +L + + + V+ ++ Q+ V +
Sbjct: 1 MSPEQFGAAVLDWFDRH---GRKDLPWQQDITPYRVWVSEIMLQQTQVSTVLGYFDRFMD 57
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + E ++ + +G Y ++ N+ + +++ E+D P ++ L LPG
Sbjct: 58 ALPSVEALAKAEEDEVLHLWTGLGYYS-RARNLHKTAKVIVAEYDGIFPADVDKLAELPG 116
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKH 190
IGR A I S++ G+ +D ++ R+ R G ++ + R P +
Sbjct: 117 IGRSTAGAIASISLGLRAPILDGNVKRVLARYVAQDGYPGEPKVARQLWEVAERFTPQQR 176
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C +P C C + + C+
Sbjct: 177 VNHYTQAMMDLGATLCTRSRPSCLLCPLKDGCRA 210
>gi|227892515|ref|ZP_04010320.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus ultunensis
DSM 16047]
gi|227865636|gb|EEJ73057.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus ultunensis
DSM 16047]
Length = 209
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + KE + +P+ K EL + + F L+ AV++SAQ+TD VN+ +
Sbjct: 4 KLLSDKEARNVLQKILTLYPNAKSELKWDSKFHLLCAVMMSAQTTDKMVNRVMPKFSQEF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ + ++++N I+TIG+YR K++++ + + IL+++++++IP+ + L LPG+G
Sbjct: 64 PYPKDLANAPIEQIENEIKTIGLYRSKAKHLKATAKILVDKYNSQIPKDKKILMTLPGVG 123
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K ANV+L+ +G+P I VDTH+ RIS + + K TP++VE+ L I+P + H+
Sbjct: 124 EKTANVVLAEGYGVPAIAVDTHVSRISKKFHIVDQKATPHEVEKRLEAILPKEEWIKTHH 183
Query: 197 WLVLHGRYVCKAR 209
++ GRY +R
Sbjct: 184 AMIWFGRYTMPSR 196
>gi|148826597|ref|YP_001291350.1| hypothetical protein CGSHiEE_08300 [Haemophilus influenzae PittEE]
gi|148716757|gb|ABQ98967.1| hypothetical protein CGSHiEE_08300 [Haemophilus influenzae PittEE]
Length = 378
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P H + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTTHVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|282878189|ref|ZP_06286985.1| A/G-specific adenine glycosylase [Prevotella buccalis ATCC 35310]
gi|281299607|gb|EFA91980.1| A/G-specific adenine glycosylase [Prevotella buccalis ATCC 35310]
Length = 369
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 73/203 (35%), Gaps = 11/203 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + + + + ++ ++ Q+ + + + A E
Sbjct: 42 LLRWFSENGRSMPWRETTDPYAIWISEVILQQTRIQQGWAYWERFMARFPKVEDLAAASE 101
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ P T+EGL L G+G A I S+A
Sbjct: 102 DEVLRLWQGLGYYSRARNLHHAAKQVVELGHF---PNTMEGLKALKGVGDYTAAAIGSIA 158
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VD +++R+ R + ++P + ++ G
Sbjct: 159 FGLPVAVVDGNVYRVLARHYGIYTPINTTEGKKEFAALAQSLLPATEPSAYNQAIMDFGA 218
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
C P+C C +++ C ++
Sbjct: 219 IQCTPTSPRCLICPLTDSCMALR 241
>gi|194365323|ref|YP_002027933.1| A/G-specific adenine glycosylase [Stenotrophomonas maltophilia
R551-3]
gi|194348127|gb|ACF51250.1| A/G-specific adenine glycosylase [Stenotrophomonas maltophilia
R551-3]
Length = 374
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 12/227 (5%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNK 68
P T +E + +L + +L + + + + ++ ++ Q+ V
Sbjct: 2 PRQPHASAKTAQEDGFVAHLLHWFDDHGRHDLPWQHPRSPYRVWLSEIMLQQTQVSTVIP 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ + T + A + +G Y ++ N+ + + + D ++P+ +
Sbjct: 62 YFQRFLQHFPTLPDLAAASNDAVMAQWAGLGYYA-RARNLHAAAKRCVELHDGELPRDFD 120
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI-- 185
L LPGIGR A ILS A+ P +D ++ R+ +R G +E+ L I
Sbjct: 121 ALHALPGIGRSTAGAILSQAWNDPFAILDGNVKRVLSRYHGIEGFPGLPAIEKQLWAIAE 180
Query: 186 -----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + + G VC KP C C + + C ++
Sbjct: 181 THVAQVPAGRMADYTQAQMDLGATVCSRAKPACVICPLQDDCVARRE 227
>gi|303249982|ref|ZP_07336184.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651045|gb|EFL81199.1| A/G-specific adenine glycosylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 335
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
++ ++ Q+ V + E T + ++ + +G Y ++ N+ +
Sbjct: 1 MSEVMLQQTQVATVIPYFERFIERFPTVTDLADAHIDEVLHLWTGLGYYA-RARNLHKAA 59
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
+ ++F+++ P + + L G+GR A ILS P +D ++ R+ +R G
Sbjct: 60 QQIRDQFNDEFPTDFDDVLALSGVGRSTAGAILSSVLNAPHPILDGNVKRVLSRAFAVEG 119
Query: 173 KTPNK-VEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ K VE +L ++ P + + + ++ G VC KP+C C + +LC+ +
Sbjct: 120 WSGEKSVENTLWQLTASVTPNRQVADFNQAMMDLGAMVCTRSKPKCSLCPLVDLCEANR 178
>gi|322434039|ref|YP_004216251.1| HhH-GPD family protein [Acidobacterium sp. MP5ACTX9]
gi|321161766|gb|ADW67471.1| HhH-GPD family protein [Acidobacterium sp. MP5ACTX9]
Length = 376
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 15/207 (7%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + EL + + + V+ ++ Q+ V + ++ T +
Sbjct: 19 RKLTHWYREHARELPWRGVHDPYKTWVSEVMLQQTRVAAVLEHYDRFLKLFPTIIALALA 78
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ +G YR ++ + + ++ E KIP + L +LPG+G I S
Sbjct: 79 PEDEVLAAWSGLGYYR-RARMLHKAAQFVVKELAGKIPGQSDELRKLPGVGEYTCAAIAS 137
Query: 147 MAFGIPTIGVDTHIFRI----SNRIGLAPGKTPNKVEQSLLRIIPPKH-------QYNAH 195
+AFG VD ++ R+ + R A + ++P K + +
Sbjct: 138 IAFGESIAVVDGNVERVLLRVTGRAEEATAAGKAFIRVQAGLLVPHKRVAHHSNAAGDHN 197
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC R P C C + +LC
Sbjct: 198 QGMMELGATVCLPRGPLCLGCPVYDLC 224
>gi|261250155|ref|ZP_05942731.1| A/G-specific adenine glycosylase [Vibrio orientalis CIP 102891]
gi|260939271|gb|EEX95257.1| A/G-specific adenine glycosylase [Vibrio orientalis CIP 102891]
Length = 351
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYENYGRKSLPWQQNKTAYSVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + ++ ++D K P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKVVAKQYDGKFPLNIEEMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRY 204
P +D ++ R R G KVE L P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWQFAEEHTPAVDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C + + C KQ
Sbjct: 189 VCTRSKPKCTLCPVESFCVANKQ 211
>gi|261400294|ref|ZP_05986419.1| A/G-specific adenine glycosylase [Neisseria lactamica ATCC 23970]
gi|269210107|gb|EEZ76562.1| A/G-specific adenine glycosylase [Neisseria lactamica ATCC 23970]
Length = 353
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 8/204 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + N + + ++ ++ Q+ V E T Q + A + +
Sbjct: 13 RWQKQHGRHHLPWQVQNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFPTVQTLAAAPQDE 72
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + ++ +F P + L L G+GR A I + AF
Sbjct: 73 VLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCGVGRSTAAAICAFAFN 131
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPK--HQYNAHYWLVLHGR 203
+D ++ R+ R+ G +K ++ ++P + L+ G
Sbjct: 132 RRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLMDLGA 191
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VCK KP C C ++++C+ KQ
Sbjct: 192 TVCKRTKPLCHQCPMADICEAKKQ 215
>gi|302535149|ref|ZP_07287491.1| A/G-specific adenine glycosylase [Streptomyces sp. C]
gi|302444044|gb|EFL15860.1| A/G-specific adenine glycosylase [Streptomyces sp. C]
Length = 315
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 73/230 (31%), Gaps = 17/230 (7%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLS 58
S + S +P + + +L + + ++V+ +
Sbjct: 10 SHASAPSASRATPASA------ASALHSPVIAWFDEHARDLPWRRPEAGPWGVMVSEFML 63
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
Q+ V + P + A + +G R+ + + +
Sbjct: 64 QQTPVSRVLPVYEQWLARWPRPADLAAEAPGEAVRAWGRLGYPRRALR-LHGAAAAITER 122
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+P+ L LPGIG A + S A+G +DT++ R+ R PN
Sbjct: 123 HGGDVPRDHAQLLALPGIGEYTAAAVASFAYGQRHAVLDTNVRRVFARAATGVEYPPNAT 182
Query: 179 ----EQSLLRIIPPKHQY--NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++P + G VC A+ P C C +S LC
Sbjct: 183 TAAERRLARELLPEDEPTAARWAAASMELGALVCTAKSPDCARCPVSGLC 232
>gi|253563169|ref|ZP_04840626.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_2_5]
gi|251946945|gb|EES87227.1| A/G-specific adenine glycosylase [Bacteroides sp. 3_2_5]
Length = 348
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ K EL + + + + ++ ++ Q+ V +
Sbjct: 3 RNFSNAIENWYKEYKRELPWRDSADPYVIWISEIILQQTRVVQGYDYFVRFMKRFPDVAT 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 63 LAEADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGEYTAA 117
Query: 143 VILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S A+ +P VD +++R+ +R + + ++ K+ +
Sbjct: 118 AICSFAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKLFAAVADELLDRKNPALYNQA 177
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 178 IMDFGAIQCSPQTPNCMFCPLADSCAALAK 207
>gi|325675006|ref|ZP_08154693.1| A/G-specific adenine DNA glycosylase [Rhodococcus equi ATCC 33707]
gi|325554592|gb|EGD24267.1| A/G-specific adenine DNA glycosylase [Rhodococcus equi ATCC 33707]
Length = 306
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 11/199 (5%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ +L + + ++++ ++ Q+ V V + P M A
Sbjct: 19 AALLRWYDEQARDLPWRRDGVTAWHILMSEIMLQQTPVVRVAPIWEEWVRRWPVPSLMAA 78
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + +G R+ + + +L E D+ +P ++ L LPGIG A +
Sbjct: 79 SSQADVLRAWGKLGYPRRALR-LHECAGVLAREHDDVVPADVDVLLSLPGIGDYTARAVA 137
Query: 146 SMAFGIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPP--KHQYNAHYWLV 199
A+G VDT++ R+ R G A P+ + ++P + L+
Sbjct: 138 CFAYGQRVPVVDTNVRRVVARAVHGRADQGNPSAKRDMADVDALLPRTRERAARFSAALM 197
Query: 200 LHGRYVCKARKPQCQSCII 218
G +C AR P C +C +
Sbjct: 198 ELGATICTARTPDCANCPL 216
>gi|254524135|ref|ZP_05136190.1| A/G-specific adenine glycosylase [Stenotrophomonas sp. SKA14]
gi|219721726|gb|EED40251.1| A/G-specific adenine glycosylase [Stenotrophomonas sp. SKA14]
Length = 374
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 12/227 (5%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNK 68
P T +E + L + +L + + + + ++ ++ Q+ V
Sbjct: 2 PRQPHASADTAQEDGFVARLLHWFDGHGRHDLPWQHPRSPYRVWLSEIMLQQTQVATVIP 61
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + A + +G Y ++ N+ + + + D +P+ +
Sbjct: 62 YFLRFLQHFPTLPDLAAASNDAVMAQWAGLGYYA-RARNLHAAAKRCVEVHDGDLPRDFD 120
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQ------- 180
L LPGIGR A ILS A+ P +D ++ R+ +R G +E+
Sbjct: 121 ALHALPGIGRSTAGAILSQAWNDPFAILDGNVKRVLSRYHDIDGFPGLPAIERQLWVIAE 180
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +P + + G VC KP C C + + C ++
Sbjct: 181 AHVAQVPAGRMADYTQAQMDLGATVCSRAKPACVICPLQDDCVARRE 227
>gi|324992873|gb|EGC24793.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK405]
Length = 386
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWETNKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + G+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKSAQQIMTDFAGKFPDSYGGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|257095584|ref|YP_003169225.1| A/G-specific adenine glycosylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048108|gb|ACV37296.1| A/G-specific adenine glycosylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 354
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 9/193 (4%)
Query: 38 SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
+ + +L + + + + ++ ++ Q+ V T + + A +
Sbjct: 24 NGRHDLPWQQTRDAYRIWLSEIMLQQTQVQTVLPYYARFLLRFPTLEALAAAPLDSVLEL 83
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+G Y ++ N+ + ++ E LPGIGR A I AF
Sbjct: 84 WSGLGYYA-RARNLHRCAQTVVAERAGTFSADPIENAGLPGIGRSTAAAISVFAFARRAA 142
Query: 155 GVDTHIFRISNRIGLAPGKTPNKV-EQSLLRI----IPPKHQYNAHYWLVLHGRYVCKAR 209
+D ++ R+ R E++L + +P + ++ G VCK R
Sbjct: 143 ILDGNVKRVLARCFAVEDAGSTAAGERALWALAESLLPDSRIESYTQGMMDLGATVCKRR 202
Query: 210 KPQCQSCIISNLC 222
KP C +C + +C
Sbjct: 203 KPACDACPLREIC 215
>gi|194098743|ref|YP_002001805.1| putative adenine glycosylase [Neisseria gonorrhoeae NCCP11945]
gi|239999040|ref|ZP_04718964.1| putative adenine glycosylase [Neisseria gonorrhoeae 35/02]
gi|240123628|ref|ZP_04736584.1| putative adenine glycosylase [Neisseria gonorrhoeae PID332]
gi|240125812|ref|ZP_04738698.1| putative adenine glycosylase [Neisseria gonorrhoeae SK-92-679]
gi|193934033|gb|ACF29857.1| putative adenine glycosylase [Neisseria gonorrhoeae NCCP11945]
gi|317164334|gb|ADV07875.1| putative adenine glycosylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 346
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 86/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K + ++P ++
Sbjct: 120 STAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 PTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 215
>gi|259505921|ref|ZP_05748823.1| A/G-specific adenine glycosylase [Corynebacterium efficiens YS-314]
gi|259166402|gb|EEW50956.1| A/G-specific adenine glycosylase [Corynebacterium efficiens YS-314]
Length = 308
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 8/200 (4%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + + ++++ ++S Q+ V TPQ
Sbjct: 27 RWFRLNARDLAWRDPDTPAWGILLSEVMSQQTPVARVEPIWLEWMATWPTPQAFAEASTD 86
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ + + +++++ ++P T++ L LPGIG A + + AF
Sbjct: 87 EVLRAWGKLGYPRRALRLL-ECARVIVDKHGGRVPDTVDELLALPGIGDYTARAVAAFAF 145
Query: 150 GIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
G VDT++ R+ R G K + I+P ++ G +C
Sbjct: 146 GQNVPVVDTNVRRVYRRAVEGRFLQGTASKKELVDVAAILPADSGPEFSAGIMELGALIC 205
Query: 207 KARKPQCQSCIISNLCKRIK 226
A P+C SC + LC+ +
Sbjct: 206 TATSPKCASCPLLELCEWQR 225
>gi|148238499|ref|YP_001223886.1| A/G-specific DNA glycosylase MutY [Synechococcus sp. WH 7803]
gi|147847038|emb|CAK22589.1| A/G-specific DNA glycosylase MutY [Synechococcus sp. WH 7803]
Length = 375
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 71/203 (34%), Gaps = 14/203 (6%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
WP P L + + + +A ++ Q+ V E + + E+ +
Sbjct: 30 DQTWPRPDEVL---SPYGIWIAEVMLQQTQLQVVLPYWTRWMERFPRFEDLAEAEEQAVL 86
Query: 93 NYIRTIGIYRKKSENIIS----LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y + ++ ++ P LE LPGIGR A ILS A
Sbjct: 87 LSWQGLGYYSRARRLKVAAGVLMAMGAGGAEPRGWPSDLEPWLALPGIGRSTAGGILSSA 146
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP------PKHQYNAHYWLVLHG 202
F P +D ++ R+ R+ A P + + P + + L+ G
Sbjct: 147 FNSPLAILDGNVRRVLARLQ-AHPTPPMRAQAQFWLWSEALIAAAPGRARDCNQALMDLG 205
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+C R P C C + C
Sbjct: 206 ATLCTPRNPSCPRCPWRDHCAAY 228
>gi|71066538|ref|YP_265265.1| A/G-specific DNA-adenine glycosylase [Psychrobacter arcticus 273-4]
gi|71039523|gb|AAZ19831.1| A/G-specific DNA-adenine glycosylase [Psychrobacter arcticus 273-4]
Length = 453
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 14/206 (6%)
Query: 31 LFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + +L + N + + ++ ++ Q+ V T Q
Sbjct: 56 RLLAWFEINGRHDLPWQQHQTDTPNPYIVWLSEVMLQQTQVTTVLPYFARFMASFPTVQD 115
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRLPGIGRKGA 141
+ A + + +G Y + ++ + + P TL G + G+G A
Sbjct: 116 LAAAEWDTVAEHWAGLGYYARARNLHKGAKQLVEVIDETGEYPTTLAGWEAISGVGPSTA 175
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I++M + D ++ R+ R G ++ R+ P ++
Sbjct: 176 GAIMAMGLHRYGVICDGNVKRVLTRWAAIDGDITKSATTKELWALAERLTPKENSGLFAQ 235
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C KP C C + + C
Sbjct: 236 AMMDMGATLCTRSKPACLLCPLQDDC 261
>gi|15618746|ref|NP_225032.1| endonuclease III [Chlamydophila pneumoniae CWL029]
gi|15836370|ref|NP_300894.1| endonuclease III [Chlamydophila pneumoniae J138]
gi|16752201|ref|NP_445569.1| endonuclease III [Chlamydophila pneumoniae AR39]
gi|33242197|ref|NP_877138.1| endonuclease III [Chlamydophila pneumoniae TW-183]
gi|4377151|gb|AAD18975.1| Enodnuclease III [Chlamydophila pneumoniae CWL029]
gi|7189945|gb|AAF38807.1| endonuclease III [Chlamydophila pneumoniae AR39]
gi|8979211|dbj|BAA99045.1| enodnuclease III [Chlamydophila pneumoniae J138]
gi|33236708|gb|AAP98795.1| endonuclease III [Chlamydophila pneumoniae TW-183]
Length = 209
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ I + +P+PK L + + F L++A+LLS STD VN T LF A Q +L
Sbjct: 3 QFILRTLNALFPNPKPSLEGWSSPFQLLIAILLSGNSTDKAVNSVTPQLFAKAPDAQSIL 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ KL I G+ +KS I LS IL+ +F + P + LT+LPG+GRK A+V
Sbjct: 63 DLPPGKLYQLIAPCGLGERKSAYIYQLSQILVRDFHGEPPNDMALLTQLPGVGRKTASVF 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L +A+G PT VDTHI R++ R ++ K+P+ E+ L R ++ H L+ + R
Sbjct: 123 LGIAYGKPTFPVDTHILRLAQRWKISEKKSPSAAEKDLARFFGHENTPKLHLQLIYYARQ 182
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C A + +C I C + +
Sbjct: 183 YCPALHHKIDNCPI---CSYLAK 202
>gi|25029084|ref|NP_739138.1| hypothetical protein CE2528 [Corynebacterium efficiens YS-314]
gi|23494371|dbj|BAC19338.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 326
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 8/200 (4%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + + ++++ ++S Q+ V TPQ
Sbjct: 45 RWFRLNARDLAWRDPDTPAWGILLSEVMSQQTPVARVEPIWLEWMATWPTPQAFAEASTD 104
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ + + +++++ ++P T++ L LPGIG A + + AF
Sbjct: 105 EVLRAWGKLGYPRRALRLL-ECARVIVDKHGGRVPDTVDELLALPGIGDYTARAVAAFAF 163
Query: 150 GIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
G VDT++ R+ R G K + I+P ++ G +C
Sbjct: 164 GQNVPVVDTNVRRVYRRAVEGRFLQGTASKKELVDVAAILPADSGPEFSAGIMELGALIC 223
Query: 207 KARKPQCQSCIISNLCKRIK 226
A P+C SC + LC+ +
Sbjct: 224 TATSPKCASCPLLELCEWQR 243
>gi|333000467|gb|EGK20048.1| A/G-specific adenine glycosylase [Shigella flexneri K-272]
gi|333015306|gb|EGK34648.1| A/G-specific adenine glycosylase [Shigella flexneri K-227]
Length = 350
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTHSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|223984702|ref|ZP_03634818.1| hypothetical protein HOLDEFILI_02114 [Holdemania filiformis DSM
12042]
gi|223963326|gb|EEF67722.1| hypothetical protein HOLDEFILI_02114 [Holdemania filiformis DSM
12042]
Length = 397
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 9/203 (4%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ EL + + + + V+ +++ Q+ ++ K E T + +
Sbjct: 18 FQEELCAWYKIHHRELPFRQSRDPYAIWVSEIMAQQTRIDSMLPYYKRWMERWPTVEALA 77
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + + + +G Y ++ + + + +++ + +P +E L +PGIG A I
Sbjct: 78 EAPIEDILHVWQGLGYYN-RARKLHAGAKVVVERYGGLLPADVEQLRTIPGIGFYTAGAI 136
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLV 199
S+A+G+ VD ++ R++ R+ K V + + + + ++
Sbjct: 137 GSIAYGLRAPAVDGNVLRVTTRVLQYGEDITKKTTADYVWRQVYDWMEGSNPAVFTQAMM 196
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VC + PQC C ++ C
Sbjct: 197 EIGALVCTPKNPQCLLCPLAPFC 219
>gi|78355259|ref|YP_386708.1| A/G-specific DNA-adenine glycosylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217664|gb|ABB37013.1| A/G-specific DNA-adenine glycosylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 368
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 10/216 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + E + +L + + + V+ ++ Q+
Sbjct: 1 MIHDDDKERFVQALLGWFSVNMRDLPWRRDYTPYRVWVSEIMLQQTQMERGVTYFNRWMG 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ E + +G Y ++ N+ + +++ E P E + LPG
Sbjct: 61 RFPDVAAVARAAENDVLKAWEGLGYYS-RARNLHRAARLIMQEHGGVFPCRYEDIRALPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
+G A I S+AF + VD ++ R+ +R+ K V + ++P
Sbjct: 120 VGDYTAGAIASIAFQQDAVAVDANVERVFSRLFDIDTPIKEKENAAFVRHTAQSLLPRGK 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G VC +K +C C + C+ +
Sbjct: 180 ARLFNQALMELGALVC-GKKARCPLCPVQQWCEAFR 214
>gi|11499282|ref|NP_070520.1| endonuclease III (nth) [Archaeoglobus fulgidus DSM 4304]
gi|2648861|gb|AAB89556.1| endonuclease III (nth) [Archaeoglobus fulgidus DSM 4304]
Length = 209
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 20 YTPKELEEIFYL--FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
P E+ E+ K P + F +VA LLS+++ D +A ++LF
Sbjct: 1 MDPIEVIEVMEREAIKRKAPVYHLKAEIKTPFQHLVAALLSSRTRDEATVRAAQNLFAKV 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ +L + E+++ I+ +G YR K++ + L+ L+ ++ +++P + E L +LPGIG
Sbjct: 61 KKPEDLLKLSEEEIAELIKGVGFYRVKAKRLKELAKKLVEDYSSEVPLSFEELVKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK ANV+L+ IP I VDTH+ RI+NR+G A P + E+ L R+ P + +
Sbjct: 121 RKSANVVLA-YSDIPAIPVDTHVHRIANRLGWARTTKPEETEEVLKRLFPLEFWEKVNRA 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
+V G+ VCK +KP C C I C R+
Sbjct: 180 MVGFGQTVCKPQKPLCDECPIKG-CPRV 206
>gi|145632112|ref|ZP_01787847.1| diaminopimelate epimerase [Haemophilus influenzae 3655]
gi|145634830|ref|ZP_01790538.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittAA]
gi|145636685|ref|ZP_01792352.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittHH]
gi|148827949|ref|YP_001292702.1| 50S ribosomal protein L31 [Haemophilus influenzae PittGG]
gi|144987019|gb|EDJ93549.1| diaminopimelate epimerase [Haemophilus influenzae 3655]
gi|145267996|gb|EDK07992.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittAA]
gi|145270211|gb|EDK10147.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittHH]
gi|148719191|gb|ABR00319.1| 50S ribosomal protein L31 [Haemophilus influenzae PittGG]
gi|309973745|gb|ADO96946.1| A/G-specific adenine glycosylase [Haemophilus influenzae R2846]
Length = 378
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWTLTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|75676789|ref|YP_319210.1| A/G-specific adenine glycosylase MutY [Nitrobacter winogradskyi
Nb-255]
gi|74421659|gb|ABA05858.1| A/G-specific DNA-adenine glycosylase [Nitrobacter winogradskyi
Nb-255]
Length = 415
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 41/232 (17%)
Query: 31 LFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + + L + + + + ++ ++ Q+T V + M
Sbjct: 24 LLLEWYDRNRRLLPWRALPGEPVDPYRVWLSEIMLQQTTVKTVGPYFEKFLARWPDVAAM 83
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G Y ++ N+ + + ++ + + P T E L LPGIG A
Sbjct: 84 ARASLDDILRMWAGLGYYS-RARNLHACAVKVLRDHGGRFPDTEEDLRALPGIGPYTAAA 142
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQY-------- 192
I ++AF T+ VD +I R+ +R+ P + ++ P
Sbjct: 143 IAAIAFNRRTMPVDGNIERVVSRLFAVDEPLPKAKPRIHTLAATLLGPSRSGRDGKSRAG 202
Query: 193 ----------------------NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G +C +KP C C +S+ C
Sbjct: 203 DVKTRAGRDGKSRASDVKTRAGDIAQALMDLGAAICTPKKPSCVLCPLSDDC 254
>gi|330505505|ref|YP_004382374.1| A/G-specific DNA-adenine glycosylase [Pseudomonas mendocina NK-01]
gi|328919791|gb|AEB60622.1| A/G-specific DNA-adenine glycosylase [Pseudomonas mendocina NK-01]
Length = 355
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V T + + E
Sbjct: 12 AWYDQHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPTVKDLAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I+I E + P+++E L LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAQIIIREHGGEFPRSVEALAELPGIGRSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLL----RIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G KV + L R+ P + + ++ G
Sbjct: 131 GVRAPILDGNVKRVLARYVAQEGYPGEPKVAKQLWDVAERLTPHERVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPTCLLCPVRSGCQA 210
>gi|301162555|emb|CBW22102.1| putative A/G-specific adenine glycosylase [Bacteroides fragilis
638R]
Length = 348
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ K EL + + + + ++ ++ Q+ V +
Sbjct: 3 RNFSNAIENWYKEYKRELPWRDSADPYVIWISEIILQQTRVVQGYDYFVRFMKRFPDVAT 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 63 LAEADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGEYTAA 117
Query: 143 VILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S A+ +P VD +++R+ +R + + ++ K+ +
Sbjct: 118 AICSFAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKLFAAVADELLDRKNPALYNQA 177
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 178 IMDFGAIQCSPQTPNCMFCPLADSCAALAK 207
>gi|85060013|ref|YP_455715.1| adenine DNA glycosylase [Sodalis glossinidius str. 'morsitans']
gi|84780533|dbj|BAE75310.1| adenine glycosylase [Sodalis glossinidius str. 'morsitans']
Length = 363
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ + V + T ++ A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVMTVIPYFQRFMAKFPTVGQLAATPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ D + P+ + + LPGIGR A ILS+A +D ++ R+
Sbjct: 88 RNLHKAAQLISVRHDGEFPEDFDAICALPGIGRSTAGAILSLALDRHYPILDGNVKRVLA 147
Query: 166 RIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K + + ++ P + + ++ G VC +P+C+ C +
Sbjct: 148 RYYAIAGWPGKKEVEQRLWRHSEQVTPAQGVAQFNQAMMDLGAMVCTRSRPKCELCPLHR 207
Query: 221 LCKRI 225
C+
Sbjct: 208 GCQAY 212
>gi|329942739|ref|ZP_08291518.1| A/G-specific adenine glycosylase [Chlamydophila psittaci Cal10]
gi|332287336|ref|YP_004422237.1| putative A/G-specific adenine glycosylase [Chlamydophila psittaci
6BC]
gi|313847920|emb|CBY16915.1| putative A/G-specific adenine glycosylase [Chlamydophila psittaci
RD1]
gi|325506948|gb|ADZ18586.1| putative A/G-specific adenine glycosylase [Chlamydophila psittaci
6BC]
gi|328814999|gb|EGF84988.1| A/G-specific adenine glycosylase [Chlamydophila psittaci Cal10]
gi|328914579|gb|AEB55412.1| A/G-specific adenine glycosylase [Chlamydophila psittaci 6BC]
Length = 369
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 89/214 (41%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + + K + + + + V+ ++ Q+ V K E
Sbjct: 8 ERAKNFPIGKLKQWFTDNKRSFPWRDNPSPYNVWVSEVMLQQTRAEVVVKYFIEWMEKFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E+ + +G Y ++ N++ + +++ +F K+P L ++ G+G
Sbjct: 68 TIESLATANEEHVMKAWEGLGYYT-RARNLLQGARMVMTDFGGKLPDDPLDLMQIKGLGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYN 193
+ IL+ AF T VD ++ R+ +R+ L + ++ L +P +
Sbjct: 127 YTVHAILAFAFKRRTAAVDGNVLRVISRVFLINASIDLESTKAWVFRIVLSFLPAQDPQV 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK R P+C+ C ++++C K+
Sbjct: 187 IAEALIELGACICK-RAPKCEICPLNSICGAFKE 219
>gi|240014052|ref|ZP_04720965.1| putative adenine glycosylase [Neisseria gonorrhoeae DGI18]
gi|240016487|ref|ZP_04723027.1| putative adenine glycosylase [Neisseria gonorrhoeae FA6140]
gi|240080612|ref|ZP_04725155.1| putative adenine glycosylase [Neisseria gonorrhoeae FA19]
gi|240113023|ref|ZP_04727513.1| putative adenine glycosylase [Neisseria gonorrhoeae MS11]
gi|240118075|ref|ZP_04732137.1| putative adenine glycosylase [Neisseria gonorrhoeae PID1]
gi|240121616|ref|ZP_04734578.1| putative adenine glycosylase [Neisseria gonorrhoeae PID24-1]
gi|240128331|ref|ZP_04740992.1| putative adenine glycosylase [Neisseria gonorrhoeae SK-93-1035]
Length = 346
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 STAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 PTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 215
>gi|170682894|ref|YP_001745123.1| adenine DNA glycosylase [Escherichia coli SMS-3-5]
gi|170520612|gb|ACB18790.1| A/G-specific adenine glycosylase [Escherichia coli SMS-3-5]
Length = 350
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHSGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSFCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|242240441|ref|YP_002988622.1| adenine DNA glycosylase [Dickeya dadantii Ech703]
gi|242132498|gb|ACS86800.1| A/G-specific adenine glycosylase [Dickeya dadantii Ech703]
Length = 363
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V T + A ++ + +G Y ++
Sbjct: 29 KTPYKVWLSEVMLQQTQVATVIPYFLRFMARFPTVSDLAAAPLDEVLHLWTGLGYYA-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I++ D + P E + LPG+GR A +LS+A +D ++ R+
Sbjct: 88 RNLHKAAGIIVERHDGEFPTHFEEIAALPGVGRSTAGAVLSLALEQHYPILDGNVKRVLA 147
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VEQ L + P + + ++ G VC +P+C+ C +SN
Sbjct: 148 RCYAVAGWPGKKEVEQRLWSLSESVTPAQGVEKFNQAMMDLGAMVCTRSRPKCELCPLSN 207
Query: 221 LCKRI 225
C
Sbjct: 208 GCLAY 212
>gi|90412030|ref|ZP_01220037.1| putative A/G-specific adenine glycosylase [Photobacterium profundum
3TCK]
gi|90327008|gb|EAS43387.1| putative A/G-specific adenine glycosylase [Photobacterium profundum
3TCK]
Length = 356
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + E T Q + A + ++ + +G Y ++
Sbjct: 27 KTPYKVWLSEIMLQQTQVATVIPYFERFMERFPTVQDLAAAEQDEVLHLWTGLGYYA-RA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+++E + P + + LPGIGR A +LS++ +D ++ R
Sbjct: 86 RNLHKAAKIIVSEHNALFPTDIIQVQALPGIGRSTAGAVLSLSLKQHHAILDGNVKRTLA 145
Query: 166 RIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE +L + P + ++ G +C KP+C+ C I
Sbjct: 146 RCYAVEGWPGKKPVENALWEIAEKNTPDSGVERYNQAMMDMGAMICTRSKPKCELCPIEA 205
Query: 221 LCKR 224
+C+
Sbjct: 206 MCEA 209
>gi|301155555|emb|CBW15023.1| adenine DNA glycosylase [Haemophilus parainfluenzae T3T1]
Length = 372
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 75/186 (40%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + ++ + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVSTVIPYFERFIKTFPNVTELANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +E+ + P E + L G+GR A ILS P +D ++ R+ +
Sbjct: 92 RNLHKAAQTIRDEYQGEFPTQFEQVWALTGVGRSTAGAILSSVQNQPYPILDGNVKRVLS 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE L ++ P + ++ G +C KP+C C +SN
Sbjct: 152 RYFAVEGWPGEKKVENQLWQLSEQVTPTTRVAEFNQAMMDIGSAICTRTKPKCDLCPLSN 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLANK 217
>gi|309380022|emb|CBX21433.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 353
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 8/204 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + N + + ++ ++ Q+ V E T Q + A + +
Sbjct: 13 RWQKQHGRHHLPWQVQNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFPTVQTLAAAPQDE 72
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + ++ +F P + L L G+GR A I + AF
Sbjct: 73 VLSLWAGLGYYS-RARNLHKAAQQVVEQFGGTFPSERKDLETLCGVGRSTAAAICAFAFN 131
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQYNAHYWLVLHGR 203
+D ++ R+ R+ G +K + ++P + L+ G
Sbjct: 132 RRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLMDLGA 191
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VCK KP C C ++++C+ KQ
Sbjct: 192 TVCKRTKPLCHQCPMADICEAKKQ 215
>gi|240115780|ref|ZP_04729842.1| putative adenine glycosylase [Neisseria gonorrhoeae PID18]
Length = 346
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYG-RARNLHKAAQQIVGQFGGTFPSERKDLETLCGLGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K ++ ++P ++
Sbjct: 120 STAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLMPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VCK KP C+ C ++++C+ KQ
Sbjct: 180 PTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQ 215
>gi|73662234|ref|YP_301015.1| A G-specific DNA glycosylase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494749|dbj|BAE18070.1| putative A G-specific DNA glycosylase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 10/207 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + E+ + N + + ++ ++ Q+ V + T +
Sbjct: 6 KFKKNLVDWFNKNQREMPWRETSNPYYIWLSEVMLQQTQVKTVIDYYHKFIDRFPTIADL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E ++ Y +G Y ++ N + + + FD ++P E +L G+G
Sbjct: 66 SNAQEDEVLKYWEGLGYYS-RARNFHTAIQDVHHNFDGEVPNHPETFGKLKGVGPYTQAA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
++S+AF +P VD ++FR+ +R + T E+ L + + +
Sbjct: 125 VMSIAFDLPLATVDGNVFRVWSRLNNDTRDIKLQSTRKAFEKELQSYV-ESDAGTFNQAM 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G VC + C C + C+
Sbjct: 184 MELGALVCTPKNTLCMFCPVQEHCEAF 210
>gi|53712846|ref|YP_098838.1| A/G-specific adenine glycosylase [Bacteroides fragilis YCH46]
gi|60681070|ref|YP_211214.1| putative A/G-specific adenine glycosylase [Bacteroides fragilis
NCTC 9343]
gi|52215711|dbj|BAD48304.1| A/G-specific adenine glycosylase [Bacteroides fragilis YCH46]
gi|60492504|emb|CAH07274.1| putative A/G-specific adenine glycosylase [Bacteroides fragilis
NCTC 9343]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ K EL + + + + ++ ++ Q+ V +
Sbjct: 3 RNFSNAIENWYKEYKRELPWRDSADPYVIWISEIILQQTRVVQGYDYFVRFMKRFPDVAT 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 63 LAEADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGEYTAA 117
Query: 143 VILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S A+ +P VD +++R+ +R + + ++ K+ +
Sbjct: 118 AICSFAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKLFAAVADELLDRKNPALYNQA 177
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + P C C +++ C + +
Sbjct: 178 IMDFGAIQCSPQTPNCMFCPLADSCAALAK 207
>gi|332879535|ref|ZP_08447230.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682501|gb|EGJ55403.1| A/G-specific adenine glycosylase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 353
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 12/206 (5%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + + ++ ++ Q+ V + A
Sbjct: 8 HKLLAWYHENRRILPWRDTHDPYIIWISEIILQQTRVVQGYDYFLRFMNRFPDVDALAAA 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ + +G Y + + I+ P+ E + +L G+G A I S
Sbjct: 68 SEDEVLKCWQGLGYYSRARNLHAAARQIVE---WGGFPERYENIRQLKGVGDYTAAAIAS 124
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPP-KHQYNAHYWLVL 200
AFG+P VD +++R+ +R + G ++P K + + ++
Sbjct: 125 FAFGLPHAVVDGNVYRVLSRYYGIEEPIDTGHGKKYFAAMAQELLPEGKEAADYNQAVMD 184
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
G C + P+C+ C + + C +
Sbjct: 185 FGAMQCVPKSPKCEDCPLVDGCAAFR 210
>gi|28198784|ref|NP_779098.1| A/G-specific adenine glycosylase [Xylella fastidiosa Temecula1]
gi|182681483|ref|YP_001829643.1| A/G-specific adenine glycosylase [Xylella fastidiosa M23]
gi|28056875|gb|AAO28747.1| A/G-specific adenine glycosylase [Xylella fastidiosa Temecula1]
gi|182631593|gb|ACB92369.1| A/G-specific adenine glycosylase [Xylella fastidiosa M23]
gi|307579938|gb|ADN63907.1| A/G-specific adenine glycosylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 349
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 10/203 (4%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + + ++ ++ Q+ V E T ++ A +
Sbjct: 14 DQYGRHHLPWQHPRTPYRVWISEIMLQQTQVSVVIPYFLRFLERFPTLPELAAADTDAVM 73
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y ++ ++ + + +P L LPGIGR A ILS A+
Sbjct: 74 AHWAGLGYYA-RARHLHVAAKRCVELHGGDLPHDQNALQALPGIGRSTAAAILSQAWNDR 132
Query: 153 TIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRII-------PPKHQYNAHYWLVLHGRY 204
+D +I R+ +R+ + + +E+ L + P + + G
Sbjct: 133 APILDGNIKRVLSRLHGIVGWSGQSMIEKELWELAGAYVLQAPTGRLADYTQAQMDFGAT 192
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC +P C C + + C ++
Sbjct: 193 VCTRLRPACLICPLQDGCVAWRE 215
>gi|171742259|ref|ZP_02918066.1| hypothetical protein BIFDEN_01365 [Bifidobacterium dentium ATCC
27678]
gi|171277873|gb|EDT45534.1| hypothetical protein BIFDEN_01365 [Bifidobacterium dentium ATCC
27678]
Length = 329
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + W +L + + ++V+ ++S Q+ V + E +
Sbjct: 32 VAESLAEWWHESARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWQAWMERWPDAAAL 91
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + ++ +++ + +P+T + L LPGIG A+
Sbjct: 92 ADASKADVITAWGRLGYPRRALR-LQECARMVADDYHDDLPRTYDELVALPGIGDYTASA 150
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYN------- 193
++S A+G +DT+I R+ +R+ L + G + E++L + P+
Sbjct: 151 VMSFAYGERIAVIDTNIRRVLSRVFLGAESRGGAASPAERALANRVLPEDSAARCRGFDR 210
Query: 194 ----AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C A+ P C+ C ++ C
Sbjct: 211 PSVVWNQSVMELGAVICTAKSPLCEQCPVAAEC 243
>gi|88797897|ref|ZP_01113485.1| A/G-specific adenine glycosylase [Reinekea sp. MED297]
gi|88779574|gb|EAR10761.1| A/G-specific adenine glycosylase [Reinekea sp. MED297]
Length = 353
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 75/202 (37%), Gaps = 10/202 (4%)
Query: 34 LKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + ++ ++ Q+ V + E +
Sbjct: 14 AWYDRHGRKDLPWQTGKTAYRVWLSEVMLQQTQVTTVIPYFQAFTERFPDVAALAEADID 73
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + +++ F + P E L LPG+GR A I+S F
Sbjct: 74 EVLHLWTGLGYYA-RARNLHKAAKAVMDSFGGEFPADPEALETLPGVGRSTAAAIVSSVF 132
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
+D ++ R+ +R ++ + P + + ++ G
Sbjct: 133 DRRAAILDGNVKRVLSRFFALEEWPGSTAAQKQLWAWSEALTPQTRVADYNQVMMDLGAL 192
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VCK +P C C +S C +
Sbjct: 193 VCKRSRPACAECPLSEECLAHR 214
>gi|319897742|ref|YP_004135939.1| adenine DNA glycosylase [Haemophilus influenzae F3031]
gi|317433248|emb|CBY81623.1| adenine DNA glycosylase [Haemophilus influenzae F3031]
Length = 378
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLV 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCTRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|309802210|ref|ZP_07696318.1| putative A/G-specific adenine glycosylase [Bifidobacterium dentium
JCVIHMP022]
gi|308221093|gb|EFO77397.1| putative A/G-specific adenine glycosylase [Bifidobacterium dentium
JCVIHMP022]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 81/213 (38%), Gaps = 19/213 (8%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + W +L + + ++V+ ++S Q+ V + E +
Sbjct: 26 VAESLAEWWHESARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWQAWMERWPDAAAL 85
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + ++ ++ + +P+T + L LPGIG A+
Sbjct: 86 ADASKADVITAWGRLGYPRRALR-LQECARMVADDCHDDLPRTYDELVALPGIGDYTASA 144
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN---------- 193
++S A+G +DT+I R+ +R+ L + + +
Sbjct: 145 VMSFAYGERIAVIDTNIRRVLSRVFLGAESRGGAASPAERALANKVLPEDSAARCRGFDR 204
Query: 194 ----AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C A+ P C+ C ++ C
Sbjct: 205 PSAVWNQSVMELGAVICTAKSPLCEQCPVAAEC 237
>gi|145630502|ref|ZP_01786282.1| A/G-specific adenine glycosylase [Haemophilus influenzae R3021]
gi|144983892|gb|EDJ91334.1| A/G-specific adenine glycosylase [Haemophilus influenzae R3021]
Length = 240
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTMRVADFNQAMMDIGAMVCMRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|323351546|ref|ZP_08087200.1| A/G-specific adenine glycosylase [Streptococcus sanguinis VMC66]
gi|322122032|gb|EFX93758.1| A/G-specific adenine glycosylase [Streptococcus sanguinis VMC66]
Length = 386
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWGADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q ++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQDMMEILIDPGR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|224367145|ref|YP_002601308.1| NthA [Desulfobacterium autotrophicum HRM2]
gi|223689861|gb|ACN13144.1| NthA [Desulfobacterium autotrophicum HRM2]
Length = 221
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 24 ELEEIFYLFSLK---WPSPKGEL---YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
++E+ + + + + P +L F ++VA +LSA++ D A K LF+ A
Sbjct: 4 DIEKFIDILAKEVADYKVPIIDLMGAQTEEPFRILVATILSARTKDETTAAACKRLFKKA 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + +++ + I +G Y KS + L + FD K+PQ ++ L LPG+G
Sbjct: 64 PDVNALAGLSRQEISDLIYPVGFYTSKSGYLERLP-KAMEAFDGKVPQNIDDLVTLPGVG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
RK AN+++S+AF I VDTH+ RI N + P + E +L + +PPK +
Sbjct: 123 RKTANLVMSVAFKKDAICVDTHVHRIMNLWEYVDTRNPLETEMALRKKLPPKLWQRVNAI 182
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
LV G+ C+ C C++ ++C +
Sbjct: 183 LVAFGQGTCRPVGSHCDVCVLESMCPK 209
>gi|169614824|ref|XP_001800828.1| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
gi|160702827|gb|EAT81956.2| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
Length = 1058
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 29/252 (11%)
Query: 2 VSSKKSDSYQGNSPLGCLY---------TPKELEEIFYLFSLKWPSPKGELYY------- 45
++S K +P + P EEI+ L +
Sbjct: 91 IASPKKPKKARRTPAKKIKGEDGTIKIEPPANWEEIYALTREMRNENIAPVDTMGCESLA 150
Query: 46 ---VNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI---GEKKLQNYI 95
F +VA++LS+Q+ D A +++ E + ++ L I
Sbjct: 151 DRERTPRDQRFQTLVALMLSSQTKDTVTAVAMRNMQENMPGGFNLESVLALPPPDLNAMI 210
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+G + K++ I + + IL ++FD +IP ++EGL LPG+G K A + +S A+G
Sbjct: 211 NKVGFHNLKTKYIKATAEILRDKFDGEIPDSIEGLVSLPGVGPKMAYLTMSAAWGKDEGI 270
Query: 156 -VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VD H+ RI+N G +TP + +L +P ++ + LV HG+ +C +C
Sbjct: 271 GVDVHVHRITNLWGWNKTQTPEQTRAALESWLPRDKWHDINNLLVGHGQTICLPVGRKCG 330
Query: 215 SCIISN--LCKR 224
C +++ LC
Sbjct: 331 ECKLADRGLCPS 342
>gi|156100939|ref|XP_001616163.1| endonuclease III homologue [Plasmodium vivax SaI-1]
gi|148805037|gb|EDL46436.1| endonuclease III homologue, putative [Plasmodium vivax]
Length = 417
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V+ +LS ++ D + A + L T ML E++LQ I+ +G Y+ K++ I
Sbjct: 227 FQTLVSCMLSTRTRDESTAMAMQKLKAHGLTIHNMLKTPEEELQKLIQAVGFYKIKAKQI 286
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA-FGIPTIGVDTHIFRISNRI 167
I +S IL +++D IP TLEGL +LPGIG+K A++IL A I VD H+ RISNR+
Sbjct: 287 IQISQILRDQYDYDIPHTLEGLLKLPGIGQKVAHLILQTALDTHEGIAVDIHVHRISNRL 346
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K + + L +P + LV G+ VCKA+ P C C +++ CK +
Sbjct: 347 NWVCTKNESATQSKLESFVPRTLWSELNKTLVGFGQVVCKAKSPHCNMCAVTDGCKYYQ 405
>gi|327474485|gb|EGF19891.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK408]
Length = 386
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L + +G Y + N+ + ++ +F K P + E + L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWQGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEEIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV QS++ +I P
Sbjct: 130 IGSYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQSSNRKVFQSMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|223940410|ref|ZP_03632263.1| DNA-(apurinic or apyrimidinic site) lyase [bacterium Ellin514]
gi|223890905|gb|EEF57413.1| DNA-(apurinic or apyrimidinic site) lyase [bacterium Ellin514]
Length = 242
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELY---YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + E F+ EL + + F +VA ++S ++ D + LF +A T
Sbjct: 34 ERVREAIKPFAKA---AMFELADDGFNSVFEQLVACIISIRTLDEVTIPTARKLFAVART 90
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P ++ + KK+ I + K+ I +++ + F +P E L L G+G K
Sbjct: 91 PGQVSRLQVKKIDELISACTFHEAKARTIRTIASEAVQRFGGALPCDGEKLMELHGVGPK 150
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN++L +A G I VD H+ R++NR G +TP + +L +P ++ + LV
Sbjct: 151 CANLVLGIACGQGKISVDIHVHRVTNRWGYVQTRTPEQTMAALEAKLPKQYWIEINSLLV 210
Query: 200 LHGRYVCKARKPQCQSCIISNLCK 223
G+++C R P+C +C + +C+
Sbjct: 211 PFGKHICTGRTPKCSTCPVLEMCQ 234
>gi|225351756|ref|ZP_03742779.1| hypothetical protein BIFPSEUDO_03353 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158100|gb|EEG71383.1| hypothetical protein BIFPSEUDO_03353 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 321
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E + + W + +L + + ++V+ ++S Q+ V E
Sbjct: 19 ENAEAVADALAEWWHASARDLPWRFGRTTTWGVLVSEVMSQQTQMSRVVPYWNDWMERWP 78
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + +G R+ + + ++ +++DNK+P+T + L LPGIG
Sbjct: 79 DAVALADAAKADVITAWGRLGYPRRALR-LQECARVVASDYDNKLPRTYDELLALPGIGD 137
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLR-IIPPKHQYN- 193
A+ ++S AFG VDT+I R+ +R+ L + G E++L + ++P
Sbjct: 138 YTASAVMSFAFGERIAVVDTNIRRVLSRVFLGEESLGGAARPAERALAKQMLPQDDASKC 197
Query: 194 ---------AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC A+ P C++C +S C
Sbjct: 198 RRFDRPSVVWNQSVMELGATVCTAKAPLCEACPVSGHC 235
>gi|262274547|ref|ZP_06052358.1| A/G-specific adenine glycosylase [Grimontia hollisae CIP 101886]
gi|262221110|gb|EEY72424.1| A/G-specific adenine glycosylase [Grimontia hollisae CIP 101886]
Length = 167
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/162 (50%), Positives = 117/162 (72%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
+NKAT L+ +A+TPQ ML +G + ++ YI+TIG++ K+EN+I ILI + ++P+
Sbjct: 1 MNKATDKLYPVANTPQAMLDLGVEGVKEYIKTIGLFNSKAENVIKTCKILIEQHGGEVPE 60
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
E L LPG+GRK ANV+L+ AFG PTI VDTHIFR+SNR A GK ++VEQ LL++
Sbjct: 61 NREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDQVEQKLLKV 120
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + + + H+WL+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 121 VPKEFKVDVHHWLILHGRYTCVARKPRCGSCIIEDLCEFKDK 162
>gi|328946276|gb|EGG40420.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1087]
Length = 386
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V +
Sbjct: 11 MWEADKIASFRKKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYARFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + E + L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEEIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + + + +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMIEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|327470009|gb|EGF15473.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK330]
Length = 389
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFVGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGHPSNRKVFQAMMEILIDPGR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|71901778|ref|ZP_00683847.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Ann-1]
gi|71728461|gb|EAO30623.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Ann-1]
Length = 349
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 11/212 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + F + + + + ++ ++ Q+ V E T ++
Sbjct: 6 AQRLLTWFDK-YGRHHLPWQHPRTPYRVWISEIMLQQTQVAVVIPYFLRFLERFPTLPEL 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + + +G Y ++ ++ + + +P L LPGIGR A
Sbjct: 65 AAADTDAVMAHWAGLGYYA-RARHLHVAAKRCVELHGGDLPHDQNALQALPGIGRSTAAA 123
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRII-------PPKHQYNAH 195
ILS A+ +D +I R+ +R+ + + +E+ L + P +
Sbjct: 124 ILSQAWNDRAPILDGNIKRVLSRLHGIVGWSGQSMIEKELWELAEAYVLQAPTGRLADYT 183
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC +P C C + + C ++
Sbjct: 184 QAQMDFGATVCTRLRPACLICPLQDGCVAWRE 215
>gi|306822200|ref|ZP_07455582.1| A/G-specific adenine glycosylase [Bifidobacterium dentium ATCC
27679]
gi|304554582|gb|EFM42487.1| A/G-specific adenine glycosylase [Bifidobacterium dentium ATCC
27679]
Length = 329
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 81/213 (38%), Gaps = 19/213 (8%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + W +L + + ++V+ ++S Q+ V + E +
Sbjct: 32 VAESLAEWWHESARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWQAWMERWPDAAAL 91
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + ++ ++ + +P+T + L LPGIG A+
Sbjct: 92 ADASKADVITAWGRLGYPRRALR-LQECARMVADDCHDDLPRTYDELVALPGIGDYTASA 150
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN---------- 193
++S A+G +DT+I R+ +R+ L + + +
Sbjct: 151 VMSFAYGERIAVIDTNIRRVLSRVFLGAESRGGAASPAERALANKVLPEDSAARCRGFDR 210
Query: 194 ----AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C A+ P C+ C ++ C
Sbjct: 211 PSAVWNQSVMELGAVICTAKSPLCEQCPVAAEC 243
>gi|323669731|emb|CBJ94855.1| A/G-specific adenine glycosylase [Salmonella bongori]
Length = 350
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KSPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLAKAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ K PQT + + LPG+GR A +LS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVVALHGGKFPQTFDEVAALPGVGRSTAGAVLSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + ++ G +C KP+C C + +
Sbjct: 147 RCYAISGWPGKKEVENTLWSLSEQVTPAHGVERFNQAMMDLGAMICTRSKPKCSLCPLQS 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|89889611|ref|ZP_01201122.1| adenine glycosylase [Flavobacteria bacterium BBFL7]
gi|89517884|gb|EAS20540.1| adenine glycosylase [Flavobacteria bacterium BBFL7]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 10/202 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + + ++ ++ Q+ + T ++ +
Sbjct: 7 LIKWYEIHKRDLPWRSTQNPYYIWLSEVILQQTRVNQGLPYYYRFVKTYPTVHELALAPQ 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + + +G Y + + ++ PQT + L +L G+G A I S A
Sbjct: 67 EDVLKLWQGLGYYSRARNLHAAAQQVVD--MGGVFPQTYKDLLQLKGVGDYTAAAIASFA 124
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F VD +++R+ +R+ + + + ++++ + ++ G
Sbjct: 125 FQEAVPVVDGNVYRVLSRVYGISTPINESAGIKEFKNLAIKLLDHNQPDVYNQAIMEFGA 184
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
C R P C C N C
Sbjct: 185 IQCVPRNPDCTVCPFQNDCVAF 206
>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
LSv54]
Length = 480
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++VA +LSA++ D ++K LF A T +++ + E++LQ I +G Y+ K+
Sbjct: 32 EDPFKVLVATILSARTKDETTAASSKRLFARAQTAEELTELSEEELQKLIYPVGFYKNKA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ L L +P+T+ L RLPG+GRK AN++LS+AF P I VDTH+ RI N
Sbjct: 92 GYLKKLPEALKEFKGV-VPETMTELLRLPGVGRKTANLVLSIAFKKPAICVDTHVHRIMN 150
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G TP K E +L +P + + LV G+ +C+ P+C C + C
Sbjct: 151 IWGYVETATPLKTEMALREKLPEEFWIPVNSLLVSLGQSICRPVSPRCSECPLEKECP 208
>gi|27065214|pdb|1KG6|A Chain A, Crystal Structure Of The K142r Mutant Of E.Coli Muty (Core
Fragment)
Length = 225
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVRRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|255087428|ref|XP_002505637.1| predicted protein [Micromonas sp. RCC299]
gi|226520907|gb|ACO66895.1| predicted protein [Micromonas sp. RCC299]
Length = 574
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 70/185 (37%), Gaps = 11/185 (5%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++S Q+ V + E + + +++ +G YR+
Sbjct: 183 AYGVWVSEIMSQQTQIERVAQYWLRWTERWPDVSSLASATREEVNELWAGLGYYRRAG-F 241
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
++ + +++ D P +GL +PG+G A I S+AF P VD ++ R+ R+
Sbjct: 242 LLDGARHVVDNCDTIFPNDAKGLANVPGVGPYTAAAIASIAFDEPVAAVDGNVIRVCTRL 301
Query: 168 GLAPG--------KTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCI 217
G K + + + + ++ G VC + P C C
Sbjct: 302 AAVTGGGDAAKPSSDAAKAVRLCADWLIDDSTRPGDFNQAMMELGATVCTPKAPACGQCP 361
Query: 218 ISNLC 222
+ C
Sbjct: 362 LRVGC 366
>gi|302345169|ref|YP_003813522.1| A/G-specific adenine glycosylase [Prevotella melaninogenica ATCC
25845]
gi|302149948|gb|ADK96210.1| A/G-specific adenine glycosylase [Prevotella melaninogenica ATCC
25845]
Length = 334
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + L + + + + ++ ++ Q+ V + T + A E
Sbjct: 7 LLQWFKNNGRSLPWRETKDAYAIWLSEVILQQTRIVQGMSYWERFMAKWPTVNDLAAATE 66
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + ++ PQT + L L G+G A I S+A
Sbjct: 67 NEVLKAWQGLGYYSRARNLHTAAQQVMELGGF---PQTFKELKTLKGVGDYTAAAIASIA 123
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG P VD +++R+ +R + + + + ++P + + ++ G
Sbjct: 124 FGEPVAVVDGNVYRVLSRYYGIETPIDSTEGKKEFQTLAQSLLPINEPADYNEAIMDFGA 183
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
C P C +C + C ++
Sbjct: 184 TQCTPNSPHCSACPLCETCVAFRE 207
>gi|222055487|ref|YP_002537849.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. FRC-32]
gi|221564776|gb|ACM20748.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. FRC-32]
Length = 218
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 102/179 (56%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F ++++ +LS ++ D + A+ LF +ADTP K+ A+ + ++ + +G +R K+
Sbjct: 34 SPFKVLISCILSLRTQDKTTSAASDRLFALADTPDKLAALPVEIIEKLVYPVGFFRVKAA 93
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
I +S +L+ + K+P +E L G+GRK AN+++++ +G P I VDTH+ RI NR
Sbjct: 94 QIKEISRLLMERYQGKVPDEIEELLTFKGVGRKTANLVVTLGYGKPGICVDTHVHRICNR 153
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G +TP + EQ+L +P ++ + LV G+ C P C +C + +C R+
Sbjct: 154 WGYVVTRTPEQTEQALRGKLPTEYWLMINDLLVTFGQNQCYPISPICSTCPLREMCDRV 212
>gi|194878547|ref|XP_001974085.1| GG21536 [Drosophila erecta]
gi|190657272|gb|EDV54485.1| GG21536 [Drosophila erecta]
Length = 383
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 96/179 (53%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + + TP ++ + +L+N + + Y+ K++ +
Sbjct: 202 FQNLVALMLSSQTKDQTTYEAMNRLKDRSPTPLQVKEMPVTELENLLHPVSFYKNKAKYL 261
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
ILI+++D+ IP ++ L LPG+G K A++ +++A+ T VD H+ R+ NR+
Sbjct: 262 KQTVEILIDKYDSDIPDNVKDLIALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLCNRL 321
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 322 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPS 380
>gi|58582767|ref|YP_201783.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84624643|ref|YP_452015.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188577554|ref|YP_001914483.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427361|gb|AAW76398.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84368583|dbj|BAE69741.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188522006|gb|ACD59951.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 357
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDAHGRHDLPWQHPRAPYRVWLSEIMLQQTQVTVVIPYFHKFVARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVTLHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--------TPNKVEQSLLRIIPPKHQY 192
A ILS A+ P +D ++ R+ R G ++ + + +PP
Sbjct: 129 AGAILSQAWNDPFAIMDGNVKRVLTRFHGIGGYPGLPVIEKQLWQLAAAHVAHVPPGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQHDCSARR 222
>gi|315222716|ref|ZP_07864605.1| A/G-specific adenine glycosylase [Streptococcus anginosus F0211]
gi|315188402|gb|EFU22128.1| A/G-specific adenine glycosylase [Streptococcus anginosus F0211]
Length = 389
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ +++ + K +L + N + + ++ ++ Q+ V +
Sbjct: 11 MWEDEKIISFRQKLLAWYDENKRDLPWRRSSNPYHIWISEIMLQQTRVDTVIPYYERFLA 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E++L +G Y + N+ + ++ +F + P T E ++ L G
Sbjct: 71 WFPTIKDLAMASEERLLKAWEGLGYYS-RVRNMQQAAQQIMTDFSGEFPHTYEEISSLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+P VD ++ R+ +R+ KV Q+++ +I P+
Sbjct: 130 IGPYTAGAIASIAFGLPEPAVDGNVMRVLSRLFEVNLDIGVPANRKVFQAMMEILIDPQK 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P+ + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPRPEDSPVREF 220
>gi|71737884|ref|YP_277020.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558437|gb|AAZ37648.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326484|gb|EFW82536.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331777|gb|EFW87715.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872625|gb|EGH06774.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|118395856|ref|XP_001030273.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila]
gi|89284570|gb|EAR82610.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila SB210]
Length = 371
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++A++LS Q+ D + K + + T K + I +L+ I+ + KK E I
Sbjct: 184 FQKLMAIILSVQTKDETTDLVMKKVVKEKITIDKAVEIPSSELKEIIKQVNFNGKKVEYI 243
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + ++ N ++ IP E L ++ GIG K AN+ L A+ I VDTH+ RISNR+
Sbjct: 244 KNAAEVIKNTYNYVIPDQYEDLIKIKGIGPKVANLFLQCAYNKTVGIAVDTHVHRISNRL 303
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
KTP + L +++ K+ + + LV +G+ VCK + PQCQ C + + C ++
Sbjct: 304 EWVSTKTPEQTRIELEKLLDKKYWEDVNNLLVGYGQSVCKPQNPQCQICPVKDKCPEGRR 363
>gi|330980634|gb|EGH78737.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E + Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPSVQALADAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRNVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|296118948|ref|ZP_06837521.1| putative A/G-specific adenine glycosylase [Corynebacterium
ammoniagenes DSM 20306]
gi|295968046|gb|EFG81298.1| putative A/G-specific adenine glycosylase [Corynebacterium
ammoniagenes DSM 20306]
Length = 287
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 74/197 (37%), Gaps = 5/197 (2%)
Query: 32 FSLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + L + + + ++++ ++S Q+ V + TP
Sbjct: 7 LLTWFDLNERPLPWRDKNTSAWGVLISEVMSQQTPVARVAPQWQEWISRWPTPTDFAQAS 66
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G R+ + + ++++ ++P +E L LPGIG A +
Sbjct: 67 KAEVLRAWGKLGYPRRALR-LHECAQAIVDKHGGEVPSGVEELLALPGIGAYTARAVACF 125
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
FG VDT++ R+ R P + L ++ L+ G VC
Sbjct: 126 HFGQNVPVVDTNVRRVYGRAVTGQFLQPQPSTKELAQVAEVTTGPRCSAALMELGALVCT 185
Query: 208 ARKPQCQSCIISNLCKR 224
A+ P+C C I C+
Sbjct: 186 AKNPKCDICPIRLSCQW 202
>gi|229844627|ref|ZP_04464766.1| A/G-specific adenine glycosylase [Haemophilus influenzae 6P18H1]
gi|229812341|gb|EEP48031.1| A/G-specific adenine glycosylase [Haemophilus influenzae 6P18H1]
Length = 378
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTARVADFNQAMMDIGAMVCMRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|291456189|ref|ZP_06595579.1| putative A/G-specific adenine glycosylase [Bifidobacterium breve
DSM 20213]
gi|291381466|gb|EFE88984.1| putative A/G-specific adenine glycosylase [Bifidobacterium breve
DSM 20213]
Length = 320
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 36/234 (15%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWNDWMARWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + + +G R+ + + ++ E+ +++P+T + L LPGIG A+
Sbjct: 66 AAAPKADVITAWGRLGYPRRALR-LQECARVVAEEYGDELPRTYDELVALPGIGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQS-LLRIIPPKH-QYN----- 193
+LS AFG +DT+I R+ +R+ L + G + VE++ R++P +
Sbjct: 125 VLSFAFGERIAVIDTNIRRVLSRVFLGTESRGGAASPVERALANRMLPQDRVCGDGADCT 184
Query: 194 ---------------------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C+ C I++ C +K
Sbjct: 185 DHAYRSGEHTFLQRSEPPSVTWNQSVMELGAVVCTAKTPLCEICPIADDCAFLK 238
>gi|323493570|ref|ZP_08098691.1| A/G-specific adenine glycosylase [Vibrio brasiliensis LMG 20546]
gi|323312093|gb|EGA65236.1| A/G-specific adenine glycosylase [Vibrio brasiliensis LMG 20546]
Length = 351
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDNYGRKSLPWQQNKSAYSVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + ++ ++ + P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKVVTEQYGGEFPLNIEEMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRY 204
P +D ++ R R G KVE L P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWQYAQEHTPSVDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C + + C KQ
Sbjct: 189 VCTRSKPKCTLCPVESYCVAKKQ 211
>gi|93007108|ref|YP_581545.1| A/G-specific adenine glycosylase [Psychrobacter cryohalolentis K5]
gi|92394786|gb|ABE76061.1| A/G-specific DNA-adenine glycosylase [Psychrobacter cryohalolentis
K5]
Length = 453
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 14/206 (6%)
Query: 31 LFSLKWPSP-KGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + +L + N + + ++ ++ Q+ V + T Q
Sbjct: 56 RLLAWFADNGRHDLPWQQHQTDTPNPYIVWLSEVMLQQTQVTTVLPYFARFMDSFPTVQD 115
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRLPGIGRKGA 141
+ A + + +G Y + ++ + PQTL G + G+G A
Sbjct: 116 LAAAEWDTIAEHWAGLGYYARARNLHKGAKQLVAVIDETGDFPQTLAGWEAISGVGPSTA 175
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLL----RIIPPKHQYNAHY 196
I+SM + D ++ R+ R G + L R+ P +
Sbjct: 176 GAIMSMGLHRYGVICDGNVKRVLTRWAAIDGDITKSATTKDLWALAERLTPREQSGLFAQ 235
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C KP C C + + C
Sbjct: 236 AMMDMGATLCTRSKPACLLCPLQDDC 261
>gi|297570872|ref|YP_003696646.1| HhH-GPD family protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931219|gb|ADH92027.1| HhH-GPD family protein [Arcanobacterium haemolyticum DSM 20595]
Length = 296
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 11/204 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
++ + + L + + + +++ ++S Q+ V E TP +
Sbjct: 9 LYTELTEWFACNARPLPWRETRDPWAILLCEVMSQQTPVARVEPTWYAWLERWPTPADLA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A + +G R+ + + + FD ++P+T + L LPGIG A+ +
Sbjct: 69 AASPADVLLAWDRMGYPRRALR-LRECAQAITERFDGQVPRTRDDLLSLPGIGPYTADAV 127
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII------PPKHQYNAHYWL 198
L+ A+ ++ +DT+I R+ R P + + L R P K + +
Sbjct: 128 LAFAYEDYSVVLDTNIRRVLARWHGEALPAPAQTKAELARATSLVPTNPQKAWR-WNASI 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ G +C AR +C C + + C
Sbjct: 187 MEFGALICTARNAKCVECPVVDTC 210
>gi|284989237|ref|YP_003407791.1| HhH-GPD family protein [Geodermatophilus obscurus DSM 43160]
gi|284062482|gb|ADB73420.1| HhH-GPD family protein [Geodermatophilus obscurus DSM 43160]
Length = 300
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 10/202 (4%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + ++V+ ++ Q+ V + TP + A
Sbjct: 17 EVLVDWFADAARDLPWRRPGTDPWAVLVSEVMLQQTPVARVEPVWRQWMGRWPTPAALAA 76
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + L +P + L LPGIG A +
Sbjct: 77 ASPAEVIRAWGKLGYPRRALR-LRETAVALTERHGGVVPADVAALEALPGIGTYTARAVA 135
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPPK--HQYNAHYWLVL 200
G P VDT++ R+ R+ + + + P ++
Sbjct: 136 CFGHGQPQPVVDTNVRRVVARLVHGRAEAAPARAADLTDVAALAPADPGRAARFSVAVME 195
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G VC AR P+C +C + C
Sbjct: 196 LGALVCVARTPRCAACPVRTDC 217
>gi|323344509|ref|ZP_08084734.1| A/G-specific adenine glycosylase [Prevotella oralis ATCC 33269]
gi|323094636|gb|EFZ37212.1| A/G-specific adenine glycosylase [Prevotella oralis ATCC 33269]
Length = 347
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + + + + ++ ++ Q+ + + + + E
Sbjct: 13 LLRWFKENKRDLPWRDTADAYAIWLSEVILQQTRIQQGKAYWERFMKRFPRVEDLAEADE 72
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + I+ N+ P+T +G+ RL G+G A + S+A
Sbjct: 73 DEVLRLWQGLGYYSRARNLHHAAQQIVANKG---FPRTYDGIRRLKGVGDYTAAAVASIA 129
Query: 149 FGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+P VD +++R+ +R + + ++P + L+ G
Sbjct: 130 FGLPVAAVDGNVYRVLSRVFGIDTPINSTEGKKTFAALAQSLLPSDAPSAFNQALMDFGA 189
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
C + P+C C + C+ ++
Sbjct: 190 IQCTPQSPRCVLCPFTESCEALR 212
>gi|284006824|emb|CBA72090.1| A/G-specific adenine glycosylase [Arsenophonus nasoniae]
Length = 346
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 28 KSPYHVWLSEVMLQQTQVATVIPYFEKFINHFPDITSLANASQDEILHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-S 164
N+ + ++ +D P E + LPGIGR A ILS++ +D ++ R+ +
Sbjct: 87 RNLHKAAQQIVANYDGNFPNKFEQVISLPGIGRSTAGAILSLSQNQHFPILDGNVKRVLT 146
Query: 165 NRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
G+A +VE L + P + ++ G +C KP+C+ C +
Sbjct: 147 RYYGIAGWPGKKEVENQLWTLSTQVTPANDVQYFNQAMMDLGAMICCRSKPKCELCPLQK 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCHAF 211
>gi|257437984|ref|ZP_05613739.1| A/G-specific adenine glycosylase [Faecalibacterium prausnitzii
A2-165]
gi|257199644|gb|EEU97928.1| A/G-specific adenine glycosylase [Faecalibacterium prausnitzii
A2-165]
Length = 351
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 10/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E I + + + L + + + ++ ++ Q+ +
Sbjct: 1 MENIAPALLDWFYANRRILPFREDPTPYHVWLSEIMLQQTRVSAALPYYERFLAALPDIP 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL +G Y + N+ + I+ ++ ++P L LPGIG A
Sbjct: 61 ALAGCEEEKLHKLWEGLGYYS-RVRNLQKAAKIVCAQYGGQLPADYNALLALPGIGEYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHY 196
I S++FG+P VD ++ R+ R+ + + ++ PP + +
Sbjct: 120 GAIASISFGLPVPAVDGNVLRVFARLYNDPRLVTDPQVKREFTARVMEHQPPAKAGDYNQ 179
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
L+ G VC P C+ C + LC+
Sbjct: 180 ALMELGALVCLPNGAPLCEQCPLGTLCRA 208
>gi|257483728|ref|ZP_05637769.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|298489308|ref|ZP_07007323.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156159|gb|EFH97264.1| A/G-specific adenine glycosylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330987174|gb|EGH85277.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|157149958|ref|YP_001450505.1| A/G-specific adenine glycosylase [Streptococcus gordonii str.
Challis substr. CH1]
gi|157074752|gb|ABV09435.1| A/G-specific adenine glycosylase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 382
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEADKIASFRENLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPLNPHPEDSPVKEF 220
>gi|5822134|pdb|1MUY|A Chain A, Catalytic Domain Of Muty From Escherichia Coli
gi|27065206|pdb|1KG2|A Chain A, Crystal Structure Of The Core Fragment Of Muty From E.Coli
At 1.2a Resolution
gi|27065207|pdb|1KG3|A Chain A, Crystal Structure Of The Core Fragment Of Muty From E.Coli
At 1.55a Resolution
Length = 225
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|166711625|ref|ZP_02242832.1| A/G-specific adenine glycosylase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 357
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 78/214 (36%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFHKFVARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVALHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI-------IPPKHQY 192
A ILS A+ P +D ++ R+ R G +E+ L ++ +PP
Sbjct: 129 AGAILSQAWNDPFAIMDGNVKRVLTRFHGIGGYPGLPVIEKQLWQLAASHVAHVPPGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQHNCSARR 222
>gi|71412348|ref|XP_808363.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70872553|gb|EAN86512.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
K L+ + +++A++LSAQ+ D A L I TP+ + + EK L +I +G
Sbjct: 41 KAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGCTPEVIAKMPEKTLDGFISKVG 100
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDT 158
+ KK+++I + ++ ++P + E L LPGIG K A++ L A G+ VDT
Sbjct: 101 FHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQEADGVVLGIGVDT 160
Query: 159 HIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
H+ RIS R P KTP ++L +P K+ + LV G+ +C R P+C C
Sbjct: 161 HVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPRLPRCSEC 220
Query: 217 IISNLCK-RIKQ 227
S+LC K+
Sbjct: 221 PASDLCPNAFKE 232
>gi|326798550|ref|YP_004316369.1| A/G-specific adenine glycosylase [Sphingobacterium sp. 21]
gi|326549314|gb|ADZ77699.1| A/G-specific adenine glycosylase [Sphingobacterium sp. 21]
Length = 374
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+EI + K +L + N + + ++ ++ Q+ T +
Sbjct: 27 QEII----QWYHQNKRDLPWRNTTDPYIIWLSEIILQQTRVEQGLPYFNRFVAAYPTVRD 82
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
E ++ + +G Y ++ N+ + ++ ++D P+ L +LPGIG A
Sbjct: 83 FAEAAEGEILRLWQGLGYYS-RARNMHKAAQTIMQQYDGIFPKEYNSLIKLPGIGEYTAA 141
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S + P +D ++FR+ R + GK + ++ + +
Sbjct: 142 AIASFSSNEPKAVLDGNVFRVLARYFGISEAINTGKGKKLFSKIAEEMLDKANASVYNQA 201
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G CK + P C C IS C +++
Sbjct: 202 IMEFGALQCKPQSPNCAVCPISIGCYALRE 231
>gi|309791484|ref|ZP_07685988.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG6]
gi|308226481|gb|EFO80205.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG6]
Length = 219
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 25 LEEIFYLFSLKWPSPKGEL------YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + L PS L F ++VA LLS ++ D LF AD
Sbjct: 7 ITTVLDLIEATLPSFNQPLIDQMSAEQQTPFRILVATLLSLRTKDTLTAVVAPRLFAHAD 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP MLA+GE+++ I +G Y K+ ++I+++H+L+ ++ +P LE L LPG+GR
Sbjct: 67 TPAAMLALGEQRIAELIYPVGFYHNKARSLIAIAHMLLERYNGAVPSDLEALLTLPGVGR 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K AN++ + FG+P I VD H+ RI+NR G K P+ E +L ++P ++ + L
Sbjct: 127 KTANLVRTAGFGLPGICVDIHVHRITNRWGYVATKDPDATEMALRTMLPAQYWIPINRLL 186
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
V G+ +C P+C +C ++ C RI
Sbjct: 187 VTWGQNICHPTSPRCSTCPVATYCARI 213
>gi|255008358|ref|ZP_05280484.1| putative A/G-specific adenine glycosylase [Bacteroides fragilis
3_1_12]
Length = 348
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ V + +
Sbjct: 7 NTIEKWYQEYKRELPWRESADPYVIWISEIILQQTRVVQGYDYFMRFMKRFPDVATLAQA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 67 DEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGDYTAAAICS 121
Query: 147 MAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R + + ++ K+ + ++
Sbjct: 122 FAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKLFAAVADELLDKKNPALYNQAIMDF 181
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C +++ C +
Sbjct: 182 GAIQCSPQSPNCMFCPLASGCSAL 205
>gi|290579802|ref|YP_003484194.1| putative A/G-specific DNA glycosylase [Streptococcus mutans NN2025]
gi|254996701|dbj|BAH87302.1| putative A/G-specific DNA glycosylase [Streptococcus mutans NN2025]
Length = 381
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWNQDKIISFRKTLLTWYNQEKRDLPWRRTKNPYCIWVSEIMLQQTQVQTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +K+ E+KL +G Y + ++ + ++ +FD K P T E + +L G
Sbjct: 71 CFPTIEKLADAPEEKLLKAWEGLGYYS-RVRHMQKAAQQVMTDFDGKFPSTYETIAQLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+H
Sbjct: 130 IGPYTAGAIASIAFDLPQPAVDGNVMRVIARLFEVNYDIGEAKNRKIFQAIMKILIDPEH 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + A+ P+ I +
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPAESPIRSF 220
>gi|260913353|ref|ZP_05919834.1| A/G-specific adenine glycosylase [Pasteurella dagmatis ATCC 43325]
gi|260632584|gb|EEX50754.1| A/G-specific adenine glycosylase [Pasteurella dagmatis ATCC 43325]
Length = 372
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + E + ++ + +G Y ++
Sbjct: 33 KSLYGVWLSEVMLQQTQVATVIPYFERFVETFPNVTALANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P E + L G+GR A +LS P +D ++ R+
Sbjct: 92 RNLHKAAQTIRDQYAGEFPTEFEKVLALTGVGRSTAGAVLSSCLDAPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE L ++ P N + ++ G VC KP+C C +
Sbjct: 152 RYFTVAGWPGEKKVEDKLWQLTEEVTPTSQVANFNQAMMDLGAMVCTRSKPKCNLCPLRA 211
Query: 221 LCKR 224
C+
Sbjct: 212 YCQA 215
>gi|27065210|pdb|1KG5|A Chain A, Crystal Structure Of The K142q Mutant Of E.Coli Muty (Core
Fragment)
Length = 225
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVQRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|330891675|gb|EGH24336.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|326565727|gb|EGE15890.1| A/G-specific adenine glycosylase [Moraxella catarrhalis 12P80B1]
Length = 410
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 79/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVCGDITKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|46445723|ref|YP_007088.1| putative A/G-specific adenine glycosylase, mutY [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399364|emb|CAF22813.1| putative A/G-specific adenine glycosylase, mutY [Candidatus
Protochlamydia amoebophila UWE25]
Length = 352
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 10/204 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ S K +L + + + ++ ++ Q+ V + + + +
Sbjct: 8 EKLKKWFLSSKRDLPWRQNPTPYAVWISEVMLQQTQVAVVIPYFNRWMQAFPSIEALAIA 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+++ +G Y ++ ++ + L+ ++P + L ++ G+G ILS
Sbjct: 68 SLEEVIKAWEGLGYYS-RARHLHQGAQYLVEHCQGELPADEKELKKIKGLGPYTIGAILS 126
Query: 147 MAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
AF VD ++ R+ R +A T K+ I+P + + + L+
Sbjct: 127 FAFHQKKAAVDGNVLRVLARYFQIEEDIAKTSTIKKLRDFAESILPDEESWISSEALIEL 186
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G +C +RK CQ C + + C+
Sbjct: 187 GATIC-SRKAICQECPLKSNCQSY 209
>gi|332527364|ref|ZP_08403420.1| A/G-specific DNA-adenine glycosylase [Rubrivivax benzoatilyticus
JA2]
gi|332111773|gb|EGJ11753.1| A/G-specific DNA-adenine glycosylase [Rubrivivax benzoatilyticus
JA2]
Length = 352
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 9/191 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V + + + A ++
Sbjct: 19 RHTLPWQNTRDPYRIWLSEVMLQQTQVATVLGYYERFLQRFPDVAALAAAPLDEVLALWS 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ E + P L LPGIGR A I + A+G +
Sbjct: 79 GLGYYS-RARNLHRCAQAVVAEHGGRFPPDAATLATLPGIGRSTAAAIAAFAYGERAAIL 137
Query: 157 DTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R LA + + ++P + L+ G VC AR+P
Sbjct: 138 DGNVKRVLTRAIGFGGDLARPAEERALWRQAEALLPEQDIERYTQGLMDLGATVCLARRP 197
Query: 212 QCQSCIISNLC 222
QC C ++ +C
Sbjct: 198 QCLLCPLAEVC 208
>gi|289624101|ref|ZP_06457055.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289649381|ref|ZP_06480724.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330868919|gb|EGH03628.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|260587969|ref|ZP_05853882.1| A/G-specific adenine glycosylase [Blautia hansenii DSM 20583]
gi|260541496|gb|EEX22065.1| A/G-specific adenine glycosylase [Blautia hansenii DSM 20583]
Length = 350
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 10/207 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
LE+I + + K L + + + + ++ ++ Q+ V E +
Sbjct: 2 LEQIVEPLLIWYEKNKRSLPWRDESTPYHVWISEIMLQQTRVEAVKGYYARFIEALPEIK 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E++L +G Y + +N+ + ++ +D K+P E L L GIG A
Sbjct: 62 DLAECPEERLLKLWEGLGYYN-RVKNMQKAAREVMEFYDGKLPADYEKLLSLSGIGSYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
+ S+A+GI VD ++ R+ N + T ++E++L +I+P +
Sbjct: 121 GAVASIAYGISKPAVDGNVLRVITRITENPSDILKQSTKREMEKNLEKIMPVHAPGAFNQ 180
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLC 222
L+ G VC +C+ C ++ C
Sbjct: 181 SLMELGATVCVPNGMAKCECCPVAEFC 207
>gi|150401058|ref|YP_001324824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
gi|150013761|gb|ABR56212.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
Length = 357
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ +LSA++ D ++ +K L++ ++ I ++LQ I +G Y+ K+++
Sbjct: 36 AFKVLISTVLSARTKDETTDEVSKRLYKKVKNIDDLINIDIEELQELIYPVGFYKTKAKH 95
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L+ ++ N ++ KIP + L +LPG+GRK AN+++++AF I VDTH+ RISNR
Sbjct: 96 LKELALMVKNNYNGKIPNDINELVKLPGVGRKTANLVITLAFDDYGICVDTHVHRISNRW 155
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
+P K E L + +P K+ + LV++GR VC P+C CI I C
Sbjct: 156 NFVNTPSPEKTEMELRKKLPKKYWKTINNSLVVYGREVCAPI-PKCSKCIQEIKETCPYY 214
Query: 226 KQ 227
+
Sbjct: 215 DK 216
>gi|116074390|ref|ZP_01471652.1| putative adenine glycosylase [Synechococcus sp. RS9916]
gi|116069695|gb|EAU75447.1| putative adenine glycosylase [Synechococcus sp. RS9916]
Length = 412
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 15/204 (7%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+WP P L + F + +A ++ Q+ V + + T Q + A E+ +
Sbjct: 54 DQRWPQPDELL---SPFGIWIAEVMLQQTQLQVVLPYWQGWMQSFPTLQALAAADEQAVL 110
Query: 93 NYIRTIGIYRKKSENIISL-----SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G Y + + + PQ L+ LPGIGR A ILS
Sbjct: 111 LRWQGLGYYSRARRLHATARLLLAPLDGDPTDPARWPQDLDAWLALPGIGRSTAGGILSS 170
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI------IPPKHQYNAHYWLVLH 201
AF P +D ++ R+ R+ A + P + + R + P+ + + L+
Sbjct: 171 AFNSPLAILDGNVRRVLARLM-AHPRPPMRDQALFWRWSEALIAVVPQRSRDLNQALMDL 229
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G +C R P C C + C
Sbjct: 230 GATLCTPRNPSCGRCPWQHACAAY 253
>gi|288941572|ref|YP_003443812.1| A/G-specific adenine glycosylase [Allochromatium vinosum DSM 180]
gi|288896944|gb|ADC62780.1| A/G-specific adenine glycosylase [Allochromatium vinosum DSM 180]
Length = 355
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 73/196 (37%), Gaps = 9/196 (4%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + V+ ++ Q+ V + T + A + +
Sbjct: 21 RHDLPWQRDPTPYRVWVSEIMLQQTQVSVVIPYFERFMASFPTLADLAAAELDAVLAHWS 80
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + N+ + ++ P+ + LPGIGR A ILS+A G +
Sbjct: 81 GLGYYA-RGRNLHRAAVLIRERHGGVFPEDFAAVESLPGIGRSTAGAILSLACGQRHPIL 139
Query: 157 DTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R+ G ++ + P + + ++ G +C +P
Sbjct: 140 DGNVKRVLARVFGVDGWPGQRAVLAELWRLAECCTPQTRAGSYNQGMMDLGATLCTRTRP 199
Query: 212 QCQSCIISNLCKRIKQ 227
C C ++ C +Q
Sbjct: 200 DCARCPLAGRCVAQRQ 215
>gi|229507090|ref|ZP_04396596.1| A/G-specific adenine glycosylase [Vibrio cholerae BX 330286]
gi|229509074|ref|ZP_04398562.1| A/G-specific adenine glycosylase [Vibrio cholerae B33]
gi|229606254|ref|YP_002876902.1| A/G-specific adenine glycosylase [Vibrio cholerae MJ-1236]
gi|229353999|gb|EEO18933.1| A/G-specific adenine glycosylase [Vibrio cholerae B33]
gi|229355835|gb|EEO20755.1| A/G-specific adenine glycosylase [Vibrio cholerae BX 330286]
gi|229368909|gb|ACQ59332.1| A/G-specific adenine glycosylase [Vibrio cholerae MJ-1236]
Length = 378
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 230 FCLAKQQ 236
>gi|326568318|gb|EGE18398.1| A/G-specific adenine glycosylase [Moraxella catarrhalis BC7]
gi|326574818|gb|EGE24748.1| A/G-specific adenine glycosylase [Moraxella catarrhalis 101P30B1]
Length = 410
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 80/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G T ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVFGDVTKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|330939279|gb|EGH42678.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E + Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPSVQALADAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRNVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|291544966|emb|CBL18075.1| A/G-specific adenine glycosylase [Ruminococcus sp. 18P13]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 10/218 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T + L E +P+ +L + + + ++ ++ Q+ V + +
Sbjct: 1 MRTNQLLSESVEKLLAWYPAHARDLPWRQDQEPYHVWLSEIMLQQTRVEAVKGYYRRFLQ 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ E++L +G Y + N+ + ++ E P + +L G
Sbjct: 61 ALPDIAALADAPEEQLLKLWEGLGYYN-RVRNLQKAARQIMTEHSGVFPGEYAKIRKLSG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRII----PPKH 190
IG A I S+ F PT VD ++ R+ +RI KV+Q + P
Sbjct: 120 IGPYTAGAIASICFEQPTPAVDGNVLRVMSRILNDHSCVDLPKVKQRFTEQLAAVYPAGQ 179
Query: 191 QYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
L+ G VC P+C +C + LC +Q
Sbjct: 180 CGMLTQALMELGATVCVPNGAPRCDACPVRELCIAHEQ 217
>gi|84515027|ref|ZP_01002390.1| A/G-specific adenine glycosylase [Loktanella vestfoldensis SKA53]
gi|84511186|gb|EAQ07640.1| A/G-specific adenine glycosylase [Loktanella vestfoldensis SKA53]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 16/206 (7%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + + + + + ++ ++ Q+T V + + +
Sbjct: 13 LLDWYDRHARAMPWRVPPADRKAGVAPDPYAIWLSEVMLQQTTVAAVRDYHRKFTALWPS 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + A + + +G Y ++ N++ + +++ E P+ L LPGIG
Sbjct: 73 VRDLAAADDAAVMAAWAGLGYYA-RARNLLKCARVVVAEHGGTFPRNHATLLTLPGIGPY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A I ++AF P VD ++ R+ R+ P ++ + P +
Sbjct: 132 TAAAIGAIAFDAPETVVDGNVERVMARMFDIHTPLPAAKPELTGRARALTPQHRAGDYAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C R P C C C
Sbjct: 192 AVMDLGATICTPRNPACGICPWHAPC 217
>gi|330954804|gb|EGH55064.1| A/G-specific adenine glycosylase [Pseudomonas syringae Cit 7]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALADAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P + N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHRRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|269960454|ref|ZP_06174827.1| A/G-specific adenine glycosylase [Vibrio harveyi 1DA3]
gi|269834881|gb|EEZ88967.1| A/G-specific adenine glycosylase [Vibrio harveyi 1DA3]
Length = 358
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + ++++ + P LE + LPGIGR A +LS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKEVAHKYNGEFPLDLEQMNALPGIGRSTAAAVLSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVDGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C +S+LC KQ
Sbjct: 189 MCTRSKPKCTLCPVSDLCVAKKQ 211
>gi|229530295|ref|ZP_04419683.1| A/G-specific adenine glycosylase [Vibrio cholerae 12129(1)]
gi|229332068|gb|EEN97556.1| A/G-specific adenine glycosylase [Vibrio cholerae 12129(1)]
Length = 378
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 230 FCLAKQQ 236
>gi|16272700|ref|NP_438918.1| A/G-specific adenine glycosylase [Haemophilus influenzae Rd KW20]
gi|260579850|ref|ZP_05847680.1| A/G-specific adenine glycosylase [Haemophilus influenzae RdAW]
gi|1171084|sp|P44320|MUTY_HAEIN RecName: Full=A/G-specific adenine glycosylase
gi|1573768|gb|AAC22418.1| A/G-specific adenine glycosylase (mutY) [Haemophilus influenzae Rd
KW20]
gi|260093134|gb|EEW77067.1| A/G-specific adenine glycosylase [Haemophilus influenzae RdAW]
Length = 378
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAVEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCMRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|204928168|ref|ZP_03219368.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322490|gb|EDZ07687.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length = 350
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPAHGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|322817731|gb|EFZ25370.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
K L+ + +++A++LSAQ+ D A L I TP+ + + EK L +I +G
Sbjct: 41 KAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGCTPEVIAKMPEKTLDGFISKVG 100
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDT 158
+ KK+++I + ++ ++P + E L LPGIG K A++ L A G+ VDT
Sbjct: 101 FHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQEADGVVLGIGVDT 160
Query: 159 HIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
H+ RIS R P KTP ++L +P K+ + LV G+ +C R P+C C
Sbjct: 161 HVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPRLPRCSEC 220
Query: 217 IISNLCK-RIKQ 227
S+LC K+
Sbjct: 221 PASDLCPNAFKE 232
>gi|325922809|ref|ZP_08184537.1| A/G-specific DNA-adenine glycosylase [Xanthomonas gardneri ATCC
19865]
gi|325546696|gb|EGD17822.1| A/G-specific DNA-adenine glycosylase [Xanthomonas gardneri ATCC
19865]
Length = 357
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 13/210 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + + +L + + + ++ ++ Q+ V T
Sbjct: 10 ADAFVHRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFHKFVASFPTL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + + +G Y ++ N+ + + + D +P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVALHDGDLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRI-------IPPKHQY 192
A ILS A+ +D ++ R+ G+A +E+ L ++ +P
Sbjct: 129 AGAILSQAWSDRFAIMDGNVKRVMTRFHGIAGYPGLPVIEKQLWQLATAHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + G +C KP C C + + C
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQDDC 218
>gi|6137464|pdb|1MUD|A Chain A, Catalytic Domain Of Muty From Escherichia Coli, D138n
Mutant Complexed To Adenine
gi|157832060|pdb|1MUN|A Chain A, Catalytic Domain Of Muty From Escherichia Coli D138n
Mutant
Length = 225
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G ++ ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILNGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|27065209|pdb|1KG4|A Chain A, Crystal Structure Of The K142a Mutant Of E. Coli Muty
(Core Fragment)
gi|55670671|pdb|1WEG|A Chain A, Catalytic Domain Od Muty Form Escherichia Coli K142a
Mutant
Length = 225
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVARVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|225022131|ref|ZP_03711323.1| hypothetical protein CORMATOL_02164 [Corynebacterium matruchotii
ATCC 33806]
gi|224945064|gb|EEG26273.1| hypothetical protein CORMATOL_02164 [Corynebacterium matruchotii
ATCC 33806]
Length = 304
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 83/217 (38%), Gaps = 17/217 (7%)
Query: 21 TPKELEEI----FYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKH 72
TP++ E+ + + ++ + + ++++ ++S Q+ V
Sbjct: 8 TPEKSAELRTVLHRRLPTWFAANARDIAWRTPETSAWGVLLSEVMSQQTQVSRVEPIWLE 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
TP A ++ +G R+ + + ++ + +P + L
Sbjct: 68 WINRWPTPTDFAAARIDEVLRAWGRLGYPRRALR-LHECAQQIVAHHNGVVPADVAELLA 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSLLR-IIPPK 189
LPGIG A + + A+G VDT++ R+ R ++P+K E +++ ++P
Sbjct: 127 LPGIGDYTARAVAAFAYGQRVPVVDTNVRRVLARFYHGEYEPRSPSKRELAVMESLLPDA 186
Query: 190 ----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C P+C C + + C
Sbjct: 187 DGGVDPAKFSTAIMELGALICT-TTPKCGDCPLRSSC 222
>gi|260642005|ref|ZP_05859190.1| A/G-specific adenine glycosylase [Bacteroides finegoldii DSM 17565]
gi|260623866|gb|EEX46737.1| A/G-specific adenine glycosylase [Bacteroides finegoldii DSM 17565]
Length = 347
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)
Query: 30 YLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + + ++ ++ Q+ V +
Sbjct: 4 ETIIEWYKENKRDLPWRDSSDPYLIWISEVILQQTRVVQGYDYFLRFIGRFPDVSTLADA 63
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 64 EEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGEYTAAAICS 118
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R + + ++ K + ++
Sbjct: 119 FAYNMPYAVVDGNVYRVLSRYFGIETPIDSTAGKKLFTELANEMLDKKQPALYNQGIMDF 178
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C + P C C +S C + +
Sbjct: 179 GAIQCTPQSPDCLFCPLSVGCSALSK 204
>gi|108801709|ref|YP_641906.1| HhH-GPD [Mycobacterium sp. MCS]
gi|119870860|ref|YP_940812.1| HhH-GPD family protein [Mycobacterium sp. KMS]
gi|126437696|ref|YP_001073387.1| HhH-GPD family protein [Mycobacterium sp. JLS]
gi|108772128|gb|ABG10850.1| HhH-GPD [Mycobacterium sp. MCS]
gi|119696949|gb|ABL94022.1| HhH-GPD family protein [Mycobacterium sp. KMS]
gi|126237496|gb|ABO00897.1| HhH-GPD family protein [Mycobacterium sp. JLS]
Length = 288
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 8/192 (4%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V E TP A G
Sbjct: 9 AWYDREQRDLPWRRPGVTPWQILVSEFMLQQTPVARVEPIWLSWIERWPTPSATAAAGVA 68
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G ++++ + + ++ E +++P +E L LPGIG A + A+
Sbjct: 69 DVLRAWGKLGY-PRRAKRLHECATVIAIEHGDEVPSDVEVLLTLPGIGAYTARAVACFAY 127
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIPP-KHQYNAHYWLVLHGRYVC 206
G VDT++ R+ R +P + ++P ++ G VC
Sbjct: 128 GQRVPVVDTNVRRVIARAVHGRADSPPSSRDLDDVATLLPEGPEAPRFSVAVMELGATVC 187
Query: 207 KARKPQCQSCII 218
AR P+C C +
Sbjct: 188 TARTPRCGLCPL 199
>gi|254508613|ref|ZP_05120729.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus 16]
gi|219548464|gb|EED25473.1| A/G-specific adenine glycosylase [Vibrio parahaemolyticus 16]
Length = 351
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYENYGRKSLPWQQDKTAYSVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + ++ ++ + P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKVVAEQYGGEFPLNIEEMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRY 204
P +D ++ R R G KVE L P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWHYAEAHTPDVDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C + ++C +Q
Sbjct: 189 VCTRSKPKCTLCPVESMCVAKQQ 211
>gi|104784110|ref|YP_610608.1| A/G specific adenine glycosylase [Pseudomonas entomophila L48]
gi|95113097|emb|CAK17825.1| A/G specific adenine glycosylase [Pseudomonas entomophila L48]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + E
Sbjct: 12 AWYDQHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAAKIVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R+ P + ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQAGYPGEPKVANQLWATAERVTPMTRVNHFTQAMMDMGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLICPLQRGCEA 210
>gi|77359510|ref|YP_339085.1| A/G-specific adenine glycosylase [Pseudoalteromonas haloplanktis
TAC125]
gi|76874421|emb|CAI85642.1| A/G-specific adenine glycosylase [Pseudoalteromonas haloplanktis
TAC125]
Length = 352
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V V + + + E ++ ++ +G Y ++
Sbjct: 33 KTPYKVWVSEVMLQQTQVVTVIPYFERFMQSFPDIIALANADEDQVLHHWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ +++ + P TLE + LPGIGR A +LS++ G +D ++ R+
Sbjct: 92 RNLHKTAKIVRDKYQGQFPTTLEEVIDLPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + G KVE L ++ P + + ++ G +C + C +C +S+
Sbjct: 152 RFFMVEGWYGVKKVESQLWHLSEQLTPKNNVTEFNQAMMDLGSSLCSRSRFDCPACPLSS 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 RCGAFK 217
>gi|167551997|ref|ZP_02345750.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205323304|gb|EDZ11143.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 350
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|322613507|gb|EFY10448.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621099|gb|EFY17957.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624163|gb|EFY20997.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628098|gb|EFY24887.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633217|gb|EFY29959.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636205|gb|EFY32913.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639543|gb|EFY36231.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647524|gb|EFY44013.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648708|gb|EFY45155.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653763|gb|EFY50089.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657869|gb|EFY54137.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663972|gb|EFY60171.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669017|gb|EFY65168.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672989|gb|EFY69096.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678020|gb|EFY74083.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681196|gb|EFY77229.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687874|gb|EFY83841.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194930|gb|EFZ80117.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199634|gb|EFZ84724.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202619|gb|EFZ87659.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207894|gb|EFZ92840.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212554|gb|EFZ97371.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214963|gb|EFZ99711.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222693|gb|EGA07058.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225436|gb|EGA09668.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230549|gb|EGA14667.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235100|gb|EGA19186.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239139|gb|EGA23189.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244503|gb|EGA28509.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247118|gb|EGA31084.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253399|gb|EGA37228.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256294|gb|EGA40030.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262530|gb|EGA46086.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267374|gb|EGA50858.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269222|gb|EGA52677.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 350
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 SC 208
>gi|163841907|ref|YP_001626312.1| A/G-specific adenine DNA glycosylase [Renibacterium salmoninarum
ATCC 33209]
gi|162955383|gb|ABY24898.1| A/G-specific adenine DNA glycosylase [Renibacterium salmoninarum
ATCC 33209]
Length = 345
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 11/220 (5%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNK 68
++ L +++ K+L I + EL + + ++V+ ++ Q+ V V
Sbjct: 19 STTLDAVHSAKDLLSIKARVVNWFDQSARELPWRAPDCTPWGILVSEVMLQQTPVVRVLP 78
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ TP + A + +G R+ + + + + FD +P T++
Sbjct: 79 VWLQWQQRWRTPADLDADSSGEAVRAWGRLGYPRRALR-LHAAAVEIAERFDGVVPGTVD 137
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI--- 185
L LPGIG A + + AFG VDT+I R+ R+ + + +R+
Sbjct: 138 ELKSLPGIGDYTAAAVAAFAFGARATVVDTNIRRVHARLFSGRALPAPSLSAAEMRLAEE 197
Query: 186 -IPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+P + + G +C AR PQC C + C
Sbjct: 198 LLPKDRSDSVAWNAAAMELGALICTARSPQCVICPVRADC 237
>gi|269302624|gb|ACZ32724.1| putative enodnuclease III [Chlamydophila pneumoniae LPCoLN]
Length = 209
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ I + +P+PK L + + F L++A+LLS STD VN T LF A Q +L
Sbjct: 3 QFILRTLNTLFPNPKPSLEGWSSPFQLLIAILLSGNSTDKAVNSVTPQLFAKAPDAQSIL 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ KL I G+ +KS I LS IL+ +F + P + LT+LPG+GRK A+V
Sbjct: 63 DLPPGKLYQLIAPCGLGERKSAYIYQLSQILVRDFHGEPPNDMALLTQLPGVGRKTASVF 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L +A+G PT VDTHI R++ R ++ K+P+ E+ L R ++ H L+ + R
Sbjct: 123 LGIAYGKPTFPVDTHILRLAQRWKISEKKSPSAAEKDLARFFGHENTPKLHLQLIYYARQ 182
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
C A + +C I C + +
Sbjct: 183 YCPALHHKIDNCPI---CSYLAK 202
>gi|229519742|ref|ZP_04409185.1| A/G-specific adenine glycosylase [Vibrio cholerae RC9]
gi|229344431|gb|EEO09406.1| A/G-specific adenine glycosylase [Vibrio cholerae RC9]
Length = 374
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 230 FCLAKQQ 236
>gi|254447401|ref|ZP_05060867.1| A/G-specific adenine glycosylase [gamma proteobacterium HTCC5015]
gi|198262744|gb|EDY87023.1| A/G-specific adenine glycosylase [gamma proteobacterium HTCC5015]
Length = 354
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 12/207 (5%)
Query: 26 EEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ S + +L + + + V+ ++ Q+ V + T +
Sbjct: 4 RSFSERLLAWYRVSGRHDLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMASFPTLE 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + + ++ + +G Y + + +E +P +E L LPGIG A
Sbjct: 64 DLASATQDQVLQHWSGLGYYARGRNLHKAARQA--HEAWGDLPDDVEALEALPGIGHSTA 121
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP-----PKHQYNAH 195
I S+AFG + +D ++ R+ R G V + L +
Sbjct: 122 GAISSIAFGRRALILDGNVKRVLARHRAVSGWPGRTAVSRELWQWADLYTPSAVQAGEYA 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C +P+C C ++ C
Sbjct: 182 QAIMDLGATLCTRTQPRCGECPVAEDC 208
>gi|254850682|ref|ZP_05240032.1| A/G-specific adenine glycosylase [Vibrio cholerae MO10]
gi|254846387|gb|EET24801.1| A/G-specific adenine glycosylase [Vibrio cholerae MO10]
Length = 368
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 41 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 99
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 100 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 159
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 160 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 219
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 220 FCLAKQQ 226
>gi|91762758|ref|ZP_01264723.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718560|gb|EAS85210.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 326
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 35 KWPSPKGELYYVNH-------FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + K L + + +V+ + Q+ V + + + + I
Sbjct: 13 WYDNNKRSLPWRKELSQVKREYFTLVSEFMLQQTQVATVIPYFNNFIKDIPDIKSLSKIK 72
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E KL Y +G Y + +N+ + IL F+ ++P T++ L LPGIG +N I+++
Sbjct: 73 EHKLLKYWEGLGYYS-RVKNLKKTAQILEKNFNRRLPNTIDELKLLPGIGDYTSNAIMAI 131
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP-----KHQYNAHYWLVLHG 202
AF P I +D +I R+ R L K P ++ + L + L+ G
Sbjct: 132 AFNKPFIPLDGNIERVIKR--LLNLKLPKEITKDNLVKNKKILGNSTRASDYAQALMELG 189
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C+ + P C C + CK K+
Sbjct: 190 ALICRPKNPLCHQCPLIKNCKSFKK 214
>gi|330970723|gb|EGH70789.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPTVQVLAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ E + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVAEHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|331082461|ref|ZP_08331587.1| hypothetical protein HMPREF0992_00511 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400947|gb|EGG80548.1| hypothetical protein HMPREF0992_00511 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 350
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 10/207 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
LE+I + + K L + + + + ++ ++ Q+ V E +
Sbjct: 2 LEQIVEPLIIWYEKNKRSLPWRDESTPYHVWISEIMLQQTRVEAVKGYYARFIEALPEIK 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E++L +G Y + +N+ + ++ +D K+P E L L GIG A
Sbjct: 62 DLAECPEERLLKLWEGLGYYN-RVKNMQKAAREVMEFYDGKLPADYEKLLSLSGIGSYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRIS-----NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
+ S+A+GI VD ++ R+ N + T ++E++L +I+P +
Sbjct: 121 GAVASIAYGISKPAVDGNVLRVITRITENPSDILKQSTKREMEKNLEKIMPVHAPGAFNQ 180
Query: 197 WLVLHGRYVCKARK-PQCQSCIISNLC 222
L+ G VC +C+ C ++ C
Sbjct: 181 SLMELGATVCVPNGMAKCECCPVAEFC 207
>gi|296113744|ref|YP_003627682.1| A/G-specific adenine glycosylase [Moraxella catarrhalis RH4]
gi|295921438|gb|ADG61789.1| A/G-specific adenine glycosylase [Moraxella catarrhalis RH4]
Length = 410
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 80/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G T ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVFGDVTKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|262191062|ref|ZP_06049269.1| A/G-specific adenine glycosylase [Vibrio cholerae CT 5369-93]
gi|262033038|gb|EEY51569.1| A/G-specific adenine glycosylase [Vibrio cholerae CT 5369-93]
Length = 353
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|119475535|ref|ZP_01615888.1| A / G specific adenine glycosylase [marine gamma proteobacterium
HTCC2143]
gi|119451738|gb|EAW32971.1| A / G specific adenine glycosylase [marine gamma proteobacterium
HTCC2143]
Length = 363
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 11/224 (4%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNK 68
S L E+ I + + +L + N + + V+ ++ Q+ V
Sbjct: 2 TSKPIHLPKYAEIA-ISERVLDWFAHSGRKDLPWQKDINPYRVWVSEIMLQQTQVSTVIP 60
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ + + ++ + +G Y ++ N+ + I+ + P T++
Sbjct: 61 YFQQFMLELPDIDTLAEASDDQVMHLWTGLGYYT-RARNLHKTAQIISQQHLGIFPDTVD 119
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRI-- 185
L LPGIGR A I+S+A P +D ++ R+ R G +V + L +
Sbjct: 120 SLVELPGIGRSTAGAIVSIAHKKPAAILDGNVKRVLARHQAIDGWPGKTQVLRELWLLAE 179
Query: 186 --IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P K + ++ G +C KP C C ++ C +Q
Sbjct: 180 TCTPSKQVADYSQAMMDLGATLCTRSKPACTLCPLTQDCIARQQ 223
>gi|313146082|ref|ZP_07808275.1| A/G-specific adenine glycosylase [Bacteroides fragilis 3_1_12]
gi|313134849|gb|EFR52209.1| A/G-specific adenine glycosylase [Bacteroides fragilis 3_1_12]
Length = 352
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K EL + + + + ++ ++ Q+ V + +
Sbjct: 11 NTIEKWYQEYKRELPWRESADPYVIWISEIILQQTRVVQGYDYFMRFMKRFPDVATLAQA 70
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ Y + +G Y + + + P+T + L G+G A I S
Sbjct: 71 DEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVRALKGVGDYTAAAICS 125
Query: 147 MAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
A+ +P VD +++R+ +R + + ++ K+ + ++
Sbjct: 126 FAYNMPYAVVDGNVYRVLSRYLGIDTPIDSTEGKKLFAAVADELLDKKNPALYNQAIMDF 185
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G C + P C C +++ C +
Sbjct: 186 GAIQCSPQSPNCMFCPLASGCSAL 209
>gi|28872454|ref|NP_795073.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855709|gb|AAO58768.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331017083|gb|EGH97139.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTARIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERACEA 210
>gi|294626163|ref|ZP_06704769.1| A/G-specific adenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599515|gb|EFF43646.1| A/G-specific adenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 357
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFHTFMARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAQWAGLGYYA-RARNLHAAAKQCVALHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI-------IPPKHQY 192
A ILS A+ +D+++ R+ + G+A +E+ L ++ +P
Sbjct: 129 AGAILSQAWNDRFAIMDSNVKRVLTRFHGIAGYPGLPAIEKQLWQLATTHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQTDCIARR 222
>gi|294668339|ref|ZP_06733442.1| hypothetical protein NEIELOOT_00251 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309657|gb|EFE50900.1| hypothetical protein NEIELOOT_00251 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 269
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 89/231 (38%), Gaps = 9/231 (3%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M+ + S + L TP + + + + + + + + + ++ ++ Q
Sbjct: 16 MIHAPDRPSENPATALSDGLTPSFADRLIH-WQKQHGRHNLPWHSRDPYRVWLSEIMLQQ 74
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V T + A E + + +G Y ++ N+ + ++ +F
Sbjct: 75 TQVATVAGYYPRFLAAFPTVSALAAAAEDDVLALWQGLGYYS-RARNLHKAAKQIMADFG 133
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+ P L +L G+GR A + + F +D ++ R+ R+ G NK +
Sbjct: 134 GQFPTERAELEKLCGVGRSTAAAVAAFTFHKRETILDGNVKRVLCRVFAQDGDPQNKKFE 193
Query: 181 SL-----LRIIPPKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++PP++ L+ G VCK P C +C +S++C+
Sbjct: 194 HTLWTLAESLLPPQNANMPAYTQGLMDLGATVCKRSNPACPACPMSDICQA 244
>gi|66048125|ref|YP_237966.1| A/G-specific adenine glycosylase MutY [Pseudomonas syringae pv.
syringae B728a]
gi|63258832|gb|AAY39928.1| A/G-specific adenine glycosylase MutY [Pseudomonas syringae pv.
syringae B728a]
Length = 355
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ E + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVAEHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|294667548|ref|ZP_06732763.1| A/G-specific adenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602668|gb|EFF46104.1| A/G-specific adenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 357
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V
Sbjct: 10 ADAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFHTFMARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAQWAGLGYYA-RARNLHAAAKQCVALHGGQLPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI-------IPPKHQY 192
A ILS A+ +D ++ R+ + G+A +E+ L ++ +P
Sbjct: 129 AGAILSQAWNDRFAIMDGNVKRVLTRFHGIAGYPGLPAIEKQLWQLAITHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQTDCIARR 222
>gi|24380223|ref|NP_722178.1| putative A/G-specific DNA glycosylase [Streptococcus mutans UA159]
gi|24378231|gb|AAN59484.1|AE015013_3 putative A/G-specific DNA glycosylase [Streptococcus mutans UA159]
Length = 381
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWNQDKIISFRKTLLTWYNQEKRDLPWRRTKNPYCIWVSEIMLQQTQVQTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +K+ E+KL +G Y + ++ + ++ +FD K P T E + +L G
Sbjct: 71 CFPTIEKLADAPEEKLLKAWEGLGYYS-RVRHMQKAAQQVMTDFDGKFPSTYETIAQLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AF +P VD ++ R+ + K + + +I P+H
Sbjct: 130 IGPYTAGAIASIAFDLPQPAVDGNVMRVIARLFEVNYDIGEAKNRKIFQAIMKILIDPEH 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + A+ P+ I +
Sbjct: 190 PGDFNQALMDLGTDIESAKNPRPAESPIRSF 220
>gi|71409393|ref|XP_807044.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70870956|gb|EAN85193.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
K L+ + +++A++LSAQ+ D A L I TP+ + + EK L +I +G
Sbjct: 41 KAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGCTPEVIAKMPEKTLDEFISKVG 100
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDT 158
+ KK+++I + ++ ++P + E L LPGIG K A++ L A G+ IGVDT
Sbjct: 101 FHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQEADGVVLGIGVDT 160
Query: 159 HIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
H+ RIS R P KTP ++L +P K+ + LV G+ +C R P+C C
Sbjct: 161 HVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPRLPRCSEC 220
Query: 217 IISNLCK-RIKQ 227
S+LC K+
Sbjct: 221 PASDLCPNAFKE 232
>gi|325689676|gb|EGD31680.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK115]
gi|327489669|gb|EGF21460.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1058]
Length = 386
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWGADKIASFREKLLTWYDKNKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 LFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|161616075|ref|YP_001590040.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168242914|ref|ZP_02667846.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264444|ref|ZP_02686417.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194447840|ref|YP_002047099.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|161365439|gb|ABX69207.1| hypothetical protein SPAB_03876 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194406144|gb|ACF66363.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205338089|gb|EDZ24853.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205347087|gb|EDZ33718.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 350
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPAHGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|296453628|ref|YP_003660771.1| HhH-GPD family protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183059|gb|ADG99940.1| HhH-GPD family protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 318
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 36/234 (15%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWNDWMARWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + + +G R+ + + ++ E+ +++P+T + L LPGIG A+
Sbjct: 66 AAAPKADVITAWGRLGYPRRALR-LQECARVVAEEYGDELPRTYDELVALPGIGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH--------- 190
+LS AFG +DT+I R+ +R+ L R++P
Sbjct: 125 VLSFAFGERIAVIDTNIRRVLSRVFLGTESRGGAASPAERALANRMLPQDRVRGDGADCT 184
Query: 191 ------------------QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C+ C I++ C +K
Sbjct: 185 DHAYRSGEHTFLQRSEPPSATWNQSVMELGAVVCTAKTPLCEICPIADDCAFLK 238
>gi|266625855|ref|ZP_06118790.1| A/G-specific adenine glycosylase [Clostridium hathewayi DSM 13479]
gi|288862245|gb|EFC94543.1| A/G-specific adenine glycosylase [Clostridium hathewayi DSM 13479]
Length = 214
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ L + + L + + + ++ ++ Q+ V + E
Sbjct: 4 KEERLRAMEKPLLSWYKGHARILPWRENPEPYRVWISEIMLQQTRVEAVKPYFERFMEAL 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ A+ E +L +G Y ++ N+ + +++ ++ +P + E L +LPGIG
Sbjct: 64 PDTAALAAVSEDRLFKLWEGLGYYN-RARNLKKAAGVVMEQYGGVLPASWEELKKLPGIG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII----PPKHQY 192
A I S+A+GIP VD ++ R+ +R+ + + V++ + ++ P +
Sbjct: 123 SYTAGAIASIAYGIPVPAVDGNVLRVISRVTGSREDILKQSVKKQMEDLLLGVMPREGAG 182
Query: 193 NAHYWLVLHGRYVCKARK-PQCQSCIISNLC 222
N + L+ G VC P C+ C ++++C
Sbjct: 183 NYNQALIEIGAIVCVPNGEPLCRECPMASVC 213
>gi|241760280|ref|ZP_04758375.1| A/G-specific adenine glycosylase [Neisseria flavescens SK114]
gi|241319158|gb|EER55636.1| A/G-specific adenine glycosylase [Neisseria flavescens SK114]
Length = 344
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 11/208 (5%)
Query: 30 YLFSLK---WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +++ ++ ++ Q+ V T Q + A
Sbjct: 9 RRLIDWQRQHGRNNLPWQVKDPYSVWLSEIMLQQTQVATVLDYYPRFLAKFPTVQSLAAA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ ++ + +G Y ++ N+ + ++ +F P + L L G+GR A I +
Sbjct: 69 PQDEVLSLWAGLGYYS-RARNLHKAAQQVVGQFGGIFPSERKDLETLCGVGRSTAAAISA 127
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK--HQYNAHYWLV 199
AF +D ++ R+ R+ G +K + ++P + L+
Sbjct: 128 FAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLM 187
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VCK KP C C ++ +C+ KQ
Sbjct: 188 DLGATVCKRTKPLCHQCPMAEICEAKKQ 215
>gi|241762186|ref|ZP_04760268.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241373233|gb|EER62852.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 373
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 13/216 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ EI + L + + + + ++ ++ Q+T +
Sbjct: 1 MQKSAVYREITTDLLNWYQRHARILPWRTEAQQNKVDPYRVWLSEIMLQQTTTAHAAPYY 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
E T + + A E + +G Y + I + K P +GL
Sbjct: 61 LKFVERWPTVEALAAAQEADVMAEWAGLGYYSRARNLIK--CAKEVVASGGKFPDNEQGL 118
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIP 187
LPGIGR A I+++AFG + VD ++ R+ +R+ P + + ++ P
Sbjct: 119 LALPGIGRYTAAAIVAIAFGKRAVVVDANVERVVSRLFAIETPLPASRPIIAEETDKLTP 178
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G +C R+P C C + C+
Sbjct: 179 DSAAGDFAQAMMDIGATICVNRQPTCAICPMMPHCE 214
>gi|254445117|ref|ZP_05058593.1| base excision DNA repair protein, HhH-GPD family [Verrucomicrobiae
bacterium DG1235]
gi|198259425|gb|EDY83733.1| base excision DNA repair protein, HhH-GPD family [Verrucomicrobiae
bacterium DG1235]
Length = 343
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 81/213 (38%), Gaps = 10/213 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + + +L + N + +V+ + Q+ V E
Sbjct: 9 QAKSFRSSLIDWYDANARDLPWRNAPSTYKTVVSEFMLQQTQVKTVLPYFAAWLEKYPDF 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E+++ +G Y ++ N+ L+ + ++P + R PG+G
Sbjct: 69 KTLADASEEEILKSWEGLGYYS-RARNLHKLAKEVSAIPAGELPTDAKSWLRFPGVGPYA 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL------LRIIPPKHQYNA 194
A I S++F P+ VD ++ RI +RI N + + ++ P H +
Sbjct: 128 AAAICSISFSDPSAVVDGNVVRILSRITADESDYKNSTDAAKAYRELVQTLLNPAHPGDH 187
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G VC + P C C + C+ +
Sbjct: 188 NQAMMELGATVCHKQSPTCLLCPVRVHCQGYTK 220
>gi|167031329|ref|YP_001666560.1| A/G-specific adenine glycosylase [Pseudomonas putida GB-1]
gi|166857817|gb|ABY96224.1| A/G-specific adenine glycosylase [Pseudomonas putida GB-1]
Length = 355
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 81/200 (40%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + T Q + E
Sbjct: 12 DWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+++E LT LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKAAKIVVEQHGGEFPRSVEQLTELPGIGRSTAGAIASISM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P + ++ G
Sbjct: 131 GIRAPILDGNVKRVLARYSAQAGYPGEPKVANQLWATAERFTPQLRANHYTQAMMDMGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLICPLQRGCEA 210
>gi|213971190|ref|ZP_03399308.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
T1]
gi|301382318|ref|ZP_07230736.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
Max13]
gi|302058511|ref|ZP_07250052.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
K40]
gi|302132178|ref|ZP_07258168.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924059|gb|EEB57636.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. tomato
T1]
Length = 355
Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTARIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERACEA 210
>gi|56476954|ref|YP_158543.1| A/G-specific DNA glycosylase [Aromatoleum aromaticum EbN1]
gi|56312997|emb|CAI07642.1| A/G-specific DNA glycosylase [Aromatoleum aromaticum EbN1]
Length = 355
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 14/210 (6%)
Query: 31 LFSLKWPSP-KGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ +L + + + + ++ ++ Q+ V
Sbjct: 10 RLVDWHRRHGRHDLPWQHRCDGVPDPYRVWLSEIMLQQTQVDTVIPYYARFLARFPDLAA 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++ +G Y ++ N+ + + + P E + RLPGIGR A
Sbjct: 70 LAAAPVDEVLTLWSGLGYYA-RARNLHKAAQAVADFHGGNFPSRAEAIARLPGIGRSTAA 128
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYW 197
I + AFG +D ++ R+ R G VE L + +PP
Sbjct: 129 AIAAFAFGERAAILDGNVKRVLCRAFGVAGFPGQRAVEARLWALAESLLPPTDVGTYIQA 188
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC+ +P C C +++ C ++
Sbjct: 189 QMDLGATVCRRSRPACARCPLADSCVARRE 218
>gi|302858035|ref|XP_002960002.1| hypothetical protein VOLCADRAFT_101513 [Volvox carteri f.
nagariensis]
gi|300253603|gb|EFJ38933.1| hypothetical protein VOLCADRAFT_101513 [Volvox carteri f.
nagariensis]
Length = 243
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
Q TD V K LF + M +L+ ++ G +R K+ N+++LS L+
Sbjct: 30 FLVQDTDGKVTKI---LFARYPDARAMAEADPLELETILQPTGFFRAKARNVLALSTRLV 86
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+E+D +P LE L LPG+GRK ANV+L AFG+P I VDTH R++ R G P
Sbjct: 87 DEYDGVVPGRLEDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLARRFGWTASDDPV 146
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
K+E + + P+ + +V HGR VC +RKP C +C +++LC +
Sbjct: 147 KIEFDVAELFEPRDWTMLSHRVVFHGRRVCHSRKPACGACPVASLCPSYGE 197
>gi|71082819|ref|YP_265538.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71061932|gb|AAZ20935.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 326
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 35 KWPSPKGELYYVNH-------FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + K L + + +V+ + Q+ V + + + + I
Sbjct: 13 WYDNNKRSLPWRKELSQVKREYYTLVSEFMLQQTQVATVIPYFNNFIKDIPDIKSLSKIK 72
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E KL Y +G Y + +N+ + IL F+ ++P T++ L LPGIG +N I+++
Sbjct: 73 EHKLLKYWEGLGYYS-RVKNLKKTAQILEKNFNRRLPNTIDELKLLPGIGDYTSNAIMAI 131
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP-----KHQYNAHYWLVLHG 202
AF P I +D +I R+ R L K P ++ + L + L+ G
Sbjct: 132 AFNKPFIPLDGNIERVIKR--LLNLKLPKEITKDNLVKSKKILGNSTRASDYAQALMELG 189
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+C+ + P C C + CK K+
Sbjct: 190 ALICRPKNPLCYQCPLIKNCKSFKK 214
>gi|269792590|ref|YP_003317494.1| DNA-(apurinic or apyrimidinic site) lyase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100225|gb|ACZ19212.1| DNA-(apurinic or apyrimidinic site) lyase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 232
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 25 LEEIFYLFSLKWP-SPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
IF L + + L ++ +LS + DVN ++A +L + + +
Sbjct: 18 ARRIFDLLESVYGNEARLSLEPSGEPLDGLILTILSQNTNDVNRDRAYGNLRALFPSWES 77
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN---------EFDNKIPQTLEGLTRL 133
++ + L+ IR G+ K+ I + + + + + L+ L
Sbjct: 78 VMEAPVEDLEGAIRVAGLGASKARRIKEVLYKVKETLGTLSLGAMRSWRRDEVEAFLSTL 137
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQY 192
PG+G K +L GIP VDTH+ R+S R+GLAPG P +++ L +I P+
Sbjct: 138 PGVGPKTVACVLVFDLGIPAFPVDTHVGRLSVRMGLAPGGMKPWEIQLRLESLIDPERYL 197
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
AH L+ HGR +CKA++P+C C + C
Sbjct: 198 GAHVNLIFHGRRICKAQRPRCGDCPLLGTC 227
>gi|225010183|ref|ZP_03700655.1| A/G-specific adenine glycosylase [Flavobacteria bacterium MS024-3C]
gi|225005662|gb|EEG43612.1| A/G-specific adenine glycosylase [Flavobacteria bacterium MS024-3C]
Length = 350
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 84/210 (40%), Gaps = 15/210 (7%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+EI + + + K L + + + + ++ ++ Q+ + T
Sbjct: 5 QEIIH----WYQANKRSLPWRETKDPYHIWLSEIILQQTRVAQGTPYYVKFTDAFPTVFD 60
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A E+++ + +G Y ++ N+ + + ++NE + P + L +L G+G A+
Sbjct: 61 LAAAPEEQVLKLWQGLGYYS-RARNLHAAAQYVVNELNGVFPANYKALLQLKGVGDYTAS 119
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE------QSLLRIIPPKHQYNAHY 196
I S+ F P +D +++R+ +R N E L + + + +
Sbjct: 120 AIASICFNSPEAVLDGNVYRVLSRY-FGIDVPVNTTEGARLFKAIALDQLDLANPSDYNQ 178
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G C + C SC + + C +
Sbjct: 179 AIMEFGALQCTPKLTDCPSCPLQSTCVAYR 208
>gi|153802591|ref|ZP_01957177.1| A/G-specific adenine glycosylase [Vibrio cholerae MZO-3]
gi|124121854|gb|EAY40597.1| A/G-specific adenine glycosylase [Vibrio cholerae MZO-3]
Length = 353
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++NE+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQTVVNEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|283456631|ref|YP_003361195.1| A/G-specific adenine DNA glycosylase [Bifidobacterium dentium Bd1]
gi|283103265|gb|ADB10371.1| A/G-specific adenine DNA glycosylase [Bifidobacterium dentium Bd1]
Length = 299
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + W +L + + ++V+ ++S Q+ V + E +
Sbjct: 2 VAESLAEWWHESARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWQAWMERWPDAAAL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + ++ +++ + +P+T + L LPGIG A+
Sbjct: 62 ADASKADVITAWGRLGYPRRALR-LQECARMVADDYHDDLPRTYDELVALPGIGDYTASA 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLLRIIPPKHQYN------- 193
++S A+G +DT+I R+ +R+ L + G + E++L + P+
Sbjct: 121 VMSFAYGERIAVIDTNIRRVLSRVFLGAESRGGAASPAERALANRVLPEDSAARCRGFDR 180
Query: 194 ----AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G +C A+ P C+ C ++ C
Sbjct: 181 PSVVWNQSVMELGAVICTAKSPLCEQCPVAAEC 213
>gi|326576141|gb|EGE26056.1| A/G-specific adenine glycosylase [Moraxella catarrhalis CO72]
Length = 410
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 80/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G T ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVFGDVTKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|308175914|ref|YP_003915320.1| A/G-specific DNA glycosylase [Arthrobacter arilaitensis Re117]
gi|307743377|emb|CBT74349.1| putative A/G-specific DNA glycosylase [Arthrobacter arilaitensis
Re117]
Length = 302
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++I + + +L + + ++V+ + Q+ V V + P
Sbjct: 1 MQQIHNSINRWYSRNARDLPWRRPGVSGWEVMVSEFMLQQTPVVRVLPVYEEWMRRWPRP 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + A + +G R+ + + + + E++ ++P+T L LPGIG
Sbjct: 61 QDLAAEPLSEALKAWGRLGYPRRAQR-LHAAAVEITTEYNGEVPRTEAELLSLPGIGDYT 119
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNR---IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
A I AFG T+ VDT+I R+ R P TP E + R + P+ A+ W
Sbjct: 120 AAAIACFAFGERTVVVDTNIRRVHARLFGGMALPEPTPRASEFARAREVQPEEHQIANMW 179
Query: 198 ---LVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC AR P+C+ C + C
Sbjct: 180 NISVMELGALVCTARSPKCEQCPVFEQC 207
>gi|194444686|ref|YP_002042370.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194403349|gb|ACF63571.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 350
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|324991126|gb|EGC23060.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK353]
Length = 386
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWQADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTAFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + + +L +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQTMMLILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|260173654|ref|ZP_05760066.1| A/G-specific adenine glycosylase [Bacteroides sp. D2]
gi|315921916|ref|ZP_07918156.1| A/G-specific adenine glycosylase [Bacteroides sp. D2]
gi|313695791|gb|EFS32626.1| A/G-specific adenine glycosylase [Bacteroides sp. D2]
Length = 344
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 13/211 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ E + K EL + + + + ++ ++ Q+ + Q
Sbjct: 1 MNEFTKTIVEWYEENKRELPWRESADPYLIWISEIILQQTRVAQGYDYFLRFIKRFPDVQ 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ Y + +G Y + + + P+T + L G+G A
Sbjct: 61 TLAAADEDEVMKYWQGLGYYSRARNLHAAAKS-----MNGVFPKTYPEVLALKGVGGYTA 115
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI----IPPKHQYNAHY 196
I S A+G+P VD +++R+ +R + + ++ + + KH +
Sbjct: 116 AAICSFAYGMPYAVVDGNVYRVLSRYFGIDTPIDSTEGKKLFAALADEMLDKKHPAVYNQ 175
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G C + C C ++ C + +
Sbjct: 176 GIMDFGAIQCTPQSSNCLFCPLAGGCSALSK 206
>gi|192360375|ref|YP_001981053.1| A / G specific adenine glycosylase [Cellvibrio japonicus Ueda107]
gi|190686540|gb|ACE84218.1| A / G specific adenine glycosylase [Cellvibrio japonicus Ueda107]
Length = 371
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 80/205 (39%), Gaps = 12/205 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ I F + L + + + ++ ++ Q+ V + Q
Sbjct: 10 KAILAWFDRH---GRKHLPWQQGITPYRVWLSEIMLQQTQVTTVIPYFERFVARFPDVQS 66
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++ + +G Y ++ N+ + +++++ + P T+ L LPGIGR A
Sbjct: 67 LAAAPIDEVLHLWTGLGYYA-RARNLHRCAQTVVSQYGGEFPGTVAELADLPGIGRSTAG 125
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYW 197
I+S+AFG +D ++ R+ R G + + + P +
Sbjct: 126 AIVSIAFGKRAAILDGNVKRVLARYHAVEGWPGQTDVLSTLWEIAETYTPKTRANHYTQA 185
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C KP+C+ C + C
Sbjct: 186 MMDMGATLCTRSKPRCELCPVREGC 210
>gi|297563909|ref|YP_003682882.1| HhH-GPD family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848358|gb|ADH70376.1| HhH-GPD family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 291
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 77/202 (38%), Gaps = 17/202 (8%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ S +L + + ++++V+ ++ Q+ V V A E TP +
Sbjct: 12 AWYESHARDLPWRRPDASPWSILVSEIMLQQTPVVRVLPAWNAWMERWPTPADLAREPSG 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + + E ++P+ L LPG+G A + S AF
Sbjct: 72 EAVRMWNRLGYPRRALR-LHACAVAITEEHGGRVPEDHATLLSLPGVGSYTAAAVASFAF 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIP-----PKHQYNAHYWLVL 200
G +DT++ R+ R P ++ ++P ++
Sbjct: 131 GQRHAILDTNVRRVLARAETGVQYPPKTQTKAETALAESLLPSAPSVAARWGV---AVME 187
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G VC AR P C C I++ C
Sbjct: 188 LGALVCTARTPACADCPIAHQC 209
>gi|225075785|ref|ZP_03718984.1| hypothetical protein NEIFLAOT_00801 [Neisseria flavescens
NRL30031/H210]
gi|224952867|gb|EEG34076.1| hypothetical protein NEIFLAOT_00801 [Neisseria flavescens
NRL30031/H210]
Length = 344
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
+ +++ ++ ++ Q+ V E T Q + A + ++ + +G Y
Sbjct: 24 PWQVKDPYSVWLSEIMLQQTQVAAVLDYYPRFLEKFPTVQALAAAPQDEVLSLWAGLGYY 83
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
++ N+ + ++ +F P + L L G+GR A I + AF +D ++
Sbjct: 84 S-RARNLHKAAQQVVGQFGGTFPSERKDLETLCGVGRSTAAAISAFAFNRRETILDGNVK 142
Query: 162 RISNRIGLAPGKTPNKVEQSL-----LRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQ 214
R+ R+ G +K ++ ++P + L+ G VCK KP C
Sbjct: 143 RVLCRVFARDGNPQDKKFENSLWVLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCH 202
Query: 215 SCIISNLCKRIKQ 227
C ++++C+ KQ
Sbjct: 203 QCPMADICEAKKQ 215
>gi|329122707|ref|ZP_08251285.1| A/G-specific adenine glycosylase [Haemophilus aegyptius ATCC 11116]
gi|327472581|gb|EGF18011.1| A/G-specific adenine glycosylase [Haemophilus aegyptius ATCC 11116]
Length = 378
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +EF+ P E + L G+GR A ILS P +D ++ R+
Sbjct: 92 RNLHKAAQKVRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L + P + + ++ G VC KP+C C ++
Sbjct: 152 RYFAIEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCMRTKPKCDLCPLNI 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLAYK 217
>gi|72163274|ref|YP_290931.1| HhH-GPD:Iron-sulfur cluster loop [Thermobifida fusca YX]
gi|71917006|gb|AAZ56908.1| HhH-GPD:Iron-sulfur cluster loop [Thermobifida fusca YX]
Length = 291
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 80/202 (39%), Gaps = 17/202 (8%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ ++ Q+ V A + E TP+ + A
Sbjct: 12 AWYDANARDLPWRSAEVTPWGVLVSEVMLQQTPVARVLPAWQAWMERWPTPKDLAADSAG 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +++ +P + + L LPG+G A + S AF
Sbjct: 72 EAVRMWGRLGYPRRALR-LHACATVIVERHGGTVPDSYDELLALPGVGAYTAAAVASFAF 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN---KVE-QSLLRIIPPK-----HQYNAHYWLVL 200
+DT++ R+ R+ P K E + ++P + ++
Sbjct: 131 QQRHAVLDTNVRRVLERLVNGRQYPPRTPTKAEYRLAESLLPEEPAVAARWGV---AVME 187
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C + + C
Sbjct: 188 LGALVCTARSPRCGVCPVVDQC 209
>gi|237802203|ref|ZP_04590664.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025060|gb|EGI05116.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 247
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHEGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|16761886|ref|NP_457503.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143373|ref|NP_806715.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213425494|ref|ZP_03358244.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213609558|ref|ZP_03369384.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213646177|ref|ZP_03376230.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213850187|ref|ZP_03381085.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825380|ref|ZP_06544624.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25292161|pir||AG0879 A/G-specific adenine glycosylase STY3265 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504188|emb|CAD02935.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139007|gb|AAO70575.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 350
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|158312221|ref|YP_001504729.1| HhH-GPD family protein [Frankia sp. EAN1pec]
gi|158107626|gb|ABW09823.1| HhH-GPD family protein [Frankia sp. EAN1pec]
Length = 303
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 15/217 (6%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATK 71
+ + + + +E+ + +L + + ++V+ ++ Q+ V
Sbjct: 10 IPAMTSVRMADEVL----EWFAVCARDLPWRRPETTPWGVLVSEIMLQQTPVNRVLPVWA 65
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
P + A + +G R+ + + +L +P L+ L
Sbjct: 66 EWLSRWPAPADLAAEPSGEAVRAWGRLGYPRRALRLHQAATAML-ERHGGAVPDELDDLL 124
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII----- 186
LPG+G A + + AF +D ++ R+ R + P V + L ++
Sbjct: 125 ALPGVGSYTARAVAAFAFRQRHAVIDVNVRRLVARAVEGVAEGPTSVSRRDLALVADLLP 184
Query: 187 -PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
P+ A + G VC AR P+C +C + + C
Sbjct: 185 ADPETAARASAAFMELGALVCVARAPRCAACPVRDRC 221
>gi|113461803|ref|YP_719872.1| A/G-specific DNA-adenine glycosylase [Haemophilus somnus 129PT]
gi|112823846|gb|ABI25935.1| A/G-specific DNA-adenine glycosylase [Haemophilus somnus 129PT]
Length = 370
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + ++ + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKVFPNITALANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P + + LPGIGR A +LS P +D ++ R+
Sbjct: 92 RNLHRAAQTIRDQYQGEFPTDFQHVWALPGIGRSTAGAVLSSVLNQPYPILDGNVKRVLT 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G T KVE L ++ P + + + ++ G VC KP+C C ++
Sbjct: 152 RYFQVQGWTGDKKVEDKLWQLSAEVTPTEQVADFNQAMMDLGAMVCTRTKPKCLLCPLAI 211
Query: 221 LC 222
C
Sbjct: 212 KC 213
>gi|15640479|ref|NP_230106.1| A/G-specific adenine glycosylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121728580|ref|ZP_01681601.1| A/G-specific adenine glycosylase [Vibrio cholerae V52]
gi|153819148|ref|ZP_01971815.1| A/G-specific adenine glycosylase [Vibrio cholerae NCTC 8457]
gi|153823186|ref|ZP_01975853.1| A/G-specific adenine glycosylase [Vibrio cholerae B33]
gi|227080662|ref|YP_002809213.1| A/G-specific adenine glycosylase [Vibrio cholerae M66-2]
gi|255744301|ref|ZP_05418254.1| A/G-specific adenine glycosylase [Vibrio cholera CIRS 101]
gi|262147274|ref|ZP_06028073.1| A/G-specific adenine glycosylase [Vibrio cholerae INDRE 91/1]
gi|298501017|ref|ZP_07010818.1| A/G-specific adenine glycosylase [Vibrio cholerae MAK 757]
gi|9654877|gb|AAF93625.1| A/G-specific adenine glycosylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121629136|gb|EAX61579.1| A/G-specific adenine glycosylase [Vibrio cholerae V52]
gi|126510293|gb|EAZ72887.1| A/G-specific adenine glycosylase [Vibrio cholerae NCTC 8457]
gi|126519312|gb|EAZ76535.1| A/G-specific adenine glycosylase [Vibrio cholerae B33]
gi|227008550|gb|ACP04762.1| A/G-specific adenine glycosylase [Vibrio cholerae M66-2]
gi|255738241|gb|EET93633.1| A/G-specific adenine glycosylase [Vibrio cholera CIRS 101]
gi|262031268|gb|EEY49883.1| A/G-specific adenine glycosylase [Vibrio cholerae INDRE 91/1]
gi|297540265|gb|EFH76325.1| A/G-specific adenine glycosylase [Vibrio cholerae MAK 757]
Length = 353
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|121590724|ref|ZP_01678056.1| A/G-specific adenine glycosylase [Vibrio cholerae 2740-80]
gi|153828386|ref|ZP_01981053.1| A/G-specific adenine glycosylase [Vibrio cholerae 623-39]
gi|254291162|ref|ZP_04961958.1| A/G-specific adenine glycosylase [Vibrio cholerae AM-19226]
gi|121547455|gb|EAX57564.1| A/G-specific adenine glycosylase [Vibrio cholerae 2740-80]
gi|148876095|gb|EDL74230.1| A/G-specific adenine glycosylase [Vibrio cholerae 623-39]
gi|150422856|gb|EDN14807.1| A/G-specific adenine glycosylase [Vibrio cholerae AM-19226]
Length = 353
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|111021420|ref|YP_704392.1| A/G-specific adenine DNA glycosylase [Rhodococcus jostii RHA1]
gi|110820950|gb|ABG96234.1| probable A/G-specific adenine DNA glycosylase [Rhodococcus jostii
RHA1]
Length = 326
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 11/199 (5%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ +L + + ++++ ++ Q+ V V + P +M A
Sbjct: 40 AALINWYDVQARDLPWRRDGVTAWHILMSEIMLQQTPVVRVAPIWEEWVRRWPVPSRMAA 99
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + +G R+ + + +L E + +P ++ L LPGIG A +
Sbjct: 100 SSQADVLRAWGKLGYPRRALR-LHECAGVLAAEHGDVVPSDVDTLLGLPGIGAYTARAVA 158
Query: 146 SMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVE--QSLLRIIPPKHQYN--AHYWLV 199
A+G VDT++ R+ R A P+ + ++P L+
Sbjct: 159 CFAYGQRVPVVDTNVRRVVARAVHGSAEPGNPSTTRDLADVSALLPRTRARAATFSAALM 218
Query: 200 LHGRYVCKARKPQCQSCII 218
G VC AR P+C C +
Sbjct: 219 ELGATVCTARSPECARCPL 237
>gi|312281367|ref|YP_004022730.1| HhH-GPD family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181896|gb|ADQ42065.1| HhH-GPD family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 223
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L W K + + N + +++A +L ++T V + + + + ++
Sbjct: 11 LLLKWWEENKRDFPWRHTNNPYHVLIAEMLLRKTTAQQVAQVYTEFIQKYPSSKVLMNAN 70
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E +L ++ +G+ +++ + L+ + E+ IP + L +LPG+G+ AN +LS+
Sbjct: 71 EDELVKILKPLGMELVRAKLLKKLALAIEKEWKGIIPSQQKDLLKLPGVGKYTANAVLSL 130
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHG 202
+ VDT+ R+ R+ + + +IP + N + ++
Sbjct: 131 IYLEDVPLVDTNFIRVIERVFNVKSSKSRAREDPSIWKFAYELIPKGNSRNFNLAVLDFA 190
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+CKA+KPQC C + +C +
Sbjct: 191 ALICKAKKPQCSICPLITICIYYHK 215
>gi|289164189|ref|YP_003454327.1| A/G-specific adenine glycosylase [Legionella longbeachae NSW150]
gi|288857362|emb|CBJ11190.1| putative A/G-specific adenine glycosylase [Legionella longbeachae
NSW150]
Length = 357
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 83/217 (38%), Gaps = 11/217 (5%)
Query: 20 YTPKELEEIFYL-FSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++L E F L + + L + + + V+ ++ Q+ V +
Sbjct: 1 MKKQKLHEQFSKPLLLWFDLHGRKNLPWQHPRTPYRVWVSEIMLQQTQVQTVIPYFERFM 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + E + + +G Y ++ N+ + +++ P + L LP
Sbjct: 61 QRFPNISDLAHAQEDDVLSLWSGLGYYS-RARNLHQTAKLILQHHQGIFPNDSKLLNELP 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI----IPPK 189
GIG + ILS AF P +D ++ R+ + + ++V++ L + +P +
Sbjct: 120 GIGPSTSAAILSQAFNKPAAILDGNVKRVLTRFFRITGYPEQSQVKKKLWELADLCMPQE 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G C + P C SC + C K
Sbjct: 180 NCADYTQAIMDLGATCCITKNPHCSSCPLHINCLAFK 216
>gi|121603814|ref|YP_981143.1| A/G-specific adenine glycosylase [Polaromonas naphthalenivorans
CJ2]
gi|120592783|gb|ABM36222.1| A/G-specific DNA-adenine glycosylase [Polaromonas naphthalenivorans
CJ2]
Length = 384
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 10/208 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
EI + + + + ++ ++ Q+ V + T +
Sbjct: 28 ANEIVRWQQSHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLAYYDRFVQRFPTVSDLA 87
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A + ++ +G Y ++ N+ + ++ + P++ E L LPGIGR A I
Sbjct: 88 AATQDEVMALWGGLGYYS-RARNLHRCAQDVMALHAGQFPRSAEQLQTLPGIGRSTAAAI 146
Query: 145 LSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYN----AH 195
S F +D ++ R+ R LA + ++P +
Sbjct: 147 ASFCFAERVAILDGNVKRVLTRVLGFSDDLAQSANERALWNQATDLLPHDNLARAMPRYT 206
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G +C R+P+C C + LC+
Sbjct: 207 QGLMDLGATICTGRQPKCLLCPVQALCR 234
>gi|300114678|ref|YP_003761253.1| A/G-specific adenine glycosylase [Nitrosococcus watsonii C-113]
gi|299540615|gb|ADJ28932.1| A/G-specific adenine glycosylase [Nitrosococcus watsonii C-113]
Length = 354
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 9/193 (4%)
Query: 40 KGELYYV-NH--FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + N + + ++ ++ Q+ V + + + ++
Sbjct: 19 RKDLPWQQNPTLYRIWISEIMLQQTQVATVIPYYQRFIKRFPDLPALACASVDEVLGLWT 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ + + I+ + K+P TLE L LPGIGR +L++A +
Sbjct: 79 GLGYYA-RARRLHQAARIVWETHEGKLPTTLEALMELPGIGRSTGGAMLALALDQRHPIL 137
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R KVE+ L + ++P + ++ G VC +P
Sbjct: 138 DGNVKRVLIRQEAIEHWPGQPKVEKQLWQRATTLLPQTRLADYTQAIMDLGATVCTRYRP 197
Query: 212 QCQSCIISNLCKR 224
+C SC + C+
Sbjct: 198 RCPSCPVKETCQA 210
>gi|161506339|ref|YP_001573451.1| adenine DNA glycosylase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160867686|gb|ABX24309.1| hypothetical protein SARI_04536 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 350
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFLARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPGIGR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGIGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|330874227|gb|EGH08376.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 355
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERACQA 210
>gi|312219432|emb|CBX99376.1| hypothetical protein [Leptosphaeria maculans]
Length = 595
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V ++ T Q + + + + + +G Y + +
Sbjct: 134 RRAYEVWVSEVMLQQTRVSTVIPYFQNWLSKWPTVQDLANANHEDVLSVWKGLGYYSRAT 193
Query: 106 ENII--SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
IP GL +PGIGR A I S+AFG +D ++ R+
Sbjct: 194 RLHQGAKAIVTKSAGSSCPIPSNATGLQEIPGIGRYTAGAISSIAFGQAEPVLDGNVARV 253
Query: 164 SNRIGLAPGKTPNKVEQSLL-----RII-------PPKHQYNAHYWLVLHGRYVCKARKP 211
+R +K LL ++I P + + ++ G +C R P
Sbjct: 254 LSRQLGLYMDAKDKKSTDLLWDTAGQLIRSVSGPQPSRIPGQWNQAMMELGSTICTPR-P 312
Query: 212 QCQSCIISNLCKRIKQ 227
+C C I + C+ +
Sbjct: 313 RCDECPIQSTCRAYNE 328
>gi|56415048|ref|YP_152123.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181621|ref|YP_218038.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|168236178|ref|ZP_02661236.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194737851|ref|YP_002116058.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197363977|ref|YP_002143614.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|200388239|ref|ZP_03214851.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|224584904|ref|YP_002638703.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|56129305|gb|AAV78811.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129254|gb|AAX66957.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194713353|gb|ACF92574.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197095454|emb|CAR61013.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197290729|gb|EDY30083.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199605337|gb|EDZ03882.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|224469432|gb|ACN47262.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|322716104|gb|EFZ07675.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|168234339|ref|ZP_02659397.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194471222|ref|ZP_03077206.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194457586|gb|EDX46425.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331718|gb|EDZ18482.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 350
Score = 98.8 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMTRFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|312883840|ref|ZP_07743557.1| A/G-specific adenine glycosylase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368298|gb|EFP95833.1| A/G-specific adenine glycosylase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 358
Score = 98.8 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+++ ++ ++ Q+ V + + T + + ++ + +G Y ++
Sbjct: 26 KTAYSVWLSEIMLQQTQVATVIPYYERFLQRFPTVVDLANAQQDEVLHLWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ +++ + P +E + LPG+GR A ILS F P +D ++ R
Sbjct: 85 RNLHKAAQIVAHQYQGQFPLNIEDMNALPGVGRSTAAAILSSVFKQPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G KVE L P + + ++ G VC KP+C C I +
Sbjct: 145 RSFAVAGWPGQKKVENQLWAHAEEHTPSNNVDKYNQAMMDMGAMVCTRSKPKCGLCPIES 204
Query: 221 LCKRIKQ 227
+C +Q
Sbjct: 205 MCIANQQ 211
>gi|126662501|ref|ZP_01733500.1| putative A/G-specific adenine glycosylase [Flavobacteria bacterium
BAL38]
gi|126625880|gb|EAZ96569.1| putative A/G-specific adenine glycosylase [Flavobacteria bacterium
BAL38]
Length = 349
Score = 98.8 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 83/211 (39%), Gaps = 11/211 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E + K +L + N + + ++ ++ Q+ T +
Sbjct: 2 EFSNSLINWYLQNKRDLPWRNTDNPYLIWLSEIMLQQTRVAQGLPYFLTFTTTFPTVFDL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E+++ + +G Y ++ N+ + + + E + K P + L +L G+G A
Sbjct: 62 ANAKEEQVLKLWQGLGYYS-RARNLHATAKYIAFELNGKFPSNYKELLKLKGVGEYTAAA 120
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
I S ++ P +D ++FR+ +R ++ KT + +Q ++ + + +
Sbjct: 121 IASFSYNEPVAVLDGNVFRVLSRYFNLDSDISLPKTKTEFQQLAQEVLNKNNPALFNQAI 180
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR--IKQ 227
+ G C + P C SC ++ C K+
Sbjct: 181 MEFGALQCVPKNPNCTSCDLNTSCAALQYKK 211
>gi|327483305|gb|AEA77712.1| A/G-specific adenine glycosylase [Vibrio cholerae LMA3894-4]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|325335520|gb|ADZ11794.1| A/G-specific DNA glycosylase [Riemerella anatipestifer RA-GD]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 81/205 (39%), Gaps = 10/205 (4%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
F + + +L + N + + + ++ Q+ + + + +
Sbjct: 22 FRIL-QWYKQNARDLPWRATKNPYNIWICEIILQQTQVQQGLQHYLNFIARFPDVKSLAE 80
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y + +G Y + N+ + ++ +F P + + +L GIG+ A I
Sbjct: 81 ADTDEVLLYWKGLGYYSRAI-NLQYAARQIMQDFGGTFPTNHKDILKLKGIGKYTAAAIC 139
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+++ +P +D + +R+ +R ++ + + IP + + + ++
Sbjct: 140 SISYQLPYPAIDGNFYRVFSRFFADDFDISKSNAFDYFSELTKDFIPKDNPGDFNQAIMD 199
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G +CK ++P C C ++ C
Sbjct: 200 LGSGICKPKQPSCGFCPLNKDCIAF 224
>gi|270157418|ref|ZP_06186075.1| A/G-specific adenine glycosylase [Legionella longbeachae D-4968]
gi|269989443|gb|EEZ95697.1| A/G-specific adenine glycosylase [Legionella longbeachae D-4968]
Length = 357
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 83/217 (38%), Gaps = 11/217 (5%)
Query: 20 YTPKELEEIFYL-FSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++L E F L + + L + + + V+ ++ Q+ V +
Sbjct: 1 MKKQKLHEQFSKPLLLWFDLHGRKNLPWQHPRTPYRVWVSEIMLQQTQVQTVIPYFERFM 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + E + + +G Y ++ N+ + +++ P + L LP
Sbjct: 61 QRFPNISDLAHAQEDDVLSLWSGLGYYS-RARNLHQTAKLILQHHQGIFPNDSKLLNELP 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI----IPPK 189
GIG + ILS AF P +D ++ R+ + + ++V++ L + +P +
Sbjct: 120 GIGPSTSAAILSQAFNKPAAILDGNVKRVLTRFFRITGYPEQSQVKKKLWELADLCMPQE 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G C + P C SC + C K
Sbjct: 180 NCADYTQAIMDLGATCCITKNPHCSSCPLHINCLAFK 216
>gi|254226319|ref|ZP_04919910.1| A/G-specific adenine glycosylase [Vibrio cholerae V51]
gi|125621181|gb|EAZ49524.1| A/G-specific adenine glycosylase [Vibrio cholerae V51]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|325694476|gb|EGD36385.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK150]
Length = 386
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEANKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDNPVKEF 220
>gi|37525137|ref|NP_928481.1| adenine DNA glycosylase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36784563|emb|CAE13463.1| A/G-specific adenine glycosylase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 345
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 7/212 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
K+ + + ++ + + ++ ++ Q+ V +
Sbjct: 1 MEAKQFSTVVLDWYHRYGRKTLPWQLEKTSYHVWLSEVMLQQTQVATVIPYFQRFISRFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A ++ + +G Y ++ N+ + ++ K P T E + LPG+GR
Sbjct: 61 DITSLAAAPLDEVLHLWTGLGYYA-RARNLHKAAQQVVERHQGKFPTTFEDVVALPGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A ILS++ G +D ++ R+ R G K + Q + P +
Sbjct: 120 STAGAILSLSQGKHFPILDGNVKRVLARCYAVEGWPGKKEVESCLWQISTNVTPAQEVEY 179
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 180 FNQAMMDLGAMVCTRSKPKCEICPLNQGCIAY 211
>gi|254455318|ref|ZP_05068747.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082320|gb|EDZ59746.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 326
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNH-------FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
I + + K L + + +V+ + Q+ V + +
Sbjct: 2 IAKKILNWYDNNKRSLPWRRKCSSKQKEYFTLVSEFMLQQTQVTTVIPYFNNFIKNIPNF 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + E L + +G Y +++N+ + ++I+++D ++P + L +LPG+G
Sbjct: 62 EALAKVNETTLLRCWQGLGYYS-RAKNLKKSARLIIDKYDGRLPDNYDELIKLPGVGDYT 120
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAHYW 197
A+ I ++AF I +D +I R+ RI + K E + +
Sbjct: 121 ASAISAIAFNQQIIPLDGNIERLLKRILNLKTEKEIKKEYLHKEKKVFGQTSRSNDYVQA 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK + P C C I+ C K+
Sbjct: 181 LMEIGALLCKPKNPNCDKCPITKYCLSFKR 210
>gi|153826576|ref|ZP_01979243.1| A/G-specific adenine glycosylase [Vibrio cholerae MZO-2]
gi|149739668|gb|EDM53882.1| A/G-specific adenine glycosylase [Vibrio cholerae MZO-2]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ K P LE + LPG+GR A +LS F P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGKFPTDLEQMNALPGVGRSTAAAVLSSVFKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|88855370|ref|ZP_01130034.1| adenine glycosylase [marine actinobacterium PHSC20C1]
gi|88815277|gb|EAR25135.1| adenine glycosylase [marine actinobacterium PHSC20C1]
Length = 297
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 11/202 (5%)
Query: 33 SLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ +L + + + ++V+ ++ Q+ V + + TP + A
Sbjct: 18 REWFNEHGRDLPWRHDGFGAWGILVSEIMLQQTPVARVIPRLEQWLDRWPTPAALAADSP 77
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ N+ + + + D +P+ ++ L LPGIG A + + A
Sbjct: 78 GEAVRAWERLGYPRRAL-NLHAAATAITKNHDGTVPEDVQSLLALPGIGDYTARAVAAFA 136
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQS--LLRIIPPKHQYNA---HYWLVLHG 202
+G VDT++ R+ R G+ P + + ++ P+ A + ++ G
Sbjct: 137 YGHRHPVVDTNVRRVIARAVAGQGEAGPPSTRRDLAAMELLLPEDPVAAQLTNAAVMELG 196
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
VC A++P C C + LC+
Sbjct: 197 AIVCTAKRPLCDECPVRELCQW 218
>gi|319790239|ref|YP_004151872.1| iron-sulfur cluster loop protein [Thermovibrio ammonificans HB-1]
gi|317114741|gb|ADU97231.1| iron-sulfur cluster loop protein [Thermovibrio ammonificans HB-1]
Length = 214
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQ 81
++ +EI +P P V +LS +TD+N ++ + L
Sbjct: 6 EKAKEIHKRLKELFPEPHRP--NRTPLEQAVFTVLSQNTTDLNASRCLERLKRATGGKLL 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN----KIPQTLEGLTRLPGIG 137
++ + +L IR G++++K + L + + ++ LT LP IG
Sbjct: 64 EIPQLTTDELVEAIRPCGMFKQKERALRELVSRWPRLEEKLRELPPEEGIKLLTELPYIG 123
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A VIL+ FG T +DTH ++ +R+G+ G + ++ + + + HY
Sbjct: 124 PKTARVILTFGFGKNTFPIDTHCKKVLSRLGIFPKGWSTEEISRFFEKHFSARFNRELHY 183
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ GR VCKARKP+C+ C + NLC ++
Sbjct: 184 NLIRLGRRVCKARKPECERCPLRNLCSYRRR 214
>gi|168819857|ref|ZP_02831857.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205343275|gb|EDZ30039.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320087545|emb|CBY97309.1| adenine glycosylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 350
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPAHGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|237749459|ref|ZP_04579939.1| A/G-specific adenine glycosylase [Oxalobacter formigenes OXCC13]
gi|229380821|gb|EEO30912.1| A/G-specific adenine glycosylase [Oxalobacter formigenes OXCC13]
Length = 377
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 77/196 (39%), Gaps = 9/196 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E + ++++ +Y
Sbjct: 32 RHSLPWQNTRNAYRIWLSEIMLQQTQVATVIPYYLRFLERFPDVSALAYAEQEEVMSYWS 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E+ P L LPGIG+ A I + G+ +
Sbjct: 92 GLGYYS-RARNLHRCAQIIVEEYKGIFPSDPVLLEDLPGIGKSTAAAIAVFSSGVRAAIL 150
Query: 157 DTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ +RI + K K+ Q ++P L+ G VC +P
Sbjct: 151 DGNVVRVFSRIFGIAEQASDKKAKEKLWQLAYELLPESDLEAYTQGLMDLGATVCVRSRP 210
Query: 212 QCQSCIISNLCKRIKQ 227
C C S C + +
Sbjct: 211 DCSICPFSTSCIALAE 226
>gi|332535480|ref|ZP_08411261.1| A/G-specific adenine glycosylase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035090|gb|EGI71605.1| A/G-specific adenine glycosylase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ + V + + + E + ++ +G Y ++
Sbjct: 34 KTPYKVWVSEVMLQQTQVITVIPYFEKFMQSFPDIIALADADEDLVLHHWTGLGYYA-RA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ +++ + P+TL + LPGIGR A +LS++ G +D ++ R+
Sbjct: 93 RNLHKTAKIVRDKYQGEFPKTLNEVMDLPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLA 152
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + G KVE L ++ P + + ++ G VC + C++C +++
Sbjct: 153 RYFMIEGWYGVKKVENQLWHLSEQLTPKDNVTEFNQAMMDLGSSVCSRSRFDCEACPLNS 212
Query: 221 LCKRI 225
C
Sbjct: 213 GCGAF 217
>gi|197251051|ref|YP_002148025.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197214754|gb|ACH52151.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 350
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|119964372|ref|YP_946005.1| A/G-specific adenine glycosylase [Arthrobacter aurescens TC1]
gi|119951231|gb|ABM10142.1| putative A/G-specific adenine glycosylase [Arthrobacter aurescens
TC1]
Length = 316
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + L + + + ++V+ ++ Q+ V V + E TP +
Sbjct: 12 LHQALDQWFARTARNLPWREPDCSPWGILVSEVMLQQTPVVRVLPVWRDWMERWPTPAHL 71
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G R+ + + + + + K+P T L LPG+G A
Sbjct: 72 ADEPSGAAVRHWGRLGYPRRALR-LHAAAVAIREQHGGKVPDTYPELLGLPGVGNYTAAA 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI------IPPKHQYNAHYW 197
+ + AFG VDT+I R+ R+ + +R+ + + +
Sbjct: 131 VAAFAFGRRETVVDTNIRRVHARLISGDALPAPALTAGEMRLADALLPLDKELSVRWNAS 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC AR P+C C + + C
Sbjct: 191 VMELGAMVCTARSPKCADCPVRSSC 215
>gi|297580591|ref|ZP_06942517.1| A/G-specific adenine glycosylase [Vibrio cholerae RC385]
gi|297535007|gb|EFH73842.1| A/G-specific adenine glycosylase [Vibrio cholerae RC385]
Length = 353
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++N++ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQTVVNQYGGEFPTDLELMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|307196709|gb|EFN78168.1| Endonuclease III-like protein 1 [Harpegnathos saltator]
Length = 368
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +VA++LS+Q+ D + A + L P + + L I +G +++K E I
Sbjct: 180 YQSLVALMLSSQTKDQVTHAAMQRLNIYGCKPDIIAETPDDVLGKLIYPVGFWKRKVEYI 239
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL+N+++ IP+T++ L LPG+G K A++ + +A+G + VDTH+ RISNR+
Sbjct: 240 KKTSVILLNKYNGDIPRTIKELCDLPGVGPKMAHICMQIAWGEVSGIGVDTHVHRISNRL 299
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + L +P ++ LV G+ +C R P+C C+ ++C
Sbjct: 300 EWVRKQTKTPEETRNELEDWLPKPLWSEVNHLLVGFGQEICLPRFPKCSECLNKDICPYD 359
Query: 226 KQ 227
++
Sbjct: 360 RK 361
>gi|213405399|ref|XP_002173471.1| A/G-specific adenine DNA glycosylase [Schizosaccharomyces japonicus
yFS275]
gi|212001518|gb|EEB07178.1| A/G-specific adenine DNA glycosylase [Schizosaccharomyces japonicus
yFS275]
Length = 470
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 27/236 (11%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV----------NH-----------FTLIVAVLL 57
L + E++ + + K L + + + ++V+ ++
Sbjct: 8 LLSDAEVKSFRKQLLDFYENTKRNLPWRKDPYKPPQKDDPDDRKKLAVQRFYEVLVSEIM 67
Query: 58 SAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
Q+ V + + T A + ++ +G Y + + ++ +
Sbjct: 68 LQQTRVETVKRYYDKWMKTLPTILHCAQADYDTEVMPLWSGMGFYGRCKRLHSACKYLAV 127
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAP 171
+ +PG+G A +LS+A+GIPT VD ++ R+ + +
Sbjct: 128 LPAEEIPTSPERLAKNVPGVGPYTAGAVLSIAWGIPTGVVDGNVQRVLSRLLALHCNVTK 187
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GK V Q ++ P N + L+ G C + C C +SN+CK ++
Sbjct: 188 GKPNAFVWQMANLLVDPNFPGNFNQALMELGAVTCTPQTFNCPGCPVSNICKAYQE 243
>gi|152988494|ref|YP_001351203.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa PA7]
gi|150963652|gb|ABR85677.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa PA7]
Length = 355
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E Q + A E
Sbjct: 12 DWYDRHGRKDLPWQQDITPYRVWVSEIMLQQTQVSTVLGYFDRFMEALPDVQALAAAAED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + P+ +E L LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYS-RARNLHKTARIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G + ++ R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLLAGCRA 210
>gi|313207043|ref|YP_004046220.1| a/g-specific adenine glycosylase [Riemerella anatipestifer DSM
15868]
gi|312446359|gb|ADQ82714.1| A/G-specific adenine glycosylase [Riemerella anatipestifer DSM
15868]
gi|315022563|gb|EFT35590.1| A/G-specific adenine glycosylase [Riemerella anatipestifer RA-YM]
Length = 346
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 81/205 (39%), Gaps = 10/205 (4%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
F + + +L + N + + + ++ Q+ + + + +
Sbjct: 15 FRIL-QWYKQNARDLPWRATKNPYNIWICEIILQQTQVQQGLQHYLNFIARFPDVKSLAE 73
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ Y + +G Y + N+ + ++ +F P + + +L GIG+ A I
Sbjct: 74 ADTDEVLLYWKGLGYYSRAI-NLQYAARQIMQDFGGTFPTNHKDILKLKGIGKYTAAAIC 132
Query: 146 SMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+++ +P +D + +R+ +R ++ + + IP + + + ++
Sbjct: 133 SISYQLPYPAIDGNFYRVFSRFFADDFDISKSNAFDYFSELTKDFIPKDNPGDFNQAIMD 192
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G +CK ++P C C ++ C
Sbjct: 193 LGSGICKPKQPSCGFCPLNKDCIAF 217
>gi|319948875|ref|ZP_08022988.1| adenine glycosylase [Dietzia cinnamea P4]
gi|319437477|gb|EFV92484.1| adenine glycosylase [Dietzia cinnamea P4]
Length = 289
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ L + + +++ ++S Q+ V + E P ++ A
Sbjct: 9 LLSWFERFGRPLPWRAEGTGAWEILLCEVMSQQTPVARVEPVWRAWLERWPGPAELAAAA 68
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + ++++ ++P ++ L LPG+G A +
Sbjct: 69 PADVIRMWGKLGYPRRALR-LRECALVVVDTHGGRVPHDVDELLALPGVGDYTARAVACF 127
Query: 148 AFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQS---LLRIIPPKH--QYNAHYWLVLH 201
A+G VDT++ R+ R P + + ++P ++
Sbjct: 128 AYGQRVPVVDTNVRRVVARAVRGEAEAGPPSTRRDLAAVEALLPDDREQAVAFSIAIMEL 187
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C +++ C
Sbjct: 188 GALVCTARTPRCDDCPLASSC 208
>gi|254497110|ref|ZP_05109930.1| A/G specific adenine glycosylase [Legionella drancourtii LLAP12]
gi|254353648|gb|EET12363.1| A/G specific adenine glycosylase [Legionella drancourtii LLAP12]
Length = 348
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + V+ ++ Q+ V + + + Q + E ++ + +G Y ++
Sbjct: 30 RSPYRVWVSEIMLQQTQVQTVIPYFERFMQRFPSIQDLAQANEDEVLSLWSGLGYYS-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ E+ P L + LPGIG A ILS AF PT +D ++ R+
Sbjct: 89 RNLHKTAQIIATEYQGIFPDELALVHELPGIGASTAAAILSQAFNQPTAILDGNVKRVLT 148
Query: 166 RIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + G K+ + +P + + ++ G C + C +C + +
Sbjct: 149 RFFMIQGHPEQALVKKKLWELAQACMPQEDCADYTQAIMDLGATCCTTKNFNCLNCPLQD 208
Query: 221 LCKRIK 226
C +K
Sbjct: 209 NCLALK 214
>gi|213692907|ref|YP_002323493.1| HhH-GPD family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524368|gb|ACJ53115.1| HhH-GPD family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320459085|dbj|BAJ69706.1| putative adenine glycosylase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 318
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 87/234 (37%), Gaps = 36/234 (15%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWNDWMARWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + + +G R+ + + ++ E+ +++P+T + L LPGIG A+
Sbjct: 66 AAAPKADVITAWGRLGYPRRALR-LRECARVVAEEYGDELPRTYDELVALPGIGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH-QYN----- 193
+LS AFG +DT+I R+ +R+ L R++P +
Sbjct: 125 VLSFAFGERIAVIDTNIRRVLSRVFLGTESRGGAASPAERALANRMLPQDRVCGDGADCT 184
Query: 194 ---------------------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P C+ C I++ C +K
Sbjct: 185 DHAYRSGEHTFLQRSEPPSVTWNQSVMELGAVVCTAKTPLCEICPIADDCAFLK 238
>gi|156975846|ref|YP_001446753.1| A/G-specific adenine glycosylase [Vibrio harveyi ATCC BAA-1116]
gi|156527440|gb|ABU72526.1| hypothetical protein VIBHAR_03591 [Vibrio harveyi ATCC BAA-1116]
Length = 358
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVVDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + ++++ + P LE + LPGIGR A +LS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKEVAHKYNGEFPLDLEQMNALPGIGRSTAAAVLSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRY 204
P +D ++ R +R G KVE L I P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLSRCFAVDGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C ++ LC KQ
Sbjct: 189 MCTRSKPKCTLCPVNELCVAKKQ 211
>gi|16766411|ref|NP_462026.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167990362|ref|ZP_02571462.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|198243866|ref|YP_002217085.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|462663|sp|Q05869|MUTY_SALTY RecName: Full=A/G-specific adenine glycosylase
gi|154184|gb|AAA27165.1| mutB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16421664|gb|AAL21985.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|197938382|gb|ACH75715.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205331157|gb|EDZ17921.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248241|emb|CBG26078.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995276|gb|ACY90161.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159665|emb|CBW19184.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914132|dbj|BAJ38106.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225784|gb|EFX50838.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323131466|gb|ADX18896.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326624857|gb|EGE31202.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332989977|gb|AEF08960.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|269837103|ref|YP_003319331.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerobacter
thermophilus DSM 20745]
gi|269786366|gb|ACZ38509.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerobacter
thermophilus DSM 20745]
Length = 247
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K EI + G L +V +LS ++DVN +A L + T
Sbjct: 19 RRKRAAEITRRLRVAHG--VGPLQPSGTPVEELVQTILSQHTSDVNSARAYAELRQRFPT 76
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI---------PQTLEGL 130
+++A +++ + IR+ G+ R+K+ I + +N ++ P+ L
Sbjct: 77 WDEVVAAPVEEVADAIRSGGLARQKAPRIQAALAAALNSGEDPPLASLFTLPLPEAKRRL 136
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR-IIPPK 189
T LPGIG K A +L A G P + VDTH++R+S R+GL L ++ P
Sbjct: 137 TSLPGIGPKTAACVLLFACGRPALPVDTHVYRVSRRVGLIDQGVSEAAAHDRLEPLLKPD 196
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
Y H L+ HGR VCKA +P+C C IS+LC +
Sbjct: 197 EVYPFHVGLIRHGRRVCKATRPRCDECCISDLCDYYQ 233
>gi|116754221|ref|YP_843339.1| HhH-GPD family protein [Methanosaeta thermophila PT]
gi|116665672|gb|ABK14699.1| HhH-GPD family protein [Methanosaeta thermophila PT]
Length = 219
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
++ + + P E+ + L+V +LS ++D+N ++A + L + ++L
Sbjct: 8 KVIEILERAYGVP--EVQSADPVDLLVLTILSQNTSDINSSRAFEQLKRRFGSYTEILNA 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRLPGIG 137
E+++ + IR G+ K+ I L ++F + L +PGIG
Sbjct: 66 SEEEIADAIRPGGLADIKAARIKGALERLRDDFGSVDLSPLKRMSAVEARNYLKSIPGIG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHY 196
K A+V++ FG+ + VDTH++R+S R+GL P + + ++ L I P + + H
Sbjct: 126 PKTASVLMLFGFGMSAMPVDTHVYRVSRRMGLVPENASIEETQRILEEITPHEKYISLHI 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ HGR VCKAR P C+ C + LC+ +
Sbjct: 186 NLIRHGRLVCKARNPLCKKCELKGLCRYAQ 215
>gi|255310908|ref|ZP_05353478.1| putative DNA glycosylase [Chlamydia trachomatis 6276]
gi|255317208|ref|ZP_05358454.1| putative DNA glycosylase [Chlamydia trachomatis 6276s]
Length = 368
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ + ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITRLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|296436546|gb|ADH18716.1| putative DNA glycosylase [Chlamydia trachomatis G/11222]
Length = 368
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ + ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITRLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|86158374|ref|YP_465159.1| A/G-specific DNA-adenine glycosylase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774885|gb|ABC81722.1| A/G-specific DNA-adenine glycosylase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 403
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 14/200 (7%)
Query: 30 YLFSLKWPSPKGELYYV------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
W + L + + + + +A ++ Q+ E T + +
Sbjct: 29 RRLLAWWDAGHRPLPWRQPQRGADPYRVWLAEVMLQQTQVATATPYWLRFVERWPTLEAL 88
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ + +G Y + + +P + E L LPG G A
Sbjct: 89 AAARDEDVLAAWSGLGYY--ARCRNLLAAAREALRRHGGLPSSHEALRALPGFGPYTAGA 146
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-----PPKHQYNAHYWL 198
+ S+AF P VD ++ R+ +R+ L G + ++ + + + + + L
Sbjct: 147 VASIAFAAPVPAVDGNVTRVLSRLFLVEGDPAARGARARVAALAAALVDRERPGDLNQAL 206
Query: 199 VLHGRYVCKARKPQCQSCII 218
+ G VC+ R P C C +
Sbjct: 207 MELGATVCRPR-PDCARCPV 225
>gi|330967497|gb|EGH67757.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 355
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERACQA 210
>gi|183596324|ref|ZP_02958352.1| hypothetical protein PROSTU_00059 [Providencia stuartii ATCC 25827]
gi|188023928|gb|EDU61968.1| hypothetical protein PROSTU_00059 [Providencia stuartii ATCC 25827]
Length = 354
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + ++ + +G Y ++
Sbjct: 28 KTSYHVWLSEVMLQQTQVSTVIPYFEKFIRRFPDVKDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ F+ + P T + + LPG+GR A ILS++ +D ++ R+
Sbjct: 87 RNLHKAAKVIAERFNGQFPTTFDDVVALPGVGRSTAGAILSLSQQQHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + + ++ G VC KP+C+ C +
Sbjct: 147 RCYAIEGWPGKKEVENRLWDISTEVTPKEGVQFFNQAMMDLGAMVCTRSKPKCELCPLHL 206
Query: 221 LCKRI 225
C
Sbjct: 207 GCIAY 211
>gi|325687487|gb|EGD29508.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK72]
Length = 389
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEADKIASFRDKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + + +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQITTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPCR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|323498663|ref|ZP_08103654.1| A/G-specific adenine glycosylase [Vibrio sinaloensis DSM 21326]
gi|323316263|gb|EGA69283.1| A/G-specific adenine glycosylase [Vibrio sinaloensis DSM 21326]
Length = 351
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + L + + +++ ++ ++ Q+ V + E T + +
Sbjct: 10 EWYENFGRKSLPWQQNKSAYSVWLSEIMLQQTQVATVIPYYQRFLERFPTVIDLANAEQD 69
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + ++ ++ + P +E + LPGIGR A ILS +
Sbjct: 70 EVLHLWTGLGYYA-RARNLHKAAKVVAEQYGGEFPLNIEEMNALPGIGRSTAAAILSSVY 128
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRY 204
P +D ++ R R G KVE L P + ++ G
Sbjct: 129 KQPHAILDGNVKRTLARSFAVEGWPGQKKVENQLWHYAEAHTPQVDVDKYNQAMMDMGAM 188
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C I ++C KQ
Sbjct: 189 VCTRSKPKCTLCPIESMCVANKQ 211
>gi|326562093|gb|EGE12421.1| A/G-specific adenine glycosylase [Moraxella catarrhalis 7169]
gi|326567054|gb|EGE17176.1| A/G-specific adenine glycosylase [Moraxella catarrhalis BC1]
Length = 410
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 79/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVCGDITKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|229525143|ref|ZP_04414548.1| A/G-specific adenine glycosylase [Vibrio cholerae bv. albensis
VL426]
gi|229338724|gb|EEO03741.1| A/G-specific adenine glycosylase [Vibrio cholerae bv. albensis
VL426]
Length = 378
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + L G+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQMVVSEYGGEFPTDLEQMNALSGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 230 FCLAKQQ 236
>gi|296114367|ref|ZP_06833021.1| A/G-specific adenine glycosylase [Gluconacetobacter hansenii ATCC
23769]
gi|295979128|gb|EFG85852.1| A/G-specific adenine glycosylase [Gluconacetobacter hansenii ATCC
23769]
Length = 362
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + N + + ++ ++ Q+T V K + T + +
Sbjct: 12 LLRWYDRHRRTLPWRALPGQTANPYHVWLSEIMLQQTTVTAVIPYFKRFTHLFPTVRDLA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + +G Y ++ N+ + + +++ + D + P T+EGL LPGIG A I
Sbjct: 72 RADQDTVMGAWAGLGYYA-RARNLHACAQMVVRDMDGRFPDTVEGLRTLPGIGPYTAAAI 130
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRI----IPPKHQYNAHYW 197
++AF P + VD ++ R++ R+ P + + + + +
Sbjct: 131 AAIAFARPVVPVDGNVERVTTRLFAMTDPLPRARPAIARQATHLNDDPLAHDRPSDFAQA 190
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L G +C R P C C C +++
Sbjct: 191 LFDLGAGICTPRAPACALCPWQGACAGLRE 220
>gi|206603113|gb|EDZ39593.1| Putative A/G-specific DNA glycosylase [Leptospirillum sp. Group II
'5-way CG']
Length = 355
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 83/230 (36%), Gaps = 15/230 (6%)
Query: 2 VSSKKSDS-YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLL 57
+S + + G +P P E + + + L + + + V+ ++
Sbjct: 1 MSPSDARGLFPGLNPSSSPPRP--TERLREDLLIWYKEVFRSLPWRINRTPYRVWVSEIM 58
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+T V + Q + + + +G Y++ + I
Sbjct: 59 LQQTTVRAVLGYFERFLGRFPDVQALAEAPVEDVLKLWEGLGYYQRARNLHKAARIIASG 118
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPN 176
F P+T+EG LPG+GR A + S+A G +D ++ R+ GL+PG
Sbjct: 119 GF----PETVEGWRNLPGVGRSTAGAVCSIALGQEAPILDANVRRVLGRLQGLSPGDAAR 174
Query: 177 K----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ E S + + L+ G VC RKP C C S C
Sbjct: 175 ESSGLWELSTAFVTGASDPGEVNQALMEIGAVVCLPRKPLCTRCPWSLDC 224
>gi|238757100|ref|ZP_04618288.1| Endonuclease III [Yersinia aldovae ATCC 35236]
gi|238704930|gb|EEP97459.1| Endonuclease III [Yersinia aldovae ATCC 35236]
Length = 169
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 79/164 (48%), Positives = 118/164 (71%)
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI 123
++VNKAT L+ +A+TPQ +L +G +++YI+TIG++ K+EN+I IL+ + ++
Sbjct: 1 MSVNKATAKLYPVANTPQAILDLGVDGVKSYIKTIGLFNTKAENVIKTCRILLEKHQGEV 60
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P+ L LPG+GRK ANV+L+ AFG PTI VDTHIFR+ NR G APG ++VE LL
Sbjct: 61 PEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEAKLL 120
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 121 KVVPAEFKLDCHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEK 164
>gi|226363775|ref|YP_002781557.1| adenine glycosylase [Rhodococcus opacus B4]
gi|226242264|dbj|BAH52612.1| putative adenine glycosylase [Rhodococcus opacus B4]
Length = 301
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 11/197 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++++ ++ Q+ V V + + P +M A
Sbjct: 17 LINWYEAQARDLPWRRDGVTAWHILMSEIMLQQTPVVRVAPIWEEWVQRWPVPSRMAASS 76
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ + +G R+ + + +L E + +P ++ L LPGIG A +
Sbjct: 77 QADVLRAWGKLGYPRRALR-LHECAGVLAAEHGDVVPSDVDTLLGLPGIGAYTARAVACF 135
Query: 148 AFGIPTIGVDTHIFRISNRIGL--APGKTPNKVE--QSLLRIIPPKHQYN--AHYWLVLH 201
A+G VDT++ R+ R A P+ + ++P L+
Sbjct: 136 AYGQRVPVVDTNVRRVVARAVHGSAEPGNPSTTRDLADVSTLLPRTRARAATFSAALMEL 195
Query: 202 GRYVCKARKPQCQSCII 218
G VC AR P+C C +
Sbjct: 196 GATVCTARSPECTRCPL 212
>gi|125718027|ref|YP_001035160.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK36]
gi|125497944|gb|ABN44610.1| A/G-specific adenine glycosylase, putative [Streptococcus sanguinis
SK36]
Length = 386
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEANKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDNPVKEF 220
>gi|326566294|gb|EGE16446.1| A/G-specific adenine glycosylase [Moraxella catarrhalis 103P14B1]
gi|326574561|gb|EGE24501.1| A/G-specific adenine glycosylase [Moraxella catarrhalis O35E]
Length = 410
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 79/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHREVCGDITKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ + ++ G +C +P+C C +++ C
Sbjct: 205 EYSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|283457251|ref|YP_003361821.1| A/G-specific DNA glycosylase [Rothia mucilaginosa DY-18]
gi|283133236|dbj|BAI64001.1| A/G-specific DNA glycosylase [Rothia mucilaginosa DY-18]
Length = 346
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 87/232 (37%), Gaps = 13/232 (5%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVL 56
M S K + P T +E + + + + +L + + ++V+
Sbjct: 1 MTSEPKRTARTRPEPTLPEGT--NIEALHHRINGWFLDQARDLPWRRDECTPWGVMVSEF 58
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + TP + A + +G R+ + + ++
Sbjct: 59 MLQQTPVKRVLPVWEEWMRRWPTPADLAAEPTSEAVRAWGRLGYPRRAQR-LHGAAVAIV 117
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI---GLAPGK 173
+ ++P E L LPG+G A I AFG+ +DT+I R+ R P +
Sbjct: 118 EQHGGEVPADYEALLALPGVGSYTAAAISVFAFGLRATVIDTNIRRVHARAVSGKALPSR 177
Query: 174 TPNKVE-QSLLRIIPPKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ E + ++P + + + G VC A+ P CQ C + +LC
Sbjct: 178 SLTAAETRLAEALMPADTPTSCLWNAATMELGALVCTAKSPSCQLCPVEDLC 229
>gi|288801059|ref|ZP_06406515.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 299
str. F0039]
gi|288331993|gb|EFC70475.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 299
str. F0039]
Length = 353
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 13/215 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + ++ + EL + N + + ++ ++ Q+
Sbjct: 1 MSKE--QQFAPTLLAWYSINGRELPWRKTTNPYFIWLSEIILQQTRVEQGMSYWHKFVNH 58
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T +++ E + + +G Y + +++ ++ P T + L +L G+
Sbjct: 59 YGTVEQLALASEDAVLLLWQGLGYYSRARNMLVAAQQVVG---MGGFPTTSKELQKLKGV 115
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQ 191
G A+ I S AF VD +++R+ R ++ EQ R++PPK
Sbjct: 116 GIYTASAIASFAFNEQVAVVDGNVYRVLARYFGIDVPIDDRKGKELFEQLAQRLLPPKGG 175
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G C P C C + C +
Sbjct: 176 AQYNQAIMDFGALQCVPASPNCMQCPLIETCDAFR 210
>gi|116053295|ref|YP_793619.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313110189|ref|ZP_07796087.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa 39016]
gi|115588516|gb|ABJ14531.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310882589|gb|EFQ41183.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa 39016]
Length = 355
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + + A E
Sbjct: 12 DWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPDVEALAAAAED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + P+ +E L LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYS-RARNLHKTAQIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G + ++ R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPSCLLCPLVSGCRA 210
>gi|15600340|ref|NP_253834.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa PAO1]
gi|107104246|ref|ZP_01368164.1| hypothetical protein PaerPA_01005319 [Pseudomonas aeruginosa PACS2]
gi|218894247|ref|YP_002443116.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa LESB58]
gi|254238150|ref|ZP_04931473.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa C3719]
gi|296391999|ref|ZP_06881474.1| A/G-specific adenine glycosylase [Pseudomonas aeruginosa PAb1]
gi|9951447|gb|AAG08532.1|AE004927_10 A / G specific adenine glycosylase [Pseudomonas aeruginosa PAO1]
gi|126170081|gb|EAZ55592.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa C3719]
gi|218774475|emb|CAW30292.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa LESB58]
Length = 355
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + + A E
Sbjct: 12 DWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPDVEALAAAAED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + P+ +E L LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYS-RARNLHKTAQIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G + ++ R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPSCLLCPLVSGCRA 210
>gi|326564542|gb|EGE14768.1| A/G-specific adenine glycosylase [Moraxella catarrhalis 46P47B1]
Length = 410
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 79/217 (36%), Gaps = 14/217 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVCGDITKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+H + ++ G +C +P+C C +++ C
Sbjct: 205 EHSGHYAQAMMDLGATICTRTQPKCHLCPVTDDCIAY 241
>gi|307330423|ref|ZP_07609567.1| HhH-GPD family protein [Streptomyces violaceusniger Tu 4113]
gi|306883940|gb|EFN14982.1| HhH-GPD family protein [Streptomyces violaceusniger Tu 4113]
Length = 308
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P + A
Sbjct: 28 DWFDAHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLARWPRPADLAAEPPG 87
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P+ L LPG+G A + S A+
Sbjct: 88 EAVRAWGRLGYPRRALR-LHGAAAAIRERHGGDVPRDHAQLLALPGVGEYTAAAVASFAY 146
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQY--NAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + G
Sbjct: 147 GQRHPVLDTNVRRVFARAVGGAQYPPNATTAAERKQARTLLPGDEPTAARWAAATMELGA 206
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P C C I+ LC
Sbjct: 207 LVCTARTPDCARCPIAALC 225
>gi|91201723|emb|CAJ74783.1| similar to endonuclease III [Candidatus Kuenenia stuttgartiensis]
Length = 217
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
F ++++ LLS ++ D A++ LF IAD P+ M I +KL+ I +G YR+K+
Sbjct: 32 RTPFHVLISCLLSLRTKDQTTRAASERLFAIADNPEDMKKIPLQKLEKLIYPVGFYRRKA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
I + L +++ K+P ++ L +L G+GRK AN+++S+ + P I VD H+ RI+N
Sbjct: 92 VTIQEICETLTKDYEGKVPDEIDELLKLNGVGRKTANLVVSLGYKKPGICVDVHVHRINN 151
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
R G KTP + E +L + +P K+ + LV +G+ +C P+C C +++ CK+
Sbjct: 152 RWGYIKTKTPAETECALRKKLPAKYWLCINDLLVTYGQNICVPISPKCSLCPVNSYCKK 210
>gi|24215028|ref|NP_712509.1| A/G specific adenine glycosylase [Leptospira interrogans serovar
Lai str. 56601]
gi|24196076|gb|AAN49527.1| A/G specific adenine glycosylase [Leptospira interrogans serovar
Lai str. 56601]
Length = 375
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
PK + E+ + K EL + N + + V+ ++ Q+ + + +
Sbjct: 10 PKLILELRKNLLSWFHKNKRELPFRINKNAYRIWVSEIMLQQTRVTAMLPIYETFLKRFP 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + E+++ Y + +G Y +++N+ + +L+ ++ ++ P+ E +PG+G
Sbjct: 70 DPNSLSEASEEEVMKYWKGLGYYS-RAKNLKKGARLLVEKYQSRFPENYEEALLIPGVGS 128
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH-----QYN 193
A+ +LS+A+G P +D ++ R+ +R+ L L + + +
Sbjct: 129 YTASAVLSIAYGKPHAVLDGNVKRVLSRLFLVESDPSLTSTNQTLADLAKEFLTPQSPGD 188
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G VC P C +C + N C+
Sbjct: 189 HNEAVMELGALVCVPI-PNCSACPLQNHCEA 218
>gi|227489398|ref|ZP_03919714.1| A/G-specific DNA glycosylase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090576|gb|EEI25888.1| A/G-specific DNA glycosylase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 311
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ ++S Q+ V A + + TP + A
Sbjct: 39 LISWYRRCGRDLPWREEGTSAWAVLVSEVMSQQTPVSRVIPAWREWMDKWPTPADLAAAD 98
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + +P++++ L LPGIG A + +
Sbjct: 99 TSDVLRAWGRLGYPRRAL-----WLKQAAEKMEGTVPRSVDKLLELPGIGDYTARAVAAF 153
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG P VD ++ R+ R+ A TP + L RI P+ L+ G VC
Sbjct: 154 AFGSPVPVVDVNVRRVHYRLFDATYLTPPARKGDLARITAPE--PELSVALMELGALVCT 211
Query: 208 ARKPQCQSCIISNLC 222
A PQC+SC +++ C
Sbjct: 212 ATNPQCESCPLADQC 226
>gi|285018842|ref|YP_003376553.1| a/g-specific adenine glycosylase [Xanthomonas albilineans GPE PC73]
gi|283474060|emb|CBA16561.1| probable a/g-specific adenine glycosylase protein [Xanthomonas
albilineans]
Length = 362
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 15/224 (6%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNV 66
+ S ++ P + + + +L + + + + ++ ++ Q+ V
Sbjct: 2 RKKSTPALMHQP--ADHFAAHLLAWFDRHGRHDLPWQHPRSPYRVWLSEIMLQQTQVAVV 59
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
T + A + +G Y ++ N+ + + + D ++P+
Sbjct: 60 IPYFLRFLTHFPTLSALAAADNDAVMAQWAGLGYYA-RARNLHAAAKHCVALHDGELPRD 118
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI 185
E L LPGIGR A ILS A+ +D ++ R+ + G+A VE+ L +
Sbjct: 119 FEALNALPGIGRSTAGAILSQAWNDRFPILDGNVKRVLTRYHGIAGYPGLPAVEKPLWAM 178
Query: 186 -------IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+P + + G +C P C C + + C
Sbjct: 179 AHAHVGAVPDGRMADYTQAQMDFGATLCTRANPACVLCPLQDDC 222
>gi|212709345|ref|ZP_03317473.1| hypothetical protein PROVALCAL_00381 [Providencia alcalifaciens DSM
30120]
gi|212688257|gb|EEB47785.1| hypothetical protein PROVALCAL_00381 [Providencia alcalifaciens DSM
30120]
Length = 350
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E ++ + + L + + + + ++ ++ Q+ V + +
Sbjct: 2 EAQQFSSAVLKWYHKYGRKTLPWQQEKSSYHVWLSEVMLQQTQVSTVIPYFEKFTQRFAD 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++ + +G Y ++ N+ + ++ ++ + P T E + LPG+GR
Sbjct: 62 VTALANAPLDEVLHLWTGLGYYA-RARNLHKAAQVIATQYQGQFPTTFEEVNALPGVGRS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNA 194
A ILS++ +D ++ R+ R G +VE L ++ P
Sbjct: 121 TAGAILSLSQKQHYPILDGNVKRVLARCYAVEGWPGKKEVENRLWDISTKVTPNVEVEYF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G VC KP+C+ C ++ C
Sbjct: 181 NQAMMDLGAMVCTRSKPKCELCPLNTGCIAY 211
>gi|74025286|ref|XP_829209.1| A/G-specific adenine glycosylase [Trypanosoma brucei TREU927]
gi|41223390|tpe|CAD59974.1| TPA: putative MutY homologue [Trypanosoma brucei]
gi|70834595|gb|EAN80097.1| A/G-specific adenine glycosylase, putative [Trypanosoma brucei]
Length = 510
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 11/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + V+ ++S Q+ V K + + E + +G YR+
Sbjct: 106 TDPYHVWVSEVMSQQTQMDTVIPYFKRWIAVFPDIATLARATEASVMAVWSGMGYYRRAL 165
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + ++ F +P T L +PGIG + I S+ F I VD ++ R+ +
Sbjct: 166 -YLKKGAEHVMKHFGGSLPTTAAQLRAIPGIGLYTSAAIASICFRERIISVDGNVVRVLS 224
Query: 166 RIGLAPGKTP------NKVEQSLLRII---PPKHQYNAHYWLVLHGRYVCKAR-KPQCQS 215
R+ P +V I+ P + + L+ G VCK +P C+
Sbjct: 225 RLRCERNFDPKSAKSIKEVFHWGQEIMGEGPCDRPGDFNQGLMEIGARVCKPSGRPLCEE 284
Query: 216 CIISNLCKRI 225
C + C
Sbjct: 285 CPLHRYCGAY 294
>gi|326572219|gb|EGE22214.1| A/G-specific adenine glycosylase [Moraxella catarrhalis BC8]
Length = 410
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 14/214 (6%)
Query: 23 KELEEIFYLFSLKWP-SPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ + + L + + + + V+ ++ Q+ V V K +
Sbjct: 25 EQRHSFAKRLLTWFELHGRHGLPWQYHHQPSADIYAVWVSEIMLQQTQVVTVLKFFEPFL 84
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRL 133
T Q++ +++ ++ +G Y + + + + P+T+ +
Sbjct: 85 ARFATVQELAVADWQEVASFWAGLGYYARARNLHAGAQQVADFIDTHGRFPETVNEWQAV 144
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPP 188
G+GR A I++M + D ++ R+ R G T ++ + + P
Sbjct: 145 KGVGRSTAGAIVAMGVKKFGVICDGNVKRVLARHRAVFGDVTKSATDKRLWEIATALTPK 204
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+H + ++ G +C +P+C C +S+ C
Sbjct: 205 EHSGHYAQAMMDLGATICTRTQPKCHLCPVSDDC 238
>gi|58039545|ref|YP_191509.1| A/G-specific adenine DNA glycosylase [Gluconobacter oxydans 621H]
gi|58001959|gb|AAW60853.1| A/G-specific adenine DNA glycosylase [Gluconobacter oxydans 621H]
Length = 458
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 17/205 (8%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + T Q +
Sbjct: 113 LLRWYDHHRRVLPWRSLPGHRPDPYAVWLSEIMLQQTTVKAVIAYYERFLTHYPTVQDLA 172
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A + + + +G Y + + P T+E L LPGIG A I
Sbjct: 173 AAPLEDVLHLWAGLGYYARARNLH---ACAKRVSERGGFPDTVEELLTLPGIGAYTARAI 229
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-------NKVEQSLLRIIPPKHQYNAHYW 197
++AFG P + VD ++ R++ R+ P + + +
Sbjct: 230 AAIAFGRPVVPVDGNVERVTARLNAIEDPLPASRPLLARQAALLNDDPVAQSRPSDFAQA 289
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L G +C R P C +C C
Sbjct: 290 LFDLGATICTPRSPACLTCPWQTSC 314
>gi|325579182|ref|ZP_08149138.1| A/G-specific adenine glycosylase [Haemophilus parainfluenzae ATCC
33392]
gi|325159417|gb|EGC71551.1| A/G-specific adenine glycosylase [Haemophilus parainfluenzae ATCC
33392]
Length = 372
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + + + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVTTVIPYFERFIKTFPNVTALANASQDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P E + L G+GR A ILS P +D ++ R+ +
Sbjct: 92 RNLHKAAQTIRDKYQGEFPTQFEQVWALTGVGRSTAGAILSSVQNQPYPILDGNVKRVLS 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G + KVE L ++ P + ++ G +C KP+C C +SN
Sbjct: 152 RYFAVDGWSGEKKVENQLWQLSEQVTPTTKVAEFNQAMMDIGSAICTRTKPKCDLCPLSN 211
Query: 221 LCKRIK 226
C K
Sbjct: 212 DCLANK 217
>gi|255530045|ref|YP_003090417.1| helix-hairpin-helix motif protein [Pedobacter heparinus DSM 2366]
gi|255343029|gb|ACU02355.1| helix-hairpin-helix motif protein [Pedobacter heparinus DSM 2366]
Length = 349
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 9/197 (4%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + K +L + + + + ++ ++ Q+ + + T + E +
Sbjct: 9 NWYLNHKRDLPWRGTTDAYIIWLSEVILQQTRVDQGLPYFNNFLQNYPTVLDFASASETQ 68
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y + N++ + + + P + L +L GIG A I S +
Sbjct: 69 VLKLWQGLGYYS-RGRNMLFTARQVRDLHGGVFPVRYDQLIKLKGIGEYTAAAIASFSSN 127
Query: 151 IPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+D ++FR+ +R + + +I + + ++ G
Sbjct: 128 ESKAVLDGNVFRVLSRYFGIESPINSSTGKKQFADLAQSLISGQQPSVYNQAIMEFGALQ 187
Query: 206 CKARKPQCQSCIISNLC 222
CK + P C C + + C
Sbjct: 188 CKPKSPNCGICPVQDSC 204
>gi|269128666|ref|YP_003302036.1| HhH-GPD family protein [Thermomonospora curvata DSM 43183]
gi|268313624|gb|ACY99998.1| HhH-GPD family protein [Thermomonospora curvata DSM 43183]
Length = 296
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + ++V+ ++ Q+ V + E TP + A +
Sbjct: 18 WYAEHARDLPWRAPDATPWGILVSEVMLQQTPVARVLPIWRRWMERWPTPAALAAEPSGE 77
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + + ++P + E L LPGIG A + S A+
Sbjct: 78 AVRAWGRLGYPRRALR-LHACAVAITERHGGQVPSSYEALRELPGIGAYTAAAVASFAYR 136
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSL---LRIIPPKHQY--NAHYWLVLHGRY 204
+DT++ R+ R+ P + + ++P ++ G
Sbjct: 137 QRHAVLDTNVRRVLARLIGGVEYPPRSQTAAEVALAESLLPHDAPTAARWSVAIMELGAL 196
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 197 VCTARNPRCVDCPVLAEC 214
>gi|168463703|ref|ZP_02697620.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197265477|ref|ZP_03165551.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205354032|ref|YP_002227833.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858371|ref|YP_002245022.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|195633533|gb|EDX51947.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197243732|gb|EDY26352.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205273813|emb|CAR38809.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710174|emb|CAR34530.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326629145|gb|EGE35488.1| A/G-specific adenine glycosylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 350
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|254243972|ref|ZP_04937294.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa 2192]
gi|126197350|gb|EAZ61413.1| A / G specific adenine glycosylase [Pseudomonas aeruginosa 2192]
Length = 355
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V + + A E
Sbjct: 12 DWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPDVEALAAAAED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + P+ +E L LPGIGR A I S++
Sbjct: 72 EVLHLWTGLGYYS-RARNLHKTAQIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G + ++ R P + ++ G
Sbjct: 131 GLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + + C+
Sbjct: 191 LCTRSKPSCLLCPLVSGCRA 210
>gi|229512514|ref|ZP_04401985.1| A/G-specific adenine glycosylase [Vibrio cholerae TMA 21]
gi|229350407|gb|EEO15356.1| A/G-specific adenine glycosylase [Vibrio cholerae TMA 21]
Length = 378
Score = 98.1 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++NE+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQTVVNEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 230 FCLAKQQ 236
>gi|170718115|ref|YP_001785147.1| A/G-specific adenine glycosylase [Haemophilus somnus 2336]
gi|168826244|gb|ACA31615.1| A/G-specific adenine glycosylase [Haemophilus somnus 2336]
Length = 370
Score = 98.1 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + ++ + ++ + +G Y ++
Sbjct: 33 KTLYGVWLSEVMLQQTQVATVIPYFERFIKVFPNITALANAPLDEVLHLWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + +++ + P + + LPGIGR A +LS P +D ++ R+
Sbjct: 92 RNLHRAAQTIRDQYQGEFPTDFQHVWALPGIGRSTAGAVLSSVLNQPYPILDGNVKRVLT 151
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G T KVE L ++ P + + + ++ G VC KP+C C ++
Sbjct: 152 RYFQVQGWTGDKKVEDKLWQLSAEVTPTEQVADFNQAMMDLGAMVCTRTKPKCLLCPLAI 211
Query: 221 LC 222
C
Sbjct: 212 KC 213
>gi|293390119|ref|ZP_06634453.1| endonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950653|gb|EFE00772.1| endonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 147
Score = 98.1 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 68/139 (48%), Positives = 96/139 (69%)
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
L+ YI+TIG++ K+ENII LI + + +P+ L L G+GRK ANV+L+ A
Sbjct: 6 DGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNGDVPEDRAALEALAGVGRKTANVVLNTA 65
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
FG PTI VDTHIFR+ NR G APGK KVE+ L++++P + + + H+WL+LHGRY C A
Sbjct: 66 FGHPTIAVDTHIFRVCNRTGFAPGKDVVKVEEKLIKVVPAEFKVDVHHWLILHGRYTCVA 125
Query: 209 RKPQCQSCIISNLCKRIKQ 227
RKP+C +CII +LC+ +
Sbjct: 126 RKPRCGACIIEDLCEYKDK 144
>gi|260436037|ref|ZP_05790007.1| A/G-specific DNA-adenine glycosylase [Synechococcus sp. WH 8109]
gi|260413911|gb|EEX07207.1| A/G-specific DNA-adenine glycosylase [Synechococcus sp. WH 8109]
Length = 372
Score = 98.1 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 10/192 (5%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P+P+ +L + + + +A ++ Q+ T + + A +++ +
Sbjct: 36 PAPQQQL---DPYGIWIAEVMLQQTQLAVALPYWTRWMAAFPTIEALAAASLDEVRLQWQ 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + + P++LE LPGIGR A ILS AF P +
Sbjct: 93 GLGYYSRARRLHEA----AQRLVGQPWPRSLEAWMGLPGIGRTTAGSILSSAFNAPLPIL 148
Query: 157 DTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
D ++ R+ R+ P ++ P + + L+ G +C R+P C
Sbjct: 149 DGNVKRVLARLTAHPRPPARDYALFWSWSEALLDPLRPRDTNQALMDLGATLCTPRQPDC 208
Query: 214 QSCIISNLCKRI 225
C C
Sbjct: 209 HRCPWQLHCASY 220
>gi|254492670|ref|ZP_05105841.1| A/G-specific adenine glycosylase [Methylophaga thiooxidans DMS010]
gi|224462191|gb|EEF78469.1| A/G-specific adenine glycosylase [Methylophaga thiooxydans DMS010]
Length = 347
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWPS-PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + + ++ ++ Q+ V + +
Sbjct: 9 DALLNWYDQFGRKDLPWQQSPTPYHVWLSEIMLQQTQVTTVIDYYLRFTRRFPGIRSLAQ 68
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ + Y +G Y ++ N+ + I++ +F ++P+TLE L LPGIGR A IL
Sbjct: 69 AKQDDVLAYWSGLGYYA-RARNLHKTAQIVVADFAGEMPKTLEQLIALPGIGRSTAGAIL 127
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVL 200
++A+ P +D ++ R+ R G NK+ Q +++P + N +
Sbjct: 128 TLAYHQPFPILDGNVKRVLTRFDAISGWPGNKQVENKLWQRAEQLLPNRRIANYIQAQMD 187
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
G +C KP CQ+C + + C+
Sbjct: 188 LGATLCTRSKPDCQNCPMQHHCQAF 212
>gi|332361175|gb|EGJ38979.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK1056]
Length = 386
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWGADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + + +F K P + EGL L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQITTDFAGKFPDSYEGLASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQSLMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|304387270|ref|ZP_07369463.1| A/G-specific adenine glycosylase [Neisseria meningitidis ATCC
13091]
gi|304338653|gb|EFM04770.1| A/G-specific adenine glycosylase [Neisseria meningitidis ATCC
13091]
Length = 346
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 85/216 (39%), Gaps = 8/216 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ TP E + + N + + ++ ++ Q+ V E
Sbjct: 1 MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVATVLDYYPRFLEKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T Q + A + ++ + +G Y ++ N+ + ++ +F P + L L G+GR
Sbjct: 61 TVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAAQQVVRQFGGTFPSERKDLETLCGVGR 119
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
A I + AF +D ++ R+ R+ G +K + ++P ++
Sbjct: 120 STAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAESLLPSENADM 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK KP C C ++++C+ KQ
Sbjct: 180 PAYTQGLMDLGATMCKRTKPLCHQCPMADICEAKKQ 215
>gi|261749188|ref|YP_003256873.1| A/G-specific adenine glycosylase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497280|gb|ACX83730.1| A/G-specific adenine glycosylase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 351
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 76/205 (37%), Gaps = 8/205 (3%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + N + ++V+ + Q+ K + +K+
Sbjct: 5 KKIINWYKNNYRKLPWRETKNPYYVLVSEFMLQQTRVSKTLKYYLDFVKKFPNLEKLAYA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
EK++ +G Y + + ++ + P+T + L + GIG + S
Sbjct: 65 EEKEVLKEWEGLGYYTRARYLHLFAKQLVKEKPSGFFPKTYKELIKYKGIGPYTGAAVAS 124
Query: 147 MAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ F +D + +R+ + + + N +L+I+ + ++
Sbjct: 125 ICFDEVIPALDGNAYRVFSRYLGIYHNITSFRAKNIFRFFILKIMDHNDPGIFNQAVMDL 184
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G +C RK +C SC + + C +K
Sbjct: 185 GSTLCTPRKAKCFSCPVKSSCFSLK 209
>gi|237750247|ref|ZP_04580727.1| A/G-specific adenine glycosylase [Helicobacter bilis ATCC 43879]
gi|229374141|gb|EEO24532.1| A/G-specific adenine glycosylase [Helicobacter bilis ATCC 43879]
Length = 356
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 10/211 (4%)
Query: 21 TPKELEEIFYL-FSLKWP-SPKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKH 72
K++ + + + + + L + N + + V+ ++ Q+ V +
Sbjct: 17 KAKDIAKQWQIQLLEWYAIQGRISLPWRNLKGENAPYGVYVSEIMLQQTQVKRVQEHYFA 76
Query: 73 -LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
T + + + +G Y ++ N+ + I + + +P T + L
Sbjct: 77 PFLNAFPTLESLAKANLDSILKQWEGLGYYS-RARNMQKTAIICCEKHNATLPNTRQDLL 135
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPGIG + IL F VD +I R+ RI +++ ++ KH
Sbjct: 136 TLPGIGAYTSGAILCFGFHQSVSFVDGNIRRVLCRIFALREPNQKLLDELAFLLLDTKHS 195
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + L+ G +C + P C C + NLC
Sbjct: 196 FDYNQALLDLGAMICTPKSPSCLICPVQNLC 226
>gi|77165730|ref|YP_344255.1| A/G-specific adenine glycosylase MutY [Nitrosococcus oceani ATCC
19707]
gi|254433784|ref|ZP_05047292.1| A/G-specific adenine glycosylase [Nitrosococcus oceani AFC27]
gi|76884044|gb|ABA58725.1| A/G-specific DNA-adenine glycosylase [Nitrosococcus oceani ATCC
19707]
gi|207090117|gb|EDZ67388.1| A/G-specific adenine glycosylase [Nitrosococcus oceani AFC27]
Length = 354
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 10/204 (4%)
Query: 30 YLFSLKWPS-PKGELYYV-NH--FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + + +L + N + + V+ ++ Q+ V + E + +
Sbjct: 8 QRLLTWFDAYGRKDLPWQQNPTLYRVWVSEIMLQQTQVATVIPYYQRFIERFPSLPALAH 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G Y ++ + + I ++P TLE L LPGIGR IL
Sbjct: 68 ASVDEILGLWAGLGYYA-RARRLHQAARIAWETHGGELPATLEALMELPGIGRSTGGAIL 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLR----IIPPKHQYNAHYWLVL 200
++A G +D ++ R+ R KVE+ L + ++P + ++
Sbjct: 127 ALALGQRYPILDGNVKRVLTRQEAIEHWPGQPKVEKQLWQRAATLLPRTRLADYTQAIMD 186
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G VC +P C SC + C+
Sbjct: 187 LGATVCTRHRPHCPSCPVKKTCQA 210
>gi|238909908|ref|ZP_04653745.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 350
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMIDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|15835002|ref|NP_296761.1| A/G-specific adenine glycosylase [Chlamydia muridarum Nigg]
gi|270285169|ref|ZP_06194563.1| A/G-specific adenine glycosylase [Chlamydia muridarum Nigg]
gi|270289188|ref|ZP_06195490.1| A/G-specific adenine glycosylase [Chlamydia muridarum Weiss]
gi|301336564|ref|ZP_07224766.1| A/G-specific adenine glycosylase [Chlamydia muridarum MopnTet14]
gi|7190423|gb|AAF39240.1| A/G-specific adenine glycosylase [Chlamydia muridarum Nigg]
Length = 371
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
F L + K + + + V+ ++ Q+ V E + Q +
Sbjct: 15 LEAFRLWFLECKRSFPWRESPTPYRVWVSEVMLQQTRAEVVVPYFLRWMERFPSIQDLAH 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E ++ +G Y ++ N++S + ++ F +IPQ L + GIG AN IL
Sbjct: 75 AEESEVVRLWEGLGYYS-RARNLLSGARVITELFQGEIPQDPLLLNSIKGIGPYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ KT ++ + ++P +
Sbjct: 134 AFAFKQKKAAVDGNVLRVMSRLFAINQSIDRIKTRQEITELCETLLPDYEPEVIAEAFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C RKP C+ C + + CK ++
Sbjct: 194 LGARICN-RKPVCEQCPLRSFCKAYQE 219
>gi|323436039|ref|ZP_01049918.2| A/G-specific adenine glycosylase [Dokdonia donghaensis MED134]
gi|321496354|gb|EAQ39890.2| A/G-specific adenine glycosylase [Dokdonia donghaensis MED134]
Length = 332
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 9/193 (4%)
Query: 43 LYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
+ + N + + ++ ++ Q+ E T Q + E+++ + +G
Sbjct: 1 MPWRNTTHPYHIWLSEIILQQTRVAQGLPYYIAFTEAFPTVQDLAQATEEEVLKLWQGLG 60
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
Y + N+ + + +++ E D P T E + +L G+G A+ I S+ F PT VD +
Sbjct: 61 YYS-RGRNLHASAKMIVEEMDGVFPNTYEEIKKLKGVGDYTASAIASICFNEPTAVVDGN 119
Query: 160 IFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
++R+ +R+ + + +I + + ++ G CK + P C
Sbjct: 120 VYRVLSRVYGIDTPINSTAGIKEFKALAQELIDENRPADFNQAIMEFGAIQCKPQNPYCL 179
Query: 215 SCIISNLCKRIKQ 227
CI ++ C ++Q
Sbjct: 180 HCIYNHSCVALQQ 192
>gi|258625599|ref|ZP_05720481.1| A/G-specific adenine glycosylase [Vibrio mimicus VM603]
gi|258582101|gb|EEW06968.1| A/G-specific adenine glycosylase [Vibrio mimicus VM603]
Length = 369
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 42 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++NE+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 101 RNLHKAAQMVVNEYGGEFPIDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 160
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 161 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 220
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 221 FCLAKQQ 227
>gi|317505050|ref|ZP_07962997.1| A/G-specific adenine glycosylase [Prevotella salivae DSM 15606]
gi|315663828|gb|EFV03548.1| A/G-specific adenine glycosylase [Prevotella salivae DSM 15606]
Length = 345
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 11/204 (5%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ E + + A E
Sbjct: 14 LLTWYSKHGRHLPWRTTQDPYAIWLSEVILQQTRIAQGTSYWLRFMEKWPHVEDLAAATE 73
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + I+ + RL G+G A I S A
Sbjct: 74 DEVMRMWQGLGYYSRARNLYQAAQQIVTLGQFPNTLS---DIKRLKGVGDYTAAAIGSFA 130
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
FG+ VD + +R+ R +P + + ++ G
Sbjct: 131 FGLQVAAVDGNFYRVLARYFGIDTPMNTPEGVKLFAALAQEHLPEGAAADYNQAVMDFGA 190
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C + PQC C ++ C ++
Sbjct: 191 TLCTPKAPQCTRCPLAETCVARRE 214
>gi|213579924|ref|ZP_03361750.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 294
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE +L + P + + ++ G VC KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCTLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|21231855|ref|NP_637772.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768018|ref|YP_242780.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113575|gb|AAM41696.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573350|gb|AAY48760.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 356
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 13/214 (6%)
Query: 26 EEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + + + ++ ++ Q+ V + T
Sbjct: 10 DAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFQKFVASFPTLA 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + + +G Y ++ N+ + + + ++P+ + L LPGIGR A
Sbjct: 70 DLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVALHAGELPRDFDALLALPGIGRSTA 128
Query: 142 NVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI-------IPPKHQYN 193
ILS A+ +D ++ R+ + G+A VE+ L ++ +P +
Sbjct: 129 GAILSQAWNDRFPIMDGNVKRVLTRIHGIAGYPGLPVVEKQLWQLAANHVAHVPAGRLAD 188
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G +C +P C C + C ++
Sbjct: 189 YTQAQMDFGATLCTRARPACMVCPLQENCVARRE 222
>gi|224824792|ref|ZP_03697899.1| A/G-specific adenine glycosylase [Lutiella nitroferrum 2002]
gi|224603285|gb|EEG09461.1| A/G-specific adenine glycosylase [Lutiella nitroferrum 2002]
Length = 346
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 9/201 (4%)
Query: 30 YLFSLK---WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + ++ ++ Q+ V +
Sbjct: 7 ERLIAWQQTHGRHGLPWQVSDPYRVWLSEIMLQQTQVSTVLGYYARFLARFPDVASLAVA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y ++ N+ + ++++EF + PQ + RLPGIGR A + +
Sbjct: 67 PLDDVLTLWSGLGYYT-RARNLHKAAGMVMSEFGGQFPQERNQIERLPGIGRSTAAAVAA 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLH 201
AFG +D ++ R+ R G KVEQ L ++P + ++
Sbjct: 126 FAFGQREAILDGNVKRVLTRCFGVEGFPGEKKVEQQLWVLAESLLPNQGMTAYTQGMMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC KP C C + + C
Sbjct: 186 GATVCTRSKPACTVCPMVDRC 206
>gi|153876556|ref|ZP_02003816.1| Endonuclease III/Nth [Beggiatoa sp. PS]
gi|152066979|gb|EDN66183.1| Endonuclease III/Nth [Beggiatoa sp. PS]
Length = 131
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 71/125 (56%), Positives = 93/125 (74%)
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
++ K+ NII IL+ + D K+P+ + L LPG+GRK ANVIL+ AFG TI VDTH
Sbjct: 1 MFNNKARNIIQTCDILLKQHDGKVPRERQALEALPGVGRKTANVILNTAFGESTIAVDTH 60
Query: 160 IFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
IFR+SNR GLAPGKT +VE LL+ +P K+Q NAH+WL+LHGRYVC ARKP+C C+I+
Sbjct: 61 IFRLSNRTGLAPGKTVRQVEDQLLKTVPKKYQKNAHHWLILHGRYVCTARKPKCGECVIA 120
Query: 220 NLCKR 224
+LC+
Sbjct: 121 DLCEY 125
>gi|45657486|ref|YP_001572.1| A/G specific adenine glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600725|gb|AAS70209.1| A/G specific adenine glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 375
Score = 98.1 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
PK + E+ + K EL + N + + V+ ++ Q+ + + +
Sbjct: 10 PKLILELRKNLLSWFHKNKRELPFRINKNAYRIWVSEIMLQQTRVTAMLPIYETFLKRFP 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P + E+++ Y + +G Y +++N+ + +L+ ++ ++ P+ E +PG+G
Sbjct: 70 DPNSLSEASEEEVMKYWKGLGYYS-RAKNLKKGARLLVEKYQSRFPENYEEALLIPGVGS 128
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH-----QYN 193
A+ +LS+A+G P +D ++ R+ +R+ L L + + +
Sbjct: 129 YTASAVLSIAYGKPHAVLDGNVKRVLSRLFLVESDPSLTSTNQTLADLAKEFLTPQSPGD 188
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G VC P C +C + N C+
Sbjct: 189 HNEAVMELGALVCVPI-PNCSACPLQNHCEA 218
>gi|326403695|ref|YP_004283777.1| A/G-specific DNA-adenine glycosylase [Acidiphilium multivorum
AIU301]
gi|325050557|dbj|BAJ80895.1| A/G-specific DNA-adenine glycosylase [Acidiphilium multivorum
AIU301]
Length = 358
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 17/207 (8%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+ V E T
Sbjct: 20 ENLLRWYHVHRRILPWRAGPGSLPDPYHVWLSEIMLQQTVVATVIPYFHRFIERFPTISD 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + ++ +G Y + I P TL+GL LPGIG A
Sbjct: 80 LAVAADDEILGLWAGLGYYARARNLI---RCARAVAEAGGFPVTLDGLRALPGIGPYTAA 136
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP-------PKHQYNAH 195
I ++AF IP + VD ++ R++ R+ P + + +
Sbjct: 137 AIGAIAFDIPVVPVDGNVERVTARMFAIEEALPAAKDAIAVAAARLGAQAAAQSRPGDFA 196
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L G VC R P C C + C
Sbjct: 197 QALFDLGATVCTPRSPSCMVCPWRDGC 223
>gi|254482673|ref|ZP_05095911.1| A/G-specific adenine glycosylase [marine gamma proteobacterium
HTCC2148]
gi|214037032|gb|EEB77701.1| A/G-specific adenine glycosylase [marine gamma proteobacterium
HTCC2148]
Length = 353
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 9/193 (4%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + V+ ++ Q+ V + ++ E ++ +
Sbjct: 18 RHDLPWQRDTTPYRVWVSEIMLQQTQVKTVIPYFARFMAAFPSVDRLAQADEDQVLHLWT 77
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + E + + P+ ++ L +L G+GR A I+S+++G +
Sbjct: 78 GLGYYA-RARNLHKAAKYVCQELNGQFPEEVDELCQLAGVGRSTAGAIVSISYGKRAAIL 136
Query: 157 DTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G N++ + + P + ++ G VC P
Sbjct: 137 DGNVKRVLARYRSVDGWPGKTAVHNRLWEIAEQYTPYARSADFTQAMMDLGATVCTRSSP 196
Query: 212 QCQSCIISNLCKR 224
QC C + C
Sbjct: 197 QCDRCPLFEDCSA 209
>gi|305680362|ref|ZP_07403170.1| putative A/G-specific adenine glycosylase [Corynebacterium
matruchotii ATCC 14266]
gi|305659893|gb|EFM49392.1| putative A/G-specific adenine glycosylase [Corynebacterium
matruchotii ATCC 14266]
Length = 304
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 83/217 (38%), Gaps = 17/217 (7%)
Query: 21 TPKELEEI----FYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKH 72
TP++ E+ + + ++ + + ++++ ++S Q+ V
Sbjct: 8 TPEKSAELRTVLHRRLPAWFAANARDIAWRTPETSAWGVLLSEVMSQQTQVARVEPIWLG 67
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
TP A + +G R+ + + ++ + +P+ + L
Sbjct: 68 WINRWPTPTDFAAARIDDVLRAWGRLGYPRRALR-LHECAQQIVAHHNGVVPEDVTDLLA 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSLLR-IIPPK 189
LPGIG A + + A+G VDT++ R+ R ++P+K E +++ ++P
Sbjct: 127 LPGIGDYTARAVAAFAYGQRVPVVDTNVRRVLARFYHGEYEPRSPSKRELAVMESLLPDA 186
Query: 190 ----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C P+C C + + C
Sbjct: 187 DGDVDAAKFSTAIMELGALICT-TTPKCGDCPLRSSC 222
>gi|241682023|ref|XP_002401078.1| endonuclease, putative [Ixodes scapularis]
gi|215504370|gb|EEC13864.1| endonuclease, putative [Ixodes scapularis]
Length = 326
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ L+V+++LS+Q+ D + A L + TP+ + A EK+L+ I + Y+ K++++
Sbjct: 136 YQLLVSLMLSSQTKDEVTHAAVGRLRDFGLTPEVVSAAEEKQLEELIYPVSFYKNKAKHL 195
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S +L++E+D IP ++EGL +LPG+G K + + +S + VDTH+ RISN +
Sbjct: 196 KRTSQVLLDEYDGDIPDSIEGLCKLPGVGPKMSYLAMSCGWKRTVGIGVDTHVHRISNWL 255
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P KTP + ++L +P + LV G+ VCK P+C SC+ LC
Sbjct: 256 GWLPQATKTPEQTRKALEAWLPRDLWDEVNLLLVGFGQTVCKPVAPKCSSCLNLQLCPYG 315
Query: 226 KQ 227
++
Sbjct: 316 RK 317
>gi|332373842|gb|AEE62062.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A++LS+Q+ D + A L E T + +L +++L I +G +R K + I
Sbjct: 43 YQALLALMLSSQTKDQVNHAAMLRLREHGCTVENILNTSDEELGKLIIPVGFWRNKVKYI 102
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL N+++ IP T+E + +LPG+G K A++ + +A+G T VDTH+ RI+NR+
Sbjct: 103 KKTSEILKNQYNCDIPNTIEDMLKLPGVGPKMAHLCMKVAWGEVTGIGVDTHVHRIANRM 162
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G KTP + E++L +P ++ LV G+ +C+ PQC SC+ +C K
Sbjct: 163 GWVKTKTPEQTEKALESWLPFDLWNEVNHLLVGFGQQICRPINPQCSSCLNKTICPASK 221
>gi|315125700|ref|YP_004067703.1| A/G-specific adenine glycosylase [Pseudoalteromonas sp. SM9913]
gi|315014214|gb|ADT67552.1| A/G-specific adenine glycosylase [Pseudoalteromonas sp. SM9913]
Length = 352
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V V + + + E ++ ++ +G Y ++
Sbjct: 33 KTPYKVWVSEVMLQQTQVVTVIPYFEKFMQSFPDIIALANADEDQVLHHWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+ +++ + P T+E + LPGIGR A +LS++ G +D ++ R+
Sbjct: 92 RNLHKTAKIVRDKYQGQFPSTIEEVMDLPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLA 151
Query: 166 RIGLAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + G KVE L ++ P + + ++ G +C + C++C +
Sbjct: 152 RFFMVEGWYGIKKVENQLWHLSEQLTPKNNVTEFNQAMMDLGASLCSRSRFDCEACPLKT 211
Query: 221 LCKRI 225
C
Sbjct: 212 QCGAF 216
>gi|162147119|ref|YP_001601580.1| A/G-specific adenine glycosylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785696|emb|CAP55267.1| putative A/G-specific adenine glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 354
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 17/210 (8%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + + T +
Sbjct: 8 LLHWYDRHRRTLPWRALPGHSADPYHVWLSEIMLQQTTVTAVIPYYRRFLDRFPTVMDLA 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +G Y + + + P + GL LPG+G A I
Sbjct: 68 RAESDTVMAAWAGLGYYARARNLH---DCARVVAAAGRFPDDMPGLLALPGVGAYTAAAI 124
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-------NKVEQSLLRIIPPKHQYNAHYW 197
++AFG P + VD ++ R+++R+ P + +
Sbjct: 125 AAIAFGRPVVPVDGNVERVTSRLFALSDPLPAARKSIARQAATLNQSAEAQARPSDFAQA 184
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L G VC R P C C C +Q
Sbjct: 185 LFDLGAGVCTPRSPACALCPWREACAGFRQ 214
>gi|149035564|gb|EDL90245.1| mutY homolog (E. coli), isoform CRA_b [Rattus norvegicus]
Length = 451
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 71/221 (32%), Gaps = 30/221 (13%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRRNLLSWYDQEKRDLPWRKRVKEEANLDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+++ +G Y + ++ +
Sbjct: 122 RW--------------MQEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQ 167
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRII 186
LPG+GR A I S+AF T VD ++ R+ R+ + + +++
Sbjct: 168 LLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLV 227
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + + + G VC ++P C C + +LC+ ++
Sbjct: 228 DPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAHQR 268
>gi|315637801|ref|ZP_07892993.1| A/G-specific adenine glycosylase [Campylobacter upsaliensis JV21]
gi|315482144|gb|EFU72756.1| A/G-specific adenine glycosylase [Campylobacter upsaliensis JV21]
Length = 332
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 10/213 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYYVN-------HFTLIVAVLLSAQSTDVNV-NKAT 70
+ +E++ + + + L + N + + ++ ++ Q+ V +
Sbjct: 1 MQKEMIEKLQKNLLKWYENNGRKTLPWRNLQNDINRAYAVYISEIMLQQTQVKVVLERFY 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ T + E +L + +G Y ++ N+ + + EF +P+ + L
Sbjct: 61 FPFLQKFPTLLSLANAKEDELLKAWQGLGYYS-RARNLKKAARQCVAEFGGLLPRKKDDL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+L GIG A + + VD +I R+ R+ + ++E ++ K
Sbjct: 120 LKLCGIGAYTAGAVACFGYDACESFVDANISRVLKRLFALQNPSQKELELKARLLLNKKE 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+N + L+ G +C + P+C+ C ++ CK
Sbjct: 180 SFNHNQALLDVGALLCLPKNPKCKLCPLNAFCK 212
>gi|289672233|ref|ZP_06493123.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. syringae
FF5]
Length = 250
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E + Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPSVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
GI +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|262403922|ref|ZP_06080479.1| A/G-specific adenine glycosylase [Vibrio sp. RC586]
gi|262349884|gb|EEY99020.1| A/G-specific adenine glycosylase [Vibrio sp. RC586]
Length = 353
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLARFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|300921304|ref|ZP_07137673.1| A/G-specific adenine glycosylase [Escherichia coli MS 115-1]
gi|300411766|gb|EFJ95076.1| A/G-specific adenine glycosylase [Escherichia coli MS 115-1]
Length = 350
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVGLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|70934485|ref|XP_738462.1| endonuclease III [Plasmodium chabaudi chabaudi]
gi|56514702|emb|CAH82012.1| endonuclease iii homologue, putative [Plasmodium chabaudi chabaudi]
Length = 272
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++ LLS+++ D L + T + +L E++L+ I IG Y KS+ I
Sbjct: 78 FQTLISCLLSSRTKDEVTAMVMDRLKKHGLTVENILNTPEEELKKLIYGIGFYNVKSKQI 137
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
I + IL ++++ IP + E L +LPGIG K + +IL A I VD H+ RISNR+
Sbjct: 138 IQICKILKEKYNSDIPHSYEELMKLPGIGEKVSQLILQTALNKHEGIAVDIHVHRISNRL 197
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + + L + + ++ LV G+ +CK +KP C+ C I++ C+
Sbjct: 198 NWVYTKNESDTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEKCTITDYCQYY 255
>gi|302187481|ref|ZP_07264154.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. syringae
642]
Length = 355
Score = 98.1 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPYSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERSCEA 210
>gi|238897586|ref|YP_002923265.1| adenine DNA glycosylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465343|gb|ACQ67117.1| adenine DNA glycosylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 364
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + + L + + + ++ ++ Q+ V V +
Sbjct: 2 QAKKFSEMLVNWYHQHGRKTLPWQLNKTPYRVWLSEVMLQQTQVVTVIPYFQRFVTRFPN 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + ++ + +G Y ++ N+ + + + + P + LPGIGR
Sbjct: 62 IKALAQASLDEVLHLWTGLGYYA-RARNLHKAAQTIFAQHQGQFPLAFSDIIALPGIGRS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP----KHQYNA 194
A ILS+A G +D ++ R+ R G K VEQ+L +
Sbjct: 121 TAGAILSLAMGQSFPILDGNVKRVLARCYAIEGWPNKKEVEQTLWNLSEERMLLSDAAAF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C P+C C + C
Sbjct: 181 NQAMMDLGAMICTRSTPKCTICPLQIGCLAF 211
>gi|225374919|ref|ZP_03752140.1| hypothetical protein ROSEINA2194_00542 [Roseburia inulinivorans DSM
16841]
gi|225213240|gb|EEG95594.1| hypothetical protein ROSEINA2194_00542 [Roseburia inulinivorans DSM
16841]
Length = 371
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 11/219 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ T L+ + + L + + + V+ ++ Q+ V + +
Sbjct: 1 MITDFNLQILIEPLLHWFAGHARVLPWREEPTPYRVWVSEIMLQQTRVEAVKPYFERFTK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E +L +G Y + N+ + ++ E+ K+P E L +L G
Sbjct: 61 RLPDVEALAECPEDELLKLWEGLGYYN-RVRNMQKAAVQVMEEYGGKLPADYEKLLKLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPP-K 189
IG A I S+A+ IP VD ++FRI R + + +E+ L ++ +
Sbjct: 120 IGSYTAGAIASIAYQIPVPAVDGNVFRILTRVSADDTDIMKPSFRSLLEKELREVMQGME 179
Query: 190 HQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
+ L+ G VC P C+ C + LC K+
Sbjct: 180 MPGAFNQALMELGATVCVPNGAPLCEQCPWNRLCLARKE 218
>gi|326328758|ref|ZP_08195094.1| putative A/G-specific adenine glycosylase [Nocardioidaceae
bacterium Broad-1]
gi|325953380|gb|EGD45384.1| putative A/G-specific adenine glycosylase [Nocardioidaceae
bacterium Broad-1]
Length = 299
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 80/208 (38%), Gaps = 11/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ + + +L + ++++V+ + Q+ V + E TP
Sbjct: 12 VTELHDAVLDWYDANARDLPWRSATATPWSVMVSEFMLQQTPVSRVLPIHEAWLERWPTP 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G R+ + + + ++ + ++P + + L LPG+G
Sbjct: 72 ADLAADSTGEAVRAWGRLGYPRRALR-LHAAATAIVEQHGGEVPDSYDELIALPGVGDYT 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYN--A 194
A I + A+G + +DT++ R+ R V ++ + +P
Sbjct: 131 AAAIATFAYGKRHVVLDTNVRRVFARTLSGVEFPAQSVNKAERELAAGVLPHDEPTAATW 190
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC A P C C +++ C
Sbjct: 191 SVAVMELGALVCTAANPSCARCPVTDQC 218
>gi|94986609|ref|YP_594542.1| A/G-specific DNA glycosylase [Lawsonia intracellularis PHE/MN1-00]
gi|94730858|emb|CAJ54221.1| A/G-specific DNA glycosylase [Lawsonia intracellularis PHE/MN1-00]
Length = 363
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
++EI + K L + + + +A ++ Q+ + +
Sbjct: 1 MKEIQQALLNWFYKNKRALPWRETYLPYHVWIAEVMMQQTQMDRGVEYFLRWIKQFPDIA 60
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E+KL + +G YR + ++ S + +++++++ P+ E + LPGIG A
Sbjct: 61 SVAYAPEEKLLSAWEGLGYYR-RVRHLQSAAQVIMHKYNGTFPERYEDILELPGIGPYTA 119
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHY 196
I S AF +D ++ R+ +RI K+ + +++P K+ + +
Sbjct: 120 GAIASTAFNQDFPCIDGNVERVLSRIFDINTHIKKEPTKSKLYDLVKQLMPKKNARDFNQ 179
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G VCK +KP C C + ++C
Sbjct: 180 SVMELGALVCK-KKPMCLICPVYSMCNS 206
>gi|294338793|emb|CAZ87127.1| adenine DNA glycosylase [Thiomonas sp. 3As]
Length = 371
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 8/223 (3%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVN 67
+P P + + + + + + ++ ++ Q+ V
Sbjct: 2 PDSAPAAPFTAPTLPDFASRLV-RWQRQHGRHDLPWPVRDPYRVWLSEIMLQQTQVATVI 60
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+ T Q + A E + +G Y+ ++ N+ + I++ PQT
Sbjct: 61 DYYARFTALFPTVQALAAAPEDAVLAAWSGLGYYQ-RARNLHRCAQIVVQTHGGAFPQTA 119
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSL 182
E L LPGIG A+ I + F +D ++ R+ R P K+
Sbjct: 120 ESLAALPGIGPSTASAIAAFCFDERAAILDGNVQRVLCRSHGIDDPVPATATTRKLWSLA 179
Query: 183 LRIIPPK-HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++P L+ G VC+ R+P C C + C+
Sbjct: 180 RSLLPEAQDMAAYTQGLMDLGATVCRPRQPACTECPFATDCRA 222
>gi|261335170|emb|CBH18164.1| A/G-specific adenine glycosylase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 454
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 11/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + V+ ++S Q+ V K + + E + +G YR+
Sbjct: 50 TDPYHVWVSEVMSQQTQMDTVIPYFKRWIAVFPDIATLARATEASVMAVWSGMGYYRRAL 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + ++ F +P T L +PGIG + I S+ F I VD ++ R+ +
Sbjct: 110 -YLKKGAEHVMKHFGGSLPTTAAQLRAIPGIGLYTSAAIASICFRERIISVDGNVVRVLS 168
Query: 166 RIGLAPGKTP------NKVEQSLLRII---PPKHQYNAHYWLVLHGRYVCKAR-KPQCQS 215
R+ P +V I+ P + + L+ G VCK +P C+
Sbjct: 169 RLRCERNFDPKSAKSIKEVFHWGQEIMGEGPCDRPGDFNQGLMEIGARVCKPSGRPLCEE 228
Query: 216 CIISNLCKRI 225
C + C
Sbjct: 229 CPLHRYCGAY 238
>gi|330961857|gb|EGH62117.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 355
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E T Q + E
Sbjct: 12 DWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMEALPTVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ D + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVAYHDGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G+ +D ++ R+ R G ++ + R P N ++ G
Sbjct: 131 GLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPYSRVNNYTQAMMDLGAT 190
Query: 205 VCKARKPQCQSCIISNLCKR 224
+C KP C C + C+
Sbjct: 191 LCTRSKPSCLLCPLERGCQA 210
>gi|313158606|gb|EFR58000.1| A/G-specific adenine glycosylase [Alistipes sp. HGB5]
Length = 364
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 80/222 (36%), Gaps = 9/222 (4%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVN 65
S C + + ++ I + + +L + + + + ++ ++ Q+
Sbjct: 4 SNIEPKRENCYFCRQNMDNISDILLDWYARHGRDLPWRRTRDPYRIWLSEVILQQTRVAQ 63
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
E + A E ++ + +G Y ++ N+ + + + F P+
Sbjct: 64 GMDYYLRFTERFPDVGSLAAAPEDEVLKLWQGLGYYS-RARNLHAAARQVAARFGGVFPR 122
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR- 184
+ + + L G+G A + S A+ P +D ++FR+ R+ + +
Sbjct: 123 SYDEVRSLRGVGDYTAAAVCSAAYDAPCAVLDGNVFRVLARLFDIDLPIDSTAGKRTFAE 182
Query: 185 ----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + + ++ G C +P C C +++ C
Sbjct: 183 LAQMRLDKRCPGRYNQAVMDFGALQCTPAQPGCADCPLASRC 224
>gi|324994487|gb|EGC26400.1| A/G-specific adenine glycosylase [Streptococcus sanguinis SK678]
Length = 386
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWGADKIASFREKLLTWYDENKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMTDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQTMMEILIDPCR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPVNPHPEDSPVKEF 220
>gi|262282805|ref|ZP_06060572.1| A/G-specific adenine glycosylase [Streptococcus sp. 2_1_36FAA]
gi|262261057|gb|EEY79756.1| A/G-specific adenine glycosylase [Streptococcus sp. 2_1_36FAA]
Length = 382
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ ++ + K +L + N + + V+ ++ Q+ V + +
Sbjct: 11 MWEAGKIASFREKLLTWYDKNKRDLPWRRTNNPYHIWVSEIMLQQTRVDTVIPYYERFLD 70
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L +G Y + N+ + ++ +F K P + EG+ L G
Sbjct: 71 WFPTVADLAQAPEDRLLKAWEGLGYYS-RVRNMQKAAQQIMIDFAGKFPDSYEGIASLKG 129
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLR-IIPPKH 190
IG A I S+AFG+ VD ++ R+ +R+ + KV Q+++ +I P
Sbjct: 130 IGPYTAGAIASIAFGLAEPAVDGNVMRVLSRLFEVDLDIGQPSNRKVFQAMMEILIDPDR 189
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + L+ G + P + +
Sbjct: 190 PGDFNQALMDLGSDIEAPLNPHPEDSPVKEF 220
>gi|317404435|gb|EFV84851.1| A/G-specific adenine glycosylase [Achromobacter xylosoxidans C54]
Length = 355
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + + + A ++ + Y
Sbjct: 16 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYERFLQRFPDVAALAAAAQEDVMPYWA 75
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + +++ + P + E + LPGIGR A I + A+G + +
Sbjct: 76 GLGYYA-RARNLHRCAQEIARDWNGRFPPSAEAIATLPGIGRSTAAAIAAFAYGERSPIL 134
Query: 157 DTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPK-------HQYNAHYWLVLHGRYVCKA 208
D ++ R+ G+A ++EQ L + + L+ G +C
Sbjct: 135 DGNVKRVFTRHFGIAGDPARREIEQRLWALADAQVEAAPGLDMAAYTQGLMDLGATLCTR 194
Query: 209 RKPQCQSCIISNLCKRIKQ 227
KP C+ C +++ C ++
Sbjct: 195 GKPACERCPVADTCVARRE 213
>gi|297159386|gb|ADI09098.1| adenine glycosylase [Streptomyces bingchenggensis BCW-1]
Length = 306
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + +P + A
Sbjct: 26 DWFDAHARDLPWRRPEAGPWGVMVSEFMLQQTPVNRVLPVYEQWLARWPSPAHLAAEPPG 85
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + ++P L LPG+G A + S A+
Sbjct: 86 EAVRAWGRLGYPRRALR-LHGAAVAIRERHGGQVPTEHAELLALPGVGEYTAAAVASFAY 144
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQY--NAHYWLVLHGR 203
G +DT++ R+ R P+ + ++P + G
Sbjct: 145 GQRHAVMDTNVRRVFARAVGGREFPPDATTAAERKLARALLPDDDPTAARWAAATMELGA 204
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P C C I+ C
Sbjct: 205 LVCTARTPDCVRCPITAQC 223
>gi|82596217|ref|XP_726170.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23481466|gb|EAA17735.1| Drosophila melanogaster CG9272 gene product [Plasmodium yoelii
yoelii]
Length = 386
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++ LLS+++ D L + + +L E++L+ I IG Y KS+ I
Sbjct: 192 FQTLISCLLSSRTKDEVTAMVMGRLKKHGLNVENILKTSEEELKKLIYGIGFYNVKSKQI 251
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
I + IL ++++ IP E L +LPGIG K + +IL A I VD H+ RISNR+
Sbjct: 252 IKICQILKEKYNSDIPHNYEELIKLPGIGEKVSQLILQTALNKHEGIAVDIHVHRISNRL 311
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + L + + ++ LV G+ +CK +KP C+ C +++ C+
Sbjct: 312 NWVYTKNEADTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEKCTLTDYCQYY 369
>gi|301168329|emb|CBW27919.1| putative A/G-specific adenine glycosylase [Bacteriovorax marinus
SJ]
Length = 348
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 86/212 (40%), Gaps = 13/212 (6%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+F L + + + +V+ ++ Q+T V + T + +
Sbjct: 1 MFKKLLKWSSEQHSHLPWRENRSLYLTLVSEIMLQQTTVQTVVNHIDRFLKKYPTLKSLA 60
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
E+++ + +G YR ++ N++S + + + KIP ++ L + GIG AN I
Sbjct: 61 QSNEEEVCIAWKGLGYYR-RARNLLSAAQDIQLNYGGKIPTDIDTLKSIKGIGDYTANAI 119
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP---------PKHQYNAH 195
+ + G + VD ++ R+ RI + K+++ + + + +
Sbjct: 120 IGIGAGKRALAVDANLERVIARIYAIDIEKGVKLQKEIYKRFYNGEILKELTDNNSRELN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ GR +C+ARK C C + C K+
Sbjct: 180 EAFMDLGRVICQARKADCVLCPVKRSCLSFKE 211
>gi|134096047|ref|YP_001101122.1| adenine DNA glycosylase [Herminiimonas arsenicoxydans]
gi|133739950|emb|CAL63001.1| A/G-specific adenine glycosylase [Herminiimonas arsenicoxydans]
Length = 391
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 9/194 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V T + A +++ +
Sbjct: 49 RHALPWQNTRDPYRVWLSEIMLQQTQVAAVIPYYLRFLASFPTVASLAAAPSEEVMAHWS 108
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++ P L +LPGIGR A I + ++G +
Sbjct: 109 GLGYYS-RARNLHKCAQAIVSMHGGVFPGDPVLLEQLPGIGRSTAAAIAAFSYGTRAAIL 167
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R+ K VE L ++P + L+ G +C +P
Sbjct: 168 DGNVKRVFARVFGVERYPGEKAVENELWLRAVALLPEAGVESYTQGLMDLGATLCTRNRP 227
Query: 212 QCQSCIISNLCKRI 225
C C + C
Sbjct: 228 SCNRCPLVQRCVAY 241
>gi|68067789|ref|XP_675828.1| endonuclease III [Plasmodium berghei strain ANKA]
gi|56495233|emb|CAH95547.1| endonuclease iii homologue, putative [Plasmodium berghei]
Length = 246
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++ LLS+++ D L + + +L E++L+ I +G Y KS+ I
Sbjct: 54 FQTLISCLLSSRTKDEVTAMVMDRLKKHGLNVENILKTPEEELKKLIFGVGFYNVKSKQI 113
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
I + IL ++++ IP E L +LPGIG K + +IL A I VD H+ RISNR+
Sbjct: 114 IKICQILKEKYNSDIPHNYEELIKLPGIGEKVSQLILQTALNKHEGIAVDIHVHRISNRL 173
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K + L + + ++ LV G+ +CK +KP C C +++ C+
Sbjct: 174 NWVYTKNELDTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCGKCTLTDYCQYY 231
>gi|319795623|ref|YP_004157263.1| a/g-specific adenine glycosylase [Variovorax paradoxus EPS]
gi|315598086|gb|ADU39152.1| A/G-specific adenine glycosylase [Variovorax paradoxus EPS]
Length = 355
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ EL + + + + ++ ++ Q+ V E + + A E ++
Sbjct: 28 RSELPWQNTRDPYRVWLSEVMLQQTQVTTVLGYFARFLERFPDVKALAAGTEDEVFGRWS 87
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ F + P T L LPGIGR + I + FG +
Sbjct: 88 GLGYYS-RARNMHRCAQEVVERFGGEFPHTAAELVTLPGIGRSTSAAIAAFCFGERVAIL 146
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYN----AHYWLVLHGRYVCK 207
D ++ R+ R+ G + ++ L +++PP + ++ G VC
Sbjct: 147 DGNVKRVLTRVLGFGGDMSSSAQERALWDVATQLLPPAEEREAIASYTQGVMDLGATVCL 206
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
RKP C C ++ +C +++
Sbjct: 207 PRKPSCMICPVNKICVGLRE 226
>gi|50954465|ref|YP_061753.1| adenine glycosylase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950947|gb|AAT88648.1| adenine glycosylase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 289
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + + +V+ + Q+ V + TP + A+
Sbjct: 11 DWYHANRRDLPWRRAGFIAWGTLVSEFMLQQTPVSRVIPRLEEWLARWPTPADLAAVPPG 70
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ R++G R+ + S + + + +P ++ L LPG+G A + A+
Sbjct: 71 EAVRAWRSLGYPRRAL-WLHSAAVAIAEQHGGVVPDDVDALLALPGVGDYTARAVAVFAY 129
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQS---LLRIIPPKHQYN--AHYWLVLHGR 203
G VDT+I R+ R G+ P ++ + ++P + ++ G
Sbjct: 130 GNRHPVVDTNIRRVIARAVEGQGEPGPPSAKRDLAAMEALLPRDRPAAAAFNAGMMELGA 189
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C C ++ C
Sbjct: 190 LVCVARTPRCDVCPLAAAC 208
>gi|27065216|pdb|1KG7|A Chain A, Crystal Structure Of The E161a Mutant Of E.Coli Muty (Core
Fragment)
Length = 225
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K + ++ P + ++ G +C KP+C C + N
Sbjct: 147 RCYAVSGWPGKKEVANKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|229495517|ref|ZP_04389250.1| A/G-specific adenine glycosylase [Porphyromonas endodontalis ATCC
35406]
gi|229317500|gb|EEN83400.1| A/G-specific adenine glycosylase [Porphyromonas endodontalis ATCC
35406]
Length = 357
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 16/210 (7%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+++ + EL + + + + ++ ++ Q+ + E +
Sbjct: 10 QQLARALVDWFEENARELPWRTTRDPYHIWLSEVILQQTRVNQGHDYFLRFVEAFPSVTD 69
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ + + +G Y ++ N+ + ++ E P+ + LPG+G A
Sbjct: 70 LAQASEDQVLSLWQGLGYYS-RAHNLHRAAQVIATEHQGIFPKDFALIRALPGVGDYTAG 128
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLA---------PGKTPNKVEQSLLRIIPPKHQYN 193
I S AF +P VD ++ R+ +R+ + VE+ L +PP
Sbjct: 129 AIASFAFDMPYPAVDGNVLRVVSRLLASELPIDTLSGKQLCTQAVEELLATQLPPSKLG- 187
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G VC + PQC +C S+ C+
Sbjct: 188 --QALIELGALVCTPQSPQCSACPASSWCR 215
>gi|320159427|ref|YP_004172651.1| putative DNA glycosylase [Anaerolinea thermophila UNI-1]
gi|319993280|dbj|BAJ62051.1| putative DNA glycosylase [Anaerolinea thermophila UNI-1]
Length = 237
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 23 KELEEIFYLFSLKW--PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + ++ L + P + L +V+ +LS + D N + A + L E T
Sbjct: 11 ERAQTVYRLLEAAYGIPEWRNPLP---PLDELVSTILSQNTNDRNRDLAYQRLRERFPTW 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE---------FDNKIPQTLEGLT 131
+ + +++ IR G+ +K + + + E D + L
Sbjct: 68 EDVRDAPLEQVIEAIRPAGLANQKGARLQEVLRQITAERGGLDLSFLQDLPAEEARTWLL 127
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKH 190
R G+G K A+++L + P VDTH+ R+S RIGL P + + L ++ P+
Sbjct: 128 RFKGVGVKTASIVLLFSLNKPAFPVDTHVHRVSGRIGLRPPQMSAEDAHAYLAQVFTPEQ 187
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H L+ GR VC ARKP C C + +C+
Sbjct: 188 YAAGHLNLIRLGREVCHARKPACPRCPLRAVCEW 221
>gi|330812766|ref|XP_003291289.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
gi|325078539|gb|EGC32185.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
Length = 235
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V LLS+Q+ D + A L E + +L +KL+ I +G YR+K+ +
Sbjct: 39 FHILVGCLLSSQTKDQVTHAAMVRLKEYGLNVETVLKTPNEKLETLIHPVGFYRRKAVYL 98
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
S++ IL +++ IP T + + LPGIG K N+I+ +A+G I VD H+ RI NR+
Sbjct: 99 KSIAEILKEKYNGDIPPTFKEIEALPGIGPKMTNLIVQIAWGRVEGIAVDVHMHRICNRL 158
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G TP + + L +P + ++ LV G+ +C +P+C SC ++NLC
Sbjct: 159 GWVKTNTPEETMRQLESWLPREKWGQVNHLLVGFGQTICDPVRPKCSSCTVNNLCP 214
>gi|45358100|ref|NP_987657.1| endonuclease III-like protein [Methanococcus maripaludis S2]
gi|44920857|emb|CAF30093.1| endonuclease III homologue [Methanococcus maripaludis S2]
Length = 356
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++SA++ D K +K LF+ P+ ++ I +L+ + G Y+ K++N
Sbjct: 38 AFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDELEKLVHPAGFYKTKAKN 97
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L ILI+++++ +P ++E L LPG+GRK AN+++++AF I VDTH+ RI+NR
Sbjct: 98 LKKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRW 157
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
A ++P E L + +P + + LV+ G+ C P+C C I +C
Sbjct: 158 YYADTESPENTEMDLRKKLPKNYWKKINNLLVVFGQETCSPI-PKCDKCFSEIKKICPHY 216
>gi|209544178|ref|YP_002276407.1| A/G-specific adenine glycosylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531855|gb|ACI51792.1| A/G-specific adenine glycosylase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 354
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 17/210 (8%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V + + T +
Sbjct: 8 LLHWYDRHRRTLPWRALPGHSADPYHVWLSEIMLQQTTVTAVIPYYRRFLDRFPTVVDLA 67
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +G Y + + + P + L LPG+G A I
Sbjct: 68 QADSDTVMAAWAGLGYYARARNLH---DCARVVAAAGRFPDDMPRLLALPGVGAYTAAAI 124
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-------NKVEQSLLRIIPPKHQYNAHYW 197
++AFG P + VD ++ R+++R+ P + +
Sbjct: 125 AAIAFGRPVVPVDGNVERVTSRLFALSDPLPGARKSIARQAATLNHSAEAQARPSDFAQA 184
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L G VC R P C C C +Q
Sbjct: 185 LFDLGAGVCTPRSPACALCPWREACAGFRQ 214
>gi|258620714|ref|ZP_05715749.1| A/G-specific adenine glycosylase [Vibrio mimicus VM573]
gi|258586912|gb|EEW11626.1| A/G-specific adenine glycosylase [Vibrio mimicus VM573]
Length = 369
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 42 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 101 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 160
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 161 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 220
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 221 FCLAKQQ 227
>gi|260061541|ref|YP_003194621.1| A/G-specific adenine glycosylase [Robiginitalea biformata HTCC2501]
gi|88785673|gb|EAR16842.1| A/G-specific adenine glycosylase [Robiginitalea biformata HTCC2501]
Length = 356
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 9/197 (4%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + + + ++ ++ Q+ + E + E++
Sbjct: 16 EWYRIHQRDLPWRGSRDPYAVWLSEIIMQQTRVAQGTPYYRRFLERFPEVSDLATASEEE 75
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + + + E+ K P++ +GL LPG+G A I S+ F
Sbjct: 76 VLKLWQGLGYYS-RARNLHAAARKVAFEWGGKFPESYKGLLELPGVGPYTAAAIASICFE 134
Query: 151 IPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+P VD ++FR+ +R G +Q ++ P + L+ G
Sbjct: 135 LPHPVVDGNVFRVLSRYFDVDIPVDTGPGRRHFDQLAREVMDPGQIGRYNQALMEFGALQ 194
Query: 206 CKARKPQCQSCIISNLC 222
C P C SC + C
Sbjct: 195 CVPANPDCASCPLVQSC 211
>gi|76788822|ref|YP_327908.1| A/G-specific adenine DNA glycosylase [Chlamydia trachomatis
A/HAR-13]
gi|237802538|ref|YP_002887732.1| putative DNA glycosylase [Chlamydia trachomatis B/Jali20/OT]
gi|237804455|ref|YP_002888609.1| putative DNA glycosylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|76167352|gb|AAX50360.1| A/G-specific adenine DNA glycosylase [Chlamydia trachomatis
A/HAR-13]
gi|231272755|emb|CAX09660.1| putative DNA glycosylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273772|emb|CAX10554.1| putative DNA glycosylase [Chlamydia trachomatis B/Jali20/OT]
Length = 368
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|21243286|ref|NP_642868.1| A/G-specific adenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21108824|gb|AAM37404.1| A/G-specific adenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 357
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + +L + + + ++ ++ Q+ V
Sbjct: 10 AHAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVVIPYFHKFMARFPAL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G Y ++ N+ + + + ++P+ + L LPGIGR
Sbjct: 70 ADLAAADNDTVMAQWAGLGYYA-RARNLHAAAKQCVALHGGQVPRDFDALLALPGIGRST 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQS-------LLRIIPPKHQY 192
A ILS A+ +D ++ R+ + G+A +E+ + +P
Sbjct: 129 AGAILSQAWNDRFAIMDGNVKRVLTRFHGIAGYPGLPAIEKQLWQHAIIHVAHVPAGRLA 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + G +C KP C C + C +
Sbjct: 189 DYTQAQMDFGATLCTRAKPACVLCPLQTDCIARR 222
>gi|160900859|ref|YP_001566441.1| A/G-specific adenine glycosylase [Delftia acidovorans SPH-1]
gi|160366443|gb|ABX38056.1| A/G-specific adenine glycosylase [Delftia acidovorans SPH-1]
Length = 356
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 73/190 (38%), Gaps = 10/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + A + + +G Y ++
Sbjct: 28 RDPYRVWLSEIMLQQTQVSTVLGYYQRFLDAFPDVASLAAAPQDAVLALWSGLGYYS-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ ++ P+ E L LPGIGR A I S F +D ++ R+
Sbjct: 87 RNLHRCAQAVVQDWGGAFPRRAEDLATLPGIGRSTAGAIASFCFSERVPILDANVRRVLT 146
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + ++ ++ P + L+ G +C RKP C C
Sbjct: 147 RVLAFDADLAVARNERELWDLAQQLCPTEDLQQAMPRYTQGLMDLGATICTPRKPSCLVC 206
Query: 217 IISNLCKRIK 226
+ C+ +
Sbjct: 207 PLQPQCRAAR 216
>gi|312142616|ref|YP_003994062.1| HhH-GPD family protein [Halanaerobium sp. 'sapolanicus']
gi|311903267|gb|ADQ13708.1| HhH-GPD family protein [Halanaerobium sp. 'sapolanicus']
Length = 205
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+I + + + K + + N F +++A L ++ NV K + + +P+ +
Sbjct: 8 KISDILLEWYVNNKRDYPWRETDNSFHVLIAELFLQRTRSDNVVKVYREFIDNFGSPKDI 67
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L ++++ ++ +G+ ++ E + + E D + T + L+++ G+G N
Sbjct: 68 LEADKEEIMGHLSHLGLQNRRYEVL-KNICLAYEEKDQENFFTKDVLSKIDGLGDYIVNA 126
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
L VDT+ RI R G ++VE L+ I+P +Y L+
Sbjct: 127 TLCFGEEKRLPIVDTNTSRIVKRF---YGIDKHEVESKLVEILPNDRYVEFNYALLDFAS 183
Query: 204 YVCKARKPQCQSCIISNLCKR 224
+CKA P+C C+IS+ C
Sbjct: 184 LICKALSPKCSECLISSDCSY 204
>gi|300313203|ref|YP_003777295.1| A/G-specific adenine glycosylase [Herbaspirillum seropedicae SmR1]
gi|300075988|gb|ADJ65387.1| A/G-specific adenine glycosylase protein [Herbaspirillum
seropedicae SmR1]
Length = 378
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A + +
Sbjct: 38 RHKLPWQNTRDAYRVWLSEIMLQQTQVAAVIPYYQRFLERCPDVFALAAAPSEDVMALWS 97
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ ++ + P + L LPGIGR A I + ++G +
Sbjct: 98 GLGYYT-RARNLHKCAQRVVEQYGGRFPDDPDLLADLPGIGRSTAAAIAAFSYGRRAAIL 156
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R+ G K +E L ++P + + L+ G +C KP
Sbjct: 157 DGNVKRVFARVFGIDGYPGAKPIEDKLWLRAVALLPDQDIESYTQGLMDLGATLCVRGKP 216
Query: 212 QCQSCIISNLCKRIKQ 227
C+ C ++ C + Q
Sbjct: 217 ACERCPLAGRCVALAQ 232
>gi|261210029|ref|ZP_05924327.1| A/G-specific adenine glycosylase [Vibrio sp. RC341]
gi|260840794|gb|EEX67336.1| A/G-specific adenine glycosylase [Vibrio sp. RC341]
Length = 353
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQTVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|187479533|ref|YP_787558.1| A/G-specific adenine glycosylase [Bordetella avium 197N]
gi|115424120|emb|CAJ50673.1| A/G-specific adenine glycosylase [Bordetella avium 197N]
Length = 355
Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 79/212 (37%), Gaps = 10/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + + + + + + ++ ++ Q+ V + Q
Sbjct: 2 QFAALIADWQARHGRHRLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYERFLARFPDVQT 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A ++++ Y +G Y ++ N+ + ++ + P + LPGIGR A
Sbjct: 62 LAAASQEEVMPYWAGLGYYA-RARNLHRCAQDIVAHWGGAFPPDAARIASLPGIGRSTAA 120
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI-------IPPKHQYNA 194
I + A+G + +D ++ R+ R G EQ+L + +P
Sbjct: 121 AIAAFAYGERSPIMDGNVKRVFARHFGIEGDPSRRATEQALWTLAESLVAAVPDLDMTAY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G +C KP C +C ++ C +
Sbjct: 181 TQGLMDLGATLCTRGKPDCTNCPVAATCIARR 212
>gi|260753771|ref|YP_003226664.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553134|gb|ACV76080.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 373
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 13/216 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ EI + L + + + + ++ ++ Q+T +
Sbjct: 1 MQKSAVYREITTDLLNWYQRHARILPWRTEAQQNKVDPYRVWLSEIMLQQTTTAHAAPYY 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
E T + + A E + +G Y + I + K P +GL
Sbjct: 61 LKFVERWPTVEALAAAQEADVMAEWAGLGYYSRARNLIK--CAKEVVASGGKFPDNEQGL 118
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIP 187
LPGIGR A I+++AFG + VD ++ R+ +R+ P + + ++ P
Sbjct: 119 LALPGIGRYTAAAIVAIAFGKRAVVVDANVERVVSRLFAIETPLPASRPIIAEETDKLTP 178
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G +C R+P C C + C+
Sbjct: 179 DLAAGDFAQAMMDIGATICVNRQPTCAICPMMPHCE 214
>gi|256070487|ref|XP_002571574.1| DNA glycosylase [Schistosoma mansoni]
gi|238656718|emb|CAZ27804.1| a/g-specific adenine dna glycosylase (ec 3.2.2.-) (muty
homolog)(mmyh)-related [Schistosoma mansoni]
Length = 302
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 33/233 (14%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV----NH------------------------FTLI 52
T ++E++ L + K +L + N ++
Sbjct: 8 TSNQIEKLRESLLLWYDRSKRDLPWRRMALNPDPNLRGYAGMFDHSLDFVFHILYMCSVW 67
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
V+ ++ Q+ V + + ++ + + + +G Y +
Sbjct: 68 VSEVMLQQTQVKTVIDYYDRWMKKWPSVDQLASASLDDVNSLWSGLGYYSRARLLHKGAQ 127
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
I+ +PG+GR A I S+AF T +D ++ R+ R+
Sbjct: 128 KIVDEFNGIFPQSAEVLKHSIPGVGRYTAGAIASIAFNQCTPVLDGNVIRVLTRLRQIGS 187
Query: 173 KTPNKVEQSLL-----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
L +++ P + + L+ G C + P C C ++
Sbjct: 188 PVQLPTTMEYLWNLTTKLVDPNRPGDFNQALMELGAVCCTPKNPDCIKCPLNK 240
>gi|330807021|ref|YP_004351483.1| A/G-specific adenine glycosylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375129|gb|AEA66479.1| A/G-specific adenine glycosylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 355
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 10/210 (4%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E+ + + +L + + + + V+ ++ Q+ V T
Sbjct: 2 RAEQFSTAVLDWFDRHGRHDLPWQQAISPYRVWVSEIMLQQTQVSTVLNYFDRFMASLPT 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + A E ++ + +G Y ++ N+ + I++ ++ + P+ +E LT LPGIG
Sbjct: 62 VQALAAAPEDEVLHLWTGLGYYT-RARNLQKTAKIVVEQYGGEFPRDVEKLTELPGIGLS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A I S++ G+ +D ++ R+ R G ++ + R P
Sbjct: 121 TAGAIASISMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPQDRVNAY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C KP C C + C+
Sbjct: 181 TQAMMDLGATLCTRSKPSCLLCPLKQGCEA 210
>gi|56552573|ref|YP_163412.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56544147|gb|AAV90301.1| A/G-specific adenine glycosylase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 373
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 79/216 (36%), Gaps = 13/216 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKAT 70
+ EI + L + + + + ++ ++ Q+T +
Sbjct: 1 MQKSAVYREITTDLLNWYQRHARILPWRTEAQQNKVDPYRVWLSEIMLQQTTTAHAAPYY 60
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
E T + + A E + +G Y + I + + P +GL
Sbjct: 61 LKFVERWPTVEALAAAQEADVMAEWAGLGYYSRARNLIK--CAKEVVASGGEFPDNEQGL 118
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIP 187
LPGIGR A I+++AFG + VD ++ R+ +R+ P + + ++ P
Sbjct: 119 LALPGIGRYTAAAIVAIAFGKRAVVVDANVERVVSRLFAIETPLPASRPIIAEETDKLTP 178
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ G +C R+P C C + C+
Sbjct: 179 DLAAGDFAQAMMDIGATICVNRQPTCAICPMMPHCE 214
>gi|297627163|ref|YP_003688926.1| MutY, A/G-specific DNA glycosylase [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296922928|emb|CBL57510.1| MutY, A/G-specific DNA glycosylase [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 292
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 11/213 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
P + + + + +L + + + ++V+ ++ Q+ V + +
Sbjct: 1 MEPGQRRAVVRAVNQWYAHTARDLPWRRVETSPWAIMVSEFMAQQTPVARVVGPWREWLD 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
TP + A +G R+ + + + + + F ++P ++E L +LPG
Sbjct: 61 RWPTPDSLAAEPSSAAVAAWGRLGYPRRALR-LHAAATAVRDHFGGEVPHSVEELRQLPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPKHQ 191
+G A I S AFG + +DT++ R+ R+ +A N + + +P
Sbjct: 120 VGDYTAGAIASFAFGARALVLDTNVRRVLTRLDVARQFPANSTTAAERHLAMGWLPDDAP 179
Query: 192 --YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G VC A P C C + C
Sbjct: 180 TASRWAQASMELGALVCTAANPACDECPVRADC 212
>gi|327402191|ref|YP_004343029.1| A/G-specific adenine glycosylase [Fluviicola taffensis DSM 16823]
gi|327317699|gb|AEA42191.1| A/G-specific adenine glycosylase [Fluviicola taffensis DSM 16823]
Length = 335
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L S + EL + N + + ++ ++ Q+ K +L E +++
Sbjct: 7 LISDWYRLNARELPWRSTKNAYFIWLSEVILQQTRVDQGMKYYLNLIENYPNLKQLADAD 66
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+ + + +G Y ++ N+ + + +E+ + P+T + +L GIG A I S
Sbjct: 67 EESILKLWQGLGYYS-RARNLHKTAQQVRDEYQGEFPKTYSEIIQLKGIGPYTAAAISSF 125
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AF +P VD +++RI +R + + + +IP + ++ G
Sbjct: 126 AFDLPHAVVDGNVYRILSRYYGIDEPIDSTQGKKTFQALADSLIPSSDPALFNQAIMEFG 185
Query: 203 RYVCKARKPQCQSCIISNLC 222
C P C+SC+++ C
Sbjct: 186 AMQCIPNNPNCESCVLNQSC 205
>gi|238028663|ref|YP_002912894.1| A/G-specific adenine glycosylase MutY [Burkholderia glumae BGR1]
gi|237877857|gb|ACR30190.1| A/G-specific adenine glycosylase MutY [Burkholderia glumae BGR1]
Length = 369
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 22/230 (9%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQS 61
++ +PL + +L + + + + ++ ++ Q+
Sbjct: 7 RAAPVAPPTPLHA--------SFARRLIAWQREHGRHDLPWQNTRDPYRIWLSEIMLQQT 58
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
V + + A + +G Y ++ N+ + +++ +
Sbjct: 59 QVSTVVPYYQRFLARFPEVAALAAAPADDVMALWAGLGYYT-RARNLHRCAQVVVEQHGG 117
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQ 180
+ PQT + L LPGIGR A I S AFG +D ++ R+ R+ G K VE
Sbjct: 118 RFPQTPDALAELPGIGRSTAAAIASFAFGARAPILDGNVKRVLARVFGVEGFPGEKRVEN 177
Query: 181 SLL----RIIPPKH----QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + P L+ G +C KP CQ C + C
Sbjct: 178 DMWVLAETLFPRDEDDAGISAYTQGLMDLGATLCGRGKPDCQRCPFAPDC 227
>gi|328867595|gb|EGG15977.1| putative endonuclease III [Dictyostelium fasciculatum]
Length = 405
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V +LS+Q+ D L + T + +LA L+ I + Y++K++ +
Sbjct: 196 FHTLVGCMLSSQTRDEQTYACMNRLRKHGLTIENVLASDTDTLEKLIYPVSFYKRKADYL 255
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ I+ +++ IP + L LPGIG+K N+I+ +A+G I +D H+ RI+NR+
Sbjct: 256 KRICIIMRDKYKGDIPPNFKELLELPGIGQKMTNLIVQVAWGRTEGIAIDVHMHRIANRL 315
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G +TP+K E +L +P + + LV G+ C +P+CQ+C +++LC
Sbjct: 316 GWVHTETPDKTEIALKEWLPFERWDGINKLLVGFGQTTCTPLRPKCQNCKVNHLCP 371
>gi|229587885|ref|YP_002870004.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens SBW25]
gi|229359751|emb|CAY46601.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens SBW25]
Length = 355
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 10/208 (4%)
Query: 26 EEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E+ + + +L + + + V+ ++ Q+ V T +
Sbjct: 4 EQFSEAVLDWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMASLPTVE 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A E ++ + +G Y ++ N+ + I++ E+ + P+ +E LT LPGIG A
Sbjct: 64 ALAAAPEDEVLHLWTGLGYYT-RARNLQKTAKIVVAEYGGEFPRDVEKLTELPGIGLSTA 122
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHY 196
I S++ G+ +D ++ R+ R G ++ + R P
Sbjct: 123 GAIASLSMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHDRVNAYTQ 182
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C KP C C + C+
Sbjct: 183 AMMDMGATLCTRSKPSCLLCPLEKGCEA 210
>gi|159904747|ref|YP_001548409.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
gi|159886240|gb|ABX01177.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
Length = 356
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 102/180 (56%), Gaps = 3/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+ ++SA++ D K +K LF+ +P+ + I ++L+ + G Y+ K++N
Sbjct: 38 AFKILVSTVISARTKDETTAKVSKELFKKVKSPKDLSEISVEELEKLVHPAGFYKTKAKN 97
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L IL+ ++D+KIP ++E L +LPG+GRK AN+++++AF I VDTH+ RI+NR
Sbjct: 98 LKKLGEILLEKYDSKIPNSIEELIKLPGVGRKTANLVMTLAFDEYAICVDTHVHRITNRW 157
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
+ P E L + +P + + LV+ G+ +C P+C C I +C
Sbjct: 158 NYVDTEFPENTEMELRKKLPKDYWKRINNLLVVFGQEICSPI-PKCDKCFSEIREICPHY 216
>gi|326693107|ref|ZP_08230112.1| A/G-specific adenine glycosylase [Leuconostoc argentinum KCTC 3773]
Length = 338
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 83/211 (39%), Gaps = 10/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + +E + + L + + + ++V+ ++ Q+ V + +
Sbjct: 4 WSEETIENFRRTLLDWYDREGRATLPWRVDHDPYRVMVSEIMLQQTQVDTVLPYYERFMQ 63
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + E ++ +G Y + N+ + ++++ P++ + L LPG
Sbjct: 64 ALPTVQDLARAPEAQVLKLWEGLGYYSRAQ-NLQKAARFVVDDLHGHWPESADDLQVLPG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
+G + I S++FG VD + +R+ +R +A K+ ++L I+ P
Sbjct: 123 VGPYTSAAIASISFGEVVPAVDGNAYRVFSRLLKIDADIAQPKSRKVFYDAILPIVDPDR 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A+ P +
Sbjct: 183 PGDFNQAIMDLGSSYMTAKNPNSADSPVRAF 213
>gi|298252264|ref|ZP_06976067.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
gi|297546856|gb|EFH80724.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
Length = 242
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ LE ++ L + P E + + +V +LS ++D+N +A L E T ++
Sbjct: 9 EHLERVYDLLIGYYGEPAWEPDH-DPLGGLVGTILSQHTSDINSGRAYHQLIERFSTWEE 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD------------------NKIP 124
+ ++ I++ G+ K+ I S H L +
Sbjct: 68 VRDAPTHEVAEAIKSGGLANVKAPRIQSALHTLSEWQRAKGDTRSLSAFLQDELKGQPLE 127
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLL 183
+ L ++PG+G K A +L G P + +DTH+ R+++R+GL K ++ L
Sbjct: 128 EAWRYLQQMPGVGPKTAACVLLFNMGRPLMPIDTHLHRLTHRLGLIGPKVSADQAHTIFL 187
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ +PP+ Y H L+ HGR +C A++P+C C + + C
Sbjct: 188 KALPPEWAYTLHVNLIRHGRTICHAQRPKCPQCPLLSECAY 228
>gi|23465774|ref|NP_696377.1| A/G-specific adenine glycosylase [Bifidobacterium longum NCC2705]
gi|189439830|ref|YP_001954911.1| A/G-specific DNA glycosylase [Bifidobacterium longum DJO10A]
gi|227546388|ref|ZP_03976437.1| A/G-specific adenine glycosylase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|317482583|ref|ZP_07941598.1| A/G-specific adenine glycosylase [Bifidobacterium sp. 12_1_47BFAA]
gi|322688608|ref|YP_004208342.1| adenine glycosylase [Bifidobacterium longum subsp. infantis 157F]
gi|322690594|ref|YP_004220164.1| adenine glycosylase [Bifidobacterium longum subsp. longum JCM 1217]
gi|23326463|gb|AAN25013.1| probable A/G-specific adenine glycosylase [Bifidobacterium longum
NCC2705]
gi|189428265|gb|ACD98413.1| A/G-specific DNA glycosylase [Bifidobacterium longum DJO10A]
gi|227213369|gb|EEI81241.1| A/G-specific adenine glycosylase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|316916005|gb|EFV37412.1| A/G-specific adenine glycosylase [Bifidobacterium sp. 12_1_47BFAA]
gi|320455450|dbj|BAJ66072.1| putative adenine glycosylase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320459944|dbj|BAJ70564.1| putative adenine glycosylase [Bifidobacterium longum subsp.
infantis 157F]
Length = 328
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 89/244 (36%), Gaps = 46/244 (18%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V E + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMERWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ +G R+ + + ++ ++ +K+P+T + LT LPGIG A+
Sbjct: 66 AEAPKAEVITAWGRLGYPRRALR-LQECARVVAEDYADKLPRTYDELTALPGIGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPP----------- 188
++S AFG +DT+I R+ +R+ L R++P
Sbjct: 125 VMSFAFGERIAVIDTNIRRVLSRVFLGVESRGGATSPAERALANRMLPKDEILGCDADVA 184
Query: 189 -------------------------KHQY-NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++ G +C A+ P C +C I++ C
Sbjct: 185 DNAGSAEHVVNSTIRGGKRSRLHRGERPSVTWNQSVMELGAVICTAKSPLCDTCPIADDC 244
Query: 223 KRIK 226
+K
Sbjct: 245 AFLK 248
>gi|198474869|ref|XP_002132792.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
gi|198138583|gb|EDY70194.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L TP + + +L+ + + Y+ K++ +
Sbjct: 205 FQKLVALMLSSQTKDQTTYEAMNRLKARTLTPDSLKDMPIGELETLLHPVSFYKNKAKYL 264
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRI 167
+ ILI+++D+ IP + L LPG+G K A++ +++A+ IGVD H+ RISNR+
Sbjct: 265 KQTTQILIDKYDSDIPNNAKELIALPGVGPKMAHICMAVAWDKLTGIGVDVHVHRISNRL 324
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P K P + +L +P ++ V G+ VC KP C C+ ++C
Sbjct: 325 GWLPRPTKEPEQTRVALESWLPSTLWAEVNHLFVGFGQTVCTPLKPNCGQCLNKDICPSA 384
Query: 226 K 226
K
Sbjct: 385 K 385
>gi|159898923|ref|YP_001545170.1| DNA-(apurinic or apyrimidinic site) lyase [Herpetosiphon
aurantiacus ATCC 23779]
gi|159891962|gb|ABX05042.1| DNA-(apurinic or apyrimidinic site) lyase [Herpetosiphon
aurantiacus ATCC 23779]
Length = 222
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ P+++ E ++ ++ P+ + +V +LS ++D N +A + L
Sbjct: 1 MLNPEKVLETLHILRERFG-PRVLHTQRDPLDELVLTILSQNTSDRNSGRAFRELKGRYP 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI---------PQTLEG 129
T +L +L+ IR G+ + K+ I + +++ + +
Sbjct: 60 TWAAVLNAESSELEETIRVGGLAKIKAARIQNTLAVILEQRGEFSLDFLRELGLHEARAW 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLRIIPP 188
LT LPGIG K A +L A P + VDTHI R++ R+ + P + + L +P
Sbjct: 120 LTALPGIGPKTAGCVLCFACNQPAMIVDTHIHRVAKRVGMIGPKVSADAAHDLLESAVPV 179
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
Y H ++LHGR +C A++P C+ C ++ +C +
Sbjct: 180 DQMYQFHVSVLLHGRQICHAQRPACERCPLTEICDFYQ 217
>gi|190573786|ref|YP_001971631.1| putative A/G-specific adenine glycosylase [Stenotrophomonas
maltophilia K279a]
gi|190011708|emb|CAQ45327.1| putative A/G-specific adenine glycosylase [Stenotrophomonas
maltophilia K279a]
Length = 374
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 83/216 (38%), Gaps = 13/216 (6%)
Query: 24 ELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ ++ + + +L + + + + ++ ++ Q+ V + + T
Sbjct: 13 QTDDFVAHLLHWFDDHGRHDLPWQHPRSPYRVWLSEIMLQQTQVSTVIPYFQRFLQHFPT 72
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A G + +G Y ++ N+ + + + D +P+ + L LPGIGR
Sbjct: 73 LPDLAAAGNDAVMAQWAGLGYYA-RARNLHAAAKRCVELHDGDLPRDFDALHALPGIGRS 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--------PNKVEQSLLRIIPPKHQ 191
A ILS A+ P +D ++ R+ +R G + ++ + +P
Sbjct: 132 TAGAILSQAWNDPFAILDGNVKRVLSRYHGIDGFPGLPAIEKLLWAIAEAHVAQVPTGRM 191
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + G VC +P C C + + C ++
Sbjct: 192 ADYTQAQMDLGATVCSRARPACVICPLQDACVARRE 227
>gi|239622391|ref|ZP_04665422.1| HhH-GPD:Iron-sulfur cluster loop-containing protein
[Bifidobacterium longum subsp. infantis CCUG 52486]
gi|239514388|gb|EEQ54255.1| HhH-GPD:Iron-sulfur cluster loop-containing protein
[Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 328
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 89/244 (36%), Gaps = 46/244 (18%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V E + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMERWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ +G R+ + + ++ ++ +K+P+T + LT LPG+G A+
Sbjct: 66 AEAPKAEVITAWGRLGYPRRALR-LQECACVVAEQYADKLPRTYDELTALPGVGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPP----------- 188
++S AFG +DT+I R+ +R+ L R++P
Sbjct: 125 VMSFAFGERIAVIDTNIRRVLSRVFLGVESRGGAASPAERALANRMLPKDEIFGCDADVA 184
Query: 189 -------------------------KHQY-NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++ G +C A+ P C +C I++ C
Sbjct: 185 DNAGSAEHAANSTIRGDKRSRLHRGERPSVTWNQSVMELGAVICTAKSPLCDTCPIADDC 244
Query: 223 KRIK 226
+K
Sbjct: 245 AFLK 248
>gi|302039433|ref|YP_003799755.1| endonuclease III [Candidatus Nitrospira defluvii]
gi|300607497|emb|CBK43830.1| Endonuclease III [Candidatus Nitrospira defluvii]
Length = 219
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 24 ELEEIFYLFS------LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHL 73
+ +EI +WP P + + F ++++ LLS ++ D +A++ L
Sbjct: 2 QAQEIHAAIRTVKREIARWPDPVVGVVARQSGRDPFLVLISCLLSLRTKDKTTAEASERL 61
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
F +A TP M + ++ I +G YR K++ I + L+ + ++P ++ L L
Sbjct: 62 FALAVTPATMQTLTIPIIERAIYPVGFYRTKAKQIQQICAQLLERYQGRVPDKIDELLTL 121
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
PG+GRK AN+++++ + P I VD H+ RISNR G K+P++ E +L +P K+
Sbjct: 122 PGVGRKTANLVVTVGYEKPGICVDIHVHRISNRWGYVKTKSPDETETALRAKLPRKYWIT 181
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ LV +G+++C+ P C C I+ C R+
Sbjct: 182 FNDLLVPYGQHLCQPVSPLCSQCKIAAYCDRV 213
>gi|158321313|ref|YP_001513820.1| A/G-specific adenine glycosylase [Alkaliphilus oremlandii OhILAs]
gi|158141512|gb|ABW19824.1| A/G-specific adenine glycosylase [Alkaliphilus oremlandii OhILAs]
Length = 544
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 85/215 (39%), Gaps = 10/215 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
K + + + +L + + + + ++ ++ Q+ V +
Sbjct: 190 KKKNYKRLPEKLLNWYQKNARDLPWRKNQDPYRVWLSEIMLQQTRVDTVIDYYNRFLQAF 249
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + E+++ +G Y ++ N+ + I++ +++ P+T E L +LPGIG
Sbjct: 250 PTIDALALADEERVLKLWEGLGYYS-RARNLHKTAKIIVAQYEGNFPETHEELLKLPGIG 308
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSL----LRIIPPKHQY 192
A I S++F +P VD ++ R+ +RI KV++ + + P
Sbjct: 309 SYTAGAIASISFNLPVAAVDGNVLRVVSRITEDYRCIDEEKVKKEMGNQLAEVYPENQCG 368
Query: 193 NAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
+ L+ G +C P C C +C K
Sbjct: 369 DFTQSLMELGATICLPNGAPLCNECPAIEICMANK 403
>gi|325912181|ref|ZP_08174579.1| putative endonuclease III [Lactobacillus iners UPII 143-D]
gi|325476131|gb|EGC79299.1| putative endonuclease III [Lactobacillus iners UPII 143-D]
Length = 208
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDIEACIKNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPNNADPSQIETILENIMPEKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|262164096|ref|ZP_06031835.1| A/G-specific adenine glycosylase [Vibrio mimicus VM223]
gi|262027624|gb|EEY46290.1| A/G-specific adenine glycosylase [Vibrio mimicus VM223]
Length = 353
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T Q + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVLPYFERFLERFPTVQALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQTVVSEYGGEFPTDLELMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICTRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|134097045|ref|YP_001102706.1| A/G-specific adenine glycosylase [Saccharopolyspora erythraea NRRL
2338]
gi|291007014|ref|ZP_06564987.1| A/G-specific adenine glycosylase [Saccharopolyspora erythraea NRRL
2338]
gi|133909668|emb|CAL99780.1| A/G-specific adenine glycosylase [Saccharopolyspora erythraea NRRL
2338]
Length = 302
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 76/201 (37%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + L + + ++V+ + Q+ V + P + A G
Sbjct: 19 LIDWFAATARPLPWRAPGTTGWGVLVSETMLQQTPVARVQPIWEEWMARWPRPSDLAAAG 78
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G R+ + I E + +P ++ L LPGIG A + +
Sbjct: 79 QAEVLRAWGKLGYPRRALRLHEAAGTIA-AEHGDVVPSDVDTLLALPGIGAYTARAVAAF 137
Query: 148 AFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQS---LLRIIPP--KHQYNAHYWLVLH 201
A+G VDT++ R+ R A P + + ++P L+
Sbjct: 138 AYGRRAPVVDTNVRRVVARAVHGAGDAGPPSTRRDLADVEALLPDTDAEAARLSAALMEL 197
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G+ VC R P C++C I++ C
Sbjct: 198 GQVVCTVRSPACETCPIAHDC 218
>gi|330470476|ref|YP_004408219.1| hhh-gpd family protein [Verrucosispora maris AB-18-032]
gi|328813447|gb|AEB47619.1| hhh-gpd family protein [Verrucosispora maris AB-18-032]
Length = 312
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + + ++V+ ++ Q+ V V A + TP +
Sbjct: 23 SRWYEHNARDLPWRKPDVSPWAILVSEVMLQQTPVVRVLPAWHAWLDRWPTPAALAQDSP 82
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ +P L+ L LPG+G A + + A
Sbjct: 83 AEAIRMWGRLGYPRRAVR-LRDCAVAIVERHGGAVPDRLDQLLALPGVGTYTARAVAAFA 141
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIP--PKHQYNAHYWLVLHG 202
+G VDT++ R+ R + ++P P A ++ G
Sbjct: 142 YGQRHPVVDTNVRRVVCRAVAGEPDAGPATRPADLVATEELLPVEPAAAALASAAIMELG 201
Query: 203 RYVCKARKPQCQSCIISNLC 222
+C AR P+C +C + ++C
Sbjct: 202 ALICTARSPRCPACPVESIC 221
>gi|312133235|ref|YP_004000574.1| muty [Bifidobacterium longum subsp. longum BBMN68]
gi|311772438|gb|ADQ01926.1| MutY [Bifidobacterium longum subsp. longum BBMN68]
Length = 328
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 88/244 (36%), Gaps = 46/244 (18%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I W + +L + + ++V+ ++S Q+ V + +
Sbjct: 6 ISLRLGAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMARWPDARAL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ +G R+ + + ++ ++ +K+P+T + LT LPGIG A+
Sbjct: 66 AEAPKAEVITAWGRLGYPRRALR-LQECARVVAEDYADKLPRTYDELTALPGIGDYTASA 124
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPP----------- 188
++S AFG +DT+I R+ +R+ L R++P
Sbjct: 125 VMSFAFGERIAVIDTNIRRVLSRVFLGVESRGGATSPAERALANRMLPKDEILGCDADVA 184
Query: 189 -------------------------KHQY-NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++ G +C A+ P C +C I++ C
Sbjct: 185 DNAGSAEHVVNSTIRGGKRSRLHRGERPSVTWNQSVMELGAVICTAKSPLCDTCPIADDC 244
Query: 223 KRIK 226
+K
Sbjct: 245 AFLK 248
>gi|119505483|ref|ZP_01627555.1| A/G-specific adenine glycosylase MutY [marine gamma proteobacterium
HTCC2080]
gi|119458592|gb|EAW39695.1| A/G-specific adenine glycosylase MutY [marine gamma proteobacterium
HTCC2080]
Length = 349
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 31 LFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + ++ ++ Q+ V + + + A
Sbjct: 7 RLLDWFDLHGRHDLPWQKSKTAYRVWLSEIMLQQTQVQTVIPYFDRFLTRFPSVEDLAAA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + + +G Y ++ N+ + +++++F + PQ L+GL +LPG+GR A ILS
Sbjct: 67 PEDDVLHLWTGLGYYA-RARNLHRAAKLVVSDFGGQFPQDLDGLLQLPGVGRSTAGAILS 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+A GI +D ++ R+ R + G NK+ P + ++
Sbjct: 126 LAMGIRAPILDGNVKRVLARHDVVSGWPGTTTTLNKLWALAEEYTPTARVADYTQGIMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
G +C P CQ C ++N C+
Sbjct: 186 GATLCTRSAPGCQHCPLTNTCQA 208
>gi|124268419|ref|YP_001022423.1| A/G-specific DNA-adenine glycosylase [Methylibium petroleiphilum
PM1]
gi|124261194|gb|ABM96188.1| A/G-specific DNA-adenine glycosylase [Methylibium petroleiphilum
PM1]
Length = 368
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 14/240 (5%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKEL--EEIFYLFSLKWP-SPKGELYY---VNHFTLIVA 54
M ++ + G +P T + + L + + + + ++
Sbjct: 1 MSAAVSPPAPSGRTPASAPDTGATATTASLAERVVTWQRTQGRHGLPWQRERDPYRVWLS 60
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++ Q+ V E + + +G Y ++ N+ +
Sbjct: 61 EIMLQQTQVSTVLTYYVRFLERFPDVAALARAALDDVLAAWAGLGYYS-RARNLHRCAQA 119
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-----GL 169
++ E + P + E L LPGIGR A I + FG +D ++ R+ R+ L
Sbjct: 120 VMAEHGGRFPASAEQLATLPGIGRSTAAAIAAFCFGERAAILDGNVKRVLTRVLGFSADL 179
Query: 170 APGKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
A + + ++PP L+ G VC ARKP C C + C ++
Sbjct: 180 AVARHERGLWARACELLPPASADMPTYTQGLMDLGATVCLARKPNCLLCPLQGDCVARRE 239
>gi|328908093|gb|EGG27852.1| A/G-specific adenine glycosylase [Propionibacterium sp. P08]
Length = 290
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 15/220 (6%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATK 71
+ TP+ ++ + + +L + + + ++V+ ++S Q+ V
Sbjct: 1 MPAGLTPQAIKTV----CDWFDINGRDLPWRRPGTSPWGVLVSEVMSQQTPMSRVIDPWH 56
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
TP + + +G R+ + + + + E+D +P + + L
Sbjct: 57 EWMNRWPTPDDLAEEDSGEAVAAWGRLGYPRRALR-LHACAVAIATEYDGVVPSSYDELV 115
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIP 187
LPGIG A ++S AFG +DT++ R+ R P V ++ ++P
Sbjct: 116 ALPGIGDYTAAAVVSFAFGGRATVLDTNVRRLIARAESGIANCPTSVTKAERVVADALVP 175
Query: 188 PKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + G VC AR PQC C I C+ +
Sbjct: 176 EEDARAALWAVASMELGALVCTARSPQCTVCPIRERCRWV 215
>gi|152980113|ref|YP_001354812.1| A/G-specific adenine glycosylase [Janthinobacterium sp. Marseille]
gi|151280190|gb|ABR88600.1| A/G-specific adenine glycosylase [Janthinobacterium sp. Marseille]
Length = 384
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 77/194 (39%), Gaps = 9/194 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V E T + A +++ +
Sbjct: 44 RHALPWQNTRDAYRVWLSEIMLQQTQVAAVIPYYLRFLETFPTVASLAAAPSEEVMAHWS 103
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ E+ P E L +LPGIGR A I + ++G +
Sbjct: 104 GLGYYS-RARNLHKCAQTIVAEYGGVFPSDPELLEQLPGIGRSTAAAISAFSYGTRAAIL 162
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R+ K VE L ++P L+ G +C P
Sbjct: 163 DGNVKRVFARVFGVERYPGEKAVENELWLRAVALLPENGVEAYTQGLMDLGATLCTRNSP 222
Query: 212 QCQSCIISNLCKRI 225
CQ C +++ C
Sbjct: 223 SCQRCPLAHRCVAY 236
>gi|301105551|ref|XP_002901859.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
gi|262099197|gb|EEY57249.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
Length = 287
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-----TPQKMLAIGEKKLQNYIRTIGIYRK 103
F L+VA LLS+Q+ D A + L ++ + T + + ++ E+KL ++ +G Y +
Sbjct: 77 FQLLVAALLSSQTQDPITYAAMQRLHQLGESEEGLTIEVVQSVSEEKLSEALKPVGFYHR 136
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFR 162
K+ + ++ IL F IP++L+ L +LPGIG K VI +A+G I VDTH+ R
Sbjct: 137 KAHQLKRVAAILRTRFHGDIPRSLDELLQLPGIGPKIGRVITLLAWGQVDGIVVDTHVHR 196
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ R+G + TP + L IP +H +V G+ VC A+ P C C ++ C
Sbjct: 197 LAQRLGWSSTTTPEDTRKELEDWIPKEHWGKLSLVVVGFGQTVCTAKHPSCSKCPLATKC 256
Query: 223 KR 224
Sbjct: 257 PS 258
>gi|229519838|ref|ZP_04409272.1| A/G-specific adenine glycosylase [Vibrio cholerae TM 11079-80]
gi|229343126|gb|EEO08110.1| A/G-specific adenine glycosylase [Vibrio cholerae TM 11079-80]
Length = 378
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 51 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 110 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 169
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 170 RCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICIRSKPKCSLCPVES 229
Query: 221 LCKRIKQ 227
LC +Q
Sbjct: 230 LCLAKQQ 236
>gi|307825390|ref|ZP_07655609.1| A/G-specific adenine glycosylase [Methylobacter tundripaludum SV96]
gi|307733565|gb|EFO04423.1| A/G-specific adenine glycosylase [Methylobacter tundripaludum SV96]
Length = 349
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 10/203 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ I F + + + ++ + Q+ V E +
Sbjct: 8 QNILAWFDQ-YGRKDLPWQKDLTPYRVWLSETMLQQTQVATVIPYFNTFIEKFPDIASLA 66
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ + +G Y + + I P T + L LPGIG A I
Sbjct: 67 NAPVDEVLHLWSGLGYYARARNLHKTAQLITERGRF---PDTPDELIALPGIGLSTAGAI 123
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLV 199
LS+AF +D ++ R+ R G ++ R+ P + ++
Sbjct: 124 LSIAFNKRHPILDGNVKRVLTRFRAVSGWPGNSAVNKELWAISARLTPIDRVADYTQAMM 183
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G +C KP C +C ++ C
Sbjct: 184 DLGATLCTRSKPACAACPLNADC 206
>gi|255038181|ref|YP_003088802.1| HhH-GPD family protein [Dyadobacter fermentans DSM 18053]
gi|254950937|gb|ACT95637.1| HhH-GPD family protein [Dyadobacter fermentans DSM 18053]
Length = 335
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 76/186 (40%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ + E T + A E+ + + +G Y ++
Sbjct: 7 KDPYKIWLSEVILQQTRVAQGLPYYERFTEQYPTVFDLAAADERDVLRLWQGLGYYS-RA 65
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ +++ + P++ E L +L G+G+ A I S AF +D +++R+
Sbjct: 66 RNMHFTARQVVEDYNGRFPESAEKLLKLKGLGQYTAAAIASFAFNEAVPAIDGNVYRVMA 125
Query: 166 RIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
RI + +++P + ++ G C P C +CI ++
Sbjct: 126 RIFGIQADMLSNEGKKEFAALARQLVPKDDPATYNQAMIEFGALQCVPASPNCAACIFND 185
Query: 221 LCKRIK 226
C +
Sbjct: 186 RCFAYE 191
>gi|147675529|ref|YP_001215977.1| A/G-specific adenine glycosylase [Vibrio cholerae O395]
gi|262167154|ref|ZP_06034868.1| A/G-specific adenine glycosylase [Vibrio cholerae RC27]
gi|146317412|gb|ABQ21951.1| A/G-specific adenine glycosylase [Vibrio cholerae O395]
gi|227012305|gb|ACP08515.1| A/G-specific adenine glycosylase [Vibrio cholerae O395]
gi|262024454|gb|EEY43141.1| A/G-specific adenine glycosylase [Vibrio cholerae RC27]
Length = 353
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAKMVVSEYSGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L P + ++ G +C KP+C C + +
Sbjct: 145 RCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICIRSKPKCSLCPVES 204
Query: 221 LCKRIKQ 227
C +Q
Sbjct: 205 FCLAKQQ 211
>gi|71275806|ref|ZP_00652090.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Dixon]
gi|71900405|ref|ZP_00682538.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Ann-1]
gi|170730212|ref|YP_001775645.1| A/G-specific adenine glycosylase [Xylella fastidiosa M12]
gi|71163384|gb|EAO13102.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Dixon]
gi|71729837|gb|EAO31935.1| A/G-specific adenine glycosylase MutY [Xylella fastidiosa Ann-1]
gi|167965005|gb|ACA12015.1| A/G-specific adenine glycosylase [Xylella fastidiosa M12]
Length = 349
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 10/203 (4%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + + ++ ++ Q+ V E T ++ A +
Sbjct: 14 DQYGRHHLPWQHPRTPYRVWISEIMLQQTQVAVVIPYFLRFLERFPTLPELAAADTDAVM 73
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y + + + + +P L LPGIGR A ILS A+
Sbjct: 74 AHWAGLGYYARARHLHAAAKRCVELHGGD-LPHDQNALQALPGIGRSTAAAILSQAWNDR 132
Query: 153 TIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRII-------PPKHQYNAHYWLVLHGRY 204
+D +I R+ +R+ + + +E+ L + P + + G
Sbjct: 133 APILDGNIKRVLSRLHGIVGWSGQSMIEKELWELAEAYVLQPPTGRLADYTQAQMDFGAT 192
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC +P C C + + C ++
Sbjct: 193 VCTRLRPACLICPLQDGCVAWRE 215
>gi|260773610|ref|ZP_05882526.1| A/G-specific adenine glycosylase [Vibrio metschnikovii CIP 69.14]
gi|260612749|gb|EEX37952.1| A/G-specific adenine glycosylase [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ +T+ ++ ++ Q+ V + E + + A + ++
Sbjct: 13 DAYGRKHLPWQQNKTAYTVWLSEIMLQQTQVTTVIPYYQRFVERFPSVADLAAAQQDEVL 72
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
++ +G Y ++ N+ + I+++++ + P LE + LPG+GR A +LS F P
Sbjct: 73 HHWTGLGYYA-RARNLHKTAKIIVDQYQGQFPTELEAMNALPGVGRSTAAAVLSSVFKKP 131
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
+D ++ R R G K+ + P + ++ G +C
Sbjct: 132 HAILDGNVKRTLARCFAVEGWPGKKIVENQLWLHAEQQTPSVDVDKYNQAMMDMGAMICT 191
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
KP+C C + +LC +Q
Sbjct: 192 RSKPKCTLCPVESLCIAKQQ 211
>gi|78211651|ref|YP_380430.1| A/G-specific DNA-adenine glycosylase [Synechococcus sp. CC9605]
gi|78196110|gb|ABB33875.1| mutator mutT protein [Synechococcus sp. CC9605]
Length = 396
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 10/194 (5%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
WP +L + + + +A ++ Q+ E T + + A +++
Sbjct: 58 TWPEAVHQL---DPYGIWIAEVMLQQTQLAVALPYWMRWMEAFPTVETLAAASLDEVRLQ 114
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ +G Y + + P++LE LPGIGR A ILS AF +
Sbjct: 115 WQGLGYYSRVRRLHEA----AQRLVGRPWPRSLEEWMALPGIGRTTAGSILSSAFNLRLP 170
Query: 155 GVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
+D ++ R+ R+ ++ P + + L+ G +C R+P
Sbjct: 171 ILDGNVKRVLARLTAHARPPARDDALFWCWSEALLDPVRARDTNQALMDLGATLCTPRQP 230
Query: 212 QCQSCIISNLCKRI 225
C C + C
Sbjct: 231 ACHRCPWHSQCAAY 244
>gi|76802745|ref|YP_330840.1| A/G-specific adenine glycosylase [Natronomonas pharaonis DSM 2160]
gi|76558610|emb|CAI50202.1| A/G-specific adenine glycosylase [Natronomonas pharaonis DSM 2160]
Length = 307
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 79/211 (37%), Gaps = 8/211 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P +++ + + + + + + ++V+ ++S Q+ V +A +
Sbjct: 9 PADVDAVRAALIEWYETDHRSYPWRETEDPYEILVSEVMSQQTQLDRVVEAWHAFLDEWP 68
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + + + + Y +++ + + + +E D + P+T +GL L G+G
Sbjct: 69 TAEALAEADRAAVVGFWTDHSLGYNNRAKYLHEAARQVRDEHDGEFPRTPDGLQELMGVG 128
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN + S AF VDT++ R+ K + ++P +
Sbjct: 129 PYTANAVASFAFNNGDAVVDTNVKRVLYRAFSELHDKEEPPYQHIADELLPKGRSRVWNN 188
Query: 197 WLVLHGRYVCKARKPQCQS--CIISNLCKRI 225
++ G C + P+C C C
Sbjct: 189 AIMELGAVAC-GKTPRCDEAGCPWREWCDAY 218
>gi|71019741|ref|XP_760101.1| hypothetical protein UM03954.1 [Ustilago maydis 521]
gi|46099866|gb|EAK85099.1| hypothetical protein UM03954.1 [Ustilago maydis 521]
Length = 539
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 68/203 (33%), Gaps = 16/203 (7%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
E + + ++ ++ Q+ V + T + + A + + R +G
Sbjct: 123 REARKKRAYQVWISEIMLQQTRVETVKTYWLNWMNKWPTIEALAAADPEAVLAAWRGLGY 182
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLT--RLPGIGRKGANVILSMAFGIPTIGVDT 158
Y + + + ++ + + +PG+G A I S+ FG +D
Sbjct: 183 YSRATRIHTAAKRVVADPHMMGLLPETPQELEKNVPGVGPYTAGAISSIVFGQAVPIIDG 242
Query: 159 HIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH---------QYNAHYWLVLHGRY 204
++ R+ +R K + + +++ + L+ G
Sbjct: 243 NVVRVLSRQLALYANPKTKLTSHLMWATATKLVHKASALRGGKATVPGQWNQALMELGST 302
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC KP+C C I C ++
Sbjct: 303 VCTPTKPRCDECPIQATCSAHQE 325
>gi|198284703|ref|YP_002221024.1| A/G-specific adenine glycosylase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665261|ref|YP_002427383.1| A/G-specific adenine glycosylase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249224|gb|ACH84817.1| A/G-specific adenine glycosylase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517474|gb|ACK78060.1| A/G-specific adenine glycosylase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 369
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 11/209 (5%)
Query: 28 IFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
I + + +L + + + L +A ++ Q+ + + Q +
Sbjct: 4 IAEPLLAWYTRHGRHDLPWRQTRDPYRLWLAEIMLQQTQVESAKPYYVRFLQALPNWQAL 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + ++ +G Y + + ++ F P TLE LPG+GR A
Sbjct: 64 AAAPQDRVLALWSGLGYYARARNA-QRAAQTVMTGFAGHFPDTLEKAITLPGVGRSTAAA 122
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQYNAHYWL 198
+L+ AFG +D + R+ R Q L + P + +
Sbjct: 123 VLASAFGHRQAILDANARRVLIRSHAIDADPKAAATQQWLWTLASALTPEDAHG-YNQAI 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C R+P+C C +++ CK Q
Sbjct: 182 QDLGAMICTPRQPRCPDCPLASRCKAHAQ 210
>gi|319945399|ref|ZP_08019659.1| A/G-specific adenine glycosylase [Lautropia mirabilis ATCC 51599]
gi|319741185|gb|EFV93612.1| A/G-specific adenine glycosylase [Lautropia mirabilis ATCC 51599]
Length = 397
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 12/192 (6%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + T + A +++ +G Y +
Sbjct: 52 RDPYRVWLSEVMLQQTQVATVIPYFEAFLRAFPTVNDLAAADAEQVMGLWAGLGYYSRAR 111
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + PQT +GL LPG+GR A I AFG +D ++ R+ +
Sbjct: 112 NLHAAARQVAEAGGAF--PQTAQGLEALPGVGRSTAAAIAVFAFGERAAILDGNVKRVLS 169
Query: 166 RIGLAPGKTP-----NKVEQSLLRIIPPK-----HQYNAHYWLVLHGRYVCKARKPQCQS 215
R+ G ++ +PP+ + L+ G VC +P C
Sbjct: 170 RVFAVEGDPAGSATLARLWAHAEAELPPEGAPAADLIDYTQGLMDLGAMVCTRSRPDCGQ 229
Query: 216 CIISNLCKRIKQ 227
C ++ LC+ +Q
Sbjct: 230 CPLAALCQARQQ 241
>gi|150403470|ref|YP_001330764.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
gi|150034500|gb|ABR66613.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
Length = 356
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+ ++SA++ D K +K LF+ +P+ + I ++L+ + G Y+ K++N
Sbjct: 38 AFKILVSTVISARTKDETTAKVSKALFKKVKSPKDLSDISLEELEKLVHPAGFYKTKAKN 97
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L IL+ E+D+KIP ++E L LPG+GRK AN+++++AF I VDTH+ RI+NR
Sbjct: 98 LKKLGKILLEEYDSKIPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRW 157
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
+ P E L + +P + + LV+ G+ +C P+C C I +C
Sbjct: 158 NYVNTEFPEDTEMELRKKLPKNYWKRINNLLVVFGQEICSPI-PKCDKCFSEIREICPHY 216
>gi|32266741|ref|NP_860773.1| A/G-specific adenine glycosylase [Helicobacter hepaticus ATCC
51449]
gi|32262792|gb|AAP77839.1| A/G-specific adenine glycosylase [Helicobacter hepaticus ATCC
51449]
Length = 350
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 6/200 (3%)
Query: 30 YLFSLKWPSPKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + L + N + + V+ ++ Q+ V + F A
Sbjct: 20 NILNWYKKHGRVYLPWRNLSEKNAPYGVYVSEIMLQQTQVKRVLEHYYMPFMTAFPTLTS 79
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
LA +++ + Y + N+ + I F+N +P T L LPGIG A
Sbjct: 80 LANAQEESLLKLWEGLGYYTRVRNMQKSARICCQRFNNTLPHTYAELISLPGIGAYSAGA 139
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
IL VD +I R+ RI T +E+ ++ PK+ ++ + L+ G
Sbjct: 140 ILCFGLRQNVAFVDGNIRRVFCRIFALSSPTQKSLEELAWILLEPKYSFDYNQALLDIGA 199
Query: 204 YVCKARKPQCQSCIISNLCK 223
+C + P C C + LC+
Sbjct: 200 MICTPKSPSCLICPLQQLCE 219
>gi|325119699|emb|CBZ55252.1| putative helix-hairpin-helix motif-containing protein [Neospora
caninum Liverpool]
Length = 763
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + V+ ++ Q+ V + T ++ E ++ +G YR ++
Sbjct: 187 SPYGIWVSEVMLQQTQVCTVIDYWQRWMSRWPTVTELAKAEEGEVSQMWSGLGYYR-RAR 245
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
++ + ++ +F ++P ++ L +PGIG I ++AFG VD ++ R+ +R
Sbjct: 246 QLLKGAQTVVQDFAGELPGQVDKLLTIPGIGPYTGGAISAIAFGNRAAAVDGNVLRVLSR 305
Query: 167 I-GLAPGKTPNKVEQSLLRIIPP----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ GLA + R++PP + + L+ G +C R P C SC + +
Sbjct: 306 LLGLAVPADSRALAALCSRLMPPLLDPRRAGASTEALIELGATICTPRAPSCLSCPVRHF 365
Query: 222 C 222
C
Sbjct: 366 C 366
>gi|325915145|ref|ZP_08177471.1| A/G-specific DNA-adenine glycosylase [Xanthomonas vesicatoria ATCC
35937]
gi|325538667|gb|EGD10337.1| A/G-specific DNA-adenine glycosylase [Xanthomonas vesicatoria ATCC
35937]
Length = 341
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 12/199 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + ++ ++ Q+ V + + A + +
Sbjct: 10 RHDLPWQHPRAPYRVWLSEIMLQQTQVAVVVPYFQKFVARFPALADLAAADNDTVMAHWA 69
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + + ++P+ + L LPGIGR A ILS A+ +
Sbjct: 70 GLGYYA-RARNLHAAAKQCVALHAGELPRDFDALLALPGIGRSTAGAILSQAWNDRFPIM 128
Query: 157 DTHIFRIS-NRIGLAPGKTPNKVEQSLLRI-------IPPKHQYNAHYWLVLHGRYVCKA 208
D ++ R+ G+A VE+ L ++ +P + + G +C
Sbjct: 129 DGNVKRVMTRFHGIAGYPGLPVVEKQLWQLATTHVADVPDGRLADYTQAQMDFGATLCTR 188
Query: 209 RKPQCQSCIISNLCKRIKQ 227
KP C C + + C ++
Sbjct: 189 AKPACVLCPLQDACVARRE 207
>gi|166154328|ref|YP_001654446.1| putative DNA glycosylase [Chlamydia trachomatis 434/Bu]
gi|166155203|ref|YP_001653458.1| putative DNA glycosylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335579|ref|ZP_07223823.1| A/G-specific adenine glycosylase [Chlamydia trachomatis L2tet1]
gi|165930316|emb|CAP03802.1| putative DNA glycosylase [Chlamydia trachomatis 434/Bu]
gi|165931191|emb|CAP06756.1| putative DNA glycosylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 368
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|332289348|ref|YP_004420200.1| adenine DNA glycosylase [Gallibacterium anatis UMN179]
gi|330432244|gb|AEC17303.1| adenine DNA glycosylase [Gallibacterium anatis UMN179]
Length = 376
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + T ++ ++ + +G Y ++
Sbjct: 34 KSLYGVWLSEIMLQQTQVTTVIPYFQQFIQRFPTITELANAPIDEVLHLWTGLGYYA-RA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + ++ + P E + LPG+G A ILS P +D ++ R+ +
Sbjct: 93 RNLHKAAQQIRDQHQGEFPTQFEQVLALPGVGLSTAGAILSSCLDAPFPILDGNVKRVLS 152
Query: 166 RIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G K VE L ++ P + ++ G VC KP+C C +
Sbjct: 153 RCFAIDGWPGEKSVETKLWQLSAEVTPKTQVTEFNQAMMDIGAMVCTRSKPKCSLCPLQQ 212
Query: 221 LCKRIK 226
C K
Sbjct: 213 QCTAGK 218
>gi|242309549|ref|ZP_04808704.1| A/G-specific adenine glycosylase [Helicobacter pullorum MIT
98-5489]
gi|239524120|gb|EEQ63986.1| A/G-specific adenine glycosylase [Helicobacter pullorum MIT
98-5489]
Length = 331
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 8/201 (3%)
Query: 30 YLFSLKWPSPKGELYYVN------HFTLIVAVLLSAQSTDVNV-NKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+ V E T +
Sbjct: 13 EILLWYSKEGRKSLPWRDKSQKNRAYRVWISEIMLQQTQVKTVLENYYFPFLEKFPTLES 72
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E+++ R +G Y ++ N++ + I F+ ++P+ L+ L +LPGIGR A
Sbjct: 73 LANAKEEEVLLQWRGLGYYT-RARNLLKTAKICKESFNGELPKNLDLLQKLPGIGRYTAG 131
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
I F VD++I RI R T N +E I+ +N + L+ G
Sbjct: 132 AIACFGFDCAVSFVDSNIKRILTRFFALQNPTQNLLESKAKEILNCYDPFNHNQALLDIG 191
Query: 203 RYVCKARKPQCQSCIISNLCK 223
+C + P C C + N C+
Sbjct: 192 ATICTPKNPLCPKCPLQNFCQ 212
>gi|196232749|ref|ZP_03131600.1| HhH-GPD family protein [Chthoniobacter flavus Ellin428]
gi|196223209|gb|EDY17728.1| HhH-GPD family protein [Chthoniobacter flavus Ellin428]
Length = 341
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 9/202 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + ++V+ + Q+ V V E + A
Sbjct: 22 QKLARWFRQHGRDLPWRRTHDPYAIMVSEFMLQQTQVVTVRDYYARWLERFPDFNALAAA 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + + + +G Y ++ N+ + + + ++P L ++ LPG+GR A + +
Sbjct: 82 SEADVLHVWQGLGYYA-RARNLHRAAKQVADLHSGQLPNDLVAISALPGVGRYTAGAVAT 140
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLH 201
AF T +D +I R+ R+ K + + ++P K + L+
Sbjct: 141 FAFDQATPIIDANIARVIARLLDLQEPIDTKRGSEILWLTAEELLPAKSGRVHNSALMEL 200
Query: 202 GRYVCKARKPQCQSCIISNLCK 223
G +C R PQC C I C+
Sbjct: 201 GALLCTPRAPQCPICPIREHCR 222
>gi|40287958|gb|AAR84084.1| MutY [Pseudomonas fluorescens]
Length = 358
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 83/214 (38%), Gaps = 10/214 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + +L + + + + V+ ++ Q+ V
Sbjct: 1 MRAEQFSTFSTAVLDWFDRHGRHDLPWQQAISPYRVWVSEIMLQQTQVSTVLNYFDRFMA 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + A E ++ + +G Y ++ N+ + I++ ++ + P+ +E LT LPG
Sbjct: 61 SLPTVQALAAAPEDEVLHLWTGLGYYT-RARNLQKTAKIVVEQYGGEFPRDVEKLTELPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKH 190
IG A I S++ G+ +D ++ R+ R + G ++ + R P
Sbjct: 120 IGLSTAGAIASISMGLRAPILDGNVKRVLARFTVQEGYPGEPKVAKQLWATAERFTPQDR 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G +C KP C C + C+
Sbjct: 180 VNAYTQAMMDLGATLCTRSKPSCLLCPLKQGCEA 213
>gi|254823229|ref|ZP_05228230.1| MutY [Mycobacterium intracellulare ATCC 13950]
Length = 282
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 75/194 (38%), Gaps = 10/194 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + +L + + ++V+ + Q+ V TP A
Sbjct: 2 AWYETSRRDLPWREPGVSAWQILVSEFMLQQTPVARVLPIWSDWVRRWPTPSATAAASAA 61
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G ++++ + + ++ + D+ +P ++ L LPG+G A + A+
Sbjct: 62 DVLRAWGKLGY-PRRAKRLHECATVIARDHDDVVPDDVDTLLTLPGVGSYTARAVACFAY 120
Query: 150 GIPTIGVDTHIFRISNR--IGLAPGKTPNKVE--QSLLRIIPPKH-QYNAHYWLVLHGRY 204
VDT++ R+ R GLA P+ + ++P L+ G
Sbjct: 121 RRRVPVVDTNVRRVVARVVHGLADAGAPSATRDHADVSALLPDDATAPQFSVALMELGAT 180
Query: 205 VCKARKPQCQSCII 218
VC AR P+C C +
Sbjct: 181 VCTARAPRCGLCPL 194
>gi|313139651|ref|ZP_07801844.1| A/G-specific DNA glycosylase [Bifidobacterium bifidum NCIMB 41171]
gi|313132161|gb|EFR49778.1| A/G-specific DNA glycosylase [Bifidobacterium bifidum NCIMB 41171]
Length = 326
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 27 EIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L S W + +L + + ++V+ ++S Q+ V +
Sbjct: 8 RVRALLSAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMRVWPDVTA 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G R+ + + ++ ++ ++PQT + LT LPGIG A+
Sbjct: 68 LAGASTAEVITAWGRLGYPRRALR-LQECARVVFEQYHGRLPQTYDELTALPGIGDYTAS 126
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLL-RIIPPKHQYN----- 193
+LS AFG+ VDT+I R+ +R+ L + G + E++L R++P + +
Sbjct: 127 AVLSFAFGVRIAVVDTNIRRVLSRVFLGVESRGGAASPAERALAGRVLPQDDETDVRDAI 186
Query: 194 -----------------------------AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC A+ P C C I C
Sbjct: 187 EAANARETVNAPESAIREVPQRSTRPSVIWNQSVMELGALVCTAKNPLCDQCPIGEHC 244
>gi|310286961|ref|YP_003938219.1| A/G-specific DNA glycosylase, HhH-GPD superfamily base excision DNA
repair domain protein [Bifidobacterium bifidum S17]
gi|309250897|gb|ADO52645.1| A/G-specific DNA glycosylase, HhH-GPD superfamily base excision DNA
repair domain protein [Bifidobacterium bifidum S17]
Length = 338
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 27 EIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L S W + +L + + ++V+ ++S Q+ V +
Sbjct: 20 RVRALLSAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMRVWPDVTA 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G R+ + + ++ ++ ++PQT + LT LPGIG A+
Sbjct: 80 LAGASTAEVITAWGRLGYPRRALR-LQECARVVFEQYHGRLPQTYDELTALPGIGDYTAS 138
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLL-RIIPPKHQYN----- 193
+LS AFG+ VDT+I R+ +R+ L + G + E++L R++P + +
Sbjct: 139 AVLSFAFGVRIAVVDTNIRRVLSRVFLGVESRGGAASPAERALAGRVLPQDDETDVRDAI 198
Query: 194 -----------------------------AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC A+ P C C I C
Sbjct: 199 EAANARETVNAPESAIREMTQRSTRPSVIWNQSVMELGALVCTAKNPLCDQCPIGEHC 256
>gi|224282499|ref|ZP_03645821.1| A/G-specific DNA glycosylase [Bifidobacterium bifidum NCIMB 41171]
Length = 338
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 27 EIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L S W + +L + + ++V+ ++S Q+ V +
Sbjct: 20 RVRALLSAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMRVWPDVTA 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G R+ + + ++ ++ ++PQT + LT LPGIG A+
Sbjct: 80 LAGASTAEVITAWGRLGYPRRALR-LQECARVVFEQYHGRLPQTYDELTALPGIGDYTAS 138
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLL-RIIPPKHQYN----- 193
+LS AFG+ VDT+I R+ +R+ L + G + E++L R++P + +
Sbjct: 139 AVLSFAFGVRIAVVDTNIRRVLSRVFLGVESRGGAASPAERALAGRVLPQDDETDVRDAI 198
Query: 194 -----------------------------AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC A+ P C C I C
Sbjct: 199 EAANARETVNAPESAIREVPQRSTRPSVIWNQSVMELGALVCTAKNPLCDQCPIGEHC 256
>gi|309805620|ref|ZP_07699662.1| putative endonuclease III [Lactobacillus iners LactinV 09V1-c]
gi|308165058|gb|EFO67299.1| putative endonuclease III [Lactobacillus iners LactinV 09V1-c]
Length = 208
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDVEACIKNIGLYRTKAKHLKTTATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPNNADPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|191638478|ref|YP_001987644.1| Endonuclease III [Lactobacillus casei BL23]
gi|239631433|ref|ZP_04674464.1| endonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|190712780|emb|CAQ66786.1| Endonuclease III [Lactobacillus casei BL23]
gi|239525898|gb|EEQ64899.1| endonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 215
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E +++F +P P+ L+ + F ++VAV+LSAQ+TDV VN T LF T
Sbjct: 1 MTDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVAVNAVTPKLFAAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A + + I +G+YR K+ ++ +LS IL+ E+ K+P L RLPG+G+K
Sbjct: 61 PADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWL 198
A V+LS AF IP + VDTH+ RI +GL P TP +++ L ++PP H L
Sbjct: 121 TATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQIQARLEALMPPSEWIKLHRSL 180
Query: 199 VLHGRYVCKARKPQ 212
+ GR +AR PQ
Sbjct: 181 IRFGREYLRARDPQ 194
>gi|261335240|emb|CBH18234.1| endonuclease III, putative [Trypanosoma brucei gambiense DAL972]
Length = 259
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++A++LSAQ+ D A L + TP+ + + E KL +I +G + K+ NI
Sbjct: 49 YHILLALMLSAQTKDHVTAAAMHSLIDHGCTPETIYKMPESKLNEFISKVGFHNTKARNI 108
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ + ++ +P++ EGL LPG+G K A++ L A + VDTH+ RI+ R
Sbjct: 109 KAATESILQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQEADSVVIGIGVDTHVHRIAQRF 168
Query: 168 GLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR- 224
P P ++L +P K+ + LV G+ +C R P+C C S LC
Sbjct: 169 HWVPSTVKSPEDTRKALEAWLPAKYWGEINGMLVGLGQTICTPRIPRCSECPASGLCPSA 228
Query: 225 IKQ 227
++
Sbjct: 229 FRE 231
>gi|255348467|ref|ZP_05380474.1| putative DNA glycosylase [Chlamydia trachomatis 70]
gi|255503009|ref|ZP_05381399.1| putative DNA glycosylase [Chlamydia trachomatis 70s]
gi|289525150|emb|CBJ14623.1| putative DNA glycosylase [Chlamydia trachomatis Sweden2]
gi|296434694|gb|ADH16872.1| putative DNA glycosylase [Chlamydia trachomatis E/150]
Length = 368
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|116494967|ref|YP_806701.1| EndoIII-related endonuclease [Lactobacillus casei ATCC 334]
gi|116105117|gb|ABJ70259.1| Predicted EndoIII-related endonuclease [Lactobacillus casei ATCC
334]
Length = 215
Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E +++F +P P+ L+ + F ++VAV+LSAQ+TDV VN T LF T
Sbjct: 1 MTDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVAVNAVTPKLFAAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A + + I +G+YR K+ ++ +LS IL+ E+ K+P L RLPG+G+K
Sbjct: 61 PADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWL 198
A V+LS AF IP + VDTH+ RI +GL P TP +V+ L ++PP H L
Sbjct: 121 TATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQVQARLEALMPPSEWIKLHRSL 180
Query: 199 VLHGRYVCKARKPQ 212
+ GR +AR PQ
Sbjct: 181 IRFGREYLRARDPQ 194
>gi|289193061|ref|YP_003459002.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
gi|288939511|gb|ADC70266.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
Length = 344
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++V+ ++SA++ D + +K LF+ +L I E+KL N I G Y+ K+
Sbjct: 24 RDPFKVLVSTIISARTKDEVTEEVSKRLFKEIKDVDDLLNIDEEKLSNLIYPAGFYKNKA 83
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+ L+ IL ++ ++P +LE L +LPG+GRK AN+++++AF I VDTH+ RI N
Sbjct: 84 KNLKKLAKILKENYNGRVPDSLEELLKLPGVGRKTANLVITLAFNKDGICVDTHVHRICN 143
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCK 223
R + +TP + E L + +P K+ + LV+ GR +C KP+C C I C
Sbjct: 144 RWEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFGREICSP-KPKCDKCFEEIREKCP 202
Query: 224 RIKQ 227
++
Sbjct: 203 YYEK 206
>gi|212550687|ref|YP_002309004.1| A/G-specific adenine glycosylase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548925|dbj|BAG83593.1| A/G-specific adenine glycosylase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 363
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 84/211 (39%), Gaps = 9/211 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K+ + S K L + + + + ++ ++ Q+ K +
Sbjct: 2 KDFNFFSKKLITWYSSHKRNLPWRGIYDPYKIWISEVILQQTRVTQGLKYYNRFIKRFPD 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ + + E+++ Y + +G Y ++ N+ + ++++++ P+ + +L GIG
Sbjct: 62 IESLAGVEEQEVLKYWQGLGYYS-RARNLHRTAKTIMDKYNGVFPKDYYTILKLKGIGEY 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
A+ I S A+ +P VD ++FR +R+ N + ++++
Sbjct: 121 TASSITSFAWNMPHPTVDGNVFRFLSRLFAIDCPIDTIKGKNHFTELAIQLMDKSKARIF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ ++ G C P C C ++C
Sbjct: 181 NHAIMEFGALQCIPSSPDCTVCSFKSVCLAY 211
>gi|296435623|gb|ADH17797.1| putative DNA glycosylase [Chlamydia trachomatis G/9768]
gi|296437483|gb|ADH19644.1| putative DNA glycosylase [Chlamydia trachomatis G/11074]
gi|297139982|gb|ADH96740.1| A/G-specific adenine glycosylase [Chlamydia trachomatis G/9301]
Length = 368
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|15604826|ref|NP_219610.1| A/G-specific adenine glycosylase [Chlamydia trachomatis D/UW-3/CX]
gi|255506681|ref|ZP_05382320.1| A/G-specific adenine glycosylase [Chlamydia trachomatis D(s)2923]
gi|3328504|gb|AAC67698.1| A/G-specific Adenine Glycosylase [Chlamydia trachomatis D/UW-3/CX]
gi|296438412|gb|ADH20565.1| A/G-specific adenine glycosylase [Chlamydia trachomatis E/11023]
Length = 369
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 15 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 74
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 75 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 133
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 134 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 193
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 194 LGARICK-KQPLCEQCPLRSFCTAYRQ 219
>gi|118764360|gb|AAI28729.1| Mutyh protein [Rattus norvegicus]
Length = 184
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 5/176 (2%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + T Q + + +++ +G Y + ++
Sbjct: 1 MLQQTQVATVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVE 60
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-----AP 171
+ LPG+GR A I S+AF T VD ++ R+ R+
Sbjct: 61 ELGGHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTS 120
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 121 SFVSHHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAHQR 176
>gi|21672797|ref|NP_660864.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008823|sp|Q8K926|MUTY_BUCAP RecName: Full=A/G-specific adenine glycosylase
gi|21623446|gb|AAM68075.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 347
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+T K+ Q + + +G Y+ ++
Sbjct: 28 KTLYKVWISEIMLQQTTVKTAIPYFKNFISRFPNIQSLNQSKLDDILCLWSGLGYYK-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-S 164
ENI I+ EF K P L +LPGIGR A ILS++ ++ ++ RI
Sbjct: 87 ENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRSTAGAILSLSLDYFFPILEGNVKRILM 146
Query: 165 NRIGLAPGKTPNKVEQSLLRII----PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
G+ T K+EQ L +I P + + + ++ G +C + P+C C +
Sbjct: 147 RYYGIIGYVTEKKIEQKLWYLIELITPIHNTGSFNQGIMDIGALICTPKNPKCNLCPLIQ 206
Query: 221 LCKRIKQ 227
C K+
Sbjct: 207 KCIAYKE 213
>gi|325912697|ref|ZP_08175080.1| putative endonuclease III [Lactobacillus iners UPII 60-B]
gi|325478118|gb|EGC81247.1| putative endonuclease III [Lactobacillus iners UPII 60-B]
Length = 208
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELKWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPNSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ IR IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDIEACIRNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPKSAEPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|320094864|ref|ZP_08026602.1| adenine glycosylase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978193|gb|EFW09798.1| adenine glycosylase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 309
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 8/185 (4%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ +V ++S Q+ V V + P + + T+G +
Sbjct: 36 TPWGTLVFEVMSQQTPLVRVAPVWLRWMRLWPAPADLADAPTADVLVEWSTLGYPSRALR 95
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + + +P L LPG+G A + S F +D +I R+++R
Sbjct: 96 -LQQCATRIRDAHGGAVPTDHAQLLDLPGVGGYTAAALASFQFHQRIAVLDVNIRRVASR 154
Query: 167 IG----LAPGKTPNKVEQSL-LRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ L P K E+ ++P + L+ G VC R P C +C I
Sbjct: 155 VFDGIELPASSAPTKAERERAEAVLPEDGHECAAWNLALMEFGALVCTQRSPDCPACPIR 214
Query: 220 NLCKR 224
C+
Sbjct: 215 ERCRW 219
>gi|33519714|ref|NP_878546.1| A/G-specific adenine glycosylase [Candidatus Blochmannia
floridanus]
gi|33504059|emb|CAD83320.1| A/G-specific adenine glycosylase [Candidatus Blochmannia
floridanus]
Length = 355
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 8/187 (4%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + + T K+ ++ +G Y++
Sbjct: 29 KTIYKIWISEVMLQQTQVATVIPYYQKFIKKFPTISKLAEANINEILYIWSGLGYYKRAL 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I+I+ + P L PGIGR A ILS+A +D +I RI
Sbjct: 89 -NLHKTATIIIHHHNGVFPNNFNILLSFPGIGRSTAGAILSLALNKRFPILDGNIKRILI 147
Query: 166 RIGLAPGKT--PNKVEQSLLRIIP-----PKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R + P K+ L +I + + ++ GR +C PQC C +
Sbjct: 148 RYYSLNNQQTSPTKINNKLWSLIDSLLPLDSNYAIFNQAMMDLGRLICTHSNPQCNICPL 207
Query: 219 SNLCKRI 225
++ C+
Sbjct: 208 NSHCQSF 214
>gi|259500619|ref|ZP_05743521.1| endonuclease III [Lactobacillus iners DSM 13335]
gi|302191308|ref|ZP_07267562.1| endonuclease III [Lactobacillus iners AB-1]
gi|309807983|ref|ZP_07701909.1| putative endonuclease III [Lactobacillus iners LactinV 01V1-a]
gi|259168003|gb|EEW52498.1| endonuclease III [Lactobacillus iners DSM 13335]
gi|308168772|gb|EFO70864.1| putative endonuclease III [Lactobacillus iners LactinV 01V1-a]
Length = 208
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDVEACIKNIGLYRTKAKHLKTTATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPNNADPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|332639020|ref|ZP_08417883.1| A/G-specific adenine glycosylase [Weissella cibaria KACC 11862]
Length = 365
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 19 LYTPKELEEIFYLFSLKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ ++ + + + +L + + + + V+ ++ Q+ V
Sbjct: 4 MWDEDKIHDFRATLLNWYDEAGRADLPWRENHDPYRVWVSEIMLQQTQVQTVIPYFNRFM 63
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + + E+ L +G Y + N+ + + +++ P + L +L
Sbjct: 64 SMFPTLNDLASAPEQALLKAWEGLGYYS-RVRNMQKAAIQVRDDYQGVWPDHMAALEKLT 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPK 189
GIG A I S+AF P +D + FR+ R+ +A KT + L++I P
Sbjct: 123 GIGPYTAAAIASIAFNEPVPAIDGNAFRVFARLFKIDADIAQPKTRKVFFELGLQLIDPA 182
Query: 190 HQYNAHYWLVLHGRYVCKARK 210
+ + ++ G A+
Sbjct: 183 RPGDFNQAIMDLGSSYMSAKN 203
>gi|282860096|ref|ZP_06269172.1| A/G-specific adenine glycosylase [Prevotella bivia JCVIHMP010]
gi|282587083|gb|EFB92312.1| A/G-specific adenine glycosylase [Prevotella bivia JCVIHMP010]
Length = 337
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 67/204 (32%), Gaps = 11/204 (5%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + EL + + + + ++ ++ Q+ + T +++
Sbjct: 6 ILLQWFSEHGRELPWRATKDPYAVWLSEIILQQTRVNQGWSYWEKFMHQWSTVEQLADAS 65
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E + + +G Y + + + P + L +L G+G A I S+
Sbjct: 66 EDDVLKAWQGLGYYSRARNLHKAAQQVKALGKF---PNNYQALKQLKGVGDYTAAAIASI 122
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+F P VD +++R+ +R + +I + ++ G
Sbjct: 123 SFNEPVAVVDGNVYRVLSRYFGIDTPIDTTAGKKEFAALAQELIALDKPGIYNQAIMDFG 182
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
C P C C++ C +
Sbjct: 183 AIQCTPASPNCSRCLLLETCVAFR 206
>gi|330927738|ref|XP_003301978.1| hypothetical protein PTT_13644 [Pyrenophora teres f. teres 0-1]
gi|311322903|gb|EFQ89926.1| hypothetical protein PTT_13644 [Pyrenophora teres f. teres 0-1]
Length = 458
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 17/198 (8%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T Q + A + + + +G Y + +
Sbjct: 26 KRAYEVWVSEVMLQQTRVSTVIPYFNNWIAKWPTVQDLAAANHDDVLSVWKGLGYYSRAT 85
Query: 106 ENIISL-SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ ++ IP + L PGIGR A + S+AFG +D ++ R+
Sbjct: 86 RLHEGAKKMMAASDDAGTIPSSAAELQEFPGIGRYTAGAVSSIAFGEAEPVLDGNVARVL 145
Query: 165 NRIGLAPGKTPNKVEQS-----------LLRIIPPKH----QYNAHYWLVLHGRYVCKAR 209
+R +K P + L+ G VC R
Sbjct: 146 SRQLGLYMDVKDKKATDILWDMANQLIKHASDFPKTKTSATPGLWNQALMELGSTVCTPR 205
Query: 210 KPQCQSCIISNLCKRIKQ 227
P+C C I C+ +
Sbjct: 206 -PRCDDCPIQATCRAYSE 222
>gi|312875628|ref|ZP_07735629.1| putative endonuclease III [Lactobacillus iners LEAF 2053A-b]
gi|329920283|ref|ZP_08277067.1| putative endonuclease III [Lactobacillus iners SPIN 1401G]
gi|311088882|gb|EFQ47325.1| putative endonuclease III [Lactobacillus iners LEAF 2053A-b]
gi|328936328|gb|EGG32776.1| putative endonuclease III [Lactobacillus iners SPIN 1401G]
Length = 208
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELKWSTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPNSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDIEACIKNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPKSAEPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|119900101|ref|YP_935314.1| putative A/G-specific adenine glycosylase [Azoarcus sp. BH72]
gi|119672514|emb|CAL96428.1| putative A/G-specific adenine glycosylase [Azoarcus sp. BH72]
Length = 366
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 9/201 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + + +L + + + + ++ ++ Q+ V + T + A
Sbjct: 24 RLLDWQRTDGRHDLPWQRSADPYRIWLSEIMLQQTQVETVIPYYARFLDRFPTLADLAAA 83
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ + +G Y ++ N+ + + + + P + + LPGIGR A I +
Sbjct: 84 PVEDVMALWSGLGYYA-RARNLHRAAVAVATQHGGRFPPSAAAIAELPGIGRSTAAAIAA 142
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYNAHYWLVLH 201
A+G +D ++ R+ R G K VE L + +P +
Sbjct: 143 FAYGERAAILDGNVKRVLCRAFGIDGFPGEKAVENRLWALADALLPQAEVGRYIQAQMDL 202
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC KP C C + C
Sbjct: 203 GATVCTRGKPACTRCPFAADC 223
>gi|188991143|ref|YP_001903153.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris str. B100]
gi|167732903|emb|CAP51099.1| A/G-specific adenine glycosylase [Xanthomonas campestris pv.
campestris]
Length = 430
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 85/229 (37%), Gaps = 15/229 (6%)
Query: 13 NSPLGCLYTPKEL--EEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNV 66
+P + P L + + + +L + + + ++ ++ Q+ V
Sbjct: 69 PTPADPMPVPATLTTDAFVDRLLHWFDGHGRHDLPWQHPRAPYRVWLSEIMLQQTQVAVV 128
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T + A + + +G Y ++ N+ + + + ++P+
Sbjct: 129 IPYFQKFVASFPTLADLAAADNDTVMAHWAGLGYYA-RARNLHAAAKQCVALHAGELPRD 187
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI 185
+ L LPGIGR A ILS A+ +D ++ R+ + G+A VE+ L ++
Sbjct: 188 FDALLALPGIGRSTAGAILSQAWNDRFPIMDGNVKRVLTRIHGIAGYPGLPVVEKQLWQL 247
Query: 186 -------IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+P + + G +C +P C C + C ++
Sbjct: 248 AANHVAHVPAGRLADYTQAQMDFGATLCTRARPACMVCPLQENCVARRE 296
>gi|74025410|ref|XP_829271.1| endonuclease III [Trypanosoma brucei TREU927]
gi|70834657|gb|EAN80159.1| endonuclease III, putative [Trypanosoma brucei]
Length = 259
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++A++LSAQ+ D A L + TP+ + + E KL +I +G + K+ NI
Sbjct: 49 YHILLALMLSAQTKDHVTAAAMHSLIDHGCTPETIYKMPESKLNEFISKVGFHNTKARNI 108
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ + ++ +P++ EGL LPG+G K A++ L A + VDTH+ RI+ R
Sbjct: 109 KAATESILQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQEADSVVIGIGVDTHVHRIAQRF 168
Query: 168 GLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR- 224
P P ++L +P K+ + LV G+ +C R P+C C S LC
Sbjct: 169 HWVPSTVKSPEDTRKALEAWLPAKYWGEINGMLVGLGQTICTPRIPRCSECPASGLCPSA 228
Query: 225 IKQ 227
++
Sbjct: 229 FRE 231
>gi|15838507|ref|NP_299195.1| A/G-specific adenine glycosylase [Xylella fastidiosa 9a5c]
gi|9107004|gb|AAF84715.1|AE004010_12 A/G-specific adenine glycosylase [Xylella fastidiosa 9a5c]
Length = 357
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 10/203 (4%)
Query: 34 LKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
++ + + + ++ ++ Q+ V E T ++ A +
Sbjct: 22 DQYGRHHLPWQHPRTPYRVWISEIMLQQTQVAVVIPYFLRFLERFPTLPELAAADIDAVM 81
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G Y + + + + +P+ L LPGIGR ILS A+
Sbjct: 82 AHWAGLGYYARARHLHAAAKRCVELHGGD-LPRDQNALQALPGIGRSTTAAILSQAWNDR 140
Query: 153 TIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRII-------PPKHQYNAHYWLVLHGRY 204
+D +I R+ +R+ + + +E+ L + P + + G
Sbjct: 141 APILDGNIKRVLSRLHGIVGWSGQSMIEKELWELAEAYVLQPPTGRLADYTQAQMDFGAT 200
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC +P C C + + C ++
Sbjct: 201 VCTRLRPACLICPLQDGCVAWRE 223
>gi|57505714|ref|ZP_00371640.1| A/G-specific adenine glycosylase [Campylobacter upsaliensis RM3195]
gi|57015987|gb|EAL52775.1| A/G-specific adenine glycosylase [Campylobacter upsaliensis RM3195]
Length = 328
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 10/208 (4%)
Query: 25 LEEIFYLFSLKWPSP-KGELYYVN-------HFTLIVAVLLSAQSTDVNV-NKATKHLFE 75
+E++ + + + L + N + + ++ ++ Q+ V + +
Sbjct: 2 IEKLQKNLLKWYENNGRKTLPWRNLQNDANRAYAVYISEIMLQQTQVKVVLERFYFPFLQ 61
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E +L + +G Y ++ N+ + + EF +P+ E L +L G
Sbjct: 62 KFPTLLSLANAKEDELLKAWQGLGYYS-RARNLKKAARQCVAEFGGLLPRKREDLLKLCG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
IG A + + VD +I RI R+ + ++E ++ K +N +
Sbjct: 121 IGAYTAGAVACFGYDACESFVDANISRILKRLFALQNPSQKELELKARLLLNKKEPFNHN 180
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G +C + P+C+ C ++ CK
Sbjct: 181 QALLDVGALLCLPKNPKCKLCPLNAFCK 208
>gi|320100933|ref|YP_004176525.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurococcus mucosus
DSM 2162]
gi|319753285|gb|ADV65043.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurococcus mucosus
DSM 2162]
Length = 223
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY---IRTIGIYRKKS 105
F ++VAV+LS ++D N KA L EI I + +R G+YR ++
Sbjct: 25 FEVLVAVVLSQNTSDRNAVKAIARLREIGQGRITPQVILSMEQHMLEGILRPAGMYRNRA 84
Query: 106 ENIISLSHILINEFDNKI-----------PQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+ L+ + + + L LPG+G K A+V+L FGIP
Sbjct: 85 RVLRKLAELFQEPGFTERLTAEVTRAGDVNEARRRLMELPGVGEKTADVVLLRYFGIPVF 144
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTHI RI+ R+G + V + P + H +L+ HGR +CKARKP C
Sbjct: 145 PVDTHISRITRRMGFTETGRYSDVSSFWMENTSPWNYLELHLYLITHGRRICKARKPLCD 204
Query: 215 SCIISNLCKRIKQ 227
C++ +LCK +Q
Sbjct: 205 ECVLRDLCKHYQQ 217
>gi|296536555|ref|ZP_06898640.1| A/G-specific adenine glycosylase [Roseomonas cervicalis ATCC 49957]
gi|296263120|gb|EFH09660.1| A/G-specific adenine glycosylase [Roseomonas cervicalis ATCC 49957]
Length = 386
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 14/202 (6%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + L + + + + ++ ++ Q+T V + + + + + A
Sbjct: 25 LLEWYDRHRRALPWREAARDPYRIWLSEVMLQQTTVAAVTPRWRRFLDRFPSVEALAAAP 84
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +G Y + + P T+EGL LPGIG A + ++
Sbjct: 85 WAEVAEEWAGLGYYARARNLH---ACAQAVAARGGFPDTVEGLRALPGIGAYTAASVAAI 141
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNK-------VEQSLLRIIPPKHQYNAHYWLVL 200
AFG + +D ++ R++ RI + P + + + + L
Sbjct: 142 AFGRAVVPLDGNVERVTARIAAVEEELPGARPRLAALAQGWMGQEEAAARPADFVQALFD 201
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G +C R P C C C
Sbjct: 202 LGATICTPRSPACALCPWRGAC 223
>gi|309803994|ref|ZP_07698076.1| putative endonuclease III [Lactobacillus iners LactinV 11V1-d]
gi|308163913|gb|EFO66178.1| putative endonuclease III [Lactobacillus iners LactinV 11V1-d]
Length = 206
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 1/181 (0%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 12 ARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSLA 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV+
Sbjct: 72 AANISDIEACIKNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANVV 131
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ GR
Sbjct: 132 LAEAFGVPSIAVDTHVMRIAKQFKIVPNNADPSQIETILENIMPEKDWIKLHHAMIAFGR 191
Query: 204 Y 204
Y
Sbjct: 192 Y 192
>gi|78067596|ref|YP_370365.1| A/G-specific DNA-adenine glycosylase [Burkholderia sp. 383]
gi|77968341|gb|ABB09721.1| A/G-specific DNA-adenine glycosylase [Burkholderia sp. 383]
Length = 368
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLVAWQREHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVIPYYTRFLERYPDVAALAAAPTDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|84497241|ref|ZP_00996063.1| putative adenine glycosylase [Janibacter sp. HTCC2649]
gi|84382129|gb|EAP98011.1| putative adenine glycosylase [Janibacter sp. HTCC2649]
Length = 304
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+++ + + L + + + ++++ +++ Q+ V A T
Sbjct: 10 DVQSLHEAVFDWYAVHSRPLPWRDPSCSPWGVLLSEVMAQQTPLARVEPAWHEWMSRWPT 69
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P + ++ +G R+ + + ++ +P+ L LPGIG
Sbjct: 70 PADLARESPGEVVRAWGRLGYPRRALR-LREAAVAIVERHGGAVPRDQGQLLALPGIGDY 128
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIG---LAPGKTPNKVEQSLLR-IIP--PKHQYN 193
A + + AFG ++ VDT++ R+ RI + + E L R ++P +
Sbjct: 129 TAAAVAAFAFGDRSVVVDTNVRRVEARIVSGLAQAAPSLTRAEVDLARDLLPVVDQDAAV 188
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC AR P+C+ C + + C
Sbjct: 189 WNVAVMELGALVCTARAPRCEECPVRSRC 217
>gi|111225865|ref|YP_716659.1| A/G-specific adenine glycosylase [Frankia alni ACN14a]
gi|111153397|emb|CAJ65153.1| A/G-specific adenine glycosylase [Frankia alni ACN14a]
Length = 330
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ ++ Q+ V + + TP + A
Sbjct: 51 DWFAAAARDLPWRRPGTTPWAVLVSEVMLQQTPVTRVLPVWQAWLDRWPTPAALAAQPAG 110
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + ++ +IP L+ L LPGIG A + + AF
Sbjct: 111 EAVRAWGRLGYPRRALRLHQAAT-AVVERHGGEIPADLDALLALPGIGTYTARAVAAFAF 169
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ----SLLRIIP--PKHQYNAHYWLVLHGR 203
VD ++ R+ R P V + ++ ++P P+ L+ G
Sbjct: 170 RQRHPVVDVNVRRLFARAVEGRADHPATVGRRDLAAVAELLPAEPETAAMTSAALMELGA 229
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C +C + + C
Sbjct: 230 LVCVARTPRCAACPLLHRC 248
>gi|161523698|ref|YP_001578710.1| A/G-specific adenine glycosylase [Burkholderia multivorans ATCC
17616]
gi|189351538|ref|YP_001947166.1| A/G-specific adenine glycosylase [Burkholderia multivorans ATCC
17616]
gi|160341127|gb|ABX14213.1| A/G-specific adenine glycosylase [Burkholderia multivorans ATCC
17616]
gi|189335560|dbj|BAG44630.1| A/G-specific adenine glycosylase [Burkholderia multivorans ATCC
17616]
Length = 370
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFAPRLIAWQRQHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVVPYYTRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALADLPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGIEGFPGEKRV 174
Query: 179 EQSLLRI----IP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAAHPDDVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|76798408|ref|ZP_00780649.1| A/G-specific adenine glycosylase [Streptococcus agalactiae 18RS21]
gi|76586240|gb|EAO62757.1| A/G-specific adenine glycosylase [Streptococcus agalactiae 18RS21]
Length = 363
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 9/196 (4%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + + V+ ++ Q+ V K E + + E
Sbjct: 3 LLGWYDQEKRDLPWRRTTNPYYIWVSEIMLQQTQVNTVIPYYKRFLEWFPQIKDLADAPE 62
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++L +G Y + N+ + ++ +F P T + + L GIG A I S++
Sbjct: 63 EQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIASLKGIGPYTAGAIASIS 121
Query: 149 FGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F +P VD ++ R+ + K + + +I P + + L+ G
Sbjct: 122 FNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQALMDLGT 181
Query: 204 YVCKARKPQCQSCIIS 219
+ A+ P+ I
Sbjct: 182 DIESAKTPRPDESPIR 197
>gi|195148504|ref|XP_002015213.1| GL19581 [Drosophila persimilis]
gi|194107166|gb|EDW29209.1| GL19581 [Drosophila persimilis]
Length = 396
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L TP + + +L+ + + Y+ K++ +
Sbjct: 205 FHKLVALMLSSQTKDQTTYEAMTRLKARTLTPDSLKDMPIGELETLLHPVSFYKNKAKYL 264
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRI 167
+ ILI+++D+ IP ++ L LPG+G K A++ +++A+ IGVD H+ RISNR+
Sbjct: 265 KQTTQILIDKYDSDIPNNVKELIALPGVGPKMAHICMAVAWDKLTGIGVDVHVHRISNRL 324
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P K P + +L +P ++ V G+ VC KP C C+ ++C
Sbjct: 325 GWLPRPTKEPEQTRVALESWLPSTLWAEVNHLFVGFGQTVCTPLKPNCGQCLNKDICPSA 384
Query: 226 K 226
K
Sbjct: 385 K 385
>gi|313886523|ref|ZP_07820239.1| A/G-specific adenine glycosylase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924069|gb|EFR34862.1| A/G-specific adenine glycosylase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 362
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 10/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + +L + + + + ++ ++ Q+ E T +
Sbjct: 4 LLNKLHSWYQENHRKLPWRDIHDPYRIWLSEVILQQTRIDQGTSYYLRFVEHYPTVSDLA 63
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A ++ +G Y ++ N+ + I++ + P + + LPGIG A +
Sbjct: 64 AAPLDEVLKLWEGLGYYS-RARNLHRAAQIIVQDLGGTFPTDYKSVRALPGIGDYTAGAV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK------HQYNAHYWL 198
LS A+ P VD ++ R+ +R+ + + + H + +
Sbjct: 123 LSFAYDQPYPAVDGNVLRVLSRLYASEEPIDTTQGKKYYTALARHLVEKAPHPGLHNQAM 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ G +C + C C I + C
Sbjct: 183 IELGALICTPQLCDCTRCPIRSECPS 208
>gi|268593070|ref|ZP_06127291.1| A/G-specific adenine glycosylase [Providencia rettgeri DSM 1131]
gi|291311337|gb|EFE51790.1| A/G-specific adenine glycosylase [Providencia rettgeri DSM 1131]
Length = 350
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 80/211 (37%), Gaps = 10/211 (4%)
Query: 24 ELEEIFYLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E ++ + + L + + + + ++ ++ Q+ V + +
Sbjct: 2 EAQQFSSAVLNWYHKYGRKTLPWQQEKSSYHVWLSEVMLQQTQVSTVIPYFEKFISRFED 61
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ ++ + +G Y ++ N+ + ++ ++ P T + + LPG+GR
Sbjct: 62 VTALANAPLDEVLHLWTGLGYYA-RARNLHKAAQVIATQYGGSFPTTFDEVLALPGVGRS 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNA 194
A ILS++ +D ++ R+ R G +VE L I P
Sbjct: 121 TAGAILSLSQKQHYPILDGNVKRVLARAYAVDGWPGKKEVENRLWEISTDVTPQVGVEFF 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C KP+C+ C ++ C
Sbjct: 181 NQAMMDLGAMICTRSKPKCELCPLNFGCMAY 211
>gi|311896818|dbj|BAJ29226.1| putative adenine glycosylase [Kitasatospora setae KM-6054]
Length = 301
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + + ++V+ + Q+ V A E TP + A +
Sbjct: 23 WYETHARDLPWRAPDASPWAVMVSEFMLQQTPVKRVLPAYAAWLERWPTPAALAADAPGE 82
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + ++P L LPG+G A + S AF
Sbjct: 83 AVRMWGRLGYPRRALR-LHGAAVAITERHGGEVPADHAELLALPGVGEYTAAAVASFAFR 141
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP--PKHQYNAHYWLVLHGRY 204
+DT++ R+ R N ++ ++P + ++ G
Sbjct: 142 QRHAVLDTNVRRVFARAVTGVEYPANATTAAERRTARELLPAGDERAATWAVAVMELGAL 201
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 202 VCTARGPECGGCPLLADC 219
>gi|221199990|ref|ZP_03573033.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD2M]
gi|221206855|ref|ZP_03579867.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD2]
gi|221173510|gb|EEE05945.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD2]
gi|221180229|gb|EEE12633.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD2M]
Length = 370
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFAPRLIAWQRQHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVVPYYTRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGIEGFPGEKRV 174
Query: 179 EQSLLRI----IP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAAHPDDVSAYTQGLMDLGATLCVRGKPDCTRCPFAGDC 226
>gi|239817306|ref|YP_002946216.1| A/G-specific adenine glycosylase [Variovorax paradoxus S110]
gi|239803883|gb|ACS20950.1| A/G-specific adenine glycosylase [Variovorax paradoxus S110]
Length = 353
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 13/200 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V E T + + E ++
Sbjct: 27 RSALPWQNTRDPYRVWLSEVMLQQTQVSTVLGYFARFLERFPTVRALANGTEDEVFGLWS 86
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ F + P+T L LPGIGR + I + FG +
Sbjct: 87 GLGYYS-RARNMHRCAQEVVARFGGEFPRTAAELETLPGIGRSTSAAIAAFCFGERVAIL 145
Query: 157 DTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCK 207
D ++ R+ R+ ++ + +++PP Q ++ G VC
Sbjct: 146 DGNVKRVLTRVLGFGGDMSSSAQERALWDQATQLLPPAEQKEAIASYTQGVMDLGATVCL 205
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
RKP C C ++ C +++
Sbjct: 206 PRKPSCMICPLNKACVGLRE 225
>gi|119472216|ref|ZP_01614395.1| A/G-specific adenine glycosylase [Alteromonadales bacterium TW-7]
gi|119445034|gb|EAW26329.1| A/G-specific adenine glycosylase [Alteromonadales bacterium TW-7]
Length = 353
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 10/215 (4%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
++ + + L + + + V+ ++ Q+ V V + +
Sbjct: 4 LNKEQSHWFSKQVVDWYHLHGRKTLPWQLGKTPYKVWVSEVMLQQTQVVTVIPYFEKFMK 63
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ E ++ ++ +G Y ++ N+ + I+ ++++ PQTLE + LPG
Sbjct: 64 SFPDIIALANAEEDQVLHHWTGLGYYA-RARNLHKTAKIVRDKYNGLFPQTLEEVMDLPG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPKH 190
IGR A +LS++ G +D ++ R+ R + G KVE L ++ P +
Sbjct: 123 IGRSTAGAVLSLSLGQHHPILDGNVKRVLARYFMVEGWYGVKKVENQLWHLSSQLTPKNN 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++ G +C + C+ C +++ C
Sbjct: 183 VTEFNQAMMDLGASLCSRSRFDCEPCPLNSRCGAF 217
>gi|315181254|gb|ADT88168.1| A/G-specific adenine DNA glycosylase [Vibrio furnissii NCTC 11218]
Length = 341
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
TPK+ +E + + + ++V+ ++ Q+ V V +
Sbjct: 6 LTPKQFQEHLLTWQRHHGRHDLPWQQNPSPYRVLVSEVMLQQTQVVTVIPYFERWMASFP 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E + N+ + +G Y ++ N+ + + + ++ + P + L +PG+GR
Sbjct: 66 TIEALANATEDAVMNHWQGLGYYS-RARNLRKAALYIQDTWNGEFPADVNALQNIPGVGR 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYN 193
A I + AF VD ++ R+ R G ++ + P +
Sbjct: 125 YTAGAIAAFAFNTYGPIVDGNVKRLFCRYFGIEGVPGTSAVDKQLWSTAEAYTPTHNNRQ 184
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G +CK + P C +C + CK +
Sbjct: 185 YAQGLLDMGATLCKPKNPACDACSFTTTCKAYQ 217
>gi|299068040|emb|CBJ39254.1| adenine DNA glycosylase [Ralstonia solanacearum CMR15]
Length = 382
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 13/235 (5%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQS 61
+ ++S ++P+ + + + + + + ++ ++ Q+
Sbjct: 4 TPRRSRRAAPSAPVLPPLPEDFAVRVIA-WQRRHGRHHLPWQNTGDAYRVWLSEIMLQQT 62
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
V E T Q + A + +G Y ++ N+ + I++ E
Sbjct: 63 QVSAVLGYYARFVERFPTVQALAAAPADDVMAAWAGLGYYT-RARNLHRCAQIVVAEHGG 121
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQ 180
P+ E L LPGIGR A I + ++G+ +D ++ R+ R+ G +K VE+
Sbjct: 122 AFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAILDGNVKRVFARVFGIDGFPGDKRVEE 181
Query: 181 SLLR-----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQ----SCIISNLCKRIK 226
++ R + P + L+ G VC KP C +C + +LC+ +
Sbjct: 182 TMWRIAETVLPPADGIQSYTQGLMDLGATVCTRGKPACLTGERACPLESLCEARR 236
>gi|254386480|ref|ZP_05001783.1| adenine glycosylase [Streptomyces sp. Mg1]
gi|194345328|gb|EDX26294.1| adenine glycosylase [Streptomyces sp. Mg1]
Length = 312
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 12/231 (5%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLL 57
+++ P+ TP + + +L + + ++V+ +
Sbjct: 1 MTATPVPPAHATVPVTTA-TPDVSHALHSPVIAWFDEHARDLPWRRPEAGPWGVMVSEFM 59
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + P ++ A + +G R+ + + +
Sbjct: 60 LQQTPVSRVLPVYEQWLARWPRPAELAAEAPGEAVRAWGRLGYPRRALR-LHGAAVAITE 118
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+P+ L LPGIG A + S A+G +DT++ R+ R PN
Sbjct: 119 RHGGDVPRDHAQLLSLPGIGEYTAAAVASFAYGQRHAVLDTNVRRVFARTATGVEYPPNA 178
Query: 178 V----EQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++P + G VC A+ P C C ++ LC
Sbjct: 179 TTAAERRLARALLPEDEETAARWAAASMELGALVCTAKSPDCARCPVAGLC 229
>gi|189501613|ref|YP_001957330.1| A/G-specific adenine glycosylase [Candidatus Amoebophilus asiaticus
5a2]
gi|189497054|gb|ACE05601.1| A/G-specific adenine glycosylase [Candidatus Amoebophilus asiaticus
5a2]
Length = 373
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 9/203 (4%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ L + + + + ++ ++ Q+ + E T + +
Sbjct: 23 KLIEWYQHHHRALPWRETKDPYKIWLSEIILQQTRVAQGLPYYQRFIENYPTIHDLASAS 82
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E + + +G Y ++ N+ + + ++ +F K P + L LPGIG A I S+
Sbjct: 83 ETAILRVWQGLGYYT-RARNLHACARTIVTQFQGKFPNNYKALLSLPGIGVYTAAAIASI 141
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AF P +D +++R+ RI + K + Q +I + ++ G
Sbjct: 142 AFKEPIPVIDGNVYRVLARIFDIETAINSTKGKHIFNQLAQTLISKTAPDIYNQAIMEFG 201
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
C KP C +CI C
Sbjct: 202 AIQCTPLKPLCNTCIFKMDCSAF 224
>gi|148260502|ref|YP_001234629.1| HhH-GPD family protein [Acidiphilium cryptum JF-5]
gi|146402183|gb|ABQ30710.1| A/G-specific DNA-adenine glycosylase [Acidiphilium cryptum JF-5]
Length = 347
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 17/207 (8%)
Query: 30 YLFSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+ V E T
Sbjct: 9 ENLLRWYHVHRRILPWRAGPGTLPDPYHVWLSEIMLQQTVVATVIPYFHRFIERFPTISD 68
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + ++ +G Y + I P TL+GL LPGIG A
Sbjct: 69 LAVAVDDEILGLWAGLGYYARARNLI---RCARAVAEAGGFPVTLDGLRALPGIGPYTAA 125
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP-------PKHQYNAH 195
I ++AF IP + VD ++ R++ R+ P + + +
Sbjct: 126 AIGAIAFDIPVVPVDGNVERVTARMFAIEEALPAAKDAIAVAAARLGAQAAAQSSPGDFA 185
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L G VC R P C C + C
Sbjct: 186 QALFDLGATVCTPRSPSCMVCPWRDGC 212
>gi|134046103|ref|YP_001097589.1| hypothetical protein MmarC5_1071 [Methanococcus maripaludis C5]
gi|132663728|gb|ABO35374.1| protein of unknown function DUF123 [Methanococcus maripaludis C5]
Length = 356
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+ ++SA++ D K +K LF+ TP+++ I L+ + G Y+ K++N
Sbjct: 38 AFKILVSTVISARTKDETTAKVSKELFKKVKTPKELSEISLDNLEKLVHPAGFYKTKAKN 97
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L IL+ E+D+KIP ++E L LPG+GRK AN+++++AF I VDTH+ RI+NR
Sbjct: 98 LKKLGKILLEEYDSKIPNSIEELITLPGVGRKTANLVMTLAFDEYAICVDTHVHRITNRW 157
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
+ P E L + +P + + LV+ G+ +C P+C C I +C
Sbjct: 158 NYVDTEFPENTEMELRKKLPKDYWKRINNLLVVFGQEICSPI-PKCDKCFSEIRKICPHY 216
>gi|309809863|ref|ZP_07703713.1| putative endonuclease III [Lactobacillus iners SPIN 2503V10-D]
gi|312874237|ref|ZP_07734271.1| putative endonuclease III [Lactobacillus iners LEAF 2052A-d]
gi|315653548|ref|ZP_07906468.1| endonuclease III [Lactobacillus iners ATCC 55195]
gi|308169815|gb|EFO71858.1| putative endonuclease III [Lactobacillus iners SPIN 2503V10-D]
gi|311090307|gb|EFQ48717.1| putative endonuclease III [Lactobacillus iners LEAF 2052A-d]
gi|315488910|gb|EFU78552.1| endonuclease III [Lactobacillus iners ATCC 55195]
Length = 208
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELKWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPNSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDIEACIKNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPKSAEPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|258646174|ref|ZP_05733643.1| A/G-specific adenine glycosylase [Dialister invisus DSM 15470]
gi|260403560|gb|EEW97107.1| A/G-specific adenine glycosylase [Dialister invisus DSM 15470]
Length = 351
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 86/210 (40%), Gaps = 10/210 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV-----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+E + + + +L + N + + V+ ++ Q+ V + T
Sbjct: 8 QEWPHKLLAWFDQNRRDLPWREGRPRNPYYVWVSEIMLQQTRTEAVKPYFESWKRRFPTI 67
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E + + + +G Y ++ N+ + + ++ IP+ + + LPGIG
Sbjct: 68 EALAEAKEADVLHAWQGLGYYS-RARNLHKAAREIAEKYGGAIPEDKKDVRALPGIGEYT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIPP---KHQYNAHY 196
A ILSMA+G VD ++ R+ R G+ + + + ++ + +
Sbjct: 127 AGAILSMAYGKHEAAVDGNVLRVYARLYGIESDILKSAGRKEITTLVEKTLPARAGDFNE 186
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G VC + P+C+ C + C ++
Sbjct: 187 ALMDLGSEVCVPKHPKCEKCPLHGECAALR 216
>gi|315498146|ref|YP_004086950.1| a/g-specific adenine glycosylase [Asticcacaulis excentricus CB 48]
gi|315416158|gb|ADU12799.1| A/G-specific adenine glycosylase [Asticcacaulis excentricus CB 48]
Length = 360
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 80/224 (35%), Gaps = 13/224 (5%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV---------NHFTLIVAVLLSAQSTDVNV 66
+ T + + + L + + + + ++ ++ Q+T +
Sbjct: 3 VSIERTDENVSSARQRLLGWYDRNARVLPWREGPGAALKADPYRVWMSEVMLQQTTVPHA 62
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + + + A ++++ +G Y ++ N++ + ++NE P
Sbjct: 63 TPYFEKFTALWPSVADLAAAPDERVMAEWAGLGYYS-RARNLLKCARAVVNEHGGVFPAD 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLL 183
L +LPG G A +++ AFG VD +I R+ +R+ P + +
Sbjct: 122 EAALLKLPGFGPYTAAAVMAFAFGKAANVVDGNIERVMSRLYAVKTPVPQARPLLRELAA 181
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
R + + L+ VC+ + C C + C +
Sbjct: 182 RWVREDRARDWPQALMDLSASVCRPKSASCLICPLREDCAAFAE 225
>gi|195580555|ref|XP_002080101.1| GD21665 [Drosophila simulans]
gi|194192110|gb|EDX05686.1| GD21665 [Drosophila simulans]
Length = 388
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + TP K+ + +L+N + + Y+ K++ +
Sbjct: 197 FQNLVALMLSSQTKDQTTYEAMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYL 256
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
IL++++ + IP ++ L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 257 KQTVDILMDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRL 316
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 317 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPS 375
>gi|329118305|ref|ZP_08247014.1| A/G-specific adenine glycosylase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465529|gb|EGF11805.1| A/G-specific adenine glycosylase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 378
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 8/204 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + + + + + ++ ++ Q+ V + T + A E +
Sbjct: 44 RWQKQHGRHNLPWHSRDPYRVWLSEIMLQQTQVSTVARYYPRFLAAFSTAAALAAAPEDQ 103
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + + E P++ GL L G+GR A I + AF
Sbjct: 104 VLALWQGLGYYS-RARNLHKAAKQIAAEHGGAFPRSRAGLETLSGVGRSTAAAIAAFAFC 162
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPK--HQYNAHYWLVLHGR 203
+D ++ R+ R+ G +K + ++P L+ G
Sbjct: 163 QRETILDGNVKRVLCRVFAREGDPADKKFEQSLWTLAESLLPADPADMPAYTQGLMDLGA 222
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
VC KPQC +C ++++C+ KQ
Sbjct: 223 TVCTRAKPQCPACPMADVCQARKQ 246
>gi|40714570|gb|AAR88543.1| RE40459p [Drosophila melanogaster]
Length = 391
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + TP K+ + +L+N + + Y+ K++ +
Sbjct: 202 FQNLVALMLSSQTKDRTTYEAMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYL 261
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
IL +++ + IP ++ L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 262 KQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRL 321
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 322 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPS 380
>gi|291445640|ref|ZP_06585030.1| adenine glycosylase [Streptomyces roseosporus NRRL 15998]
gi|291348587|gb|EFE75491.1| adenine glycosylase [Streptomyces roseosporus NRRL 15998]
Length = 304
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 76/231 (32%), Gaps = 20/231 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLL 57
+++ S S Q L+TP + +L + + ++V+ +
Sbjct: 1 MTAMTSPSPQTPPAAASLHTP---------VIGWFEQHARDLPWRRPEAGAWGVMVSEFM 51
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + P + A + +G R+ + + +
Sbjct: 52 LQQTPVSRVLPVYEQWLARWPRPADLAAEAPGEAVRAWGRLGYPRRALR-LHGAAQAITE 110
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+P L LPGIG A + S A+G +DT++ R+ R PN
Sbjct: 111 RHGGDVPSEHAQLLALPGIGEYTAAAVASFAYGQRHAVLDTNVRRVFARAATGVQYPPNA 170
Query: 178 V----EQSLLRIIP--PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++P + + G VC AR C C I++ C
Sbjct: 171 TTAAERKLARALLPEEDERAARWAAATMELGALVCTARNEDCDRCPIASRC 221
>gi|311063837|ref|YP_003970562.1| MutY A/G-specific adenine DNA glycosylase [Bifidobacterium bifidum
PRL2010]
gi|310866156|gb|ADP35525.1| MutY A/G-specific adenine DNA glycosylase [Bifidobacterium bifidum
PRL2010]
Length = 326
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 27 EIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ L S W + +L + + ++V+ ++S Q+ V +
Sbjct: 8 RVRALLSAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMRVWPDVTA 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++ +G R+ + + ++ ++ ++PQT + LT LPGIG A+
Sbjct: 68 LAGASTAEVITAWGRLGYPRRALR-LQECARVVFEQYHGRLPQTYDELTALPGIGDYTAS 126
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGL---APGKTPNKVEQSLL-RIIPPKHQYN----- 193
+LS AFG+ VDT+I R+ +R+ L + G + E++L R++P + +
Sbjct: 127 AVLSFAFGVRIAVVDTNIRRVLSRVFLGVESRGGAASPAERALAGRVLPQDDEMDVRDAI 186
Query: 194 -----------------------------AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC A+ P C C I C
Sbjct: 187 EAANARETVNAPESAIREVPQRSTRPSVIWNQSVMELGALVCTAKNPLCDQCPIGEHC 244
>gi|241895297|ref|ZP_04782593.1| A/G-specific adenine glycosylase [Weissella paramesenteroides ATCC
33313]
gi|241871603|gb|EER75354.1| A/G-specific adenine glycosylase [Weissella paramesenteroides ATCC
33313]
Length = 366
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 85/215 (39%), Gaps = 10/215 (4%)
Query: 16 LGCLYTPKELEEIFYLFSLKWP-SPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATK 71
+ ++ +++E + + +L + + + V+ ++ Q+ V +
Sbjct: 1 MIEMWHEEKIEAFRQTLLDWYDREGRADLPWRRDKEPYHVWVSEIMLQQTQVQTVIPYFE 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T + E++L +G Y + N+ + ++N++D P ++ L
Sbjct: 61 RFMKNFPTITDLAMAPEQRLLKTWEGLGYYS-RVRNMQKAAQQVVNDYDGVWPSDMQALQ 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRII 186
+L GIG A I S++F P +D + FR+ R+ +A KT + R+I
Sbjct: 120 QLTGIGPYTAAAIASISFDEPVPAIDGNAFRVFARLFKIDADIAQAKTRKIFFEVGQRLI 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
P+ + + ++ G A+ + +
Sbjct: 180 DPERPGDFNQAIMDLGSSYMSAKNYDSEHSPVKKF 214
>gi|282164121|ref|YP_003356506.1| putative endonuclease III [Methanocella paludicola SANAE]
gi|282156435|dbj|BAI61523.1| putative endonuclease III [Methanocella paludicola SANAE]
Length = 225
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ K EI + + G F +++ +LS +TD N + A + LF + D
Sbjct: 1 MNDKKRTAEISKRLIEHYGTYNG--KKGEPFGVLINTILSQNTTDRNSSVAFQRLFSVYD 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS--------LSHILINEFDNKIPQTLEGL 130
TP+K+ E K+ I+ G+Y K+ I + + L
Sbjct: 59 TPKKLANAPEDKIAELIKIGGLYTIKARRIKEISRLILDDYGGDIDFVCTANPEAARKEL 118
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK 189
+ G+G K A+ +L A G I VDTH+FR++ R+G+ P K + + L+ +P
Sbjct: 119 LSIEGVGPKTADCVLLFACGDDVIPVDTHVFRVTKRLGIVPEKADHEETHRILMENVPAG 178
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + H L+ GR +C+A+ P+ C + ++C ++
Sbjct: 179 KRGSVHVDLIRFGREICRAQSPKHDECFLIDVCDYARK 216
>gi|324997777|ref|ZP_08118889.1| A/G-specific adenine glycosylase [Pseudonocardia sp. P1]
Length = 287
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L S + + +L + + ++V+ + Q+ V E P + A
Sbjct: 4 ELISPWFRAHARDLPWRRPETTPWGVLVSEFMLQQTPVARVEPIWLDWMERWPLPSSLAA 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + + + + +P +E L LPGIG A ++
Sbjct: 64 APRSEVLRAWGKLGYPRRAIR-LHDAAAAIAGQHGDAVPDDVEALEALPGIGSYTARAVV 122
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW------LV 199
+ +G+ VDT++ R+ R G ++ L + L+
Sbjct: 123 AFGYGLRAPVVDTNVRRVVARAVHGQGDAGPARTRADLADVDALLPGGHAEAAVVSAGLM 182
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C +++ C
Sbjct: 183 ELGAVVCTARSPRCADCPVAHTC 205
>gi|312218904|emb|CBX98849.1| similar to TPA: DNA repair protein Ntg1 [Leptosphaeria maculans]
Length = 423
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 29/253 (11%)
Query: 1 MVSSKKSDSYQGNSPLGCLYT---------PKELEEIFYLFSLKWPSPKGELYY------ 45
+ + P + T P EEI+ L +
Sbjct: 104 LPGQEAKPKKARRQPAKKVKTENGGVKVEPPSNWEEIYALTREMRHENIAPVDTMGCESL 163
Query: 46 ----VNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNY 94
+ F ++A++LS+Q+ D A + + E + ++ + L +
Sbjct: 164 AEKNRSPRDRRFQTLIALMLSSQTKDTVTAVAMRSMQEGIPGGFNLESVLALEPAALNAF 223
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I +G + K++ I + IL +++++ IP T+EGL LPG+G K A + LS A+G
Sbjct: 224 ICKVGFHNLKTKYIKQTAEILRDKWNSDIPDTVEGLISLPGVGPKMAYLTLSAAWGRDEG 283
Query: 155 G-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VD H+ RI+N G + P + +L +P ++ + LV G+ +C +C
Sbjct: 284 IGVDVHVHRITNLWGWHKTQNPEQTRAALESWLPRDKWHDINNLLVGFGQTICLPVGRKC 343
Query: 214 QSCIISN--LCKR 224
C +++ LC
Sbjct: 344 GECKLADRGLCPS 356
>gi|284034293|ref|YP_003384224.1| HhH-GPD family protein [Kribbella flavida DSM 17836]
gi|283813586|gb|ADB35425.1| HhH-GPD family protein [Kribbella flavida DSM 17836]
Length = 297
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ L + + ++V+ + Q+ V A + P + A +
Sbjct: 19 WYADNARTLPWREPDAGAWAVMVSEFMLQQTPVARVLPAYEAWMRRWPKPGDLAAEAPGE 78
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + ++ ++P+ L LPG+G A I S A+G
Sbjct: 79 AVRAWDRLGYPRRALR-LHAAATAIVELHGGEVPRDHAALLALPGVGTYTAAAIASFAYG 137
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQY--NAHYWLVLHGRY 204
VDT++ R+ R + + R+ +P + G
Sbjct: 138 QRHAVVDTNVRRVFARALAGLAQPSISPTAADQRLAVSALPDDEPTAARWAVATMELGAL 197
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR P+C C I + C
Sbjct: 198 VCTARTPRCAECPIRSQC 215
>gi|153951575|ref|YP_001398900.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939021|gb|ABS43762.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 339
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVENLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC ++ +C C + + C+
Sbjct: 180 KELLNVNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQ 220
>gi|171680616|ref|XP_001905253.1| hypothetical protein [Podospora anserina S mat+]
gi|170939935|emb|CAP65161.1| unnamed protein product [Podospora anserina S mat+]
Length = 582
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 16/197 (8%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V T + + E+++ N +G Y +
Sbjct: 155 RRAYEVWISEIMLQQTRVATVIAYWNKWMTKWPTIEDLAQATEEEVVNMWTGLGYYSRAR 214
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ + +PG+GR A I ++ FG VD ++ R+ +
Sbjct: 215 RIHAGAQKVVTEMQGLLPDTVEGLMKHVPGVGRYTAGAISAIVFGEAEPMVDGNVMRVLS 274
Query: 166 RIGLAPGKTP---------NKVEQSLLRIIPP------KHQYNAHYWLVLHGRYVCKARK 210
R G + L++++ + L+ G +C K
Sbjct: 275 RQMGLMGDVKGDKRVVDVLWEAADRLVKVVAEADGEEGEKPGLWGQALMELGSTICTP-K 333
Query: 211 PQCQSCIISNLCKRIKQ 227
PQC C ++ C +
Sbjct: 334 PQCGKCPVTESCMAYAE 350
>gi|116328197|ref|YP_797917.1| A/G-specific DNA glycosylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330921|ref|YP_800639.1| A/G-specific DNA glycosylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120941|gb|ABJ78984.1| A/G-specific DNA glycosylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124610|gb|ABJ75881.1| A/G-specific DNA glycosylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 372
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
PK L E+ + K +L + N + + V+ ++ Q+ + + +
Sbjct: 6 NPKLLIELRENLLSWFQKNKRKLPFRINKNAYRIWVSEIMLQQTRVAAMLPIYETFLKRF 65
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ + E+++ Y + +G Y ++ N+ + +L+ +++ + P+ E +PG+G
Sbjct: 66 PDPKALQDASEEEVMKYWKGLGYYS-RARNLKKGAELLVEKYEGRFPEDYEEALSIPGVG 124
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP----NKVEQS-LLRIIPPKHQY 192
A+ +LS+A+G P +D ++ R+ +R+ L N+V + + P
Sbjct: 125 SYTASAVLSIAYGKPYAVLDGNVKRVLSRLFLIESDPNSNSTNQVLADLAQKFLTPGDPG 184
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
N + ++ G VC P C +C N C+
Sbjct: 185 NHNEAMMELGALVCIPV-PNCSACPFENHCEA 215
>gi|45550361|ref|NP_610078.2| CG9272 [Drosophila melanogaster]
gi|45445193|gb|AAF53949.2| CG9272 [Drosophila melanogaster]
Length = 388
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + TP K+ + +L+N + + Y+ K++ +
Sbjct: 197 FQNLVALMLSSQTKDQTTYEAMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYL 256
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
IL +++ + IP ++ L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 257 KQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRL 316
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 317 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPS 375
>gi|297620289|ref|YP_003708426.1| A/G-specific adenine glycosylase MutY [Waddlia chondrophila WSU
86-1044]
gi|297375590|gb|ADI37420.1| A/G-specific adenine glycosylase MutY [Waddlia chondrophila WSU
86-1044]
Length = 374
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 82/202 (40%), Gaps = 10/202 (4%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + + + + V+ ++ Q+ V + E + +
Sbjct: 34 LKRWFLEYQRDLPWRDSRTPYAVWVSEVMLQQTQVAVVIPYFLNWMEQFPDIPSLAKADQ 93
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+++ +G Y ++ N+ + + ++ +F+ +P + L+++ G+G I S A
Sbjct: 94 QEVIKAWEGLGYYS-RARNLHAGAQYVLEQFNGVLPSDPQLLSKIKGLGPYTIGAIRSFA 152
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGR 203
F T VD ++ R+ R + + V L + +P + + + L+ G
Sbjct: 153 FQQKTAAVDGNVLRVIARYRMLNEDISKQKTVKNVNDWLEKQLPDQEHWLINEGLIELGA 212
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
VCK RKP C C + C+
Sbjct: 213 TVCK-RKPDCCLCPLRAGCQSY 233
>gi|310824392|ref|YP_003956750.1| base excision DNA repair protein [Stigmatella aurantiaca DW4/3-1]
gi|309397464|gb|ADO74923.1| Base excision DNA repair protein, HhH-GPD family [Stigmatella
aurantiaca DW4/3-1]
Length = 226
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 88/179 (49%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ F +VA +LS ++ D + L A TP+ M + ++++ I + K
Sbjct: 40 HTTLFEQLVACILSIRTRDEVSLPTSLALLRRAHTPEAMSQLTPEEIEALIAQVTFPEPK 99
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ I +L+ + EF ++P E L G+G K A++ L +A G I VD H+ R++
Sbjct: 100 ARQIHALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACGHEAISVDIHVHRVT 159
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
NR G ++P + ++L +P + + LV G++VC +PQC C + +C+
Sbjct: 160 NRWGYVRTRSPEQTLKALEARLPRAYWIEINRLLVPFGKHVCTGSRPQCSRCPVLAMCQ 218
>gi|170016550|ref|YP_001727469.1| A/G-specific adenine glycosylase [Leuconostoc citreum KM20]
gi|169803407|gb|ACA82025.1| A/G-specific adenine glycosylase [Leuconostoc citreum KM20]
Length = 340
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 19 LYTPKELEEIFYLFSLKWP-SPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
L++ + + + + + + L + + ++V+ ++ Q+ V +
Sbjct: 3 LWSEETIRDFRHTLLTWYDQEGRANLPWRLNHEPYRVLVSEIMLQQTQVDTVLPYYERFM 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T Q + E+++ +G Y ++ N+ + +++E P++ + L LP
Sbjct: 63 QHLPTVQDLARAPEEQVLKLWEGLGYYS-RARNLQKAARFVVDELHGNWPESADDLQELP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPK 189
G+G + I S++F VD + +R+ +R +A K+ ++L I+ P+
Sbjct: 122 GVGPYTSAAIASISFNEVVPAVDGNAYRVFSRLLKIDADIAQTKSRKIFYDAILPIVDPQ 181
Query: 190 HQYNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G A+ P
Sbjct: 182 RPGDFNQAIMDLGSSYMTAKNPD 204
>gi|89897892|ref|YP_515002.1| enodnuclease III [Chlamydophila felis Fe/C-56]
gi|89331264|dbj|BAE80857.1| enodnuclease III [Chlamydophila felis Fe/C-56]
Length = 212
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 2/211 (0%)
Query: 19 LYTPKELE-EIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ I + +P PK L + F L++AVLLS STD VN T LF I
Sbjct: 1 MENKTDVKNFILSTLNDLFPDPKPSLTGWETPFQLLIAVLLSGNSTDKAVNSVTPKLFAI 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
A Q + + KKL + I G+ +KSE + +LS IL+ + + P +L+ LT LPGI
Sbjct: 61 APDAQALAQLPLKKLYSIISPCGLGERKSEYLHNLSKILLERYHGEPPASLDLLTELPGI 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK A+V L + + +PT VDTHI R+S R G++ ++P+ E+ L+ + H
Sbjct: 121 GRKTASVFLGIIYKMPTFPVDTHILRLSQRWGISNKRSPSAAEKDLVLFFGDANSSKLHL 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ + R C A C I ++ ++
Sbjct: 181 QLIYYARKYCPALHHSVNKCKICAYLQKHRK 211
>gi|221058032|ref|XP_002261524.1| endonuclease iii homologue [Plasmodium knowlesi strain H]
gi|194247529|emb|CAQ40929.1| endonuclease iii homologue, putative [Plasmodium knowlesi strain H]
Length = 396
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V+ +LS ++ D + A + L + T ML E++L+ I+T+G Y+ K++ I
Sbjct: 206 FQTLVSCMLSTRTRDESTAMAMERLKKHGLTVHNMLKTSEEELKKLIQTVGFYKIKAKQI 265
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA-FGIPTIGVDTHIFRISNRI 167
I +S IL +++D IP TLEGL LPGIG+K A++IL A I VD H+ RISNR+
Sbjct: 266 IQISQILRDKYDYDIPHTLEGLLELPGIGQKVAHLILQTALDTHEGIAVDIHVHRISNRL 325
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K + + L +P + LV G+ VCKA+ P C C ++N CK +
Sbjct: 326 NWVCTKNESITQSKLESYVPRALWSELNKTLVGFGQVVCKAKSPHCTMCAVTNCCKYYQ 384
>gi|146300490|ref|YP_001195081.1| DNA-(apurinic or apyrimidinic site) lyase [Flavobacterium
johnsoniae UW101]
gi|146154908|gb|ABQ05762.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Flavobacterium johnsoniae UW101]
Length = 216
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ E K+ K L Y N + L+V V+LSAQ +D N+NK LFE T +
Sbjct: 8 ENWETKLKPILKKYKHKKHPLDYQNTYQLLVMVVLSAQDSDANINKIAPALFEKYPTLKS 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ +YI + Y K++ ++ ++H + N DN IP T+ GLT L GIGRK AN
Sbjct: 68 LSKADIDTFISYISKVRNYPTKAQWLLEIAHTIQN--DNDIPLTMSGLTALKGIGRKSAN 125
Query: 143 VILSMAFG-IPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRIIPPKHQYNAHYWLVL 200
VIL I D H+ R++ RIG+ NKVE+ L++ +P +
Sbjct: 126 VILRETEQPAEGIIADLHVIRVAPRIGIIKESKDGNKVEKDLMQALPKSIWSEIGMAISF 185
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
GR +C+ KP+C+ C+++ +C
Sbjct: 186 LGREICRP-KPKCEECLLTEICLYY 209
>gi|221487635|gb|EEE25867.1| helix-hairpin-helix motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 833
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + V+ ++ Q+ V + T ++ E+++ +G YR ++
Sbjct: 263 SPYGVWVSEVMLQQTQVCTVIDYWQRWMSRWPTVGDLVKATEEEVSQMWSGLGYYR-RAR 321
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
++ + ++ EFD ++P +E L +PGIG I ++AFG VD ++ R+ R
Sbjct: 322 QLLKGAQTVVQEFDGELPGDVEKLLSIPGIGPYTGGAISAIAFGNRAAAVDGNVLRVLAR 381
Query: 167 I-GLAPGKTPNKVEQSLLRIIPP----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ GLA + R +PP + + L+ G +C R P C SC +
Sbjct: 382 LLGLAAPADSRALAMFCSRWMPPFLDPRRPGASTEALIELGATICTPRAPSCLSCPVRQF 441
Query: 222 C 222
C
Sbjct: 442 C 442
>gi|269794024|ref|YP_003313479.1| A/G-specific DNA glycosylase [Sanguibacter keddieii DSM 10542]
gi|269096209|gb|ACZ20645.1| A/G-specific DNA glycosylase [Sanguibacter keddieii DSM 10542]
Length = 313
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 11/219 (5%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKA 69
P +P + E+ + + L + + ++V+ ++S Q+ V
Sbjct: 1 MPAPHHQSPATITELQETLADWFERTARPLPWRAPDRTPWGVLVSEVMSQQTPVARVAPV 60
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ +P A + +G R+ + + ++ ++P+
Sbjct: 61 WLEWMDRWPSPAAFAAASTADVLRAWGRLGYPRRALR-LQECAQAVVERHGGEVPEDEAL 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLLRII 186
L LPG+G A +++ AFG ++ VDT++ R+ R P E + +
Sbjct: 120 LLALPGVGAYTAAAVMAFAFGRRSVVVDTNVRRVLARTVGGDALPMPALTAAESARAARL 179
Query: 187 PPKHQYNAHYWL---VLHGRYVCKARKPQCQSCIISNLC 222
P +A W + G VC AR P C C +S+LC
Sbjct: 180 APVADDDAALWAASSMELGAVVCTARAPACDRCPVSHLC 218
>gi|171464196|ref|YP_001798309.1| A/G-specific adenine glycosylase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193734|gb|ACB44695.1| A/G-specific adenine glycosylase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 381
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 82/220 (37%), Gaps = 16/220 (7%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + S + L + + + + V+ ++ Q+ V + +
Sbjct: 1 MSKTLINNFAPKLIAWHGVSGRSSLPWQGNRDPYAVWVSEIMLQQTQVTTVLERYPRFMK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +K+ A ++ +G Y ++ N+ + + ++ EF K P L +L G
Sbjct: 61 RFPTVKKLAAADIDEVLAEWAGLGYYS-RARNLHACAKQVVTEFGGKFPSDPVLLEQLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPK- 189
IGR A I + AF +D ++ RI R+ + G +KV L ++P
Sbjct: 120 IGRSTAGAIAAFAFHERAPILDVNVKRILARLFVIEGAIQDKVVNDQLWGLAADLLPSNS 179
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCKR 224
L+ G C +RKP C + C C+
Sbjct: 180 ADMSVYTQALMDFGATWCTSRKPVCLGSEKKCPFEKDCQA 219
>gi|312871820|ref|ZP_07731908.1| putative endonuclease III [Lactobacillus iners LEAF 3008A-a]
gi|311092762|gb|EFQ51118.1| putative endonuclease III [Lactobacillus iners LEAF 3008A-a]
Length = 208
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDIEACIKNIGLYRTKAKHLKATATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPKSAEPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|293603175|ref|ZP_06685608.1| A/G specific adenine glycosylase [Achromobacter piechaudii ATCC
43553]
gi|292818406|gb|EFF77454.1| A/G specific adenine glycosylase [Achromobacter piechaudii ATCC
43553]
Length = 359
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 83/199 (41%), Gaps = 12/199 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A ++ + Y
Sbjct: 16 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYERFLERFPDVAALAAASQEDVMPYWA 75
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + +++ + P T E + LPGIGR A I + A+G + +
Sbjct: 76 GLGYYA-RARNLHRCAVQIAQDWNGRFPPTAEAIATLPGIGRSTAAAIAAFAYGERSPIL 134
Query: 157 DTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPK-------HQYNAHYWLVLHGRYVCKA 208
D ++ R+ G+A +VE L + + L+ G +C
Sbjct: 135 DGNVKRVFTRHFGIAGDPAKREVETRLWALADAQVDAAPGLDMAAYTQGLMDLGATLCTR 194
Query: 209 RKPQCQSCIISNLCKRIKQ 227
KP C+ C +++ C ++
Sbjct: 195 GKPACERCPMADTCVARRE 213
>gi|311103762|ref|YP_003976615.1| A/G-specific adenine glycosylase [Achromobacter xylosoxidans A8]
gi|310758451|gb|ADP13900.1| A/G-specific adenine glycosylase [Achromobacter xylosoxidans A8]
Length = 356
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + + + A ++ + Y
Sbjct: 16 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYERFLQRFPDVAALGAAAQEDVMPYWA 75
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + ++ + P T E + LPGIGR A I + A+G +
Sbjct: 76 GLGYYA-RARNLHRCAQEIARDWSGRFPPTAEAIATLPGIGRSTAAAIAAFAYGERAPIL 134
Query: 157 DTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPK-------HQYNAHYWLVLHGRYVCKA 208
D ++ R+ G+A T +VEQ L + + L+ G +C
Sbjct: 135 DGNVKRVFTRHFGIAGDPTKREVEQKLWALADAQVEAAPGLDMAAYTQGLMDLGATLCTR 194
Query: 209 RKPQCQSCIISNLCKRIKQ 227
KP C +C ++ C ++
Sbjct: 195 GKPACDACPAADSCVAKRE 213
>gi|237830521|ref|XP_002364558.1| helix-hairpin-helix motif-containing protein [Toxoplasma gondii
ME49]
gi|211962222|gb|EEA97417.1| helix-hairpin-helix motif-containing protein [Toxoplasma gondii
ME49]
gi|221507434|gb|EEE33038.1| helix-hairpin-helix motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 833
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + V+ ++ Q+ V + T ++ E+++ +G YR ++
Sbjct: 263 SPYGVWVSEVMLQQTQVCTVIDYWQRWMSRWPTVGDLVKATEEEVSQMWSGLGYYR-RAR 321
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
++ + ++ EFD ++P +E L +PGIG I ++AFG VD ++ R+ R
Sbjct: 322 QLLKGAQTVVQEFDGELPGDVEKLLSIPGIGPYTGGAISAIAFGNRAAAVDGNVLRVLAR 381
Query: 167 I-GLAPGKTPNKVEQSLLRIIPP----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ GLA + R +PP + + L+ G +C R P C SC +
Sbjct: 382 LLGLAAPADSRALAMFCSRWMPPFLDPRRPGASTEALIELGATICTPRAPSCLSCPVRQF 441
Query: 222 C 222
C
Sbjct: 442 C 442
>gi|116334508|ref|YP_796035.1| A/G-specific DNA glycosylase [Lactobacillus brevis ATCC 367]
gi|116099855|gb|ABJ65004.1| A/G-specific DNA-adenine glycosylase [Lactobacillus brevis ATCC
367]
Length = 379
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 9/216 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ + E + +L + + + + V+ ++ Q+ V + +
Sbjct: 4 WSTATIREFRQTLLAWYDREGRDLPWRHDQDPYHVWVSEIMLQQTQVQTVIPYYLNFMAM 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E++L + +G Y ++ N+ + L++++ K PQT L L GI
Sbjct: 64 FPTVADLAQAPEEQLLKAWQGLGYYS-RARNLQRAARQLVDDYRGKWPQTAAELLDLTGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AFG VD + FR+ +R +A +T EQ + I+ P+
Sbjct: 123 GPYTAGAIASIAFGEVVPAVDGNAFRVFSRLLLIDADIAKPQTRKLFEQVIQPIVDPQRP 182
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ G A+ + ++
Sbjct: 183 GAFNQAIMDLGSSYMTAKNSDPAHSPVRAFDASYRE 218
>gi|330818347|ref|YP_004362052.1| A/G-specific adenine glycosylase MutY [Burkholderia gladioli BSR3]
gi|327370740|gb|AEA62096.1| A/G-specific adenine glycosylase MutY [Burkholderia gladioli BSR3]
Length = 371
Score = 95.4 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + E + A
Sbjct: 24 RLIAWQREHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYQRFLEHFPDVAALAAA 83
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ +G Y ++ N+ + +++ E P++ E L LPGIGR A I S
Sbjct: 84 PADQVMALWAGLGYYT-RARNLHRCAQVVMAEHGGHFPESPEALAELPGIGRSTAAAISS 142
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLL----RIIPPKH----QYNAHYW 197
AFG +D ++ R+ R+ G K VE + R+ P +
Sbjct: 143 FAFGARAPILDGNVKRVLARVFGVEGFPGEKRVENGMWALAERLFPREADDAGISAYTQG 202
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C+ C + C
Sbjct: 203 LMDLGATLCGRGKPDCKRCPFAADC 227
>gi|221211198|ref|ZP_03584177.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD1]
gi|221168559|gb|EEE01027.1| A/G-specific adenine glycosylase [Burkholderia multivorans CGD1]
Length = 370
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFAPRLIAWQRQHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVVPYYTRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGIEGFPGEKRV 174
Query: 179 EQSLLRI----IPP----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAAHADDVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|91781718|ref|YP_556924.1| A/G-specific DNA-adenine glycosylase [Burkholderia xenovorans
LB400]
gi|91685672|gb|ABE28872.1| A/G-specific DNA-adenine glycosylase [Burkholderia xenovorans
LB400]
Length = 375
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 19/234 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLL 57
++ + + S +P + + + + +L + + + + ++ ++
Sbjct: 5 LTPRSTSSGAPAAPAFPVMS-----DFSARLIAWQRQHGRHDLPWQNTRDPYRIWLSEIM 59
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + + A + +G Y ++ N+ + +++
Sbjct: 60 LQQTQVSTVIPYYAKFLARFPSVAALAAAPSDDVMALWAGLGYYT-RARNLHRCAQVVVE 118
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PN 176
+ P ++E L LPGIGR A I S AFG +D ++ R+ R+ G
Sbjct: 119 QHGGGFPTSVEELAELPGIGRSTAAAIASFAFGARATILDGNVKRVLARVFGVEGFPGEK 178
Query: 177 KVEQSLL----RIIP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
KVE ++ ++P L+ G +C KP C C + C
Sbjct: 179 KVENAMWTLAESLLPSNASDAEVSAYTQGLMDLGATLCVRGKPDCLRCPFAVDC 232
>gi|283768761|ref|ZP_06341672.1| putative A/G-specific adenine glycosylase [Bulleidia extructa
W1219]
gi|283104547|gb|EFC05920.1| putative A/G-specific adenine glycosylase [Bulleidia extructa
W1219]
Length = 346
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 79/208 (37%), Gaps = 12/208 (5%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
F + + + + + + ++ ++ Q+ V + + + +
Sbjct: 8 FQQLIQWYQAHHQNYPWRLTKDPYAVWISEIMLQQTRIETVLPKYERFMKELPSIHDLAT 67
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ E L ++ +G Y ++ N+ + + + P LE + L GIG A I
Sbjct: 68 VSEDHLMHFWEGLGYYS-RARNLQKAALQIEDRHHGIFPHQLEEIQALTGIGDYTAGAIA 126
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPK---HQYNAHYW 197
S +FG+ +D ++ R+ +R + V+Q +L + + + +
Sbjct: 127 SFSFGVGVPAIDGNVLRVYSRHEGLYQNVLDPSVKSLVKQQMLPLYTKEKHSDNGDFNQA 186
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C + P CQ+C I C
Sbjct: 187 IMELGEQICLPKNPDCQNCPIQKGCFSF 214
>gi|159487771|ref|XP_001701896.1| DNA repair glycosylase [Chlamydomonas reinhardtii]
gi|158281115|gb|EDP06871.1| DNA repair glycosylase [Chlamydomonas reinhardtii]
Length = 793
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 73/183 (39%), Gaps = 4/183 (2%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + T + A + + + +G YR ++
Sbjct: 120 AYWVWVSEVMLQQTQVATVIPYFRRWVSRWPTVSDLAAADTEAVNSMWAGLGYYR-RARY 178
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
++ + + + P + + L ++PG+G + + S+AFG P VD ++ R+ +R+
Sbjct: 179 LLEGAKFVAGQLGGTFPTSAQELLKIPGVGPYTSAAVASIAFGSPAAAVDGNVIRVLSRL 238
Query: 168 GLAPGKTPNKVEQSLL---RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
PG ++ + L+ G VC+ P C +C +C+
Sbjct: 239 RALPGDPTKLGAAHTAMAGEVLDGGRPGCYNQALMELGATVCRPVNPDCSACPARPVCRA 298
Query: 225 IKQ 227
+
Sbjct: 299 AAE 301
>gi|90408152|ref|ZP_01216321.1| A/G-specific adenine glycosylase [Psychromonas sp. CNPT3]
gi|90310764|gb|EAS38880.1| A/G-specific adenine glycosylase [Psychromonas sp. CNPT3]
Length = 356
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 6/179 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++ ++ Q+ + V K + ++ ++ +G Y ++ N+
Sbjct: 31 YKTWISEIMLQQTQVITVIPYFKKFMRAFPNITYLANAPLDEVLHHWTGLGYYA-RARNL 89
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ + + + P + + L GIGR A ILS+ G +D ++ R+ R
Sbjct: 90 HKTAIDIRDNYQGAFPTEFDNVIALSGIGRSTAGAILSLTLGQNHAILDGNVKRVLTRHQ 149
Query: 169 LAPGKT-PNKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
G T KVE L +++P + + ++ G VC KP+C C +S C
Sbjct: 150 SIEGWTGEKKVENRLWTLAEKLLPRQKADVFNQAMMDMGAMVCTRSKPKCNECPVSVDC 208
>gi|170734142|ref|YP_001766089.1| A/G-specific adenine glycosylase [Burkholderia cenocepacia MC0-3]
gi|169817384|gb|ACA91967.1| A/G-specific adenine glycosylase [Burkholderia cenocepacia MC0-3]
Length = 368
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 80/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLVAWQRAHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVIPYYTRFLDRFPDVAALAAAPSDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGVFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANPADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|107023730|ref|YP_622057.1| A/G-specific adenine glycosylase [Burkholderia cenocepacia AU 1054]
gi|116690817|ref|YP_836440.1| A/G-specific adenine glycosylase [Burkholderia cenocepacia HI2424]
gi|105893919|gb|ABF77084.1| A/G-specific DNA-adenine glycosylase [Burkholderia cenocepacia AU
1054]
gi|116648906|gb|ABK09547.1| A/G-specific DNA-adenine glycosylase [Burkholderia cenocepacia
HI2424]
Length = 368
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 80/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLVAWQRAHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVIPYYTRFLDRFPDVAALAAAPSDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGVFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANPADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|294674659|ref|YP_003575275.1| A/G-specific adenine glycosylase [Prevotella ruminicola 23]
gi|294472103|gb|ADE81492.1| A/G-specific adenine glycosylase [Prevotella ruminicola 23]
Length = 338
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E + + +L + + + + ++ ++ Q+ T + +
Sbjct: 2 EFASVLLEWYRENGRDLPWRQTHDPYAIWLSEIILQQTQVKQGWDYWTRFMHRWPTVEAL 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ E ++ + +G Y + + I+ P TLE + +L G+G A
Sbjct: 62 ASATEDEVLREWQGLGYYSRARNLHFAAKQIVA---MGHFPDTLEDIKKLKGVGDYTAAA 118
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ------Y 192
I S AFGIP VD +++R+ R + + ++P +
Sbjct: 119 IASFAFGIPAAVVDGNVYRVLARHFGIDTPINTTEGKKLFAAMAQELLPTVNCQLSTVNS 178
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G C P C C + C +
Sbjct: 179 EYNQAIMDFGAIQCTPASPNCMFCPLVESCVAFR 212
>gi|86152296|ref|ZP_01070507.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315125027|ref|YP_004067031.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840785|gb|EAQ58036.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315018749|gb|ADT66842.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 339
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + + +++F+ K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKNAALECVDKFEAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGVYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC ++ +C C + + C+
Sbjct: 180 KELLNVNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQ 220
>gi|312872939|ref|ZP_07732999.1| putative endonuclease III [Lactobacillus iners LEAF 2062A-h1]
gi|311091461|gb|EFQ49845.1| putative endonuclease III [Lactobacillus iners LEAF 2062A-h1]
Length = 208
Score = 95.4 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELRWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPDSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++ I+ IG+YR K++++ + + ++ N++ +P+ + L LPG+G K ANV
Sbjct: 71 AAANISDVEACIKNIGLYRTKAKHLKTTATLIENKYQGIVPKNKKALLTLPGVGIKTANV 130
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+L+ AFG+P+I VDTH+ RI+ + + P P+++E L I+P K H+ ++ G
Sbjct: 131 VLAEAFGVPSIAVDTHVMRIAKQFKIVPKSADPSQIETILENIMPQKDWIKLHHAMIAFG 190
Query: 203 RY 204
RY
Sbjct: 191 RY 192
>gi|260655074|ref|ZP_05860562.1| base excision DNA repair protein, HhH-GPD family [Jonquetella
anthropi E3_33 E1]
gi|260630185|gb|EEX48379.1| base excision DNA repair protein, HhH-GPD family [Jonquetella
anthropi E3_33 E1]
Length = 234
Score = 95.0 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 19/230 (8%)
Query: 14 SPLGCLYTPKELEE-------IFYLFSLKWPSPKGE--LYYVNHFTLIVAVLLSAQSTDV 64
S + +PKEL+ + L +W + ++ ++LS + D
Sbjct: 2 SRMTVSQSPKELKRPVPPVTAVLDLLEAQWGQESNPDVTSFDEPLDGLILIVLSQNTNDR 61
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK-- 122
N + A L T A+ + +L + IR G+ KS II + +
Sbjct: 62 NRDMAFDRLKAACPTWADAAALSQAELISLIRPAGLCDSKSATIIRVLGAAKDLTGQYSL 121
Query: 123 -------IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-T 174
+ +T + G+G K A ++ G P VDTH+ R R+G AP K +
Sbjct: 122 GLLRKKKPAEAWNFMTSIKGVGVKTAACVMVFDLGFPAFPVDTHVARFCRRMGWAPEKAS 181
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P +++ + ++P + AH ++ HGR VCKAR P C C++ LC
Sbjct: 182 PAAIQEMMEGLVPDSRKAGAHLNIITHGRRVCKARGPLCGDCLLRGLCPA 231
>gi|224436986|ref|ZP_03657967.1| A/G-specific adenine glycosylase [Helicobacter cinaedi CCUG 18818]
gi|313143460|ref|ZP_07805653.1| A/G-specific adenine glycosylase [Helicobacter cinaedi CCUG 18818]
gi|313128491|gb|EFR46108.1| A/G-specific adenine glycosylase [Helicobacter cinaedi CCUG 18818]
Length = 347
Score = 95.0 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 9/199 (4%)
Query: 32 FSLKWP-SPKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEIADTPQKM 83
+ + L + + + V+ ++ Q+ V + T + +
Sbjct: 20 LLEWYAIQGRTSLPWRTLKGENAPYGVYVSEIMLQQTQVKRVQEHYFTPFLNAFPTLESL 79
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G Y ++ N+ + + +++ +P T + L +LPGIG +
Sbjct: 80 AKASLDSILKQWEGLGYYT-RARNMQKAAILCCEKYNATLPNTRKDLLKLPGIGAYTSGA 138
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
IL F VD +I R+ RI ++ ++ KH ++ + L+ G
Sbjct: 139 ILCFGFHQSVSFVDGNIRRVLCRIFALREPNQKLLDGLAFLLLDTKHSFDYNQALLDLGA 198
Query: 204 YVCKARKPQCQSCIISNLC 222
+C + P C C + NLC
Sbjct: 199 MICTPKSPNCLICPMQNLC 217
>gi|87123232|ref|ZP_01079083.1| probable adenine glycosylase [Synechococcus sp. RS9917]
gi|86168952|gb|EAQ70208.1| probable adenine glycosylase [Synechococcus sp. RS9917]
Length = 391
Score = 95.0 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 13/202 (6%)
Query: 37 PSPKGELYYV--NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNY 94
P + L + + ++VA ++ Q+ V + + + + A E+ +
Sbjct: 33 PEGRWPLPGQAIDPYGVLVAEVMLQQTQLQVVLPYWRRWMAAFPSLEALAAAEEQAVLLQ 92
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG------LTRLPGIGRKGANVILSMA 148
+ +G Y + + + I LPG+GR A ILS A
Sbjct: 93 WQGLGYYSRGRRLLAAARSIREQWRCGADRSCEAWPRELELWLALPGVGRSTAGGILSSA 152
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK---VEQSLLRIIP--PKHQYNAHYWLVLHGR 203
F +D ++ R+ R+ P + Q ++ P + + L+ G
Sbjct: 153 FNSALPILDGNVRRVLARLQAHPRPPMRQQALFWQWSEALVAAAPGRGRDCNQALMDLGA 212
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
+C R+P C C C
Sbjct: 213 TLCTPRQPSCGVCPWRASCAAY 234
>gi|257386516|ref|YP_003176289.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
gi|257168823|gb|ACV46582.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
Length = 262
Score = 95.0 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 83/217 (38%), Gaps = 12/217 (5%)
Query: 22 PKELEEIFYL------FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++E + + + + +A +L ++ V K +
Sbjct: 39 EERIQEFIETVPELLSWLEANGRVYLWRETTDPWKVYLAEILLQRTRGNAVEKIYDDVLR 98
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
P+ ++ E ++++ +R++G ++ + + I +F ++P +L+ L R
Sbjct: 99 QFPDPETLVEATEGEIEDVVRSLGFVNHRTRTLTEVGEIFTEDFGGEVPGSLDKLKRPWR 158
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRI----GLAPGKTPNKVEQSLLRIIP--PK 189
+G A A P VD++ R+ R+ + + V + + P P
Sbjct: 159 VGDYSARATQLFAREQPMALVDSNFARVIGRVLGYEMPSQPHKSDDVYALMEALTPDDPD 218
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G VC + P C SC +++ C +
Sbjct: 219 LARSFNLAILDLGALVCTSEDPDCPSCPLNSACSYYE 255
>gi|34499158|ref|NP_903373.1| A/G-specific DNA glycosylase [Chromobacterium violaceum ATCC 12472]
gi|34105009|gb|AAQ61365.1| A/G-specific DNA glycosylase [Chromobacterium violaceum ATCC 12472]
Length = 347
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 8/202 (3%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ + + + ++ ++ Q+ +V + A +
Sbjct: 13 QRRHGRHDLPWQVKDPYRVWLSEIMLQQTQVKSVLDYYPRFLARFPDVASLAAAPVDDVL 72
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+G Y ++ N+ + ++++ F P E L +LPG+GR A I + AFG
Sbjct: 73 AQWSGLGYYS-RARNLHKAAKMVMDAFGGAFPPERERLEQLPGVGRSTAAAISAFAFGRR 131
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK--HQYNAHYWLVLHGRYV 205
+D ++ R+ R G +K +E+ + + +P L+ G V
Sbjct: 132 ETILDGNVKRVLARCFGIDGFPGDKAIEKRMWALAEEILPAAAADIGPYVQGLMDLGATV 191
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C KP C +C + + C ++
Sbjct: 192 CSRGKPACTACPMVDGCVAARE 213
>gi|296134840|ref|YP_003642082.1| A/G-specific adenine glycosylase [Thiomonas intermedia K12]
gi|295794962|gb|ADG29752.1| A/G-specific adenine glycosylase [Thiomonas intermedia K12]
Length = 388
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 7/200 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + + + + ++ ++ Q+ V + T Q + E
Sbjct: 41 RWQRQHGRHDLPWQVRDPYRVWLSEIMLQQTQVATVIDYYARFTALFPTVQALAEAPEDA 100
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G Y++ N+ + I++ PQT E L LPGIG A I F
Sbjct: 101 VLAAWSGLGYYQRAC-NLHRCAQIVVETHGGAFPQTAESLATLPGIGPSTAAAIAVFCFD 159
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPK-HQYNAHYWLVLHGRY 204
+D ++ R+ R P K+ ++P L+ G
Sbjct: 160 ERAAILDGNVQRVLCRSHGIDDPVPTTATTRKLWSLARSLLPEAQDMAAYTQGLMDLGAT 219
Query: 205 VCKARKPQCQSCIISNLCKR 224
+CK R+P C C + C+
Sbjct: 220 LCKPRQPACTECPFATDCRA 239
>gi|224418028|ref|ZP_03656034.1| A/G-specific adenine glycosylase [Helicobacter canadensis MIT
98-5491]
gi|253827360|ref|ZP_04870245.1| A/G-specific adenine glycosylase [Helicobacter canadensis MIT
98-5491]
gi|313141567|ref|ZP_07803760.1| A/G-specific adenine glycosylase [Helicobacter canadensis MIT
98-5491]
gi|253510766|gb|EES89425.1| A/G-specific adenine glycosylase [Helicobacter canadensis MIT
98-5491]
gi|313130598|gb|EFR48215.1| A/G-specific adenine glycosylase [Helicobacter canadensis MIT
98-5491]
Length = 332
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 8/200 (4%)
Query: 31 LFSLKWPSPKGELYYVN------HFTLIVAVLLSAQSTDVNV-NKATKHLFEIADTPQKM 83
+ + L + + + ++V+ ++ Q+ + + E T + +
Sbjct: 10 ILLWYEKKGRKSLPWRDKTSKNRAYRVLVSEIMLQQTQVKTILERFYFPFLEKFPTLETL 69
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E+++ R +G Y ++ N++ + I +P+ +E L +LPGIGR A
Sbjct: 70 SKAKEEEVLLQWRGLGYYT-RARNLLKCAKICCESHKGILPKDIESLQKLPGIGRYTAGA 128
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
I + VD++I RI R +P +E I+ + +N + L+ G
Sbjct: 129 IACFGYDRAVSFVDSNIKRILTRFFALQSPSPKLLESKAKTILNTQEPFNHNQALLDIGA 188
Query: 204 YVCKARKPQCQSCIISNLCK 223
+C + P+C C + C+
Sbjct: 189 TLCTPKNPKCTQCPLQPFCQ 208
>gi|182437919|ref|YP_001825638.1| putative adenine glycosylase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778555|ref|ZP_08237820.1| HhH-GPD family protein [Streptomyces cf. griseus XylebKG-1]
gi|178466435|dbj|BAG20955.1| putative adenine glycosylase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658888|gb|EGE43734.1| HhH-GPD family protein [Streptomyces cf. griseus XylebKG-1]
Length = 301
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + ++++V+ + Q+ V + P + A +
Sbjct: 22 WFEQHARDLPWRRPEAGAWSVMVSEFMLQQTPVSRVLPVYEQWIARWPRPADLAAEAPGE 81
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P L LPGIG A + S A+G
Sbjct: 82 AVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSEHAQLLALPGIGEYTAAAVASFAYG 140
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP--PKHQYNAHYWLVLHGRY 204
+DT++ R+ R PN + ++P + + G
Sbjct: 141 QRHAVLDTNVRRVFARAASGVQYPPNATTAAERKLARALLPEEDERAAKWAAATMELGAL 200
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR C C I++ C
Sbjct: 201 VCTARNEDCDRCPIASRC 218
>gi|195437932|ref|XP_002066893.1| GK24310 [Drosophila willistoni]
gi|194162978|gb|EDW77879.1| GK24310 [Drosophila willistoni]
Length = 351
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A K L +P + + +L+ + + Y+ K++ +
Sbjct: 162 FQNLVALMLSSQTKDETTFEAMKRLKARNLSPGNIKDMPTSELEGLLHPVSFYKNKAKYL 221
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S +L++++ IP ++ L LPG+G K A++ +S+A+ T VD H+ RISNR+
Sbjct: 222 KQTSEVLLDKYGGDIPDNVKDLIGLPGVGPKMAHICMSVAWHKITGIGVDVHVHRISNRL 281
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR- 224
G P K P + L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 282 GWLKTPTKEPEQTRLGLEKWLPKSLWSEVNHLFVGFGQTICTPVKPNCAQCLNRDVCPSA 341
Query: 225 IK 226
K
Sbjct: 342 YK 343
>gi|20664167|pdb|1KQJ|A Chain A, Crystal Structure Of A Mutant Of Muty Catalytic Domain
Length = 225
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + K P+T E + LPG+GR A ILS++ G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLA 146
Query: 166 RIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R G +VE L + P + ++ G +C KP+ C + N
Sbjct: 147 RCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKHSLCPLQN 206
Query: 221 LC 222
C
Sbjct: 207 GC 208
>gi|329113635|ref|ZP_08242413.1| Putative A/G-specific adenine glycosylase YfhQ [Acetobacter pomorum
DM001]
gi|326697042|gb|EGE48705.1| Putative A/G-specific adenine glycosylase YfhQ [Acetobacter pomorum
DM001]
Length = 378
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 75/210 (35%), Gaps = 17/210 (8%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V E T Q +
Sbjct: 30 LLHWYDRHRRTLPWRVVGQSHPDPYRVWLSEIMLQQTTVKAVAPYYLRFTEKFPTVQALA 89
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + + +G Y + + + PQ ++GL LPGIG A +
Sbjct: 90 SADREDVLAAWAGLGYYSRARNLH---ACAQAVVALDGFPQDVQGLRALPGIGPYTAAAV 146
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-------PPKHQYNAHYW 197
++AFG+P + VD ++ R++ R+ P ++ I + +
Sbjct: 147 AAIAFGVPVVPVDGNVERVTARLFAITAPLPPARKKLAQLAITLNADREAQERPSDFAQA 206
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L G +C R P C C C KQ
Sbjct: 207 LFDLGSSLCSPRAPACGLCPWLGECAAYKQ 236
>gi|326386687|ref|ZP_08208308.1| A/G-specific DNA-adenine glycosylase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208740|gb|EGD59536.1| A/G-specific DNA-adenine glycosylase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 356
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 14/208 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNH--------FTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
I + + L + + + ++ ++ Q+T V + T
Sbjct: 15 IAPALLAWYDAHARSLPWRAPPGAPPPDPYRVWLSEVMLQQTTVAAVGPYFERFTRRWPT 74
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A E ++ +G Y + + + P T L +LPG+G
Sbjct: 75 IADLAAADEAEIMAAWAGLGYYSRARNLV---ACAREVVRLGGFPSTEADLRKLPGLGAY 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHY 196
A + ++AFG + VD ++ R+ R+ P + ++ I PP +
Sbjct: 132 TAAAVAAIAFGEAAVVVDANVERVVARLFAITDPLPGARPAIREATATITPPVRAGDFAQ 191
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G VC R P+C C + C+
Sbjct: 192 AMMDLGATVCTVRSPRCLLCPLRGACRA 219
>gi|319760384|ref|YP_004124322.1| A/G-specific adenine glycosylase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039098|gb|ADV33648.1| A/G-specific adenine glycosylase [Candidatus Blochmannia vafer str.
BVAF]
Length = 362
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + + L + + + ++ ++ Q+ + V + T K+
Sbjct: 14 RILLWHYNTKISYLPWQLNKTIYKIWISEIMLQQTQVITVIPYFEKFINTFPTISKLAKA 73
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y++ N+ + I++++++ + PQ + LPGIG+ A ILS
Sbjct: 74 DSNSILYIWSGLGYYKRAI-NVHKTAQIIMSQYNGEFPQNFSTILSLPGIGKSTAGAILS 132
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--------PPKHQYNAHYWL 198
+A +D +I RI R + + + + + +
Sbjct: 133 LALNKRYPILDGNIKRILMRYYALEYHKNISQSKKDANLWHLISMLMPFNEDVSHFNQAM 192
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ GR +C + P+C C +++ C+
Sbjct: 193 MNLGRLICTYKNPKCSICPLNDNCQSF 219
>gi|297748236|gb|ADI50782.1| A/G-specific adenine DNA glycosylase [Chlamydia trachomatis D-EC]
gi|297749116|gb|ADI51794.1| A/G-specific adenine DNA glycosylase [Chlamydia trachomatis D-LC]
Length = 379
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 10/207 (4%)
Query: 29 FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ K + + + + V+ ++ Q+ V E T Q +
Sbjct: 25 LEALRSWFLESKRSFPWRDSPTPYRVWVSEVMLQQTRAEVVVPYFLKWMERFPTLQDLAQ 84
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
E + +G Y ++ N+++ + ++ F +IP L L+ + GIG AN IL
Sbjct: 85 ARESDVVQLWEGLGYYS-RARNLLAGARVITEIFGGEIPNDLALLSSIKGIGSYTANAIL 143
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+ AF VD ++ R+ +R+ T ++ ++P + +
Sbjct: 144 AFAFKQKNPAVDGNVLRVMSRLFAIEESIDRMNTRREITGLCESLLPDQDPQVIAESFIE 203
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +CK ++P C+ C + + C +Q
Sbjct: 204 LGARICK-KQPLCEQCPLRSFCTAYRQ 229
>gi|119714731|ref|YP_921696.1| HhH-GPD family protein [Nocardioides sp. JS614]
gi|119535392|gb|ABL80009.1| HhH-GPD family protein [Nocardioides sp. JS614]
Length = 288
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 11/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E+ + +L + ++++V+ + Q+ V + P
Sbjct: 1 MNELHAPVLQWYDEHARDLPWRRAEAGPWSVLVSEFMLQQTPVARVLPVHEQWLARWPQP 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G R+ + + + ++ D +P + + L LPG+G
Sbjct: 61 ADLAAESAGEAVRAWGRLGYPRRALR-LHAAATAILERHDGAVPSSYDDLIALPGVGDYT 119
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYN--A 194
A I A+G + +DT++ R+ R V ++ + +P
Sbjct: 120 AAAIAVFAYGRRHVVLDTNVRRVLTRTLQGVEFPAPSVTRAERELALAVLPADEPTAATW 179
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC A P+C C ++ LC
Sbjct: 180 SVAVMELGALVCTAANPRCADCPVARLC 207
>gi|282892417|ref|ZP_06300767.1| hypothetical protein pah_c253o042 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497819|gb|EFB40180.1| hypothetical protein pah_c253o042 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 348
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ K +L + N + + V+ ++ Q+ V + T +
Sbjct: 11 LHRWFLEHKRDLPWRNTSDPYAIWVSEVMLQQTQVAVVIPYFERWMTQFPTIATLAEAPL 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y ++ ++ + ++ ++ ++P E L ++ G+G ILS A
Sbjct: 71 DHVIKAWEGLGYYS-RARHLHEAAQFVLLHWEGQLPDREEDLKKIKGLGPYTIGAILSFA 129
Query: 149 FGIPTIGVDTHIFR-----ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F VD ++ R + ++ KT + Q L I+P + + L+ G
Sbjct: 130 FHQKRAAVDGNVMRVLTRYFNMTDDISKPKTVQMLRQMALSILPEDAHWITNEALIELGA 189
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+CK +K +CQ+C +S+ C +
Sbjct: 190 TICK-KKAECQACPLSSSCLAYR 211
>gi|254669973|emb|CBA04643.1| endonuclease III [Neisseria meningitidis alpha153]
Length = 146
Score = 95.0 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/136 (50%), Positives = 98/136 (72%)
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ Y +TIG+Y+ KS++I+ IL+ ++ ++P+ E L LPG+GRK ANV+L+ A
Sbjct: 7 DGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKGEVPEDREALESLPGVGRKTANVVLNTA 66
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
FG P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY CKA
Sbjct: 67 FGHPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYTCKA 126
Query: 209 RKPQCQSCIISNLCKR 224
KPQCQ+CII++LC+
Sbjct: 127 LKPQCQTCIINDLCEY 142
>gi|260767474|ref|ZP_05876411.1| A/G-specific adenine glycosylase [Vibrio furnissii CIP 102972]
gi|260617586|gb|EEX42768.1| A/G-specific adenine glycosylase [Vibrio furnissii CIP 102972]
Length = 341
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
TPK+ +E + + + ++V+ ++ Q+ V V +
Sbjct: 6 LTPKQFQEHLLTWQRHHGRHDLPWQQNPSPYRVLVSEVMLQQTQVVTVIPYFERWMASFP 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + E + N+ + +G Y ++ N+ + + + ++ + P + L +PG+GR
Sbjct: 66 TIEALANATEDAVMNHWQGLGYYS-RARNLRKAALYIQDTWNGEFPADVNALQNIPGVGR 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-----TPNKVEQSLLRIIPPKHQYN 193
A I + AF VD ++ R+ R G ++ + P +
Sbjct: 125 YTAGAIAAFAFNTYGPIVDGNVKRLFCRYFGIEGVPGTSAMDKQLWSTAEAYTPTHNNRQ 184
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G +CK + P C +C + CK +
Sbjct: 185 YAQGLLDMGATLCKPKNPTCDACSFTTTCKAYQ 217
>gi|289642344|ref|ZP_06474492.1| HhH-GPD family protein [Frankia symbiont of Datisca glomerata]
gi|289507876|gb|EFD28827.1| HhH-GPD family protein [Frankia symbiont of Datisca glomerata]
Length = 357
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 11/203 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + ++V+ ++ Q+ V A + + P + A
Sbjct: 65 EWYATHARDLPWRHPEASPWAVLVSEIMLQQTPVNRVLPAWQAWLDRWPAPSALAAEPAG 124
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + I L RLPG+G A + + AF
Sbjct: 125 EAVRMWGRLGYPRRALRLHQAAVAITEEHHGLVPDDLEH-LLRLPGVGTYTARAVAAFAF 183
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW------LVLHGR 203
+D ++ R+ R V + L ++ ++A + G
Sbjct: 184 RQRHAVIDVNVRRLVGRAVNGRDDQRTAVSRRDLELVESLLPHDAESAAQASAAFMELGA 243
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
+C AR P+C++C + C +
Sbjct: 244 LLCVARTPRCEACPLRRECAWRR 266
>gi|291166987|gb|EFE29033.1| A/G-specific adenine glycosylase [Filifactor alocis ATCC 35896]
Length = 360
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + ++ ++ Q+ V + E + + + L +G Y +++
Sbjct: 8 TPYHVWISEIMLQQTRVEAVREYYARFIETLPDIYSLSQVEDDVLHKLWEGLGYYN-RAK 66
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + EF ++P L LPGIG A I S+AF P VD ++ R+ R
Sbjct: 67 NLKKAAQQITTEFGGELPNNYNKLITLPGIGPYTAGAIASIAFHEPVPAVDGNVMRVIAR 126
Query: 167 IG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISN 220
I + KT ++ + + ++IP ++ + L+ G +C P+C C +S
Sbjct: 127 IMGDDSDITENKTKQEMMELVQQLIPVTEVHHFNQALMELGAIICLPNGEPKCLECPMST 186
Query: 221 LCKRI 225
+C
Sbjct: 187 MCIAY 191
>gi|330444403|ref|YP_004377389.1| adenine glycosylase [Chlamydophila pecorum E58]
gi|328807513|gb|AEB41686.1| adenine glycosylase [Chlamydophila pecorum E58]
Length = 365
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 10/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + K + + + ++ ++ Q+ V + + T Q +
Sbjct: 16 EVLKKWFIENKRSFPWRENPTPYGVWISEVMLQQTRAEVVVQYYIRWMKKFPTIQALAEA 75
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ +G Y ++ ++ + I++ F +IP L+++ GIG IL+
Sbjct: 76 REEEVIKAWEGLGYYT-RARFLLEGAKIIVKNFHGEIPDDSFSLSQIRGIGPYTTQAILA 134
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLH 201
AF T +D ++ R+ +R+ + + + + I+P K L+
Sbjct: 135 FAFKQRTAAIDGNVLRVLSRMFVIENSIDLESTKVWISRIAQAILPTKDPQIIAEALIEL 194
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G VCK R PQCQ C + C ++
Sbjct: 195 GACVCK-RSPQCQVCPVREFCGAFEE 219
>gi|213965133|ref|ZP_03393331.1| base excision DNA repair protein, HhH-GPD family [Corynebacterium
amycolatum SK46]
gi|213952247|gb|EEB63631.1| base excision DNA repair protein, HhH-GPD family [Corynebacterium
amycolatum SK46]
Length = 303
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 13/203 (6%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + L + + + ++V+ ++S Q+ V + + E TP +
Sbjct: 17 AALRDWYRANMRPLPWREEGTSPWAVLVSEVMSQQTPVARVIPSWRAWLEKWPTPADLAV 76
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ +G R+ + + ++ + D ++P ++ L LPG+G A +
Sbjct: 77 APKDEVLRMWGKLGYPRRALR-LRECAERIVEKHDGEVPSDVDTLLALPGVGDYTARAVA 135
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN------AHYWLV 199
+ AF T VD ++ R+ R P +++ + ++ + L+
Sbjct: 136 AFAFCARTPVVDINVRRVLRRHR-QGTYLPGTAKRADMALVEEFLPLDPTTAAETSVALM 194
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
G VC+ P+C+ C I+ C
Sbjct: 195 ELGATVCR-TTPECEVCPIATSC 216
>gi|57238632|ref|YP_179763.1| A/G-specific adenine glycosylase [Campylobacter jejuni RM1221]
gi|121613658|ref|YP_001001263.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167006156|ref|ZP_02271914.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|57167436|gb|AAW36215.1| A/G-specific adenine glycosylase [Campylobacter jejuni RM1221]
gi|87249885|gb|EAQ72844.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|315059071|gb|ADT73400.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni S3]
Length = 339
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F+ K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFEAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC ++ +C C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQ 220
>gi|206559201|ref|YP_002229962.1| putative A/G-specific adenine glycosylase [Burkholderia cenocepacia
J2315]
gi|198035239|emb|CAR51113.1| putative A/G-specific adenine glycosylase [Burkholderia cenocepacia
J2315]
Length = 368
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 81/235 (34%), Gaps = 22/235 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVL 56
M + + + +PL + + +L + + + + ++ +
Sbjct: 1 MKPPRIAPAPFPATPLH--------RTFATRLVAWQRAHGRHDLPWQNTRDPYRIWLSEI 52
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + A + +G Y ++ N+ + +++
Sbjct: 53 MLQQTQVSTVIPYYTRFLDRYPDVAALAAAPSDDVMALWAGLGYYS-RARNLHRCAQVVV 111
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
E P T + L LPGIGR A I S A+G +D ++ R+ R+ G
Sbjct: 112 AEHGGAFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGE 171
Query: 177 K-VEQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K VE + + +P L+ G +C KP C C + C
Sbjct: 172 KRVENDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|126652805|ref|XP_001388380.1| endonuclease III [Cryptosporidium parvum Iowa II]
gi|126117473|gb|EAZ51573.1| endonuclease III, putative [Cryptosporidium parvum Iowa II]
Length = 189
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA LS+Q+ D L + +P+ + L++ + +G Y K++N+
Sbjct: 2 FHVLVAAFLSSQTKDEVTAACMNRLIDNGLSPEFINNQSVDSLRDMLYGVGFYNTKAKNL 61
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+S I+I + K+P+ E L LPGIG K AN+IL + FGI I VDTH+ RI NRI
Sbjct: 62 KEISRIIIQNYSGKVPEKYEQLVMLPGIGPKMANLILQIGFGIVVGISVDTHMHRIFNRI 121
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G K P + + + +++P + + + V +G+ +CK P+CQ C I + C +
Sbjct: 122 GWVKTKNPIETSKEMEKMLPRIYWNDINKVFVGYGQTICKPINPKCQECNIRDYCSHGMK 181
>gi|167043781|gb|ABZ08472.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine microorganism HF4000_APKG3D20]
Length = 349
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 69/207 (33%), Gaps = 12/207 (5%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + +V+ + Q+ V + + +
Sbjct: 20 ENLLAWYDDHRRDLPWRKQPSLYKTVVSEFMLQQTRVATVLPYFERWLKQFPDFAALADA 79
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+ + +G Y ++ N+ L+ + PG+G A + S
Sbjct: 80 SEEAVLKAWEGLGYYS-RARNLRKLAQQIEALEKIPADSAA--WEGFPGVGPYVAAAVTS 136
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL------RIIPPKHQYNAHYWLVL 200
++FG VD ++ R+ R+ + + ++ + + ++
Sbjct: 137 ISFGTKAAVVDGNVVRVLARMLSIDEQFRDNATAQRKLRPIAQELLHYNRPGDYNQAVME 196
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC R P C C +C+ ++
Sbjct: 197 LGATVCHRRSPLCSDCPALYVCQSGQR 223
>gi|167519549|ref|XP_001744114.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777200|gb|EDQ90817.1| predicted protein [Monosiga brevicollis MX1]
Length = 221
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 69/219 (31%), Gaps = 24/219 (10%)
Query: 28 IFYLFSLKWPSPKGELYYVNH-------------------FTLIVAVLLSAQSTDVNVNK 68
I + + + L + + + ++ ++ Q+ V
Sbjct: 3 IQHALIQWYHQHQRVLPWRQPSVRRSAESMTHGQDSNTMAYAVWISEVMCQQTQISVVTD 62
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T Q + A + +G Y + + + +I+ +
Sbjct: 63 YFERWIAKWPTVQALAAAQLSDVHQAWAGLGYYSRATRLHEAAQYIVNQLDGSFPTVARL 122
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLL 183
PG+G A+ + S+ F VD ++ R+ +R + L + +
Sbjct: 123 IFCWPPGVGPYTASAVASIVFAKRVGVVDGNVNRVLSRLGGIAVPLTQDAAKKWMWRQAD 182
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + ++ G +C + PQC +C ++ C
Sbjct: 183 TLADHAAPGQINQAMMELGALICTPKSPQCHACPLAEHC 221
>gi|301066533|ref|YP_003788556.1| putative EndoIII-like endonuclease [Lactobacillus casei str. Zhang]
gi|300438940|gb|ADK18706.1| Predicted EndoIII-related endonuclease [Lactobacillus casei str.
Zhang]
gi|327382512|gb|AEA53988.1| Putative endonuclease III [Lactobacillus casei LC2W]
gi|327385709|gb|AEA57183.1| Putative endonuclease III [Lactobacillus casei BD-II]
Length = 229
Score = 95.0 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E +++F +P P+ L+ + F ++VAV+LSAQ+TDV VN T LF TP
Sbjct: 16 TDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVAVNAVTPKLFAAYPTP 75
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
M A + + I +G+YR K+ ++ +LS IL+ E+ K+P L RLPG+G+K
Sbjct: 76 ADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKKT 135
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+LS AF IP + VDTH+ RI +GL P TP +++ L ++PP H L+
Sbjct: 136 ATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQIQARLEALMPPSEWIKLHRSLI 195
Query: 200 LHGRYVCKARKPQ 212
GR +AR PQ
Sbjct: 196 RFGREYLRARDPQ 208
>gi|284165399|ref|YP_003403678.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
gi|284015054|gb|ADB61005.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
Length = 319
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 8/206 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E + + E + + + ++V+ ++S Q+ V +A + E T
Sbjct: 26 ESVREALIAWYEDGHREFPWRRTDDPYEILVSEVMSQQTQLDRVVEAWEGFLERWPTTAA 85
Query: 83 MLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + + + Y +++ + + + NE+D + P + L L G+G A
Sbjct: 86 LADADRADVVGFWTDHSLGYNNRAKYLHEAAGQVENEYDGEFPTAPDELQELMGVGPYTA 145
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
N + S AF VDT++ R+ + E + ++P + ++
Sbjct: 146 NAVASFAFNNGDAVVDTNVKRV-AYRAFSIPDDDAAFEAAASELMPDGESRVWNNAIMEL 204
Query: 202 GRYVCKARKPQCQS--CIISNLCKRI 225
G C + P+C C C
Sbjct: 205 GGVACT-QTPKCDEVGCPWREWCDAY 229
>gi|114778925|ref|ZP_01453719.1| adenine glycosylase [Mariprofundus ferrooxydans PV-1]
gi|114550841|gb|EAU53408.1| adenine glycosylase [Mariprofundus ferrooxydans PV-1]
Length = 307
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 5/193 (2%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + + + ++ ++ Q+ V + T + + A
Sbjct: 2 AWYARHARDLPWRHTTDPYRIWISEIMLQQTQVKTVLPRYLAWLDTFPTIESLAAASADD 61
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L +G YR ++ I + ++ F+ + P+ + + LPGIGR A I S +G
Sbjct: 62 LLKAWEGLGYYR-RARFIHQAAATIMEGFEGRFPRDFDDIVSLPGIGRSTAGAIASFCYG 120
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-HQYNAHYWLVLHGRYVCKAR 209
T +D ++ R+ R P + + + I + ++ G C A+
Sbjct: 121 ASTPVLDGNVKRVLKRWHGQPDASDKALWLLAQQAINISGKPGIWNQAMMELGASACSAK 180
Query: 210 KPQCQSCIISNLC 222
P C +C ++ C
Sbjct: 181 SPDCGACPVNAFC 193
>gi|227535030|ref|ZP_03965079.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187345|gb|EEI67412.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 229
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T E +++F +P P+ L+ + F ++VAV+LSAQ+TDV VN T LF TP
Sbjct: 16 TDAEAKQLFDQIMALYPDPQPTLHAEDPFQILVAVMLSAQTTDVAVNAVTPKLFVAYPTP 75
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
M A + + I +G+YR K+ ++ +LS IL+ E+ K+P L RLPG+G+K
Sbjct: 76 ADMAAAPVEAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKKT 135
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLV 199
A V+LS AF IP + VDTH+ RI +GL P TP +V+ L ++PP H L+
Sbjct: 136 ATVVLSDAFNIPGVAVDTHVSRIVKGLGLVPQNATPVQVQARLEALMPPSEWIKLHRSLI 195
Query: 200 LHGRYVCKARKPQ 212
GR +AR PQ
Sbjct: 196 RFGREYLRARDPQ 208
>gi|261856437|ref|YP_003263720.1| A/G-specific adenine glycosylase [Halothiobacillus neapolitanus c2]
gi|261836906|gb|ACX96673.1| A/G-specific adenine glycosylase [Halothiobacillus neapolitanus c2]
Length = 381
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 68/210 (32%), Gaps = 13/210 (6%)
Query: 25 LEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + +L + + + ++ ++ Q+ V + +
Sbjct: 3 ASDFHSRLLDWFDRHGRHDLPWQHPRTPYRVWISEIMLQQTQVATVIGYFNRFMQRFPSL 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A ++ +G Y + + +P+T G LP +G
Sbjct: 63 DVLAAAPVDEVLALWSGLGYYARARNLHAAA----QIMAQQGVPETRAGWQALPSVGPST 118
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
A I++ AF +P +D ++ R+ R + T + + P +
Sbjct: 119 AAAIMAQAFDVPETILDGNVKRVLARHAGIDRPIEQASTIQALYEVAKLHTPQTRVADYT 178
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G +C P C +C +S C
Sbjct: 179 QAIMDLGATLCTRHSPGCSACPVSADCVAF 208
>gi|88860286|ref|ZP_01134924.1| A/G-specific adenine glycosylase [Pseudoalteromonas tunicata D2]
gi|88817484|gb|EAR27301.1| A/G-specific adenine glycosylase [Pseudoalteromonas tunicata D2]
Length = 356
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T +++ E ++ ++ +G Y ++
Sbjct: 33 KTPYKVWVSEIMLQQTQVATVIPYFERFMARFPTVEELACAPEDEVLHHWTGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++ + + P ++ + LPGIGR A ILS++ +D ++ R+
Sbjct: 92 RNLHKTAKLIVDNYGGQFPTNIDDVIALPGIGRSTAGAILSLSLQQHHPILDGNVKRVLA 151
Query: 166 RIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R + G NK + +I P + + ++ G +C + C C ++
Sbjct: 152 RFFMVEGWYGNKAVENTLWRLSEQITPANNVTQFNQAMMDLGSSLCSRSQFDCDPCPLNT 211
Query: 221 LCKRIK 226
C +
Sbjct: 212 SCGAYQ 217
>gi|86152760|ref|ZP_01070965.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85843645|gb|EAQ60855.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 339
Score = 94.6 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYKKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F+ K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFEAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC ++ +C C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQ 220
>gi|237747309|ref|ZP_04577789.1| A/G-specific adenine glycosylase [Oxalobacter formigenes HOxBLS]
gi|229378660|gb|EEO28751.1| A/G-specific adenine glycosylase [Oxalobacter formigenes HOxBLS]
Length = 373
Score = 94.6 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 7/206 (3%)
Query: 28 IFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
I + K+ + + + ++ ++ Q+ V E + A
Sbjct: 19 ILVAWQKKYGRHSLPWQNTRDAYRIWLSEIMLQQTQVSTVIPYYLRFLEFFPDVYSLAAA 78
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ Y +G Y ++ N+ + I++NE+ P E L +LPGIG+ A I +
Sbjct: 79 SNDEVMKYWSGLGYYS-RARNLHKCARIVVNEYGGIFPSDPESLEKLPGIGKSTAAAIAA 137
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
+ G +D ++ R+ +R+ K + ++P L+
Sbjct: 138 FSAGAKAAILDGNVVRVFSRVFGIRDSITEKAGKNRFWELAYELLPETDIEAYTQGLMDL 197
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C KP C C S+ C + +
Sbjct: 198 GATICVRSKPDCVKCPFSHCCVALSE 223
>gi|195351989|ref|XP_002042498.1| GM23290 [Drosophila sechellia]
gi|194124367|gb|EDW46410.1| GM23290 [Drosophila sechellia]
Length = 378
Score = 94.6 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + TP K+ + +L+N + + Y+ K++ +
Sbjct: 187 FQNLVALMLSSQTKDQTTYEAMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYL 246
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
IL++++ + IP ++ L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 247 KQTVDILMDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRL 306
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ +C
Sbjct: 307 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKEICPS 365
>gi|325969884|ref|YP_004246075.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta sp. Buddy]
gi|324025122|gb|ADY11881.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta sp. Buddy]
Length = 220
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 101/180 (56%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + +++A L+S ++ D A++ LF +A P M+++ E+ +Q I G Y+ K+
Sbjct: 35 NDPYKVLIATLISLRTKDEVTLIASERLFRLAKDPYAMVSLAEEAIQKAIYPAGFYKTKA 94
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+NI +S ILI+ ++ +P T L LPG+G K AN+ L++ + I I VD H+ +I+N
Sbjct: 95 KNIRLISEILISRYNANVPDTQAELLTLPGVGIKTANLTLNLGYQIDAICVDCHVHQIAN 154
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
R+G KTP + EQ+L ++P + + LV +G+ +C P C C C +I
Sbjct: 155 RLGWVETKTPEQTEQALQLVMPRRFWIPLNELLVRYGQLICTPVSPFCSKCPEVERCPKI 214
>gi|257413270|ref|ZP_04742537.2| A/G-specific adenine glycosylase [Roseburia intestinalis L1-82]
gi|257203970|gb|EEV02255.1| A/G-specific adenine glycosylase [Roseburia intestinalis L1-82]
Length = 395
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 81/244 (33%), Gaps = 36/244 (14%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ +L+++ + + L + + + V+ ++ Q+ V +
Sbjct: 1 MLKDYDLKQLVSPLLQWFLNHARVLPWREKPTPYRVWVSEIMLQQTRVEAVKPYFERFTT 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + E +L +G Y + N+ + ++ + ++P E L +L G
Sbjct: 61 ALPDAKALAVCPEDELLKLWEGLGYYN-RVRNMQKAAVEVVENYGGQLPADYEKLLKLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP------ 188
IG A + S+A+GIP VD ++ R+ R+ + + +++
Sbjct: 120 IGHYTAGAVASIAYGIPVPAVDGNVLRVLTRVSADDTDIMKQSFRNEMEKLLEKLMHGAD 179
Query: 189 ------------------------KHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCK 223
+ L+ G +C P C C + C+
Sbjct: 180 GRNEKNVFPWMEDADDLRAKVYHQNLAGAFNQALMELGATICVPNGAPLCTECPWKDFCE 239
Query: 224 RIKQ 227
KQ
Sbjct: 240 AKKQ 243
>gi|164663005|ref|XP_001732624.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
gi|159106527|gb|EDP45410.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
Length = 663
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP---QKMLAIGEKKLQNYIRTIGIYRKKS 105
FT +V+++LS+Q+ D A L + +++ + I + YR+K+
Sbjct: 427 FTTLVSLMLSSQTKDPVTADAVYKLQTRLPDGLTLVSLRDAPPEQITDCIAKVSFYRRKT 486
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + +++ IL + +PQT++ L +PG+G K A + + IGVDTH+ RISN
Sbjct: 487 DYLKTMTRILEEKHHGDVPQTVDELCEIPGVGPKMAFLQMQSMGLNVGIGVDTHVHRISN 546
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--SNLCK 223
R+G KTP + +L +P + +V G+ +C P+C C I + LC
Sbjct: 547 RLGWCKTKTPEQTRLALQSWLPRDLHGVINKQMVGFGQVICLPVSPRCDLCYIGQAKLCP 606
Query: 224 RIKQ 227
++
Sbjct: 607 SYRR 610
>gi|313884919|ref|ZP_07818671.1| A/G-specific adenine glycosylase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619610|gb|EFR31047.1| A/G-specific adenine glycosylase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 379
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 9/197 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++ + L + + +++ V+ ++ Q+ V +
Sbjct: 15 WSQTKIKAFRKALLNWYDQMGRSLPWRENQDPYSIWVSEIMLQQTQVKTVIPYYQRFMTT 74
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ E+++ + + +G Y + N+ + + ++ FD + PQT L L GI
Sbjct: 75 LPNVAALAKASEEQILSLWQGLGYYS-RVRNMQTAAQEIVTNFDGQFPQTKAELLTLKGI 133
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RIIPPKHQ 191
G A I SMAFG +D ++ RI R+ + L ++I P
Sbjct: 134 GDYTAAAIASMAFGQVEPALDGNLIRIVTRLFEIDHDVTKAKTKQELLGILYQLIDPDRP 193
Query: 192 YNAHYWLVLHGRYVCKA 208
+ + ++ G V
Sbjct: 194 GDFNQAMMDLGATVMTP 210
>gi|292610084|ref|XP_001346643.3| PREDICTED: RUN domain containing 3A [Danio rerio]
Length = 430
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L E + +L + ++ L I +G +R K + I
Sbjct: 168 YQVLISLMLSSQTKDQVTAGAMQRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYI 227
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ ++ EF IP T+EGL RLPG+G K A++ + +A+ + VDTH+ RISNR+
Sbjct: 228 KQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRL 287
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G KTP + ++L +P ++ LV G+ VC P C C+ + C
Sbjct: 288 GWTKKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQHTCPS 346
>gi|295698276|ref|YP_003602931.1| A/G-specific adenine glycosylase [Candidatus Riesia pediculicola
USDA]
gi|291157312|gb|ADD79757.1| A/G-specific adenine glycosylase [Candidatus Riesia pediculicola
USDA]
Length = 367
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 83/207 (40%), Gaps = 12/207 (5%)
Query: 26 EEIF-YLFSLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
E+IF + + + L + + + + ++ ++ Q+ V +
Sbjct: 9 EKIFSRRVVQWYLSTKRRSLPWTQNRSIYNVWISEIMLQQTRVSTVIPYYNRFVKRFPNV 68
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q ++ ++ Y +G Y ++ NI + ++ +F P + ++ PGIGR
Sbjct: 69 QSIVDSNMDEILYYWSGLGYYA-RARNIYETARRVVKDFKGVFPLDFQTISSFPGIGRST 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL----RIIPPKHQYNAHY 196
A ILS++ + +D ++ R+ +++E+ L R++P +
Sbjct: 128 AGAILSISENLSFPVLDGNVRRVL-IRFFGLKGIKSQIEKELWSIVDRLVPKVDSRIFNQ 186
Query: 197 WLVLHGRYVCKA-RKPQCQSCIISNLC 222
++ G +C + P CQ C + C
Sbjct: 187 GMMDLGSEICLPLKSPICQDCPLEKDC 213
>gi|199598396|ref|ZP_03211815.1| Predicted EndoIII-related endonuclease [Lactobacillus rhamnosus
HN001]
gi|258508484|ref|YP_003171235.1| endonuclease III [Lactobacillus rhamnosus GG]
gi|199590715|gb|EDY98802.1| Predicted EndoIII-related endonuclease [Lactobacillus rhamnosus
HN001]
gi|257148411|emb|CAR87384.1| Endonuclease III [Lactobacillus rhamnosus GG]
gi|259649794|dbj|BAI41956.1| endonuclease III [Lactobacillus rhamnosus GG]
Length = 216
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E ++F +P P+ L+ N F ++VAV+LSAQ+TDV VN T LF T
Sbjct: 1 MTDSEARQLFEQIMALYPDPQPTLHAQNPFQILVAVMLSAQTTDVAVNAVTPELFAAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A + I +G+YR K+ ++ +LS IL+ ++D ++P L +LPG+G+K
Sbjct: 61 PAAMAAASVTDIAKKISRLGLYRTKAAHLKALSAILVEKYDGQVPANAADLVKLPGVGKK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWL 198
A V+LS AFGIP + VDTH+ RI +GL K TP +++ L ++P H L
Sbjct: 121 TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQSRLETLMPKSTWIKLHRSL 180
Query: 199 VLHGRYVCKARKPQ 212
+ GR +AR PQ
Sbjct: 181 IRFGREHLRARDPQ 194
>gi|330508003|ref|YP_004384431.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosaeta concilii
GP-6]
gi|328928811|gb|AEB68613.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Methanosaeta
concilii GP-6]
Length = 224
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + ++ P +++ L+V +LS ++D+N +A +L +
Sbjct: 8 DKVLACIRILEEEYGVPLQ--DHIDPLDLLVMTILSQNTSDINSLRAFANLKRDYGNYES 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISL---------SHILINEFDNKIPQTLEGLTRL 133
+L +++ + IR G+ K+ I + + + + + L L
Sbjct: 66 LLLAPTEEVADCIREGGLANIKALRIQEVLLSIKRDRGAMDIGFLEGMDKDEAMSYLLDL 125
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQY 192
PG+G K A+++L AFG+P + VDTH+FR+S R+GL P +P K +++L RI+PP+ +
Sbjct: 126 PGVGPKTASIVLLFAFGMPFMPVDTHVFRVSQRLGLVPENLSPEKAQKALERIVPPECYH 185
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ H L+ HGR +C+AR P+ + C + C
Sbjct: 186 SFHLNLIRHGRQICRARGPKHEECALKECC 215
>gi|301065737|ref|YP_003787760.1| A/G-specific DNA glycosylase [Lactobacillus casei str. Zhang]
gi|300438144|gb|ADK17910.1| A/G-specific DNA glycosylase [Lactobacillus casei str. Zhang]
Length = 367
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + +L + + + ++V+ L+ Q+ V +
Sbjct: 8 WPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ + + ++ ++ PQT E L L GI
Sbjct: 68 FPTVGALAKAPEAEVLKAWEGLGYYS-RARRLQQAAKQIVADYGGVWPQTSETLQTLSGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG P +D + FR+ R+ +A +T + ++P
Sbjct: 127 GPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P + +
Sbjct: 187 GDFNQAVMDLGSSYMSANHPDPAHSPVRDF 216
>gi|239629617|ref|ZP_04672648.1| A/G-specific DNA glycosylase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239528303|gb|EEQ67304.1| A/G-specific DNA glycosylase [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 370
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + +L + + + ++V+ L+ Q+ V +
Sbjct: 11 WPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQ 70
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ + + ++ ++ PQT E L L GI
Sbjct: 71 FPTVGALAKAPEAEVLKAWEGLGYYS-RARRLQQAAKQIVADYGGVWPQTSETLQTLSGI 129
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG P +D + FR+ R+ +A +T + ++P
Sbjct: 130 GPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRP 189
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P + +
Sbjct: 190 GDFNQAVMDLGSSYMSANHPDPAHSPVRDF 219
>gi|191637571|ref|YP_001986737.1| A/G-specific adenine glycosylase (Putative) [Lactobacillus casei
BL23]
gi|190711873|emb|CAQ65879.1| A/G-specific adenine glycosylase (Putative) [Lactobacillus casei
BL23]
gi|327381618|gb|AEA53094.1| hypothetical protein LC2W_0760 [Lactobacillus casei LC2W]
gi|327384784|gb|AEA56258.1| hypothetical protein LCBD_0760 [Lactobacillus casei BD-II]
Length = 368
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + +L + + + ++V+ L+ Q+ V +
Sbjct: 9 WPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ + + ++ ++ PQT E L L GI
Sbjct: 69 FPTVGALAKAPEAEVLKAWEGLGYYS-RARRLQQAAKQIVADYGGVWPQTSETLQTLSGI 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG P +D + FR+ R+ +A +T + ++P
Sbjct: 128 GPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P + +
Sbjct: 188 GDFNQAVMDLGSSYMSANHPDPAHSPVRDF 217
>gi|116494237|ref|YP_805971.1| A/G-specific DNA glycosylase [Lactobacillus casei ATCC 334]
gi|116104387|gb|ABJ69529.1| A/G-specific DNA-adenine glycosylase [Lactobacillus casei ATCC 334]
Length = 367
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + +L + + + ++V+ L+ Q+ V +
Sbjct: 8 WPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQ 67
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ + + ++ ++ PQT E L L GI
Sbjct: 68 FPTVGALAKAPEAEVLKAWEGLGYYS-RARRLQQAAKQIVADYGGVWPQTSETLQTLSGI 126
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S++FG P +D + FR+ R+ +A +T + ++P
Sbjct: 127 GPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRP 186
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P + +
Sbjct: 187 GDFNQAVMDLGSSYMSANHPDPAHSPVRDF 216
>gi|195475998|ref|XP_002090269.1| GE13013 [Drosophila yakuba]
gi|194176370|gb|EDW89981.1| GE13013 [Drosophila yakuba]
Length = 387
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L + + TP K+ + +L+N + + Y+ K++ +
Sbjct: 202 FQNLVALMLSSQTKDQTTYEAMNRLKDRSLTPLKVKEMPVTELENLLHPVSFYKNKAKYL 261
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
ILI+++D+ IP ++ L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 262 KLTVEILIDKYDSDIPNNVKELVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNRL 321
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G P K P + +L + +P ++ V G+ +C KP C C+ ++C
Sbjct: 322 GWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCVECLNKDICPS 380
>gi|297619394|ref|YP_003707499.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
gi|297378371|gb|ADI36526.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
Length = 366
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++SA++ D K +K +F+ TP+ ++ I +L+ + G Y+ KS+N
Sbjct: 42 AFKILLSTVISARTKDETTAKVSKKIFDRIKTPEDLINIDITELEEIVHPAGFYKTKSKN 101
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L L +++NK+P T+E L +L G+GRK AN+++S+AF I VDTH+ RI NR
Sbjct: 102 LKKLGTQLKEDYNNKVPNTVEELVKLAGVGRKTANLVVSLAFDNYAICVDTHVHRICNRW 161
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC--IISNLCKRI 225
P + EQ L + +P K+ + + LV++G+ VC P+C C I ++C
Sbjct: 162 NYVSTDFPEETEQELRKKLPKKYWKSINNSLVVYGQDVCSP-TPKCNLCYEEIKSICPHY 220
Query: 226 KQ 227
+
Sbjct: 221 SK 222
>gi|307721950|ref|YP_003893090.1| HhH-GPD family protein [Sulfurimonas autotrophica DSM 16294]
gi|306980043|gb|ADN10078.1| HhH-GPD family protein [Sulfurimonas autotrophica DSM 16294]
Length = 312
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 10/206 (4%)
Query: 23 KELEEIFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVN-KATKHLFEIA 77
K + + + + EL + + + + ++ ++ Q+ V +
Sbjct: 2 KNITLVQKELLTWYNKHGRHELPWRKTDDIYHIYLSEIMLQQTQVNRVRDEYYPQFLAKF 61
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + + +G Y + H +P+T + L LPGIG
Sbjct: 62 PTLASLAETPLDDVLAAWSGLGYYSRA-----RNLHKTAQLSQKSLPKTFKELLALPGIG 116
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
+ A+ I S + VDT+I R+ R V + +++ K N +
Sbjct: 117 QYTASAICSFGYEQNVPVVDTNIARVLKRYFALLHVKDKTVWEYAQKLLNHKEPRNHNLA 176
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G VC + P+C C + C+
Sbjct: 177 LMDLGSMVCLPKNPKCAECPLQANCQ 202
>gi|227540992|ref|ZP_03971041.1| A/G-specific DNA glycosylase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183252|gb|EEI64224.1| A/G-specific DNA glycosylase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 280
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ ++S Q+ V A + + TP + A
Sbjct: 8 LISWYRRCGRDLPWREEGTSAWAVLVSEVMSQQTPVSRVIPAWREWMDKWPTPADLAAAD 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + +P++++ L LPGIG A + +
Sbjct: 68 TADVLRSWGRLGYPRRAL-----WLKQAAEKMEGTVPRSVDKLLELPGIGDYTARAVAAF 122
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG P VD ++ R+ R+ A TP + L RI P+ L+ G VC
Sbjct: 123 AFGAPVPVVDVNVRRVHYRLFDATYLTPPARKGDLARITAPE--PELSVALMELGALVCT 180
Query: 208 ARKPQCQSCIISNLC 222
A PQC+SC +++ C
Sbjct: 181 ATNPQCESCPLADQC 195
>gi|328480169|gb|EGF49114.1| endonuclease III [Lactobacillus rhamnosus MTCC 5462]
Length = 216
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E ++F +P P+ L+ N F ++VAV+LSAQ+TDV VN T LF T
Sbjct: 1 MTDSEARQLFEQIMALYPDPQPTLHAQNPFQILVAVMLSAQTTDVAVNAVTPELFAAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A + I +G+YR K+ ++ +LS IL+ ++D ++P L +LPG+G+K
Sbjct: 61 PAAMAAASVTDIARKISRLGLYRTKAAHLKALSAILVEKYDGQVPANAADLVKLPGVGKK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWL 198
A V+LS AFGIP + VDTH+ RI +GL K TP +++ L ++P H L
Sbjct: 121 TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPIQIQSRLETLMPKSTWIKLHRSL 180
Query: 199 VLHGRYVCKARKPQ 212
+ GR +AR PQ
Sbjct: 181 IRFGREHLRARDPQ 194
>gi|156082960|ref|XP_001608964.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis T2Bo]
gi|154796214|gb|EDO05396.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis]
Length = 205
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A +LS+Q+ D A L + TP+ + + E +L + I +G ++ K+++I
Sbjct: 18 YQTLIACMLSSQTKDAVTAAAMDALKQRGLTPENISKMPEDELDSLISKVGFHKTKAKHI 77
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ +++N+F K+P +E L LPG+G K N++L + F I VD H+ RI+NR+
Sbjct: 78 KQATEMILNKFGGKVPDNIEDLVTLPGVGPKMGNLVLQIGFKRINGIAVDLHVHRIANRL 137
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
KTP + L +IP + ++ LV G+ VC A P C +C + C K
Sbjct: 138 QWVKTKTPEETRIKLQELIPKRLWAEVNHLLVGFGQTVCVAAGPGCGTCGANTWCPVGK 196
>gi|28379696|ref|NP_786588.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum WCFS1]
gi|28272536|emb|CAD65461.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum WCFS1]
Length = 366
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 9/201 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ + +L + + + + V+ ++ Q+ V + +
Sbjct: 4 WDAATIKDFQTTLLDWFDHEGRDLPWRHDHEPYHVWVSEIMLQQTQVQTVIPYYQRFMAL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + A E +L +G Y + N+ + L+ ++D + PQT LT L GI
Sbjct: 64 FPTVADLAAAPESQLLKAWEGLGYYS-RVRNMQRCAKQLLTDYDGQWPQTAAELTELIGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + +R+ +R +A +T E+ + +II +
Sbjct: 123 GPYTAGAIASIAFNEPVPAVDGNAYRVFSRLLKIDADIAKPQTRAAFERVISQIISQERP 182
Query: 192 YNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G AR+P
Sbjct: 183 GDFNQAIMDLGSSYMTARQPD 203
>gi|307728387|ref|YP_003905611.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1003]
gi|307582922|gb|ADN56320.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1003]
Length = 365
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 14/205 (6%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + A
Sbjct: 19 RLIAWQREHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPDVAALAAA 78
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y ++ N+ + ++ + P ++E L LPGIGR A I S
Sbjct: 79 PVDDVMALWAGLGYYT-RARNLHRCAQTVVEQHGGAFPASVEQLAELPGIGRSTAAAIAS 137
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYW 197
AFG +D ++ R+ R+ G KVE ++ ++P
Sbjct: 138 FAFGARATILDGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDDEVSAYTQG 197
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C C + C
Sbjct: 198 LMDLGATLCVRGKPDCARCPFAADC 222
>gi|159904295|ref|YP_001551639.1| A/G-specific DNA glycosylase [Prochlorococcus marinus str. MIT
9211]
gi|159889471|gb|ABX09685.1| A/G-specific DNA glycosylase [Prochlorococcus marinus str. MIT
9211]
Length = 399
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 24/233 (10%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSP---------------KGELYYVNHFTLIVAVLLSAQS 61
G L P++++ + + S E Y+ + ++VA ++ Q+
Sbjct: 13 GVLENPQKIDALRSTLLQWFKSNGRHYIPWKLTKDGTLPNENQYLAVYPILVAEVMLQQT 72
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE--- 118
V + T + E K+ + +G Y + ++ +L
Sbjct: 73 QLKVVLPYWEKWMLALPTLVDLAKAEEDKVLLLWQGLGYYSRARRLHVTSRILLNLIGIP 132
Query: 119 ---FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR---IGLAPG 172
P+ LE LPGIGR A I+S AF +P+ +D ++ R+ R P
Sbjct: 133 NSLNPANWPKDLESWMNLPGIGRNTAGSIISSAFNLPSPLLDGNVKRVLTRLIGSTKTPN 192
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K ++ + ++ + L+ G +C P C +C N C
Sbjct: 193 KDLARLWKLSDLLLDKNLPRTFNQALMDLGATICTKYNPICTNCPWQNYCSAY 245
>gi|229828687|ref|ZP_04454756.1| hypothetical protein GCWU000342_00753 [Shuttleworthia satelles DSM
14600]
gi|229793281|gb|EEP29395.1| hypothetical protein GCWU000342_00753 [Shuttleworthia satelles DSM
14600]
Length = 374
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 10/198 (5%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ K +L + + + + V+ ++ Q+ V + + + A + +
Sbjct: 16 DWFQVNKRDLPWRRDRDPYHIWVSEIMLQQTRVEAVKPYYQGFLAALPSIADLAACPQDQ 75
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L +G Y + N+ + +++ +F ++P + + LPGIG A I S+AF
Sbjct: 76 LNKLWEGLGYYS-RVRNMQKAAEVIMEKFGGQMPSDYDAILSLPGIGPYTAGAISSIAFD 134
Query: 151 IPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+P VD ++ RI R I + + + +L ++P + ++ G
Sbjct: 135 LPAPAVDGNVLRILARVSEDDIDIKSDLAKKRAQAALEGVMPASGSGIFNQAMMEIGATA 194
Query: 206 CKARK-PQCQSCIISNLC 222
C P C C C
Sbjct: 195 CLPNGDPLCGQCPWKKYC 212
>gi|299531519|ref|ZP_07044925.1| A/G-specific adenine glycosylase [Comamonas testosteroni S44]
gi|298720482|gb|EFI61433.1| A/G-specific adenine glycosylase [Comamonas testosteroni S44]
Length = 355
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + A + + +G Y ++
Sbjct: 28 RDPYRVWLSEIMLQQTQVSTVLGYYQRFLDAFPDVASLAAAPQDAVLALWSGLGYYS-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ ++ PQT E L LPGIGR A I S F +D ++ R+
Sbjct: 87 RNLHKCAQTVMEQWGGAFPQTAEELATLPGIGRSTAGAISSFCFSERVPILDANVRRVLT 146
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + ++ + ++ P ++ + ++ G VC +RKP C C
Sbjct: 147 RVLAFDADLAQSRNEKQLWEHAQQLCPTENLHEAMPRYTQGMMDLGASVCTSRKPTCLVC 206
Query: 217 IISNLCKRIK 226
+ + C+ +
Sbjct: 207 PLHSECRAAR 216
>gi|27904974|ref|NP_778100.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|32129767|sp|Q89A45|MUTY_BUCBP RecName: Full=A/G-specific adenine glycosylase
gi|27904372|gb|AAO27205.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 351
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 6/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + ++ ++ Q+ V + + + N +G Y ++
Sbjct: 28 KNPYKTWISEIMLQQTQVKTVIPYYCKFIKRFPNIDTLSDSPLDSILNLWSGLGYYT-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
NI + IL +F+ P + + +LPGIG+ A ILS F + + +D +I R+
Sbjct: 87 RNIYKTAKILKQKFNGIFPNSYAEIIKLPGIGKSTAGAILSFGFNLYSCILDGNIKRVL- 145
Query: 166 RIGLAPGKTPNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ +E+ L + I P H + L+ G +C P+C C + +
Sbjct: 146 IRYYSININNKYIEKLLWKTIESITPIYHTNKFNQALIDIGALICLKSNPKCNICPLKST 205
Query: 222 CKRI 225
CK
Sbjct: 206 CKSY 209
>gi|115374385|ref|ZP_01461668.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
gi|115368587|gb|EAU67539.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
Length = 195
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 88/179 (49%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ F +VA +LS ++ D + L A TP+ M + ++++ I + K
Sbjct: 9 HTTLFEQLVACILSIRTRDEVSLPTSLALLRRAHTPEAMSQLTPEEIEALIAQVTFPEPK 68
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ I +L+ + EF ++P E L G+G K A++ L +A G I VD H+ R++
Sbjct: 69 ARQIHALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACGHEAISVDIHVHRVT 128
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
NR G ++P + ++L +P + + LV G++VC +PQC C + +C+
Sbjct: 129 NRWGYVRTRSPEQTLKALEARLPRAYWIEINRLLVPFGKHVCTGSRPQCSRCPVLAMCQ 187
>gi|312194270|ref|YP_004014331.1| HhH-GPD family protein [Frankia sp. EuI1c]
gi|311225606|gb|ADP78461.1| HhH-GPD family protein [Frankia sp. EuI1c]
Length = 332
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ EL + + ++V+ ++ Q+ V + P + A
Sbjct: 48 EWFGLVARELPWRRPEAGPWAVLVSEVMLQQTPVNRVLPVYEAWLARWPDPAALAAEPSG 107
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + ++ +P L+ L LPGIG A + + AF
Sbjct: 108 EAVRMWGRLGYPRRALRLHQAAT-AIVERHGGAVPDNLDDLLALPGIGTYTARAVTAFAF 166
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW------LVLHGR 203
+D ++ R+ R + P V + L ++ +A + G
Sbjct: 167 RQRQPVIDVNVRRLVARAIEGRAEGPVAVSRKDLALVEDLLPADAETAARASAAFMELGA 226
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C C + C
Sbjct: 227 LVCVARAPRCAGCPVRERC 245
>gi|264676956|ref|YP_003276862.1| A/G-specific adenine glycosylase [Comamonas testosteroni CNB-2]
gi|262207468|gb|ACY31566.1| A/G-specific adenine glycosylase [Comamonas testosteroni CNB-2]
Length = 355
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + A + + +G Y ++
Sbjct: 28 RDPYRVWLSEIMLQQTQVSTVLGYYQRFLDAFPDVASLAAAPQDAVLALWSGLGYYS-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ ++ PQT E L LPGIGR A I S F +D ++ R+
Sbjct: 87 RNLHKCAQTVMEQWGGAFPQTAEELATLPGIGRSTAGAISSFCFSERVPILDANVRRVLT 146
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + ++ + ++ P ++ + ++ G VC +RKP C C
Sbjct: 147 RVLAFDADLAQSRNEKQLWEHAQQLCPTENLHEAMPRYTQGMMDLGASVCTSRKPTCLVC 206
Query: 217 IISNLCKRIK 226
+ + C+ +
Sbjct: 207 PLHSECRAAR 216
>gi|189197913|ref|XP_001935294.1| A/G-specific adenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981242|gb|EDU47868.1| A/G-specific adenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 441
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 17/198 (8%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T Q + A + + + +G Y + +
Sbjct: 26 KRAYEVWVSEVMLQQTRVSTVIPYFNNWIAKWPTVQDLAAANHDDVLSVWKGLGYYSRAT 85
Query: 106 ENIISL-SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ +E IP L PGIGR A + S+AFG +D ++ R+
Sbjct: 86 RLHEGAKKMMSASEDAGTIPSGAAELQEFPGIGRYTAGAVSSIAFGEAEPVLDGNVARVL 145
Query: 165 NRIGLAPGKTPNKVEQS-----------LLRIIPPKH----QYNAHYWLVLHGRYVCKAR 209
+R +K P + L+ G VC R
Sbjct: 146 SRQLGLYVDVKDKKATDILWDMADQLIKYASDFPKTKTSATPGLWNQALMELGSTVCTPR 205
Query: 210 KPQCQSCIISNLCKRIKQ 227
P+C C I C+ +
Sbjct: 206 -PRCNDCPIQATCRAYSE 222
>gi|221068911|ref|ZP_03545016.1| A/G-specific adenine glycosylase [Comamonas testosteroni KF-1]
gi|220713934|gb|EED69302.1| A/G-specific adenine glycosylase [Comamonas testosteroni KF-1]
Length = 355
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 10/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + + + +G Y ++
Sbjct: 28 RDPYRVWLSEIMLQQTQVSTVLGYYQRFLDAFPDVASLAGAPQDAVLALWSGLGYYS-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ ++ PQT E L LPGIGR A I S F +D ++ R+
Sbjct: 87 RNLHKCAQTVMQQWGGAFPQTAEELATLPGIGRSTAGAISSFCFSERVPILDANVRRVLT 146
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + ++ + ++ P ++ + ++ G VC +RKP C C
Sbjct: 147 RVLAFDGDLAQSRNERQLWEYAQQLCPTENLHEAMPRYTQGMMDLGASVCTSRKPTCLVC 206
Query: 217 IISNLCKRIK 226
+ + C+ +
Sbjct: 207 PLDSECRAAR 216
>gi|300934646|ref|ZP_07149902.1| putative A/G-specific DNA glycosylase [Corynebacterium resistens
DSM 45100]
Length = 378
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 87/249 (34%), Gaps = 31/249 (12%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN----HFTLIVAVLLSAQS 61
+ + ++P Y + + + L + + + ++V+ ++S Q+
Sbjct: 28 STPQLESDTPQQHRYPIDR-SQFATDLNRWFARHGRVLPWRDTDTSAWAILVSEVMSQQT 86
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
V + + TP + + ++ +G R+ + + +
Sbjct: 87 PVARVIPLWEAWLKKWPTPADLAVAPKAEVLRMWANLGYPRRALR-LQECARDCVERHGG 145
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+P+T+ L L GIG A + + A+G VDT++ R+ +R +
Sbjct: 146 DVPRTVAELEALSGIGSYTARAVAAFAYGQAVPVVDTNVRRVLHRAVFGNYLQGPARARD 205
Query: 182 ---LLRIIP--PKHQYNA-------HYW-------------LVLHGRYVCKARKPQCQSC 216
+ ++P A H+ L+ G +C+A+ PQC C
Sbjct: 206 LADVAELMPWVDDDPSLARRHFDRSHHQPHAREDARMMTASLMELGALICRAKSPQCDQC 265
Query: 217 IISNLCKRI 225
+ C+ I
Sbjct: 266 PVRQHCQWI 274
>gi|71027073|ref|XP_763180.1| endonuclease III [Theileria parva strain Muguga]
gi|68350133|gb|EAN30897.1| endonuclease III, putative [Theileria parva]
Length = 418
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V +LS+Q+ D K+L + T +L + E++L + I +G ++ K++NI
Sbjct: 233 FQTLVGCMLSSQTKDEITALTMKNLKKRGLTLDNILKMDEEELDSIISKVGFHKTKAKNI 292
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ IL +++ K+P + L LPGIG K AN+IL +AF + VD H+ RI+NR+
Sbjct: 293 KKAAQILKDQYGGKVPSNKKDLESLPGIGPKMANLILQVAFNMVDGVAVDIHVHRITNRL 352
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G KTP + L ++P + LV G+ C A P C +C ++ C
Sbjct: 353 GWVKTKTPEETSLKLQELLPKDLWSKINPLLVGFGQTFCTAAGPGCPTCPVNKWCP 408
>gi|254251384|ref|ZP_04944702.1| A/G-specific DNA glycosylase [Burkholderia dolosa AUO158]
gi|124893993|gb|EAY67873.1| A/G-specific DNA glycosylase [Burkholderia dolosa AUO158]
Length = 481
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 80/231 (34%), Gaps = 19/231 (8%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQ 60
K + P+ L+ + +L + + + + ++ ++ Q
Sbjct: 114 KPPRTAPAPFPVTPLH-----RTFASRLIAWQRIHGRHDLPWQNTRDPYRIWLSEIMLQQ 168
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 169 TQVSTVIPYYTRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQVVVAEHG 227
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VE 179
P T + L LPGIGR A I S A+G +D ++ R+ R+ G +K VE
Sbjct: 228 GAFPSTPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGDKRVE 287
Query: 180 QSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + +P L+ G +C KP C C + C
Sbjct: 288 NDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 338
>gi|298252927|ref|ZP_06976721.1| A/G-specific DNA glycosylase [Gardnerella vaginalis 5-1]
gi|297533291|gb|EFH72175.1| A/G-specific DNA glycosylase [Gardnerella vaginalis 5-1]
Length = 331
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 23/202 (11%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + ++V ++S Q+ V + Q + ++ +G R+
Sbjct: 49 HTTPWGVLVCEVMSQQTQMSRVVPYWLTWMQTWPDAQSLAHATSAEIITAWGRLGYPRRA 108
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ S + ++ + NK+P T E L LPG+G A+ ILS A+G +DT+I R+
Sbjct: 109 LR-LQSCAQVVATRYRNKLPCTYEELIALPGVGDYTASAILSFAYGKHIAVIDTNIRRVL 167
Query: 165 NRIGLAPGKTPNKVEQSLLRI----IPPKH------------------QYNAHYWLVLHG 202
R QS + +P + + ++ G
Sbjct: 168 MRAFTGTESHGGSTTQSDRELAAAVLPEDNHVTAATANATNTTNTTCTSSVWNQAIMEIG 227
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
+C AR PQC +C + C+
Sbjct: 228 ATICTARSPQCTACPLQTWCRF 249
>gi|88811213|ref|ZP_01126469.1| A/G-specific adenine glycosylase MutY [Nitrococcus mobilis Nb-231]
gi|88791752|gb|EAR22863.1| A/G-specific adenine glycosylase MutY [Nitrococcus mobilis Nb-231]
Length = 363
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 9/195 (4%)
Query: 40 KGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + N + + V+ ++ Q+ V + T + +
Sbjct: 31 RRDLPWQNPATSYRVWVSEIMLQQTQVATVVPYFQRFMARFPTLAALAGAELDDVLQLWT 90
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ ++ + + + + P T++ L LPGIGR A ILS+A G +
Sbjct: 91 GLGYYA-RARHLHQAARRIDIDHGGRFPTTIDRLLELPGIGRSTAGAILSLALGQRHPIL 149
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R PG KV+ L + P + + ++ G +C +P
Sbjct: 150 DGNVKRVLARYHAVPGWPGRAKVQHRLWTLAEHHTPRQQNAAYNQGMMDLGASLCIRVRP 209
Query: 212 QCQSCIISNLCKRIK 226
+C+ C ++ C +
Sbjct: 210 RCELCPLAGGCAARR 224
>gi|134296993|ref|YP_001120728.1| A/G-specific DNA-adenine glycosylase [Burkholderia vietnamiensis
G4]
gi|134140150|gb|ABO55893.1| A/G-specific DNA-adenine glycosylase [Burkholderia vietnamiensis
G4]
Length = 368
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 80/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLVAWQRVHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVVPYYTRFLERFPDVAALAAAPSDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T +GL LPGIGR A I S A+G +D ++ R+ R+ G +K V
Sbjct: 115 GGVFPSTPDGLAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGDKRV 174
Query: 179 EQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|311112369|ref|YP_003983591.1| A/G-specific adenine glycosylase [Rothia dentocariosa ATCC 17931]
gi|310943863|gb|ADP40157.1| A/G-specific adenine glycosylase [Rothia dentocariosa ATCC 17931]
Length = 311
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 11/218 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ K E+ + + + +L + + ++V+ + Q+ V +
Sbjct: 1 MFNLKNSHELHHRINTWYQHHARDLPWRRADCTAWGVMVSEFMLQQTPVNRVLPVWEEWM 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
TP + A + +G R+ + + + D ++P + L LP
Sbjct: 61 RRWPTPASLAAEDSAEAVRAWGRLGYPRRAQR-LHGAAVAITKHHDGEVPADYDELLELP 119
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN- 193
G+G A I AFG +DT+I R+ R + + + + N
Sbjct: 120 GVGAYTAAAITVFAFGRRATVIDTNIRRVHARAVMGKALPHKHLNVAETTLAEELMPQNT 179
Query: 194 -----AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ ++ G VC A+ P+C+ C + ++C +K
Sbjct: 180 AVSCVWNASVMELGALVCVAKNPRCEQCPLEDICAWVK 217
>gi|163854802|ref|YP_001629100.1| A/G-specific adenine glycosylase [Bordetella petrii DSM 12804]
gi|163258530|emb|CAP40829.1| A/G-specific adenine glycosylase [Bordetella petrii]
Length = 352
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 12/198 (6%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A ++++ Y
Sbjct: 16 RHDLPWQRTQDPYRIWLSEIMLQQTQVATVIPYYQRFLERFPDVSALAAAQQEEVMPYWA 75
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++E+ + P E + LPGIGR A I + A+G +
Sbjct: 76 GLGYYA-RARNLHRCAQAVMSEWGGRFPAAAEQIATLPGIGRSTAAAIAAFAYGERAPIM 134
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRII-------PPKHQYNAHYWLVLHGRYVCKA 208
D ++ R+ R G +VEQ L + P L+ G +C
Sbjct: 135 DGNVKRVFTRHFGIEGDPARREVEQRLWALAEAQVANAPALDMAAYTQGLMDLGATLCTR 194
Query: 209 RKPQCQSCIISNLCKRIK 226
KP C C ++ C +
Sbjct: 195 GKPACDRCPVAATCIARR 212
>gi|255326111|ref|ZP_05367198.1| A/G-specific adenine DNA glycosylase [Rothia mucilaginosa ATCC
25296]
gi|255296822|gb|EET76152.1| A/G-specific adenine DNA glycosylase [Rothia mucilaginosa ATCC
25296]
Length = 340
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 11/222 (4%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNV 66
+ ++P L +E + + + +L + + ++V+ + Q+ V
Sbjct: 4 EASTPTQHLPEGTNVEALHQRINQWFLDQARDLPWRRDECTPWGVMVSEFMLQQTPVKRV 63
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ TP + A + +G R+ + + ++ + ++P
Sbjct: 64 LPVWEEWMRRWPTPADLAAEPASEAVRAWGRLGYPRRAQR-LHGAAVAIVEQHGGEVPAE 122
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVE-QSL 182
+ L LPG+G A I AFG+ +DT+I R+ R P ++ E +
Sbjct: 123 YDALLALPGVGSYTAAAISVFAFGLRATVIDTNIRRVHARAVSGKALPSRSLTAAETRLA 182
Query: 183 LRIIPPKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++P + + + G VC A+ P CQ C + +LC
Sbjct: 183 EALMPADTPTSCLWNAATMELGALVCTAKSPTCQLCPVEDLC 224
>gi|146329705|ref|YP_001209556.1| A-G-specific adenine glycosylase [Dichelobacter nodosus VCS1703A]
gi|146233175|gb|ABQ14153.1| A-G-specific adenine glycosylase [Dichelobacter nodosus VCS1703A]
Length = 347
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 10/196 (5%)
Query: 40 KGELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+ EL + N + + ++ ++ Q+ V V + + A E+++ R
Sbjct: 18 RHELPWQNCNPYHVWLSEIMLQQTQVVTVIPYFQCFIARFPDIDTLAAAPEEEVLFLWRG 77
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G Y ++ N+ + + ++++ + ++P T L +L G+GR A I AFG D
Sbjct: 78 LGYYA-RARNLHAAAQYVVHQLNGQLPNTRAQLEQLKGVGRSTAAAICVFAFGKKEAICD 136
Query: 158 THIFRI-SNRIGLAPGKTPNKVEQSLL----RIIPP--KHQYNAHYWLVLHGRYVCKARK 210
++ R+ + G+ K +Q L ++P + L+ G +C +
Sbjct: 137 GNVRRVLTRHHGILDFIEAPKTQQQLWTLAEALLPDAADDLRSYTQGLMDLGSLICTRAR 196
Query: 211 PQCQSCIISNLCKRIK 226
P+C C + C +K
Sbjct: 197 PKCADCPVKTDCYALK 212
>gi|227534372|ref|ZP_03964421.1| A/G-specific adenine glycosylase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187989|gb|EEI68056.1| A/G-specific adenine glycosylase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 368
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + +L + + + ++V+ L+ Q+ V +
Sbjct: 9 WPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + E ++ +G Y ++ + + ++ ++ PQT E L L GI
Sbjct: 69 FPTVGALAKAPEAEVLKAWEGLGYYS-RARRLQQAAKQIVADYGGVWPQTSETLQTLSGI 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG P +D + FR+ R+ + Q +I P
Sbjct: 128 GPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQLFFDLIQPLMPKDRP 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P + +
Sbjct: 188 GDFNQAVMDLGSSYMSANHPDPAHSPVRDF 217
>gi|239942186|ref|ZP_04694123.1| putative adenine glycosylase [Streptomyces roseosporus NRRL 15998]
gi|239988652|ref|ZP_04709316.1| putative adenine glycosylase [Streptomyces roseosporus NRRL 11379]
Length = 301
Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + ++V+ + Q+ V + P + A +
Sbjct: 22 WFEQHARDLPWRRPEAGAWGVMVSEFMLQQTPVSRVLPVYEQWLARWPRPADLAAEAPGE 81
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P L LPGIG A + S A+G
Sbjct: 82 AVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSEHAQLLALPGIGEYTAAAVASFAYG 140
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP--PKHQYNAHYWLVLHGRY 204
+DT++ R+ R PN + ++P + + G
Sbjct: 141 QRHAVLDTNVRRVFARAATGVQYPPNATTAAERKLARALLPEEDERAARWAAATMELGAL 200
Query: 205 VCKARKPQCQSCIISNLC 222
VC AR C C I++ C
Sbjct: 201 VCTARNEDCDRCPIASRC 218
>gi|323524677|ref|YP_004226830.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1001]
gi|323381679|gb|ADX53770.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1001]
Length = 383
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 14/205 (6%)
Query: 31 LFSLK-WPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + A
Sbjct: 33 RLIAWQRKHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPDVAALAAA 92
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y ++ N+ + ++ + P ++E L LPGIGR A I S
Sbjct: 93 PVDDVMALWAGLGYYT-RARNLHRCAQAVVEQHGGAFPASVEELAELPGIGRSTAAAIAS 151
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYW 197
AFG +D ++ R+ R+ G KVE ++ ++P
Sbjct: 152 FAFGARATILDGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDDDVSAYTQG 211
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C C + C
Sbjct: 212 LMDLGATLCVRGKPDCLRCPFAADC 236
>gi|269837262|ref|YP_003319490.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerobacter
thermophilus DSM 20745]
gi|269786525|gb|ACZ38668.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerobacter
thermophilus DSM 20745]
Length = 220
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + F +VA +LS ++ D + LF A TP + + L+ IRT+ K
Sbjct: 34 HRSLFEQVVACILSIRTYDEVTLPTARRLFAAAPTPAAVADLPIGDLEELIRTVSFAEPK 93
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ I +++ + E +P E L G+G K A++ L +A G P I VD H+ R++
Sbjct: 94 ARQIHAIARATVEEHGGTLPCDRELLLGFNGVGPKCAHLALGIACGEPWISVDVHVHRVT 153
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
NR G +TP + +L +P ++ + LV G++VC +P C +C + +C+
Sbjct: 154 NRWGYVQTRTPAQTTAALEAHLPERYWVEINRLLVPFGKHVCTGDRPHCSTCPVLPMCR 212
>gi|221482289|gb|EEE20644.1| endonuclease III, putative [Toxoplasma gondii GT1]
Length = 523
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F+++VAV+LS+Q+ D + L + +P+KM + +L + +G Y+ K+
Sbjct: 323 FSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMSRLSVAELSELLYGVGFYQNKARF 382
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
+ IL+ ++ IP T E L +L G+G K AN+ + + I VD H+ RI+NR
Sbjct: 383 LKEACQILLEKYGGDIPPTYEELVQLKGVGPKMANIAVHAGWNRVEGIAVDVHVHRITNR 442
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ KTP + + +L + + + V G+ +C+ P C +C S C +
Sbjct: 443 LNWVRTKTPIETQHALQKFLRRPLWGEINLLFVGFGQQICRPVNPLCSACKASQWCPVGR 502
Query: 227 Q 227
+
Sbjct: 503 K 503
>gi|237842133|ref|XP_002370364.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|211968028|gb|EEB03224.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|221502817|gb|EEE28531.1| A/G-specific adenine glycosylase muty, putative [Toxoplasma gondii
VEG]
Length = 523
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F+++VAV+LS+Q+ D + L + +P+KM + +L + +G Y+ K+
Sbjct: 323 FSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMSRLSVAELSELLYGVGFYQNKARF 382
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
+ IL+ ++ IP T E L +L G+G K AN+ + + I VD H+ RI+NR
Sbjct: 383 LKEACQILLEKYGGDIPPTYEELVQLKGVGPKMANIAVHAGWNRVEGIAVDVHVHRITNR 442
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ KTP + + +L + + + V G+ +C+ P C +C S C +
Sbjct: 443 LNWVRTKTPIETQHALQKFLRRPLWGEINLLFVGFGQQICRPVNPLCSACKASQWCPVGR 502
Query: 227 Q 227
+
Sbjct: 503 K 503
>gi|89894644|ref|YP_518131.1| hypothetical protein DSY1898 [Desulfitobacterium hafniense Y51]
gi|89334092|dbj|BAE83687.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 144
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/139 (43%), Positives = 94/139 (67%)
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +++ I+ +G+Y K++NI++ HIL+ + ++P ++E LT+LPG+GRK ANV+L
Sbjct: 1 MSLAEMEQAIKELGLYHNKAKNILATCHILVANYGGEVPGSMEALTQLPGVGRKTANVVL 60
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
S AF IP + VDTH+ R+SNR+GLA G P+ +E+ L+ IP AH+WL+ HGR +
Sbjct: 61 SNAFHIPAMAVDTHVLRVSNRLGLASGTNPDLIEKQLMSCIPRSQWIQAHHWLIWHGRRI 120
Query: 206 CKARKPQCQSCIISNLCKR 224
C AR P+C C +S LC
Sbjct: 121 CAARNPKCPECPLSPLCPS 139
>gi|317507820|ref|ZP_07965521.1| A/G-specific adenine glycosylase [Segniliparus rugosus ATCC
BAA-974]
gi|316253862|gb|EFV13231.1| A/G-specific adenine glycosylase [Segniliparus rugosus ATCC
BAA-974]
Length = 311
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 79/205 (38%), Gaps = 10/205 (4%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + ++V+ ++ Q+ V + P +
Sbjct: 25 RALNRWFDEHARDLPWRAPEVTPWGVLVSEVMLQQTQVERVRPVWEEWIHRWPDPSALAE 84
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +G R+ + + + +++ E D ++P L+ L LPG+G A +L
Sbjct: 85 EPLAEALRAWGRLGYPRRAAR-LHEAARVIVREHDGRVPDRLDALLALPGVGAYTARAVL 143
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIP--PKHQYNAHYWLVLH 201
+ AFG + VD ++ R+ R+ P + L ++P P L+
Sbjct: 144 AFAFGQRSPVVDVNVRRVLRRVWHGEADGPARAADLPDALALLPEDPDEASKLSAALMEL 203
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G+ VC P C C I+ C+ +
Sbjct: 204 GQVVCAPESPNCDICPINP-CRWAR 227
>gi|296111043|ref|YP_003621424.1| A/G-specific adenine glycosylase (putative) [Leuconostoc kimchii
IMSNU 11154]
gi|295832574|gb|ADG40455.1| A/G-specific adenine glycosylase (putative) [Leuconostoc kimchii
IMSNU 11154]
Length = 340
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 19 LYTPKELEEIFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+++ + +++ + + L + + ++V+ ++ Q+ V +
Sbjct: 3 IWSEQTIKDFQRTLLDWYDKDGRANLPWRLNHEPYRVLVSEIMLQQTQVDTVLPYYERFM 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
I T Q + E+++ +G Y ++ N+ + + N+ + P++ + L LP
Sbjct: 63 AILPTVQDLAQAPEEQVLKLWEGLGYYS-RARNLQKAAQYITNDLNGHWPESADDLQALP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPK 189
G+G + I S++FG VD + +R+ +R +A K ++L I+ P
Sbjct: 122 GVGPYTSAAIASISFGEVVPAVDGNAYRVFSRLLKIDDDIANTKARKVFYDAILPIVDPL 181
Query: 190 HQYNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G A+ P
Sbjct: 182 RPGDFNQAIMDLGSSYMTAKNPD 204
>gi|91787195|ref|YP_548147.1| A/G-specific DNA-adenine glycosylase [Polaromonas sp. JS666]
gi|91696420|gb|ABE43249.1| A/G-specific DNA-adenine glycosylase [Polaromonas sp. JS666]
Length = 357
Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V + + A + ++
Sbjct: 21 RNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQHFPAVSDLAAASQDEVLALWS 80
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ + P+T E L LPGIGR A I S FG +
Sbjct: 81 GLGYYS-RARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIGRSTAAAIASFCFGERVAIL 139
Query: 157 DTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCK 207
D ++ R+ R+ LA + ++P + + L+ G +C
Sbjct: 140 DGNVKRVLTRVLGFSADLAQSANERALWDMATNLLPTQDLPDSMPRYTQGLMDLGATICA 199
Query: 208 ARKPQCQSCIISNLC 222
R+PQC C + NLC
Sbjct: 200 GRQPQCLLCPVQNLC 214
>gi|159040199|ref|YP_001539452.1| HhH-GPD family protein [Salinispora arenicola CNS-205]
gi|157919034|gb|ABW00462.1| HhH-GPD family protein [Salinispora arenicola CNS-205]
Length = 299
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 76/200 (38%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + + ++V+ ++ Q+ V A T + A
Sbjct: 11 SRWYTHHARDLPWRHPGVGAWAILVSEVMLQQTPVARVIPAWTAWLSRWPTAADLAAEPP 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ ++P LE L LPG+G A + + A
Sbjct: 71 AEAIRMWGRLGYPRRAVR-LRECAVAMVERHGGQVPDRLEQLLALPGVGTYTARAVAAFA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVE----QSLLRIIPPK--HQYNAHYWLVLHG 202
+G VDT++ R+ R + ++P + A + G
Sbjct: 130 YGQRHPVVDTNVRRVICRAVAGEPDAGPATRPADLAATEELLPTEPAAAALASAAFMELG 189
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C SC ++++C
Sbjct: 190 AVVCTARSPRCGSCPVTSIC 209
>gi|226941696|ref|YP_002796770.1| MutY [Laribacter hongkongensis HLHK9]
gi|226716623|gb|ACO75761.1| MutY [Laribacter hongkongensis HLHK9]
Length = 345
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 68/206 (33%), Gaps = 11/206 (5%)
Query: 31 LFSLK---WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + V+ ++ Q+ V + + A
Sbjct: 10 RLIAWQRQHGRHHLPWQSPDPYRVWVSEIMLQQTQVSTVLGFYERFIARFPDVATLAAAP 69
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G Y ++ N+ + ++ + P L RLPGIGR A I +
Sbjct: 70 LDDVLALWSGLGYYT-RARNLHRAARLVEDTLGGVFPVDPAELERLPGIGRSTAAAIAAF 128
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPK--HQYNAHYWLVL 200
A G +D ++ R+ R G KVE L ++ +PP +
Sbjct: 129 AAGARVAILDGNVKRVLTRWAGIEGWPGDKKVEARLWQLATLLLPPGTGDMAAYTQGQMD 188
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
G VC KP C C +S C +
Sbjct: 189 LGSLVCTRSKPDCGVCPLSLDCVAYR 214
>gi|182413913|ref|YP_001818979.1| HhH-GPD family protein [Opitutus terrae PB90-1]
gi|177841127|gb|ACB75379.1| HhH-GPD family protein [Opitutus terrae PB90-1]
Length = 344
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 12/209 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E + + + L + + +V+ + Q+ V + +
Sbjct: 13 EFQSALLGWYRAHQRRLPWRTEPSLYKTVVSEFMLQQTQVKTVLPYYDRWLAVLPNFAAL 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
E ++ +G Y + K P+T E LPG+G A
Sbjct: 73 AGASEAQVLKLWEGLGYYSRARNLHQLSQA---IHALPKPPRTPEAWRELPGVGPYTAAA 129
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL------LRIIPPKHQYNAHYW 197
I S+AFG P VD ++ RI R+ + + ++ P + +
Sbjct: 130 ITSIAFGAPAACVDGNVVRILARLTANRTLFRDSASAAKTFTPLAQALLSPSAPGDHNQA 189
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G VC + P C +C + C +
Sbjct: 190 MMELGATVCVRQNPLCLTCPVRPFCAAAR 218
>gi|209519648|ref|ZP_03268438.1| A/G-specific adenine glycosylase [Burkholderia sp. H160]
gi|209499934|gb|EDZ99999.1| A/G-specific adenine glycosylase [Burkholderia sp. H160]
Length = 353
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 14/206 (6%)
Query: 30 YLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ +L + + + + ++ ++ Q+ V + A
Sbjct: 6 ARLIAWQREHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPDVAALAA 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +G Y ++ N+ + +++ + P ++E L LPGIGR A I
Sbjct: 66 APSDDVMALWAGLGYYT-RARNLHRCAQVVVEQHGGAFPASVEALAELPGIGRSTAAAIA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIPPK----HQYNAHY 196
S AFG +D ++ R+ R+ G KVE ++ ++PP
Sbjct: 125 SFAFGARATILDGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPPNASNAEVSAYTQ 184
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C C + C
Sbjct: 185 GLMDLGATLCVRGKPDCARCPFAPDC 210
>gi|206895531|ref|YP_002246756.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
gi|206738148|gb|ACI17226.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
Length = 209
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 2/197 (1%)
Query: 29 FYLFSLKWP-SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ S +L + + + L++A LL+AQ++D +VN+ TK F + Q +
Sbjct: 1 MEILSETHKNDLHFDLEFDSPYELLIAALLAAQASDESVNEITKGFFPKFPSAQAVAEAD 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ L+ I + Y+ K++ + L+ +F ++P +E LT LPG+G+K A++++
Sbjct: 61 VETLEKAIYPVNFYKTKAKRLKECCQALVEKFHGEVPNNVEDLTELPGVGKKTASMVVLG 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
AFG P + VD H+ R+ NR+G + E+ + +++ P++ Y + HG+ +C
Sbjct: 121 AFGQPAVVVDRHVLRVLNRLGFSFKDADVA-EEEIRKMLAPEYWGKLSYSFMRHGKTICL 179
Query: 208 ARKPQCQSCIISNLCKR 224
ARKP C C + + C
Sbjct: 180 ARKPLCDKCPLKDCCPS 196
>gi|206602825|gb|EDZ39306.1| Putative endonuclease III [Leptospirillum sp. Group II '5-way CG']
Length = 210
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 100/179 (55%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ +++ +LS ++ D A++ LFE A + + +++ I +G YR K++
Sbjct: 27 PYNVLIMTILSLRTKDSVTMPASQRLFEKAPDLPSLSQMEISDIESLIFPVGFYRTKAKT 86
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
I +++ ++ EF+ KIP+TLEGL LPG+G K AN++L++ F VD H+ RI NR
Sbjct: 87 IKTIAERVLTEFEGKIPETLEGLLSLPGVGLKTANLVLTVGFEKEGFCVDIHVHRILNRW 146
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G+ +P++ + + ++P K + A+ LV G++ C+ P C C + C RI+
Sbjct: 147 GVIQTHSPDETYRIVEPVLPRKWKRRANALLVSFGQHFCRPVSPFCSVCPLLPDCDRIE 205
>gi|313904848|ref|ZP_07838220.1| A/G-specific adenine glycosylase [Eubacterium cellulosolvens 6]
gi|313470281|gb|EFR65611.1| A/G-specific adenine glycosylase [Eubacterium cellulosolvens 6]
Length = 379
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 15/215 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+L I + K +L + + + + V+ ++ Q+ V + + T
Sbjct: 18 DLTRIIEPLCSWYDRSKRDLPWRKDQDPYHVWVSEIMLQQTRVEAVKSFYRRFLQELPTV 77
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + E +L +G Y + N+ + + ++ E+ P T E L +L GIG
Sbjct: 78 EDLACCEEDRLMKLWEGLGYYS-RVRNMQTAARQIMEEYGGNFPDTREKLLKLKGIGAYT 136
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKH--------- 190
A + S+AF P VD ++ R+ R+ P + V R I
Sbjct: 137 AGAVASIAFNEPVAAVDGNVLRVITRLEKDPRDIMKQSVRTEFDRRITEALEKTCGGSVT 196
Query: 191 QYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
+ + ++ G VC P C C +++ C
Sbjct: 197 SSSFNQGMMDLGAGVCLPNAAPLCGKCPLASFCSA 231
>gi|261416623|ref|YP_003250306.1| HhH-GPD family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373079|gb|ACX75824.1| HhH-GPD family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327060|gb|ADL26261.1| putative A/G-specific adenine glycosylase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 384
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 21/220 (9%)
Query: 29 FYLFSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + EL + + + + ++ + Q+ V +
Sbjct: 19 LKRLREWFRANAAELPWRPAGLDAPRDPYAVWISETMLQQTQVSTVRDYFTRWMKRFPDV 78
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL---INEFDNKIPQTLEGLTRLPGIG 137
+ + E ++ Y + +G Y + + + + + K+P+T + L LPGIG
Sbjct: 79 EALAKAEEAEVFKYWQGLGYYSRARNILKTAKIVAALRQAQEPCKMPETRKELEALPGIG 138
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGL---------APGKTPNKVEQSLLRII-P 187
A ILS+A+ +D ++ RI +R+ + K ++ R +
Sbjct: 139 AYTAGAILSLAYHQREAILDGNLVRIFSRLYELDFLPTDKGSANKNCTEIYWEYAREVAD 198
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
Y + L+ GR VCK + P C++C + C+ ++
Sbjct: 199 SPKAYMHNEALMELGRTVCKTKSPLCETCPLRGECRAFQE 238
>gi|297243864|ref|ZP_06927794.1| A/G-specific DNA glycosylase [Gardnerella vaginalis AMD]
gi|296888285|gb|EFH27027.1| A/G-specific DNA glycosylase [Gardnerella vaginalis AMD]
Length = 331
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 23/202 (11%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + ++V ++S Q+ V + Q + ++ +G R+
Sbjct: 49 HTTPWGVLVCEVMSQQTQMSRVVPYWLTWMQTWPDAQSLAHATSAEIITAWGRLGYPRRA 108
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ S + ++ + NK+P T E L LPG+G A+ ILS A+G +DT+I R+
Sbjct: 109 LR-LQSCAQVVATTYRNKLPCTYEELIALPGVGDYTASAILSFAYGKHIAVIDTNIRRVL 167
Query: 165 NRIGLAPGKTPNKVEQSLLRI----IPPKH------------------QYNAHYWLVLHG 202
R QS + +P + + ++ G
Sbjct: 168 MRAFTGTESHGGSTTQSDRELAAAVLPEDNHVTTATANATNTTNTTCTSSVWNQAIMEIG 227
Query: 203 RYVCKARKPQCQSCIISNLCKR 224
+C AR PQC +C + C+
Sbjct: 228 ATICTARSPQCTTCPLQTWCRF 249
>gi|116618938|ref|YP_819309.1| A/G-specific DNA-adenine glycosylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116097785|gb|ABJ62936.1| A/G-specific DNA-adenine glycosylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 342
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 77/202 (38%), Gaps = 10/202 (4%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++E + + L + + + ++V+ ++ Q+ V
Sbjct: 4 WNEQTIKEFRKTLLNWYDKEGRAHLPWRVNHDPYRVLVSEIMLQQTRVDTVIPYFDRFMT 63
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E + +G Y ++ N+ + ++NE + P++ + L LPG
Sbjct: 64 SLPTVGDLATAPEDVVLKLWEGLGYYS-RARNLQKAAQFVVNELHGQWPESSDDLQSLPG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
+G A I S++F VD + +R+ +R +A K+ + I+ P+
Sbjct: 123 VGPYTAAAIASISFNEVVPAVDGNQYRVFSRLLKIDADIADTKSRKIFYDIIAPIVDPER 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G + P
Sbjct: 183 PGDFNQAIMDLGSSYMTTKNPD 204
>gi|242083156|ref|XP_002442003.1| hypothetical protein SORBIDRAFT_08g006760 [Sorghum bicolor]
gi|241942696|gb|EES15841.1| hypothetical protein SORBIDRAFT_08g006760 [Sorghum bicolor]
Length = 494
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 16/207 (7%)
Query: 32 FSLKWPSPKGELYYV--------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + + V+ ++ Q+ V + T + +
Sbjct: 68 LLRWYDAHRRDLPWRCASGGEEERAYAVWVSEVMLQQTRVPVVVGYYERWMARWPTVRSL 127
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A ++++ +G YR+ + I+ + L + GIG A
Sbjct: 128 AAATQEEVNEMWAGLGYYRRARFLLEGAKQIIEKGVFPRTASA---LREVRGIGDYTAGA 184
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWL 198
I S+AF VD ++ R+ +R+ + + +++ P + + +
Sbjct: 185 IASIAFNEVVPVVDGNVVRVISRLYAIADNPKESSTVKRFWELAGQMVDPLRPGDFNQAM 244
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C KP C C +S+ C+ +
Sbjct: 245 MELGATLCSKTKPGCSECAVSSHCQAL 271
>gi|110668394|ref|YP_658205.1| A/G-specific adenine glycosylase [Haloquadratum walsbyi DSM 16790]
gi|109626141|emb|CAJ52595.1| A/G-specific adenine glycosylase [Haloquadratum walsbyi DSM 16790]
Length = 337
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 87/222 (39%), Gaps = 8/222 (3%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNK 68
+ + C+ T +++ + + E + + + ++V+ ++S Q+ V +
Sbjct: 9 AEASIKCIDTDIDIDVFRNRLISWYEAEHREFPWRETDDPYAILVSEVMSHQTQLDRVVE 68
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTL 127
A K + T + + + + + + Y ++ + ++ +++E+D +P
Sbjct: 69 AWKDFIQRWPTVKALAGDSQSAVVTFWSEHALGYNNRASYLHEAANQVVDEYDGTVPADP 128
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRII 186
+ L L G+G AN + S AF VDT++ R+ EQ ++
Sbjct: 129 DELLSLMGVGPYTANAVASFAFNNGDAVVDTNVERVLYRVFKQIRQADDPPYEQIASALL 188
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQS--CIISNLCKRIK 226
P + + ++ G CK + P+C C C +
Sbjct: 189 PVERSRTWNNAIMELGGVACK-KTPRCDEANCPWRQWCHAYQ 229
>gi|156937657|ref|YP_001435453.1| HhH-GPD family protein [Ignicoccus hospitalis KIN4/I]
gi|156566641|gb|ABU82046.1| HhH-GPD family protein [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 7/207 (3%)
Query: 23 KELEEIFYLF---SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L E+F ++ + Y + F ++VA +LS +T+ N A ++L E
Sbjct: 2 RRLREVFGDLDDYENEFIAYYVYKRYKDPFAVLVATVLSQNTTEKNAFAAWRNLEEALGR 61
Query: 80 --PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ +L++G ++L+ IR G+ +K+ I+ + LTR+ GIG
Sbjct: 62 VTPEAVLSLGTERLKELIRPAGLQEQKASAIVEAARKWEEVKKAIEKGDKGVLTRIKGIG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A+V+L VDTH+ R++ R+GL G +V L + AH +
Sbjct: 122 EKTADVVLMSFGHE-EFPVDTHVKRVAKRLGLVDGNAYKEVSSRLKELF-KGRTREAHMY 179
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKR 224
L+L GR CKA+KP C C +S+LC +
Sbjct: 180 LILLGRKYCKAKKPLCSECPLSDLCPK 206
>gi|330813678|ref|YP_004357917.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486773|gb|AEA81178.1| A/G-specific adenine glycosylase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 345
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 10/211 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYVN-------HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ I + + L + + + ++++ + Q+ V ++
Sbjct: 5 QTISKKIITWYKKHQRSLPWRSYTSSSDRDYKVLLSEFMLQQTKVSTVVPYFNKFYKKFR 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + + +G YR ++ N+ + +++ + + K+P + L LPGIG
Sbjct: 65 TIRALSKSRITSVLKLWEGLGYYR-RARNLHQTAKLVLQKHNGKLPDSFLDLKNLPGIGD 123
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN--KVEQSLLRIIPPKHQYNAHY 196
A+ ILS+A P IG+D ++ R+ +R+ +E+ L + K
Sbjct: 124 YTASAILSIAKDQPFIGIDGNVKRVISRVFNLKHNKKLLLSIEKKLNSMKVKKGSSELMQ 183
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G +C +P C C I + C K+
Sbjct: 184 GIMELGALLCLPIRPGCTKCPIKSHCISFKK 214
>gi|313126168|ref|YP_004036438.1| a/g-specific DNA-adenine glycosylase [Halogeometricum borinquense
DSM 11551]
gi|312292533|gb|ADQ66993.1| A/G-specific DNA-adenine glycosylase [Halogeometricum borinquense
DSM 11551]
Length = 315
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 89/212 (41%), Gaps = 8/212 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P++++++ + + + + + + ++V+ ++S Q+ V +A + +
Sbjct: 18 PEDVDDVRDALVSWYEADHRDFPWRRTDDPYEILVSEVMSQQTQLGRVVEAWEDFLDEWP 77
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + ++ + Y +++ + + +I E+D + P++ + L+ L G+G
Sbjct: 78 TAADLAAADRSDVVSFWSGHSLGYNNRAKYLHEATRQVIEEYDGEFPRSPDELSELMGVG 137
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN + S AF VDT++ R+ +R E ++PP +
Sbjct: 138 PYTANAVASFAFNNGDAVVDTNVKRVLHRAFAEIHNADDPDYETVANTLMPPGESRIWNN 197
Query: 197 WLVLHGRYVCKARKPQCQS--CIISNLCKRIK 226
++ G C +KP+C C C +
Sbjct: 198 AIMELGGVAC-GKKPRCDEASCPWREWCHAYQ 228
>gi|227431382|ref|ZP_03913433.1| A/G-specific DNA-adenine glycosylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352845|gb|EEJ43020.1| A/G-specific DNA-adenine glycosylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 342
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 77/202 (38%), Gaps = 10/202 (4%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + ++E + + L + + + ++V+ ++ Q+ V
Sbjct: 4 WNEQTIKEFRKTLLNWYDKEGRVHLPWRVNHDPYRVLVSEIMLQQTRVDTVIPYFDRFMT 63
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + E + +G Y ++ N+ + ++NE + P++ + L LPG
Sbjct: 64 SLPTVGDLATAPEDVVLKLWEGLGYYS-RARNLQKAAQFVVNELHGQWPESSDDLQSLPG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKH 190
+G A I S++F VD + +R+ +R +A K+ + I+ P+
Sbjct: 123 VGPYTAAAIASISFNEVVPAVDGNQYRVFSRLLKIDADIADTKSRKIFYDIIAPIVDPER 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G + P
Sbjct: 183 PGDFNQAIMDLGSSYMTTKNPD 204
>gi|146078123|ref|XP_001463464.1| endonuclease III [Leishmania infantum JPCM5]
gi|134067550|emb|CAM65829.1| putative endonuclease III [Leishmania infantum JPCM5]
gi|322496896|emb|CBZ31966.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 258
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LSAQ+ DV A L + T Q + A+ E +L +I +G + KK++NI
Sbjct: 50 FHTLVALMLSAQTKDVVTAAAMDTLIKHGLTAQSVHAMTETELDKHICKVGFHNKKAKNI 109
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ IL+ +D ++P+ L LPG+G K AN+ A VDTH+ RIS R
Sbjct: 110 KEVAAILMKNYDGEVPREYAELIALPGVGPKMANLFFQDADHRVIGIGVDTHVHRISQRY 169
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK-R 224
P KTP ++L +P +H + +V G+ VC +P+C C +S++C
Sbjct: 170 RWVPSTVKTPEDTRKALESWLPREHWGTINSLMVGLGQTVCTPLRPKCGICELSDICPNA 229
Query: 225 IKQ 227
K+
Sbjct: 230 FKE 232
>gi|71905706|ref|YP_283293.1| A/G-specific DNA-adenine glycosylase [Dechloromonas aromatica RCB]
gi|71845327|gb|AAZ44823.1| A/G-specific DNA-adenine glycosylase [Dechloromonas aromatica RCB]
Length = 345
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 9/191 (4%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + N + + ++ ++ Q+ + + + +
Sbjct: 20 RHDLPWQNTCDPYRVWLSEIMLQQTQVSTATPYYLRFLSSFPDVTALATAPIEVVIEHWA 79
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ + P ++E L LPGIGR A I + +FG +
Sbjct: 80 GLGYYA-RARNLHRCAQQIVTVYAGSFPDSVEKLAELPGIGRSTAAAIAAFSFGKRAAIL 138
Query: 157 DTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G K+ ++P + L+ G +C KP
Sbjct: 139 DGNVKRVLCRQFGIDGFPGSVTIDRKLWTLAESLLPERDIEVYTQGLMDLGATLCTRSKP 198
Query: 212 QCQSCIISNLC 222
+C C ++ C
Sbjct: 199 RCGDCPVAAAC 209
>gi|157415839|ref|YP_001483095.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 81116]
gi|157386803|gb|ABV53118.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 81116]
gi|307748476|gb|ADN91746.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni M1]
gi|315931664|gb|EFV10625.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 327]
Length = 339
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 61 KSVLERFYFPFLKKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGVYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKGA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC ++ +C C + + C+
Sbjct: 180 KELLNVNHAFDHNQALLDVGALVCVSKNAKCGICPLYDFCQ 220
>gi|145590366|ref|YP_001152368.1| HhH-GPD family protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282134|gb|ABP49716.1| HhH-GPD family protein [Pyrobaculum arsenaticum DSM 13514]
Length = 218
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKM 83
+ + +P N F +VAV+LS ++D N KA ++L + + TP+ +
Sbjct: 10 RHVRLRLEE-FIAPVVWREGGNLFETLVAVVLSQNTSDKNAFKAFQNLKKRLGSITPESL 68
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG-------LTRLPGI 136
I +L+ I+ G+YR+++ + +L+ I G L LPG+
Sbjct: 69 RGISLGELEELIKPAGMYRQRARYLKALADAFITLEITPEKLVKMGADAARKLLMSLPGV 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
GRK A+V+L+ P VDTHI RI+ R G + + + +P + H
Sbjct: 129 GRKTADVVLANLGL-PAFPVDTHITRIAKR--WGVGSRYEDISRWFMEQLPKERYLEFHL 185
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GR +C+AR P+C+ C I C K
Sbjct: 186 KLIQFGRDICRARNPRCEECPIGERCPSFK 215
>gi|158291047|ref|XP_312566.4| AGAP002388-PA [Anopheles gambiae str. PEST]
gi|157018187|gb|EAA08063.4| AGAP002388-PA [Anopheles gambiae str. PEST]
Length = 385
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +V+++LS+Q+ D ++ L + TP+ ++A LQ I +G Y+ K+ I
Sbjct: 185 YHCLVSLILSSQTKDKANHECMLRLKKHGLTPESIVATDSAVLQKLIYPVGFYKNKTRFI 244
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+S ILI+++ IP ++EGL +LPG+G K A++ + A+ I T VDTH+ RI+N +
Sbjct: 245 KEMSQILIDQYGGDIPNSIEGLLKLPGVGTKMAHLCMRSAWNIVTGIGVDTHVHRIANWL 304
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P K P Q+L + +P + ++ LV G+ +C R P+C C + +C
Sbjct: 305 KWVPKETKNPENTRQALEKWLPYELWDEVNHLLVGFGQTICTPRFPRCNDCSNAPICPA 363
>gi|229552286|ref|ZP_04441011.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|258539695|ref|YP_003174194.1| endonuclease III [Lactobacillus rhamnosus Lc 705]
gi|229314358|gb|EEN80331.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|257151371|emb|CAR90343.1| Endonuclease III [Lactobacillus rhamnosus Lc 705]
Length = 216
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T E ++F +P P+ L N F ++VAV+LSAQ+TDV VN T LF T
Sbjct: 1 MTDSEARQLFEQIMALYPDPQPTLQAQNPFQILVAVMLSAQTTDVAVNAVTPELFAAYPT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P M A + I +G+YR K+ ++ +LS IL+ ++D ++P L +LPG+G+K
Sbjct: 61 PAAMAAASVTDISKKISRLGLYRTKAAHLKALSAILVEKYDGQVPANAADLVKLPGVGKK 120
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWL 198
A V+LS AFGIP + VDTH+ RI +GL K TP +++ L ++P H L
Sbjct: 121 TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQSRLETLMPKSTWIKLHRSL 180
Query: 199 VLHGRYVCKARKPQ 212
+ GR +AR PQ
Sbjct: 181 IRFGREHLRARDPQ 194
>gi|46191127|ref|ZP_00206685.1| COG1194: A/G-specific DNA glycosylase [Bifidobacterium longum
DJO10A]
Length = 319
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 46/238 (19%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
W + +L + + ++V+ ++S Q+ V E + + +
Sbjct: 3 AWWEANARDLPWRFGRATPWGVLVSEVMSQQTQMSRVVPYWTDWMERWPDARALAEAPKA 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ + + ++ ++ +K+P+T + LT LPGIG A+ ++S AF
Sbjct: 63 EVITAWGRLGYPRRALR-LQECARVVAEDYADKLPRTYDELTALPGIGDYTASAVMSFAF 121
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPP----------------- 188
G +DT+I R+ +R+ L R++P
Sbjct: 122 GERIAVIDTNIRRVLSRVFLGVESRGGATSPAERALANRMLPKDEILGCDADVADNAGSA 181
Query: 189 -------------------KHQY-NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G +C A+ P C +C I++ C +K
Sbjct: 182 EHVVNSTIRGGKRSRLHRGERPSVTWNQSVMELGAVICTAKSPLCDTCPIADDCAFLK 239
>gi|183220677|ref|YP_001838673.1| putative A/G-specific DNA glycosylase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910778|ref|YP_001962333.1| A/G-specific DNA glycosylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775454|gb|ABZ93755.1| A/G-specific DNA glycosylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779099|gb|ABZ97397.1| Putative A/G-specific DNA glycosylase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 353
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ K +L + + + ++ ++ Q+ + ++ P+ +
Sbjct: 5 KKLRDWYLLHKRDLPFRKKKQAYPIWISEVMLQQTRVAAMLPLFENFVNRFPNPESLAKA 64
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E+++ ++ + +G Y ++ NI + ++ +++ P+ L+ + +LPGIG A ILS
Sbjct: 65 TEEEVLSFWKGLGYYS-RARNIRKAAIQIVQQYNGSFPKDLDSVLKLPGIGNYTARAILS 123
Query: 147 MAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLL----RIIPPKHQYNAHYWLVLH 201
+++ +P +D ++ R+ +R + E+ L + + + ++
Sbjct: 124 ISYDLPLAVLDGNVKRVLSRYYGYTKNILGPQAEKELQLKADGFLNLDFPGDHNQAVMEL 183
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C P+C C + + C
Sbjct: 184 GATICLPESPKCLVCPLMDGC 204
>gi|295698498|ref|YP_003603153.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Candidatus Riesia pediculicola USDA]
gi|291157058|gb|ADD79503.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Candidatus Riesia pediculicola USDA]
Length = 215
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 122/203 (60%), Gaps = 3/203 (1%)
Query: 27 EIFYLFSLK--WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
EI F + + S +L ++F L+++ +LS +S + VN T+ L+ A+ KM+
Sbjct: 8 EILNRFRRRDTY-SSNTDLCVNSNFELLISTVLSTRSRNSLVNLVTEDLYRTANNANKMI 66
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+G KK++ I IG+ R KS+NI+++ ILI ++ +P T + L LPG+GRK +NV+
Sbjct: 67 FLGSKKIKKIIEKIGLSRVKSKNILNICQILIQKYKGNVPNTRKSLECLPGVGRKVSNVV 126
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L++ FG TI VDTH+FR+ NR G A + K+E+ LL I+P + + HY LHG+
Sbjct: 127 LNIGFGYSTIAVDTHVFRVCNRTGFAISNSYLKLEKYLLSIVPIRFRRRFHYLFFLHGKV 186
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C + P C C IS+LC+ +
Sbjct: 187 ICTYKNPSCLCCFISDLCEYKNK 209
>gi|328772912|gb|EGF82949.1| hypothetical protein BATDEDRAFT_8659 [Batrachochytrium
dendrobatidis JAM81]
Length = 332
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V V + + T + A + + +G Y +
Sbjct: 58 AYEVWVSEIMLQQTQVVTVVQYYQRWMHAWPTIHSLAAASLEDVNKIWSGLGYYSRAKRL 117
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
++ + E +PGIG A I S+AF IP+ VD ++ R+ +R+
Sbjct: 118 YQGAQIVVSKYGGHLPRTAEELEQCIPGIGPYTAGAIASIAFNIPSPLVDGNVIRVLSRL 177
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ K + V+++ I+ P N + L+ G VC + PQC +C + + C
Sbjct: 178 CAFGSDPKARSSVKETAKEIVDPHMPGNFNQALMDLGATVCTPKAPQCNTCPLQSQCMAY 237
>gi|154411860|ref|XP_001578964.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121913166|gb|EAY17978.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 239
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
F ++++++LS+Q+ D + A L +I ++ + + + I +G +K++
Sbjct: 45 FQILISLMLSSQTKDQMTHAAALKLQKIEGGFNAPNLMKADRETILSCISCVGFANRKTD 104
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN-VILSMAFGIPTIGVDTHIFRISN 165
I + ++D+ +P+TL+ T G+G K + IGVD H+ RISN
Sbjct: 105 YIREAAKRCHEKYDDDVPKTLKEFTEFKGVGIKMGTLAMARCWNEQIGIGVDVHVHRISN 164
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+G P++ E +L +++P ++ LV G+ VC ++K +C+ C IS+ C+
Sbjct: 165 LLGWVKTNHPDETETALQKVLPKDIWPEVNHCLVGFGQTVCGSKKRKCEECPISSTCRYY 224
>gi|33241238|ref|NP_876180.1| A/G-specific DNA glycosylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238768|gb|AAQ00833.1| A/G-specific DNA glycosylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 400
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 9/188 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + VA ++ Q+ V + + ++ + +G Y +
Sbjct: 60 YPIWVAEVMLQQTQLKVVLPYWEKWMRTFPILPDFAHALDHEVLLLWQGLGYYSRAHRMH 119
Query: 109 ISLSH------ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ + + P ++ LPGIGR A I+S AF +P +D ++ R
Sbjct: 120 QASKKLLDIIGHADSLDPDSWPSDIDSWIALPGIGRNTAASIISSAFNVPASLLDGNVKR 179
Query: 163 ISNR---IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
I R K ++ + ++ N + L+ G VC + P+C C
Sbjct: 180 ILARLIGSKKILSKDSARLWKLSDLLLDNHEPRNFNQALMDLGSTVCTIKSPKCCCCPWK 239
Query: 220 NLCKRIKQ 227
C Q
Sbjct: 240 KYCLAYHQ 247
>gi|157864920|ref|XP_001681168.1| endonuclease III [Leishmania major strain Friedlin]
gi|68124463|emb|CAJ02303.1| putative endonuclease III [Leishmania major strain Friedlin]
Length = 257
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LSAQ+ DV A L + T Q + A+ E +L +I +G + K+ NI
Sbjct: 50 FHTLVALMLSAQTKDVVTAAAMDTLIKRELTVQSVHAMTETELDKHICKVGFHNTKARNI 109
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ IL+ +D K+P+ L LPG+G K AN+ A VDTH+ RIS R
Sbjct: 110 KEVAAILMKNYDGKVPREYAELIALPGVGPKMANLFFQDADHRVIGIGVDTHVHRISQRY 169
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK-R 224
P KTP ++L +P +H + +V G+ VC +P+C C +S++C
Sbjct: 170 RWVPSTVKTPEDTRKALESWLPREHWGTINSLMVGLGQTVCTPLRPKCDICELSDICPNA 229
Query: 225 IKQ 227
K+
Sbjct: 230 FKE 232
>gi|320010073|gb|ADW04923.1| HhH-GPD family protein [Streptomyces flavogriseus ATCC 33331]
Length = 300
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + ++V+ + Q+ V + P + A +
Sbjct: 21 WFEQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWMARWPRPADLAADAPGE 80
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P L LPGIG A + S A+G
Sbjct: 81 AVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSEHGQLLALPGIGEYTAAAVASFAYG 139
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPK--HQYNAHYWLVLHGRY 204
+DT++ R+ R PN + ++P + G
Sbjct: 140 QRHAVLDTNVRRVFARAATGIQYPPNATTAAERKLARALLPEDDGRAAGWAAATMELGAL 199
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ C C I++ C
Sbjct: 200 VCTAKNEDCTRCPIADQC 217
>gi|302913326|ref|XP_003050896.1| hypothetical protein NECHADRAFT_93757 [Nectria haematococca mpVI
77-13-4]
gi|256731834|gb|EEU45183.1| hypothetical protein NECHADRAFT_93757 [Nectria haematococca mpVI
77-13-4]
Length = 618
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 26/220 (11%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
P L + + ++ ++ Q+ V + + A +
Sbjct: 152 KDHLPDDLRNLLERRAYEVWISEIMLQQTRVAVVIDYWNKWMAKWPSIHDLAAASADDVL 211
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT--RLPGIGRKGANVILSMAFG 150
+ R +G Y + + + ++ + + + ++PG+GR A I ++ FG
Sbjct: 212 SAWRGLGYYSRATRIHEASKLVVKDPAMKGLLPSCTQDLEAKVPGVGRYTAGAISAIVFG 271
Query: 151 IPTIGVDTHIFRISNRI----------------GLAPGKTPNKVEQSLLRIIPP------ 188
VD ++ R+ +R A K P
Sbjct: 272 QAAPMVDGNVLRVLSRQLGLLGNVKTTKVVIDTLWAAADALVKAVARDETGTPDGEEAET 331
Query: 189 -KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC KP C C I++ C+ +
Sbjct: 332 SDRPGRWGQALMELGSTVCVP-KPNCGECPITSTCRAYAE 370
>gi|256810186|ref|YP_003127555.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
gi|256793386|gb|ACV24055.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
Length = 344
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 107/184 (58%), Gaps = 3/184 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++V+ ++SA++ D + +K LF+ + +L I E+KL + I G YR K+
Sbjct: 24 RDPFKVLVSTIISARTKDEVTEEVSKKLFKEVKSVDDLLNIEEEKLADLIYPAGFYRVKA 83
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+ L+ IL +++ K+P +LE L +LPG+GRK AN+++++AF I VDTH+ RI N
Sbjct: 84 KNLKKLAKILKEKYNGKVPDSLEELLKLPGVGRKTANLVITLAFDKDGICVDTHVHRICN 143
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCK 223
R + +TP + E L + +P K+ + LV+ G+ +C KP+C C I C
Sbjct: 144 RWEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFGKEICSP-KPKCNKCFEEIRKKCP 202
Query: 224 RIKQ 227
++
Sbjct: 203 YYEK 206
>gi|330991229|ref|ZP_08315181.1| putative A/G-specific adenine glycosylase yfhQ [Gluconacetobacter
sp. SXCC-1]
gi|329761722|gb|EGG78214.1| putative A/G-specific adenine glycosylase yfhQ [Gluconacetobacter
sp. SXCC-1]
Length = 351
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 16/207 (7%)
Query: 35 KWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + L + + + + ++ ++ Q+T V + +
Sbjct: 3 WYDRHRRILPWRALPGQSADPYRVWLSEIMLQQTTVTAVIPYYERFLAAFPDVGALARAP 62
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ ++ +G Y + ++ + P T+EGL LPGIG A I ++
Sbjct: 63 QDRVMALWAGLGYY--ARARNLHACAQVVAARGGRFPDTVEGLLELPGIGAYTAAAIAAI 120
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRII----PPKHQYNAHYWLVL 200
AFG P + VD ++ R++ R+ P + + + + + L
Sbjct: 121 AFGRPVVPVDGNVERVTTRLFALTDPLPGARKAIARQAMGLNGDAPARARPSDFAQALFD 180
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C R P C C + C +Q
Sbjct: 181 LGAGICTPRTPACVLCPWRDACAAHRQ 207
>gi|283953765|ref|ZP_06371296.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 414]
gi|283794806|gb|EFC33544.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 414]
Length = 339
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 91/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T Q + E +L + +G Y ++ N+ + +++F
Sbjct: 61 KSVLERFYFPFLKKFPTLQSLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAN 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ L L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKELHDLKKLSGIGAYTAGAIACFGYNQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G +C ++ +C C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALLCVSKNAKCGICPLYDFCQ 220
>gi|170289841|ref|YP_001736657.1| EndoIII-related endonuclease [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173921|gb|ACB06974.1| Predicted EndoIII-related endonuclease [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 223
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 23 KELEEIFYLF------SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
K+ +EI ++ S N F +VA ++S + D N +A K+L E
Sbjct: 2 KDGKEILKRLSFLDFREDEYASLVAS-RSSNPFETLVATVISQNTNDRNTMRAMKNLKER 60
Query: 77 --ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL-----INEFDNKIPQTLEG 129
TP+K++ + +++L+ IR G++++K++ + ++ L + + +
Sbjct: 61 LGYLTPEKIMELSDEELEELIRPAGLHKQKAKYLKLIAERLSGGALEEILSLETEEARDR 120
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L +PGIG K A+V+L G TIGVD HI R+S+R+G++ G ++L+ I K
Sbjct: 121 LLEIPGIGPKTADVLL-SLMGRETIGVDRHIARVSSRLGISDGSY-EATRRALMNIFDKK 178
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH L+ GR C+ R P+C C + ++C
Sbjct: 179 DYLRAHLLLIKLGREYCRPRNPRCGECPLRDICDF 213
>gi|262172435|ref|ZP_06040113.1| A/G-specific adenine glycosylase [Vibrio mimicus MB-451]
gi|261893511|gb|EEY39497.1| A/G-specific adenine glycosylase [Vibrio mimicus MB-451]
Length = 341
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TPK+ +E +L + + + +L + + + ++V+ ++ Q+ V V +
Sbjct: 6 LTPKQFQE--HLLTWQRQHGRHDLPWQQNPSPYRVLVSEVMLQQTQVVTVIPYFERWMAS 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + E ++ N+ + +G Y ++ N+ + + + ++ P ++ L +PG+
Sbjct: 64 FPTIEALANATEDEVMNHWQGLGYYS-RARNLRKAAIYIHETWADEFPSDVKTLQEIPGV 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQ 191
GR A I S AF VD ++ R+ R G ++ + P H
Sbjct: 123 GRYTAGAIASFAFDTYGPIVDGNVKRLFCRYFGIEGVPGTSAVDKQLWSTAEAYTPTIHN 182
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ G +CK + P C +C + C +
Sbjct: 183 RQYAQGLLDMGATLCKPKSPDCDACSFTTTCIAYQ 217
>gi|206895438|ref|YP_002247351.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
gi|206738055|gb|ACI17133.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
Length = 209
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 26 EEIFYLFSLKW---PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+E+ +L + + P K + ++++ +LSA++ D LF TP
Sbjct: 11 QEVVHLLAQTYTFDPYAK-----NDPTRVLLSCILSARTKDEITYPTADRLFSFYPTPLS 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L+N ++ +G YR+K++ + + + +P+T + LT++PGIG K A
Sbjct: 66 LCQAHLTDLENILKPVGFYRQKAKYVRDAACYIEKWG---VPKTTKQLTQVPGIGPKCAA 122
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
++ + +GIP I VD H+ RIS R+G + + L ++P ++ LV
Sbjct: 123 IVRAFGWGIPDIAVDAHVQRISKRLGWTEEKDDHLRTQTKLKTLLPIHEWVYVNHLLVSL 182
Query: 202 GRYVCKARKPQCQSCIISNLCKR 224
GR+VC+ ++P C C++++LC
Sbjct: 183 GRHVCRPQRPLCHQCVLNSLCPY 205
>gi|154332722|ref|XP_001562623.1| endonuclease III [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059626|emb|CAM41746.1| putative endonuclease III [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 259
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LSAQ+ D+ A L + T Q + A+ +L +I +G + K ++I
Sbjct: 50 FQTLVALMLSAQTKDIVTATAMDALIKRGLTAQSIHAMTTTELDMHICKVGFHNTKVKHI 109
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ ILI ++ K+P+ E L LPG+G K AN+ A VDTH+ RIS R
Sbjct: 110 KEVAAILIKDYGGKVPREYEELIALPGVGPKMANLFFQDADHRTVGIGVDTHVHRISQRY 169
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK-R 224
P KTP ++L +P KH + +V G+ VC P+C C +S++C
Sbjct: 170 RWVPSTVKTPEDTRKALESWLPQKHWGTINSLMVGLGQTVCTPLYPKCGICELSDICPNA 229
Query: 225 IKQ 227
K+
Sbjct: 230 FKE 232
>gi|207108339|ref|ZP_03242501.1| endonuclease III (nth) [Helicobacter pylori HPKX_438_CA4C1]
Length = 170
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 97/166 (58%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L T ++ ++I L +P+ EL++ N + L+VA +LSAQ TD VN+ T LFE
Sbjct: 5 LKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNQITPKLFE 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + ++++ I+++ + KS+++IS++ ++ +F IP T L L G
Sbjct: 65 KYPSVSDLALASLEEVKEIIQSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQNELMSLDG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+G+K ANV+LS+ F I VDTH+FR ++R+GL+ TP K E+
Sbjct: 125 VGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEE 170
>gi|195115659|ref|XP_002002374.1| GI17349 [Drosophila mojavensis]
gi|193912949|gb|EDW11816.1| GI17349 [Drosophila mojavensis]
Length = 341
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V ++LS+Q+ D +A L TP ++ + ++L+ + + Y+ K++ +
Sbjct: 156 FHILVGLILSSQTKDETTFEAMNRLKAQTLTPARLKDLPVEELERLLHPVSFYKNKAKYL 215
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL+++++ IP ++ L +LPG+G K A++ ++ A+ T VDTH+ RI+NR+
Sbjct: 216 KQTSEILVDKYNEDIPNNIKELLKLPGVGPKMAHICMATAWQEITGIGVDTHVHRIANRL 275
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P K P + L +P ++ LV G+ +C KP C C+ ++C
Sbjct: 276 AWLKKPTKEPEQTRIQLESWLPRPLWAEVNHLLVGFGQTICTPVKPNCSECLNKDICPA 334
>gi|121608041|ref|YP_995848.1| A/G-specific adenine glycosylase [Verminephrobacter eiseniae
EF01-2]
gi|121552681|gb|ABM56830.1| A/G-specific DNA-adenine glycosylase [Verminephrobacter eiseniae
EF01-2]
Length = 370
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 11/235 (4%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQ 60
+S + + G + + + E + + + + ++ ++ Q
Sbjct: 1 MSDARPPEGAHTAGAGTPVSVQGVAERVMAWQASHGRHHLPWQNSRDPYRVWLSEIMLQQ 60
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V + + ++ +G Y ++ N+ + ++ E
Sbjct: 61 TQVRTVLEYYACFLARFPDVGALAKAPRDEVMGLWSGLGYYS-RARNLHRCAQQVMAEHG 119
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTP 175
P T E L LPGIGR A I + F +D + R+ R LA
Sbjct: 120 GAFPNTAEALATLPGIGRSTAGAIAAFCFSERVPILDANARRVLTRLSGFARDLASAGNE 179
Query: 176 NKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++P + L+ G +C A+ P+C C ++ C +
Sbjct: 180 RLLWELAQSLLPTRDLAQTMPRYTQGLMDLGASLCTAQAPRCSLCPLTGSCVAFR 234
>gi|228470066|ref|ZP_04054975.1| A/G-specific adenine glycosylase [Porphyromonas uenonis 60-3]
gi|228308204|gb|EEK17059.1| A/G-specific adenine glycosylase [Porphyromonas uenonis 60-3]
Length = 363
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 10/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + +L + + + + ++ ++ Q+ E T +
Sbjct: 4 LLTKLHSWYQENHRKLPWRDIHDPYRIWLSEVILQQTRIDQGTSYYLRFVEHYPTVSDLA 63
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ +G Y ++ N+ + ++++E P + + LPGIG A +
Sbjct: 64 IAPLDEVLKLWEGLGYYS-RARNLHRAAQLIVHELGGTFPADYQSVRALPGIGDYTAGAV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK------HQYNAHYWL 198
LS A+ P VD ++ R+ +R+ + + + + H + +
Sbjct: 123 LSFAYDQPYPAVDGNVLRVLSRLYASEEPIDTTQGKKYYTALARQLVEKAPHPGLHNQAM 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ G +C + C C + + C
Sbjct: 183 IELGALICTPQLCDCTRCPVRSECPS 208
>gi|148925764|ref|ZP_01809452.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145845774|gb|EDK22865.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 339
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC + +C C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALVCVGKNAKCGICPLYDFCQ 220
>gi|284039058|ref|YP_003388988.1| DNA-(apurinic or apyrimidinic site) lyase [Spirosoma linguale DSM
74]
gi|283818351|gb|ADB40189.1| DNA-(apurinic or apyrimidinic site) lyase [Spirosoma linguale DSM
74]
Length = 220
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Query: 36 WPSPKG----ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+P E Y F +++ ++S ++ D + LFE A TP+++L + L
Sbjct: 21 YPKAAMFDLFERGYNTLFEQLISCIISIRTLDETTIPVSLRLFERARTPEQLLTLDVAAL 80
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +K+ ++ ++ ++NEF+ ++P LT L G+G K AN+ L +A G
Sbjct: 81 TELLYGTTYPDQKAYTMLGIAGRIVNEFNGELPADYATLTSLKGVGPKCANLALGVATGQ 140
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
I VD H+ R+ NR G K P + + L +P + + + L+ G+++C P
Sbjct: 141 AAISVDVHVHRVVNRWGYVHTKQPEQTLKVLETQVPHEQWVDINRLLMPFGKHICTGTLP 200
Query: 212 QCQSCIISNLCK 223
C +C + C+
Sbjct: 201 HCSTCPVLPWCE 212
>gi|145590095|ref|YP_001156692.1| A/G-specific adenine glycosylase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048501|gb|ABP35128.1| A/G-specific adenine glycosylase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 381
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 83/220 (37%), Gaps = 16/220 (7%)
Query: 20 YTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ + L + + + + V+ ++ Q+ V + +
Sbjct: 1 MSKTVIDSFSKKLIAWHAQSGRSGLPWQGNRDPYAVWVSEIMLQQTQVATVLERYPRFMK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T +K+ A + +G Y ++ N+ + + ++ EF K PQ L +L G
Sbjct: 61 RFPTVKKLAAADVDDVLAEWAGLGYYS-RARNLHACAQQIVREFAGKFPQDPALLEQLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIP--P 188
IGR A I + AF +D ++ RI R+ G +K + ++P P
Sbjct: 120 IGRSTAGAIAAFAFHERAPILDANVKRILARLFAIEGAIQDKAVNDSLWKLATELLPLKP 179
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCKR 224
+ L+ G C +RKP C + C + C+
Sbjct: 180 QDMPTYTQALMDFGATWCTSRKPVCLSGEKKCPFAKDCQA 219
>gi|332300322|ref|YP_004442243.1| A/G-specific adenine glycosylase [Porphyromonas asaccharolytica DSM
20707]
gi|332177385|gb|AEE13075.1| A/G-specific adenine glycosylase [Porphyromonas asaccharolytica DSM
20707]
Length = 362
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 73/206 (35%), Gaps = 10/206 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + +L + + + + ++ ++ Q+ E T +
Sbjct: 4 LLNKLHCWYQENHRKLPWRDIHDPYRIWLSEVILQQTRIDQGTSYYLRFVEHYPTVSDLA 63
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A ++ +G Y ++ N+ + I++ + P + + LPGIG A +
Sbjct: 64 AAPLDEVLKLWEGLGYYS-RARNLHRAAQIIVQDLGGTFPTDYKSVRALPGIGDYTAGAV 122
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK------HQYNAHYWL 198
LS A+ P VD ++ R+ +R+ + + + + H + +
Sbjct: 123 LSFAYDQPYPAVDGNVLRVLSRLYASEEPIDTTQGKKYYTALAKQLVEKAPHPGLHNQAM 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
+ G +C + C C I + C
Sbjct: 183 IELGALICTPQLCDCTRCPIRSECPS 208
>gi|326441681|ref|ZP_08216415.1| A/G-specific adenine glycosylase [Streptomyces clavuligerus ATCC
27064]
Length = 302
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 11/211 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
P + + + +L + + ++V+ + Q+ V +
Sbjct: 11 PADAASLHGPVIAWFDQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLARW 70
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P + A + +G R+ + + + +P L LPGIG
Sbjct: 71 PRPADLAAEAPGEAVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSDHAQLLALPGIG 129
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQ-- 191
A + S A+G +DT++ R+ R P + ++P
Sbjct: 130 EYTAAAVASFAYGQRHAVLDTNVRRVFARAATGIQYPPTATTAAERKLARALLPDDESTA 189
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G VC AR +C C I++ C
Sbjct: 190 SRWAAASMELGALVCTARSEECGRCPIADRC 220
>gi|294813207|ref|ZP_06771850.1| Adenine glycosylase [Streptomyces clavuligerus ATCC 27064]
gi|294325806|gb|EFG07449.1| Adenine glycosylase [Streptomyces clavuligerus ATCC 27064]
Length = 308
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 11/211 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
P + + + +L + + ++V+ + Q+ V +
Sbjct: 17 PADAASLHGPVIAWFDQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLARW 76
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P + A + +G R+ + + + +P L LPGIG
Sbjct: 77 PRPADLAAEAPGEAVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSDHAQLLALPGIG 135
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQ-- 191
A + S A+G +DT++ R+ R P + ++P
Sbjct: 136 EYTAAAVASFAYGQRHAVLDTNVRRVFARAATGIQYPPTATTAAERKLARALLPDDESTA 195
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G VC AR +C C I++ C
Sbjct: 196 SRWAAASMELGALVCTARSEECGRCPIADRC 226
>gi|126631837|gb|AAI33923.1| LOC100008368 protein [Danio rerio]
Length = 340
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L E + +L + ++ L I +G +R K + I
Sbjct: 78 YQVLISLMLSSQTKDQVTAGAMQRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYI 137
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ ++ EF IP T+EGL RLPG+G K A++ + +A+ + VDTH+ RISNR+
Sbjct: 138 KQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRL 197
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G KTP + ++L +P ++ LV G+ VC P C C+ + C
Sbjct: 198 GWTKKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQHTCPS 256
>gi|256826228|ref|YP_003150188.1| A/G-specific DNA glycosylase [Kytococcus sedentarius DSM 20547]
gi|256689621|gb|ACV07423.1| A/G-specific DNA glycosylase [Kytococcus sedentarius DSM 20547]
Length = 311
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + + ++V+ ++ Q+ V V E TP + G
Sbjct: 29 LAHWYARHARDLPWRHDDCSPWGVLVSEVMLQQTPVVRVLPVWTTWMERWPTPADLADAG 88
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+G R+ + + + + ++P E L LPGIG A + +
Sbjct: 89 PGAAVRAWGRLGYPRRALRLV-DAATAIRDHHGGEVPSDEEALRSLPGIGEYTAAAVAAF 147
Query: 148 AFGIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLL-RIIPP--KHQYNAHYWLVLH 201
AFG + VDT+I R+ R P + E++L ++P + +
Sbjct: 148 AFGQRAVVVDTNIRRVQARAVSGRALPAPSYTAAERALATALLPAGAAESVRWNISTMEL 207
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P C C + + C
Sbjct: 208 GALVCTARNPACGQCPLVDPC 228
>gi|332528610|ref|ZP_08404592.1| A/G-specific adenine glycosylase [Hylemonella gracilis ATCC 19624]
gi|332041926|gb|EGI78270.1| A/G-specific adenine glycosylase [Hylemonella gracilis ATCC 19624]
Length = 367
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + + A +
Sbjct: 28 RHDLPWQNTRDPYRVWLSEIMLQQTQVTTVRDYYARFLQRFPDVATLAAAPLDDVLALWS 87
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + ++ P+ L LPGIGR A I S+ FG +
Sbjct: 88 GLGYYT-RARNLHACAQQVMALHAGAFPRDAVTLQTLPGIGRSTAAAIASICFGERVAIL 146
Query: 157 DTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQ----YNAHYWLVLHGRYVCK 207
D ++ R+ R LA + + ++P ++ G VC
Sbjct: 147 DGNVKRVLTRALGFDGDLAQAAQEKTLWKLADELLPRDDLDQHMPRYTQAVMDMGATVCL 206
Query: 208 ARKPQC----QSCIISNLCKRIKQ 227
RKP C ++C +++LC ++
Sbjct: 207 PRKPSCLMTPEACPVADLCVARRE 230
>gi|254557851|ref|YP_003064268.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum JDM1]
gi|308181930|ref|YP_003926058.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|254046778|gb|ACT63571.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum JDM1]
gi|308047421|gb|ADN99964.1| A/G-specific adenine glycosylase (putative) [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 366
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 9/201 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ + +L + + + + V+ ++ Q+ V + +
Sbjct: 4 WDAATIKDFQTTLLDWFDHEGRDLPWRHDHEPYHVWVSEIMLQQTQVQTVIPYYQRFMAL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + A E +L +G Y + N+ + L+ ++D + PQT LT L GI
Sbjct: 64 FPTVADLAAAPESQLLKAWEGLGYYS-RVRNMQRCAKQLLTDYDGQWPQTAAELTELIGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + +R+ +R +A +T E+ + +II +
Sbjct: 123 GPYTAGAIASIAFNEPVPAVDGNAYRVFSRLLKIDADIAKPQTRAVFERVISQIISQERP 182
Query: 192 YNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G AR+P
Sbjct: 183 GDFNQAIMDLGSSYMTARQPD 203
>gi|188591115|ref|YP_001795715.1| adenine DNA glycosylase [Cupriavidus taiwanensis LMG 19424]
gi|170938009|emb|CAP62993.1| adenine DNA glycosylase [Cupriavidus taiwanensis LMG 19424]
Length = 391
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 83/237 (35%), Gaps = 18/237 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQ 60
+S K + P P + + ++ + + + ++ ++ Q
Sbjct: 1 MSRKPAPRTAPALPDDLCVPPDFGARVVD-WQRRYGRHDLPWQNTRDPYRIWLSEIMLQQ 59
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V + T Q + A ++ +G Y ++ N+ + +++E
Sbjct: 60 TQVSAVIDYFQRFVAQLPTVQALAAAPADQVMALWAGLGYYS-RARNLHRCAMQVVSEHG 118
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVE 179
+ P L LPGIGR A I + + G+ +D ++ R+ R G VE
Sbjct: 119 GRFPTDPAVLVTLPGIGRSTAAAIAAFSAGVRVPILDGNVKRVFARCFGIHGHPGERAVE 178
Query: 180 QSLLRI----IPP------KHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLC 222
+ ++ +P + L+ G VC KP C +C +S C
Sbjct: 179 TRMWQLAELALPAPGPRESEDMVAYTQGLMDLGATVCSRGKPACLADAAACPLSADC 235
>gi|307185012|gb|EFN71241.1| Endonuclease III-like protein 1 [Camponotus floridanus]
Length = 349
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A++LS+Q+ D + A + L P + A + L I +G +++K E I
Sbjct: 160 YQSLIALMLSSQTKDQVTHAAMQRLNTYGCKPDIIAATPDDVLGKLIYPVGFWKRKVEYI 219
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL++++D IP+T++ L LPG+G K ++ + +A+G + VDTH+ RI NR+
Sbjct: 220 KKTSVILLDKYDGDIPKTIKELCELPGVGPKMGHICMQIAWGEVSGIGVDTHVHRICNRL 279
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P KTP + L +P +Y LV G+ +C R P+C C+ N+C
Sbjct: 280 EWMKKPTKTPEETRNELEDWLPKSLWSKINYLLVGFGQEICLPRFPKCDECLNKNICPY 338
>gi|258544407|ref|ZP_05704641.1| A/G-specific adenine glycosylase [Cardiobacterium hominis ATCC
15826]
gi|258520366|gb|EEV89225.1| A/G-specific adenine glycosylase [Cardiobacterium hominis ATCC
15826]
Length = 341
Score = 93.1 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 8/206 (3%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + + + ++ ++ Q+ V + + A +
Sbjct: 8 LAAWQARHGRNHLPWQSDDPYRVWLSEIMLQQTQVATVLQYYPRFLARFPDVASLAAAAD 67
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G Y ++ N+ + ++ E + P+ GL L G+GR A I A
Sbjct: 68 DDVLALWSGLGYYS-RARNLHHAARQIMGEHGGQFPRDRAGLETLKGVGRSTAAAIAVFA 126
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPK--HQYNAHYWLVLH 201
+G +D ++ R+ R G T + +P L+
Sbjct: 127 YGQKEAILDGNVKRLLARHAGIYGATDQPATLAALWHEAEARLPDDPATLRRYTQGLMDL 186
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C +P C +C ++ C ++
Sbjct: 187 GNSICTRSRPHCDACPVAADCYAYRR 212
>gi|297527052|ref|YP_003669076.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylothermus
hellenicus DSM 12710]
gi|297255968|gb|ADI32177.1| DNA-(apurinic or apyrimidinic site) lyase [Staphylothermus
hellenicus DSM 12710]
Length = 234
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNH-----FTLIVAVLLSAQSTDVNVNKATKHLFEIA--D 78
EEI + + E N F I+ V+LS ++D N +A +L +I
Sbjct: 7 EEIINILRKHYKLNLKEFIAPNIRDKSLFEYIIGVMLSQNTSDKNAIRAYFNLKKIYGEI 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI----------PQTLE 128
TP K+L+ KL ++ G+Y ++++ II L+ I + + + +
Sbjct: 67 TPDKILSTPIDKLIEALKPAGMYNQRAQRIIELAKIFTEKNVEEELGKLIEEGKLREARK 126
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+G K A+V+L M +G P VDTHI R++ R+G + ++ + P
Sbjct: 127 YLVSLPGVGLKTADVVLLMYYGQPVFPVDTHIRRVTKRLGYIGKDDYEAISSWWMKQLKP 186
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H L+ HGR CKARKP C C I CK
Sbjct: 187 NDYLETHLLLITHGRKTCKARKPLCNICPIRKYCKYY 223
>gi|126643439|ref|YP_001086423.1| A/G specific adenine glycosylase [Acinetobacter baumannii ATCC
17978]
Length = 317
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 8/176 (4%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + E T + + ++ Y +G Y + + +
Sbjct: 1 MLQQTQVKTVLQYFDRFMERFPTVEALGYATWDEVAPYWAGLGYYARARNLHKAAGLVAQ 60
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-----LAP 171
P+TLE LPGIGR A ++S+ + +D ++ R+ R L+
Sbjct: 61 QGKF---PETLEEWIALPGIGRSTAGALMSLGLRQYGVIMDGNVKRVLARFFAIEDDLSK 117
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ + + P + ++ ++ G +C +KP C C + C+ +Q
Sbjct: 118 PQHEREMWKLAEELCPTQRNHDYTQAIMDLGATICTPKKPLCLYCPMQAHCQAYQQ 173
>gi|74318148|ref|YP_315888.1| A/G-specific DNA-adenine glycosylase [Thiobacillus denitrificans
ATCC 25259]
gi|74057643|gb|AAZ98083.1| A/G-specific adenine glycosylase MutY [Thiobacillus denitrificans
ATCC 25259]
Length = 344
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 9/191 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V + A E ++
Sbjct: 17 RHSLPWQATRDPYRIWLSEIMLQQTQVATVIPYYARFVARFPDLPALAAAHEDEVLALWS 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + + +++E P E + RLPGIGR A I ++AFG +
Sbjct: 77 GLGYYS-RARNLYAAARTVLDEHAGIFPDVPETIARLPGIGRSTAAAIAALAFGRACAIL 135
Query: 157 DTHIFRISNRIGLAPGKTPN-KVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R G KVE +L ++ +P ++ G VC P
Sbjct: 136 DGNVKRVLARHAGINGWPGERKVELALWQLAASRLPQAGVETYTQGMMDLGALVCTRGVP 195
Query: 212 QCQSCIISNLC 222
C C +S+ C
Sbjct: 196 ACVRCPVSDDC 206
>gi|189424391|ref|YP_001951568.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
gi|189420650|gb|ACD95048.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
Length = 218
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 100/181 (55%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + F ++V+ ++S ++ D A+ LFE A +P+ M+ + ++ + I G YR K
Sbjct: 32 HRSAFHVLVSCIISLRTKDAVTAAASARLFERAASPEAMICLTPSEIADLIYPAGFYRTK 91
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+E I ++ L+ E++ +P LE L RL G+GRK AN+++++ I VD H+ RI+
Sbjct: 92 AEQIHAICRTLLTEYNGSVPDNLEQLLRLKGVGRKTANLVMTLGHDKQGICVDIHVHRIT 151
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
NR G +P++ EQ L +P ++ + LV +G+ +C P C C + + C R
Sbjct: 152 NRWGYVNSGSPDETEQFLREKLPAEYWKKINDLLVCYGQNLCYPVSPACSRCRLLDCCSR 211
Query: 225 I 225
+
Sbjct: 212 V 212
>gi|296415754|ref|XP_002837551.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633423|emb|CAZ81742.1| unnamed protein product [Tuber melanosporum]
Length = 459
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 22 PKELEEIFYLFSLKWPSPKGELY----------YVNH----FTLIVAVLLSAQSTDVNVN 67
P+ EE++ K + F +++++LS+Q+ D
Sbjct: 158 PENWEEVYEKLREMRKKVKAPVDTMGCERLGDKAATPKLRRFHTLISLMLSSQTKDTINA 217
Query: 68 KATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
A K L E + +I E + L IR +G + +K+E I + I+ ++ IP
Sbjct: 218 VAMKGLREQLPGGLCLESILEVEPKRLDELIRIVGFHNRKTEYIKKAAVIIRDKHGGDIP 277
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLL 183
T EGLT LPG+G K A++ LS A+ VD H+ RI N TP ++L
Sbjct: 278 DTFEGLTALPGVGPKMAHLCLSAAWDRTEGIGVDVHVHRICNLWDWVKTTTPEGTREALQ 337
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN-LC 222
+P ++ LV G+ +C R +C C +S+ LC
Sbjct: 338 AWLPRDKWREINFLLVGFGQTICLPRGRKCGECALSSGLC 377
>gi|187922597|ref|YP_001894239.1| A/G-specific adenine glycosylase [Burkholderia phytofirmans PsJN]
gi|187713791|gb|ACD15015.1| A/G-specific adenine glycosylase [Burkholderia phytofirmans PsJN]
Length = 353
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V T + A +
Sbjct: 17 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPTVAALAAAPSDDVMALWA 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++I + P ++E L LPGIGR A I S AFG +
Sbjct: 77 GLGYYT-RARNLHRCAQVVIEQHGGAFPASVEELAELPGIGRSTAAAIASFAFGARATIL 135
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G KVE ++ ++P L+ G +C
Sbjct: 136 DGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDADVSAYTQGLMDLGATLCV 195
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 196 RGKPDCLRCPFAADC 210
>gi|317010420|gb|ADU84167.1| DNA glycosylase MutY [Helicobacter pylori SouthAfrica7]
Length = 328
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ V + F A
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E +++P + L +LPGIG
Sbjct: 61 FPTLKDLANAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F T VD ++ R+ GL P ++ + P +N +
Sbjct: 121 AYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNPNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 181 ALIDLGALICSP-KPKCAICPFNPYC 205
>gi|118594271|ref|ZP_01551618.1| A/G-specific adenine glycosylase [Methylophilales bacterium
HTCC2181]
gi|118440049|gb|EAV46676.1| A/G-specific adenine glycosylase [Methylophilales bacterium
HTCC2181]
Length = 343
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ +V + + T +K+ + +
Sbjct: 17 RHDLPWQKINDPYLIWISEIMLQQTQVSSVIPYYQRFIKTFPTVEKLAFADHDVVMKHWS 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G YR +++ I+ + I++ ++ +K P ++E L LPGIG+ A I + AFG +
Sbjct: 77 GLGYYR-RAKFIMQTAKIIVQQYQSKFPDSVEKLLSLPGIGKSTAGAICAFAFGGIEPIM 135
Query: 157 DTHIFRISNRIGLAPGKTPN-KVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R + ++ L + +P + L+ G +CK +P
Sbjct: 136 DANVKRVFCRFYGIMEWPGKAQTQKYLWSLAEQNLPSNNIQIYTQALMDLGATLCKGSQP 195
Query: 212 QCQSCIISNLCKRIK 226
C C + C K
Sbjct: 196 VCSQCPLQLKCVSFK 210
>gi|300769265|ref|ZP_07079152.1| A/G-specific adenine glycosylase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300493039|gb|EFK28220.1| A/G-specific adenine glycosylase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 366
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 9/201 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ +++ + +L + + + + V+ ++ Q+ V + +
Sbjct: 4 WDAATIKDFQTTLLDWFDHEGRDLPWRHDHEPYHVWVSEIMLQQTQVQTVIPYYQRFMAL 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + A E +L +G Y + N+ + L+ ++D + PQT LT L GI
Sbjct: 64 FPTVADLAAAPESQLLKAWEGLGYYS-RVRNMQRCAKQLLTDYDAQWPQTAAELTELIGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQ 191
G A I S+AF P VD + +R+ +R +A +T E+ + +II +
Sbjct: 123 GPYTAGAIASIAFNEPVPAVDGNAYRVFSRLLKIDADIAKPQTRAVFERVISQIISQERP 182
Query: 192 YNAHYWLVLHGRYVCKARKPQ 212
+ + ++ G AR+P
Sbjct: 183 GDFNQAIMDLGSSYMTARQPD 203
>gi|222110044|ref|YP_002552308.1| a/g-specific adenine glycosylase [Acidovorax ebreus TPSY]
gi|221729488|gb|ACM32308.1| A/G-specific adenine glycosylase [Acidovorax ebreus TPSY]
Length = 357
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 11/202 (5%)
Query: 31 LFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + + ++ ++ Q+ V + +++ A +
Sbjct: 14 RWQAAHGRNHLPWQNTRDAYRVWLSEIMLQQTQVATVLEYYTRFLARFPDVRQLAAAPQD 73
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G Y ++ N+ + I++++ + P+T++ L LPGIGR A I + F
Sbjct: 74 EVLALWSGLGYYS-RARNLHRCAQIVVHQHGGEFPRTVDELAALPGIGRSTAGAIAAFCF 132
Query: 150 GIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVL 200
G+ +D ++ R+ R+ LA K + Q ++P + + L+
Sbjct: 133 GVRAPILDANVRRVLTRVLGFGADLAEAKNERALWQQAEALLPRQDLSHAMPRYTQGLMD 192
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G +C R P C C + C
Sbjct: 193 LGAGICLPRNPNCLLCPLQEAC 214
>gi|147919100|ref|YP_687169.1| endonuclease III [uncultured methanogenic archaeon RC-I]
gi|110622565|emb|CAJ37843.1| predicted endonuclease III [uncultured methanogenic archaeon RC-I]
Length = 243
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ EI ++ + + F +++ +LS +TD N +A +L+E+ TP+++
Sbjct: 8 KTAEISRRLIARYG--RYDESRGKPFDVLIMTILSQNTTDRNSLRAFANLYEVYHTPEQL 65
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSH--------ILINEFDNKIPQTLEGLTRLPG 135
+ E + + IR G++ +K++ I ++S L + + L + G
Sbjct: 66 ASAPESAIADLIRIGGLHEQKAKLIKNISQLVIDEYDGTLDFVCETDPEVARKELLTIKG 125
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNA 194
+G K A+ +L + I VDTH+FRI+ R+G+ P K K Q L+ +P + +
Sbjct: 126 VGPKTADCVLLFSCDRDVIPVDTHVFRITKRLGIVPEKADHEKARQILMEKVPEGLRGST 185
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H L+ GR +CKA+ P+ C + +LC +Q
Sbjct: 186 HVALIKFGREICKAQNPRHDQCFLLDLCDYARQ 218
>gi|326803110|ref|YP_004320928.1| A/G-specific adenine glycosylase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650228|gb|AEA00411.1| A/G-specific adenine glycosylase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 404
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 9/204 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + L + + + + ++ ++ Q+ V + + T +
Sbjct: 38 QAFRKTLFDWYDKEGRHLPWRESKDPYRIWISEIMLQQTQVNTVIPYYQRFLQAFPTVED 97
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A E L +G Y +++N+ + ++N++ + PQT + L +L GIG A
Sbjct: 98 LAAAEEDDLLKLWAGLGYYS-RAKNLHKAAQEIVNDYGGQFPQTAKELKQLSGIGPYTAG 156
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP-----PKHQYNAHYW 197
I S+AFG +D + R+ +R+ + ++ R + + + +
Sbjct: 157 AIASIAFGQAVPAIDGNAMRVFSRLFTINADISRQKNHAIFREVVAYVMGDERPGDFNQA 216
Query: 198 LVLHGRYVCKARKPQCQSCIISNL 221
L+ G A+KP I +
Sbjct: 217 LMDLGSSYETAKKPLSDISPIKDF 240
>gi|238020934|ref|ZP_04601360.1| hypothetical protein GCWU000324_00831 [Kingella oralis ATCC 51147]
gi|237867914|gb|EEP68920.1| hypothetical protein GCWU000324_00831 [Kingella oralis ATCC 51147]
Length = 348
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 8/204 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + + + + ++ ++ Q+ V T Q + A + +
Sbjct: 10 RWQRQHGRNSLPWQTRDPYRVWLSEIMLQQTQVATVLDYYPRFLAAFPTVQALAAASQDQ 69
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y ++ N+ + + ++ + P T L L G+GR A I + A+
Sbjct: 70 VLSLWAGLGYYS-RARNLHAAAQQIVQQHSGAFPPTRAELETLKGVGRSTAAAIAAFAYH 128
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRI---IPPKHQYN---AHYWLVLHGR 203
+D ++ R+ R+ G NK E+ L + + P + L+ G
Sbjct: 129 QREAILDGNVKRVLCRVFAQDGDPANKAFERQLWALAESLLPSQPGDMPAYTQGLMDLGA 188
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C + +LC+ Q
Sbjct: 189 TLCTRSKPRCTECPMQSLCQAHAQ 212
>gi|205355634|ref|ZP_03222404.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205346411|gb|EDZ33044.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 339
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC + +C C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALVCVGKNAKCGICPLYDFCQ 220
>gi|283957004|ref|ZP_06374476.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791505|gb|EFC30302.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 1336]
Length = 361
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 23 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 82
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 83 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 141
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 142 LPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFTLENPSMKELEKRA 201
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC + +C C + + C+
Sbjct: 202 KELLNLNHAFDHNQALLDIGALVCVGKNAKCGICPLYDFCQ 242
>gi|329903037|ref|ZP_08273349.1| A/G-specific adenine glycosylase [Oxalobacteraceae bacterium
IMCC9480]
gi|327548515|gb|EGF33181.1| A/G-specific adenine glycosylase [Oxalobacteraceae bacterium
IMCC9480]
Length = 384
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 9/191 (4%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V + + +++ ++
Sbjct: 32 RHALPWQNTRDAYRIWLSEIMLQQTQVTAVIPYYQKFLLSFPDVAALAGATSEQVMSHWS 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ E P E L LPGIGR A I + A+G +
Sbjct: 92 GLGYYT-RARNLHQCAKRVVAEHGGLFPSDPELLADLPGIGRSTAAAISAFAYGTRAAIL 150
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGRYVCKARKP 211
D ++ R+ R+ G +K VE L R ++P + L+ G +C +P
Sbjct: 151 DGNVKRVFTRVFGVDGYPGSKPVEDQLWRRAVDLLPQEGIERYTQGLMDLGATLCTRSRP 210
Query: 212 QCQSCIISNLC 222
C C ++ C
Sbjct: 211 DCARCPLAVRC 221
>gi|309360426|emb|CAP31300.2| CBR-NTH-1 protein [Caenorhabditis briggsae AF16]
Length = 289
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + Q + A L+ + +G Y++K+ I
Sbjct: 77 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIQTIRAFPVSDLEKILCPVGFYKRKAVYI 136
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL + + IP TL+GL LPG+G K AN+++ +A+G I VDTH+ RISNR+
Sbjct: 137 QQTAKILEDSYSGDIPDTLDGLCSLPGVGPKMANLVMQIAWGKCEGIAVDTHVHRISNRL 196
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G TP K +++L ++P ++ LV G+ +C+ +P+C +C+ C
Sbjct: 197 GWIKTTTPEKTQKALESLLPRSEWQPINHLLVGFGQMLCQPVRPKCATCLCRLTCPS 253
>gi|241764078|ref|ZP_04762116.1| A/G-specific adenine glycosylase [Acidovorax delafieldii 2AN]
gi|241366609|gb|EER61090.1| A/G-specific adenine glycosylase [Acidovorax delafieldii 2AN]
Length = 360
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 11/202 (5%)
Query: 31 LFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + + ++ ++ Q+ V E + + +
Sbjct: 14 RWQEAHGRNHLPWQQTRDPYRVWLSEIMLQQTQVSTVLGYYARFLERFPDVRALAEASQD 73
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G Y ++ N+ + +++++ P + E L LPGIGR A + + F
Sbjct: 74 DVMALWSGLGYYS-RARNLHRCAQVVVSDHGGAFPSSAEVLATLPGIGRSTAGAVAAFCF 132
Query: 150 GIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIP----PKHQYNAHYWLVL 200
T +D ++ R+ R+ LA K + ++P L+
Sbjct: 133 AERTPILDANVRRVLTRVLGFDADLAQAKNERALWGHAQALLPVTDIESAMPRYTQGLMD 192
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G +C R P C C + C
Sbjct: 193 LGAGLCLPRNPDCGGCPLQEGC 214
>gi|195999308|ref|XP_002109522.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
gi|190587646|gb|EDV27688.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
Length = 292
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A L T ++A +K+L I +G +++K + I
Sbjct: 109 YQILISLMLSSQTKDQITAAAMHRLKNHGLTMDNVMATSDKQLGELIFPVGFWQRKVQYI 168
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ +LI +++ IP TL+ L LPGIG K A++I+ + IGVDTH+ RISNR+
Sbjct: 169 KRTTAMLIEKYNKDIPPTLDELKALPGIGPKMAHLIMLSAWNSVVGIGVDTHVHRISNRL 228
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P P K +L +P + +V G+ +C P C +C+ +C
Sbjct: 229 KWVKKPTTDPEKTRIALEEWLPRNEWREINCLMVGFGQTICLPINPLCDNCLNKPICPYG 288
Query: 226 KQ 227
K+
Sbjct: 289 KR 290
>gi|167579768|ref|ZP_02372642.1| A/G-specific adenine glycosylase [Burkholderia thailandensis TXDOH]
Length = 368
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPAAPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK----HQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G K VE + + +P L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGEKRVENEMWALAEALLPDAAGQADVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 212 RGKPDCARCPFAGDC 226
>gi|83721272|ref|YP_441037.1| A/G-specific adenine glycosylase [Burkholderia thailandensis E264]
gi|167617844|ref|ZP_02386475.1| A/G-specific adenine glycosylase [Burkholderia thailandensis Bt4]
gi|257140310|ref|ZP_05588572.1| A/G-specific adenine glycosylase [Burkholderia thailandensis E264]
gi|83655097|gb|ABC39160.1| A/G-specific adenine glycosylase [Burkholderia thailandensis E264]
Length = 368
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPAAPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK----HQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G K VE + + +P L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGEKRVENEMWALAEALLPDAAGQADVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 212 RGKPDCARCPFAGDC 226
>gi|120612251|ref|YP_971929.1| A/G-specific DNA-adenine glycosylase [Acidovorax citrulli AAC00-1]
gi|120590715|gb|ABM34155.1| A/G-specific DNA-adenine glycosylase [Acidovorax citrulli AAC00-1]
Length = 363
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 10/186 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V E + + A E + +G Y ++
Sbjct: 30 RDPYRVWLSEIMLQQTQVNTVLDYYTRFLERFPDVRALAAAPEDDVMALWSGLGYYS-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ + + P++ E L LPGIGR A I S F +D ++ R+
Sbjct: 89 RNLHRCAREVVDRYGGEFPRSAEALAGLPGIGRSTAGAIASFCFAERVPILDANVRRVLT 148
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + + ++P L+ G +C RKP C C
Sbjct: 149 RVLGFDADLAVARNERDLWDRASELLPHDDLQEAMPRYTQGLMDLGASLCTPRKPACILC 208
Query: 217 IISNLC 222
+ C
Sbjct: 209 PLQPQC 214
>gi|152991607|ref|YP_001357328.1| A/G-specific adenine glycosylase [Sulfurovum sp. NBC37-1]
gi|151423468|dbj|BAF70971.1| A/G-specific adenine glycosylase [Sulfurovum sp. NBC37-1]
Length = 326
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 84/205 (40%), Gaps = 12/205 (5%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNV-NKATKHLFEIAD 78
KE+ + + + + +L + N + + ++ ++ Q+ V + +
Sbjct: 12 KEIHQKIRTWYEAYG--RHDLPWRSTNNPYHIYLSEVMLQQTQVKTVLERYYFPFLQAFS 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + + +G Y + + + N++P ++ L +LPGIG+
Sbjct: 70 SLEALGNAPLDDVLKQWEGLGYYNRAKNLHRTAGLV------NELPPEIDELVKLPGIGK 123
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
A+ I + AF P ++ ++ RI R+ K+ + + + +N + +
Sbjct: 124 NTAHAIAAFAFHQPVPVMEANVKRILCRMHRLRTPNEKKLWKFAYASVDKEDPFNYNQAM 183
Query: 199 VLHGRYVCKARKPQCQSCIISNLCK 223
+ G +C + PQC C + N+CK
Sbjct: 184 MDIGATLCLPKNPQCNRCPLENICK 208
>gi|300172619|ref|YP_003771784.1| A/G-specific adenine glycosylase [Leuconostoc gasicomitatum LMG
18811]
gi|299886997|emb|CBL90965.1| A/G-specific adenine glycosylase [Leuconostoc gasicomitatum LMG
18811]
Length = 340
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 85/212 (40%), Gaps = 10/212 (4%)
Query: 19 LYTPKELEEIFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+++ + +++ + + L + + ++V+ ++ Q+ V +
Sbjct: 3 IWSEQTIKDFRRTLLDWYNQEGRANLPWRVNHEPYRVLVSEIMLQQTQVDTVLPYYERFM 62
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
T Q + E ++ +G Y ++ N+ + ++ E P++ + L LP
Sbjct: 63 SDLPTVQDLAYAPEAQVLKLWEGLGYYS-RARNLQKAAKFIVEELHGHWPESSDDLQELP 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPK 189
G+G + I S++F VD + +R+ +R +A K+ + ++L I+ P
Sbjct: 122 GVGPYTSAAIASISFDEVVPAVDGNAYRVFSRLLKIDADIANTKSRHIFYDAILPIVDPV 181
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
H + + ++ G A+ P + +
Sbjct: 182 HPGDFNQAIMDLGSSYMTAKNPDSSHSPVRSF 213
>gi|124514281|gb|EAY55795.1| putative endonuclease III [Leptospirillum rubarum]
Length = 210
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 97/179 (54%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ +++ +LS ++ D A++ LFE A + + +++ I +G YR K++
Sbjct: 27 PYDVLIMTILSLRTKDSVTIPASQRLFEKAPDLPSLSQMKISDIESLIFPVGFYRTKAKT 86
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
I +++ ++ EF KIP TLEGL LPG+G K AN++L++ F VD H+ RI NR
Sbjct: 87 IKTIAERVLTEFGGKIPDTLEGLLSLPGVGLKTANLVLTVGFEKEGFCVDIHVHRILNRW 146
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G+ +P++ + ++P K + A+ LV G++ C+ P C C + C RI+
Sbjct: 147 GVIQTHSPDETYHIVEPVLPRKWKRRANALLVAFGQHFCRPVSPFCSVCPLLPDCNRIE 205
>gi|226226230|ref|YP_002760336.1| putative adenine glycosylase [Gemmatimonas aurantiaca T-27]
gi|226089421|dbj|BAH37866.1| putative adenine glycosylase [Gemmatimonas aurantiaca T-27]
Length = 221
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 73/188 (38%), Gaps = 10/188 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++++ L+ Q+ V + + + ++ +G Y ++
Sbjct: 30 RDPYRILISELMLQQTQVSRVLDFYARFLDRFPDLPALASARPARVMEAWAGLGYYA-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ L+ + + IP L LPGIG A + S A+ VDT++ R+ +
Sbjct: 89 RNLHKLAREVTTDRAGVIPHDPVELRTLPGIGAYTAGAVASFAYEKRAALVDTNVARVLH 148
Query: 166 RIGLAP-----GKTPNKVEQSLLRIIP---PKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
R+ G ++ + ++P + + ++ G VC AR P+C C
Sbjct: 149 RVFAPDAAPKSGPGLKRLWRIAEDVLPRTGKATWLH-NQAIMELGALVCTARSPKCGQCP 207
Query: 218 ISNLCKRI 225
+ C +
Sbjct: 208 VRQGCASV 215
>gi|113205550|ref|NP_001037884.1| nth endonuclease III-like 1 [Xenopus (Silurana) tropicalis]
gi|89267879|emb|CAJ83279.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
gi|166796488|gb|AAI59396.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
Length = 300
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D + A L + T ++L + L I +G ++ K + I
Sbjct: 115 YQILLSLMLSSQTKDQVTSAAMCRLRQHGLTVSRILETDDGTLGKLIYPVGFWKNKVKYI 174
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ IL ++ IP + L +LPG+G K A++++ + + IGVDTH+ RISNR+
Sbjct: 175 KQTTEILQEKYGGDIPDNVTDLVKLPGVGPKMAHLVMDIAWNNVSGIGVDTHVHRISNRL 234
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + ++ +P + ++ LV G+ VC P+C C+ ++C
Sbjct: 235 KWVRKETKTPEETRVAMEDWMPRELWSEINWLLVGFGQQVCLPVSPRCSECLNKDICPGA 294
Query: 226 KQ 227
K+
Sbjct: 295 KK 296
>gi|261749145|ref|YP_003256830.1| endonuclease III [Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
gi|261497237|gb|ACX83687.1| endonuclease III [Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
Length = 213
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+++ I + + +P+P LYY N FTL++A+LL+++S + VN+ TK LF+ PQ
Sbjct: 5 EKKIKIITDILNFIYPNPISSLYYTNEFTLLIAILLTSRSQEKKVNQITKLLFKTIQKPQ 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
++ + +QN+I+ IG+Y +KS NI LS LI ++D IP+++ L LPGIG K A
Sbjct: 65 DIIQLSVINIQNHIKHIGLYNRKSRNIYDLSITLIKKYDGIIPKSIFELESLPGIGHKTA 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+V LS P +DTHI R+ R L+ GK + E+ R K+ H ++ +
Sbjct: 125 SVFLSHVSKEPVFPIDTHIHRMMFRWELSNGKNIRQTEKDAKRFFSKKNWKKLHLQIISY 184
Query: 202 GRYVCKAR--KPQ 212
G+ +R P+
Sbjct: 185 GKEYSPSRGWNPK 197
>gi|126440431|ref|YP_001057627.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 668]
gi|126454675|ref|YP_001064873.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1106a]
gi|242317225|ref|ZP_04816241.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1106b]
gi|126219924|gb|ABN83430.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 668]
gi|126228317|gb|ABN91857.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1106a]
gi|242140464|gb|EES26866.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1106b]
Length = 368
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGDC 226
>gi|76808820|ref|YP_332172.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1710b]
gi|254260868|ref|ZP_04951922.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1710a]
gi|76578273|gb|ABA47748.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1710b]
gi|254219557|gb|EET08941.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1710a]
Length = 368
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGDC 226
>gi|261403295|ref|YP_003247519.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
gi|261370288|gb|ACX73037.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
Length = 346
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++V+ ++SA++ D + +K LF+ +L I E+KL N I G Y+ K+
Sbjct: 26 RDPFKVLVSTVISARTKDEITEEVSKKLFKEVKNVDDLLKIDEEKLANLIYPAGFYKNKA 85
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+ ++ IL E+ K+P +LE L +LPG+GRK AN++L++AF I VDTH+ RI N
Sbjct: 86 KNLKKMAKILKEEYGGKVPNSLEDLLKLPGVGRKTANLVLTLAFDKDGICVDTHVHRICN 145
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCK 223
R + +TP + E L + +P K+ + LV+ G+ +C KP+C+ C I + C
Sbjct: 146 RWEIVETETPEETEFELRKKLPKKYWKVINNLLVVFGKEICSP-KPKCEKCFYEIRDKCP 204
Query: 224 RIKQ 227
+
Sbjct: 205 YYAK 208
>gi|257388248|ref|YP_003178021.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
gi|257170555|gb|ACV48314.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
Length = 305
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 8/210 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P+ E + + + + + + ++V+ ++S Q+ V +A + +
Sbjct: 9 PENREAVQRALIEWYEADHRSFPWRETDDAYEILVSEVMSQQTQLGRVVEAWRAFLDRWP 68
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + A + + + + Y +++ + + ++ +I+E+D P+T L L G+G
Sbjct: 69 DAEALAATDQSDVVAFWTAHSLGYNNRAKYLHTAANQIIDEWDGAFPETPAELQELHGVG 128
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
AN + S AF VDT++ R+ +R P E+ ++P +
Sbjct: 129 PYTANAVASFAFNAGDAVVDTNVKRVLHRAFDVPDDD-AAFEEVAGALMPDGRSRIWNNA 187
Query: 198 LVLHGRYVCKARKPQCQS--CIISNLCKRI 225
++ G C + P C + C C
Sbjct: 188 IMELGGVAC-EKTPACDAAGCPWREWCHAY 216
>gi|217968884|ref|YP_002354118.1| A/G-specific adenine glycosylase [Thauera sp. MZ1T]
gi|217506211|gb|ACK53222.1| A/G-specific adenine glycosylase [Thauera sp. MZ1T]
Length = 359
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 10/201 (4%)
Query: 31 LFSLK-WPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + + A
Sbjct: 7 RLIEWQRKHGRHDLPWQGGHDPYRIWLSEIMLQQTRVETVIPYYERFLARFPDVAALAAA 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ + +G Y ++ N+ + ++++ P++ + LPGIGR A I +
Sbjct: 67 PVEDVMALWSGLGYYA-RARNLHRAARVVMDAHGGAFPRSAAAIAGLPGIGRSTAAAIAA 125
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRIIPPKHQYNAHYWLVLH 201
A+G +D ++ R+ R+ G +K ++P + +
Sbjct: 126 FAWGERAAILDGNVKRVLCRVFGIEGFPGDKAVETRLWALAESLLPERGIGRYIQAQMDL 185
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C +P C C + C
Sbjct: 186 GATLCTRARPACARCPFHDDC 206
>gi|89900444|ref|YP_522915.1| A/G-specific adenine glycosylase [Rhodoferax ferrireducens T118]
gi|89345181|gb|ABD69384.1| A/G-specific DNA-adenine glycosylase [Rhodoferax ferrireducens
T118]
Length = 344
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + + + A +
Sbjct: 18 RHDLPWQNTRDPYRVWLSEIMLQQTQVATVLDYFPRFLERFPSVESLAAAALDDVLGLWS 77
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P T + L LPGIGR A I S+ FG +
Sbjct: 78 GLGYYT-RARNLHLCAGAVMRLHGGLFPPTAQLLQTLPGIGRSTAAAIASLCFGERVAIL 136
Query: 157 DTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCK 207
D ++ R+ R LA ++ R++P + + L+ G VC
Sbjct: 137 DGNVKRVLTRVLGFDSDLASVANERRLWDEASRMLPLRDLTHAMPRYTQGLMDLGATVCT 196
Query: 208 ARKPQCQSCIISNLC 222
A+KP C C ++ C
Sbjct: 197 AKKPDCAVCPLARSC 211
>gi|86742935|ref|YP_483335.1| HhH-GPD [Frankia sp. CcI3]
gi|86569797|gb|ABD13606.1| HhH-GPD [Frankia sp. CcI3]
Length = 320
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 11/192 (5%)
Query: 41 GELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+L + + + ++V+ ++ Q+ V + + TP + A +
Sbjct: 48 RDLPWRRPLTSPWAIMVSEVMLQQTPVSRVLPVWEAWLDRWPTPAALAAEPAGEAVRAWG 107
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G R+ + + ++ D +IPQ L+ L LPGIG A + + AF V
Sbjct: 108 RLGYPRRALRLHQAATVVV-ERHDGEIPQHLDDLLALPGIGTYTARAVAAFAFRQRHPVV 166
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQ----SLLRIIPP--KHQYNAHYWLVLHGRYVCKARK 210
D ++ R+ R P V + + ++PP + A + G VC AR
Sbjct: 167 DVNVRRLFARAVEGRADPPATVSRRDLVEIAELLPPDTETAARASAAFMELGALVCVARA 226
Query: 211 PQCQSCIISNLC 222
P+C +C + C
Sbjct: 227 PRCAACPLLGRC 238
>gi|171060162|ref|YP_001792511.1| A/G-specific adenine glycosylase [Leptothrix cholodnii SP-6]
gi|170777607|gb|ACB35746.1| A/G-specific adenine glycosylase [Leptothrix cholodnii SP-6]
Length = 384
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 68/186 (36%), Gaps = 8/186 (4%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + + + A + +G Y ++
Sbjct: 34 RDPYRVWLSEVMLQQTQVATVLGYYERFLQRFPDIAALAAAPLDDVLALWSGLGYYS-RA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ E +P+ E L LPGIG A I S G D ++ R+
Sbjct: 93 RNLHRCAQVVVAEHGAALPRRAEQLVELPGIGPSTAAAIASFCHGERVSIFDGNVKRVLA 152
Query: 166 R-----IGLAPGKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R LA + R++P L+ G VC R PQC +C +
Sbjct: 153 RLLAFEGDLAQAGAAKVLWAQADRLVPTDAADMPAYTQGLMDLGATVCTPRDPQCPACPL 212
Query: 219 SNLCKR 224
C+
Sbjct: 213 QRACRA 218
>gi|323250243|gb|EGA34133.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
Length = 139
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 66/134 (49%), Positives = 98/134 (73%)
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
YI+TIG++ K+EN+I IL+++ + ++P+ L LPG+GRK ANV+L+ AFG PT
Sbjct: 3 YIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPT 62
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
I VDTHIFR+ NR APGK +VE+ LL+++P + + + H+WL+LHGRY C ARKP+C
Sbjct: 63 IAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLILHGRYTCIARKPRC 122
Query: 214 QSCIISNLCKRIKQ 227
SC+I +LC+ ++
Sbjct: 123 GSCLIEDLCEYKEK 136
>gi|62185498|ref|YP_220283.1| putative DNA repair protein [Chlamydophila abortus S26/3]
gi|62148565|emb|CAH64337.1| putative DNA repair protein [Chlamydophila abortus S26/3]
Length = 219
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + +P P+ L + F L+VA++LS STD VN T LF +A Q ++
Sbjct: 9 NFILSTLNELFPDPQPSLTGWETPFQLLVAIVLSGNSTDKAVNAVTPRLFSLAPDAQALV 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + L I G+ R+K+ + L+ IL+ ++ + P +LE LT+LPG+GRK A+V
Sbjct: 69 QLPLEDLYFIISPCGLGRRKAAYLHHLAQILLEKYHGEPPASLELLTQLPGVGRKTASVF 128
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + + IPT VDTHI R+S R G++ ++P+ E+ L+ + H L+ + R
Sbjct: 129 LGIIYKIPTFPVDTHILRLSQRWGISNKRSPSAAEKDLVLFFGEANSPKLHLQLIYYARE 188
Query: 205 VCKARKPQCQSCIISNL 221
C A C I
Sbjct: 189 YCPALYHDTNKCKICAY 205
>gi|167844243|ref|ZP_02469751.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei B7210]
Length = 289
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGDC 226
>gi|227547928|ref|ZP_03977977.1| A/G-specific DNA glycosylase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079939|gb|EEI17902.1| A/G-specific DNA glycosylase [Corynebacterium lipophiloflavum DSM
44291]
Length = 295
Score = 92.3 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 7/188 (3%)
Query: 41 GELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+L + + + ++++ ++S Q+ V + TP A ++
Sbjct: 24 RDLPWRRAGTSAWGVLLSEVMSHQTPVARVAPIWQEWIRRWPTPADFAAASGDEVLRAWG 83
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
++G R+ + + I++ + ++P+ ++ L LPGIG A + A+G V
Sbjct: 84 SLGYPRRALRLL-DCARIIVADHGGEVPRDVDTLLSLPGIGAYTARAVACFAYGANVAVV 142
Query: 157 DTHIFRISNRIGLAPG-KTPNKVE-QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
DT++ R+ R P E + ++P + L+ G VC A P+C
Sbjct: 143 DTNVRRVYARAVEGRFLAQPRAGEIADVAALLPAQDGPVFSAGLMELGALVCTATNPECG 202
Query: 215 SCIISNLC 222
SC + C
Sbjct: 203 SCPLERQC 210
>gi|121593323|ref|YP_985219.1| A/G-specific DNA-adenine glycosylase [Acidovorax sp. JS42]
gi|120605403|gb|ABM41143.1| A/G-specific DNA-adenine glycosylase [Acidovorax sp. JS42]
Length = 357
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 11/202 (5%)
Query: 31 LFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + + ++ ++ Q+ V + +++ A +
Sbjct: 14 RWQAAHGRNHLPWQNTRDAYRVWLSEIMLQQTQVATVLEYYARFLARFPDVRQLAAAAQD 73
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G Y ++ N+ + I++++ + P+T++ L LPGIGR A I + F
Sbjct: 74 EVLALWSGLGYYS-RARNLHRCAQIVVHQHGGEFPRTVDELAALPGIGRSTAGAIAAFCF 132
Query: 150 GIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVL 200
G+ +D ++ R+ R+ LA K + Q ++P + + L+
Sbjct: 133 GVRAPILDANVRRVLTRVLGFGADLAEAKNERALWQQAEALLPRQDLSHAMPRYTQGLMD 192
Query: 201 HGRYVCKARKPQCQSCIISNLC 222
G +C R P C C + C
Sbjct: 193 LGAGICLPRNPNCLLCPLQEAC 214
>gi|332028140|gb|EGI68191.1| Endonuclease III-like protein 1 [Acromyrmex echinatior]
Length = 341
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +VA++LS+Q+ D + A + L P + A + L I +G ++KK E I
Sbjct: 154 YQSLVALMLSSQTKDQVTHAAMQRLNTYGCKPNIIAATPDDVLGKLIYPVGFWKKKVEYI 213
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL++++ IP+T++ L LPG+G K A++ + A+G + VDTH+ RI+NR+
Sbjct: 214 KKTSVILLDKYGGDIPKTVKELCELPGVGPKMAHLCMRTAWGEVSGIGVDTHVHRIANRL 273
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G KTP + L +P ++ LV G+ C R P+C C+ N+C
Sbjct: 274 GWVKKLTKTPEQTRNELEDWLPKPLWSEVNHLLVGFGQETCLPRFPKCSECLNKNICPFA 333
Query: 226 KQ 227
+
Sbjct: 334 SK 335
>gi|17554540|ref|NP_497859.1| NTH (eNdonuclease THree like) homolog family member (nth-1)
[Caenorhabditis elegans]
gi|1706649|sp|P54137|NTH1_CAEEL RecName: Full=Probable endonuclease III homolog; AltName:
Full=DNA-(Apurinic or apyrimidinic site) lyase
Length = 259
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + K+L L+ + +G Y++K+ +
Sbjct: 29 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYL 88
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL ++F IP +L+GL LPG+G K AN+++ +A+G I VDTH+ RISNR+
Sbjct: 89 QKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRL 148
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G TP K +++L ++P ++ LV G+ C+ +P+C +C+ C
Sbjct: 149 GWIKTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPS 205
>gi|283783615|ref|YP_003374369.1| putative A/G-specific adenine glycosylase [Gardnerella vaginalis
409-05]
gi|283442180|gb|ADB14646.1| putative A/G-specific adenine glycosylase [Gardnerella vaginalis
409-05]
Length = 331
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 27/210 (12%)
Query: 41 GELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+L + + ++V ++S Q+ V + Q + ++
Sbjct: 41 RDLPWRFGRTTPWGVLVCEVMSQQTQMSRVVPYWLTWMQTWPDAQSLAHATSAEIITAWG 100
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G R+ + S + ++ + NK+P T E L LPG+G A+ ILS A+G +
Sbjct: 101 RLGYPRRALR-LQSCAQVVATRYRNKLPCTYEELIALPGVGDYTASAILSFAYGKHIAVI 159
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH------------------QYNA 194
DT+I R+ R QS + +P +
Sbjct: 160 DTNIRRVLMRAFTGTESHGGSTTQSDRELAAAVLPEDNHVTAATANATNTTNTTCTSSVW 219
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ G +C AR PQC +C + C+
Sbjct: 220 NQAIMEIGATICTARSPQCTACPLQTWCRF 249
>gi|117923550|ref|YP_864167.1| A/G-specific DNA-adenine glycosylase [Magnetococcus sp. MC-1]
gi|117607306|gb|ABK42761.1| A/G-specific DNA-adenine glycosylase [Magnetococcus sp. MC-1]
Length = 365
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 75/201 (37%), Gaps = 9/201 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + + ++ A
Sbjct: 12 QRLLAYYDEYGRDLPWRQQQDLYRIWLSEIMLQQTGVKTVMPYYEKFLSHFPSITQLAAA 71
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++++ + +G YR ++ + + ++ + P+ + + LPGIG A IL+
Sbjct: 72 SQEQVLAQWQGLGYYR-RARMLHQAAQQVVQQHGGLFPEEITQVQALPGIGPSTAAAILA 130
Query: 147 MAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ +D ++ R+ R+ + ++ Q ++ + + ++
Sbjct: 131 IGRNQAHTILDGNVMRVLARLLTLELPVDSTPGKQRLWQVARQLTSQQRPGDYAQAIMDL 190
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G +C +P C C C
Sbjct: 191 GATLCTRSQPACSRCPWGGAC 211
>gi|325193803|emb|CCA28012.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 319
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 36/259 (13%)
Query: 5 KKSDSYQGNSPLGCLYTPK----------------ELEEIFYLFSLKWPSPKGELYYVNH 48
KK + SP L + ++ E+ + E +Y
Sbjct: 57 KKRKILKVESPSSKLQSKDEEILATPNVNWNEMLLKIREMRATMKAEVDEDGSETFYDTK 116
Query: 49 -------FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
F ++++ +LS+Q+ D A + L + T + M+ I E KL I + Y
Sbjct: 117 HPAHVARFHVLISAMLSSQTKDPINAAAMRRLLDNELTVESMIKIKEDKLAQIIYPVSFY 176
Query: 102 RKKSENIISLSHILINEF----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGV 156
R K+++I ++ IL IP+T+E L LPG+G K A +++++A+ P I V
Sbjct: 177 RNKAKSIKKVASILKERESEDGICDIPETVENLVALPGVGPKMAYLVMNVAWNKPVGICV 236
Query: 157 DTHIFRISNRIGLAPGKT--------PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
DTH+ RI NR+G P K + L +P +H + + LV G+ +C A
Sbjct: 237 DTHVHRICNRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQTICHA 296
Query: 209 RKPQCQSCIISNLCKRIKQ 227
R+P+C+ C + ++C +
Sbjct: 297 RQPKCKDCALQSICPSASK 315
>gi|269303279|gb|ACZ33379.1| A/G-specific adenine glycosylase [Chlamydophila pneumoniae LPCoLN]
Length = 369
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ + + K L + + +++ V+ ++ Q+ V E
Sbjct: 8 EKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFNQWMERFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + A E+ + +G Y ++ +++ + +++ EF KIP L ++ G+G
Sbjct: 68 TLESLAAAKEEDVIKLWEGLGYYS-RARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
+ IL+ AF VD ++ R+ +RI L + V + ++P K
Sbjct: 127 YTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIETSIDLESTRTWVSRIAQALLPHKSPEV 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK + PQC C + C ++
Sbjct: 187 IAEALIELGACICK-KVPQCHRCPVRQACGAWRE 219
>gi|307636832|gb|ADN79282.1| A/G specific adenine glycosylase [Helicobacter pylori 908]
gi|325995421|gb|ADZ50826.1| A/G-specific adenine glycosylase [Helicobacter pylori 2018]
gi|325997019|gb|ADZ49227.1| A/G-specific adenine glycosylase [Helicobacter pylori 2017]
Length = 328
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ V + F A
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E +++P + L +LPGIG
Sbjct: 61 FPTLKDLANAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F T VD ++ R+ GL P ++ + P +N +
Sbjct: 121 AYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLNPNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 181 ALIDLGALICSP-KPKCAICPFNPYC 205
>gi|326437547|gb|EGD83117.1| hypothetical protein PTSG_12076 [Salpingoeca sp. ATCC 50818]
Length = 504
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 5/181 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKS 105
F ++VA++LS+Q+ D +KA + L + + + L+ I +G +R+K+
Sbjct: 200 FHILVALMLSSQTKDELTSKAVRTLQQQLPGGLTPHTVTAAETRVLEECIYGVGFWRRKA 259
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRIS 164
+ + S +++ F IPQT+ L +LPG+G K A + +++A + VDTH+ RI+
Sbjct: 260 QYLKGASTMILASFGGDIPQTIPDLIKLPGVGMKMATITMAVANKQVSGIGVDTHVHRIA 319
Query: 165 NRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
NR+ P L R +P + + LV G+ +C+ R+P+C C+ +LC
Sbjct: 320 NRLRWVRNTKTPEHTRVELERWMPRRLWGEVNLLLVGFGQTICQPRQPKCHECLNKDLCP 379
Query: 224 R 224
Sbjct: 380 S 380
>gi|324511601|gb|ADY44825.1| Endonuclease III-like protein 1 [Ascaris suum]
Length = 266
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V+++LS+Q+ D A + L T + ++ + E +LQ+ + +G Y++K+ +
Sbjct: 83 FQILVSLMLSSQTKDQITAAAMQRLRSRGCTVEGIIEMSELELQDLLIPVGFYKRKAIYL 142
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ IL N++ IP T+E L LPG+G K A++ + A+G VDTH+ RI+NR+
Sbjct: 143 KKVADILSNKYGGDIPNTVEDLCSLPGVGPKMAHLAMQHAWGRIEGLGVDTHVHRIANRL 202
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G KTP + +L +IP + + LV G+ C P+C C+ ++C I
Sbjct: 203 GWVKTKTPEQTRVALEELIPKERWAGLNKLLVGFGQQTCLPTLPKCSDCLNKDICPAI 260
>gi|312880248|ref|ZP_07740048.1| DNA-(apurinic or apyrimidinic site) lyase [Aminomonas paucivorans
DSM 12260]
gi|310783539|gb|EFQ23937.1| DNA-(apurinic or apyrimidinic site) lyase [Aminomonas paucivorans
DSM 12260]
Length = 232
Score = 92.3 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 21/231 (9%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPS--PKGELYYVNHFTLIVAVLLSAQSTD 63
S +G +PLG E L + + +L + ++ +LS + D
Sbjct: 3 PSGVPRGAAPLG---------ETLDLLEGVYGNEGALPDLGHPEPLDGLILTVLSQNTND 53
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---- 119
+N ++A L + + ++Q IR G+ K +I ++ L ++
Sbjct: 54 LNRDRAYITLRGRFPDWESVALADPGEVQEAIRIAGLANAKGPSIQAILERLREDWGAPT 113
Query: 120 -----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK- 173
K + E L LPG+G K A ++ G P VDTH+ RI R+G P
Sbjct: 114 LVPLRSWKPDRAREYLEALPGVGPKTAACVMVFDLGFPAFPVDTHVARICRRLGWVPANL 173
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P+++++ + + + AH L+ HGR VC+AR P+C +C++ +C
Sbjct: 174 PPHRIQRVMEETVARERFQGAHLNLIAHGRAVCRARSPRCPACVLVGVCPA 224
>gi|15618317|ref|NP_224602.1| adenine glycosylase [Chlamydophila pneumoniae CWL029]
gi|15835935|ref|NP_300459.1| adenine glycosylase [Chlamydophila pneumoniae J138]
gi|16753072|ref|NP_444901.1| A/G-specific adenine glycosylase [Chlamydophila pneumoniae AR39]
gi|33241748|ref|NP_876689.1| A/G-specific adenine glycosylase [Chlamydophila pneumoniae TW-183]
gi|4376682|gb|AAD18546.1| Adenine Glycosylase [Chlamydophila pneumoniae CWL029]
gi|8163415|gb|AAF73658.1| A/G-specific adenine glycosylase [Chlamydophila pneumoniae AR39]
gi|8978774|dbj|BAA98610.1| adenine glycosylase [Chlamydophila pneumoniae J138]
gi|33236257|gb|AAP98346.1| A/G-specific adenine glycosylase [Chlamydophila pneumoniae TW-183]
Length = 369
Score = 91.9 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 23 KELEEI-FYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ + + K L + + +++ V+ ++ Q+ V E
Sbjct: 8 EKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFNQWMERFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
T + + A E+ + +G Y ++ +++ + +++ EF KIP L ++ G+G
Sbjct: 68 TIESLAAAKEEDVIKLWEGLGYYS-RARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYN 193
+ IL+ AF VD ++ R+ +RI L + V + ++P K
Sbjct: 127 YTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIETSIDLESTRTWVSRIAQALLPHKSPEV 186
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +CK + PQC C + C ++
Sbjct: 187 IAEALIELGACICK-KVPQCHRCPVRQACGAWRE 219
>gi|222616816|gb|EEE52948.1| hypothetical protein OsJ_35582 [Oryza sativa Japonica Group]
Length = 435
Score = 91.9 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 75/216 (34%), Gaps = 26/216 (12%)
Query: 32 FSLKWPSPKGELYYVNH------------------FTLIVAVLLSAQSTDVNVNKATKHL 73
+ + + +L + + + V+ ++ Q+ V
Sbjct: 59 LLRWYDANRRDLPWRRAAEPAGSGSGSGRGEEKRAYAVWVSEVMLQQTRVPVVVDYYSGG 118
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ +A T + A ++++ +G YR+ + I+ + L +
Sbjct: 119 WPLA-TVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPRTASA---LREV 174
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL----RIIPPK 189
GIG A I S+AF VD ++ IS + + + ++ P
Sbjct: 175 RGIGDYTAGAIASIAFNEVVPVVDGNVRVISRLYAIPDNPKESSTVKRFWQLTGELVDPS 234
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + ++ G +C+ KP C C +SN C+ +
Sbjct: 235 RPGDFNQAIMELGATLCRKTKPGCSQCPVSNHCQAL 270
>gi|257453640|ref|ZP_05618930.1| A/G-specific adenine glycosylase [Enhydrobacter aerosaccus SK60]
gi|257449098|gb|EEV24051.1| A/G-specific adenine glycosylase [Enhydrobacter aerosaccus SK60]
Length = 413
Score = 91.9 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 12/198 (6%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P + +L + + + ++ ++ Q+ V + T Q + +++ +
Sbjct: 41 PWQQHQLDTPDPYPVWLSEIMLQQTQVATVIPYFERFMASFPTVQDLANASWEQVAEHWA 100
Query: 97 TIGIYRKKSENIISLSHILINEFDN-KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+G Y + ++ K PQT+ ++ G+G+ A I++M G
Sbjct: 101 GLGYYARARNLHKGAKQLVDIIEQTGKFPQTVAHWEQISGVGKSTAGAIVAMGVRADQYG 160
Query: 156 VDTHIFRISN-----------RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
D + N + T + Q R+ P + + ++ G
Sbjct: 161 GDRGVICDGNVKRVLTRWAGIDGDITKTATTKALWQLAERLTPTRDSGHYAQAMMDMGAT 220
Query: 205 VCKARKPQCQSCIISNLC 222
+C KP C C + C
Sbjct: 221 LCTKAKPACLLCPVQADC 238
>gi|71410883|ref|XP_807715.1| A/G-specific adenine glycosylase [Trypanosoma cruzi strain CL
Brener]
gi|70871775|gb|EAN85864.1| A/G-specific adenine glycosylase, putative [Trypanosoma cruzi]
Length = 451
Score = 91.9 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + V ++S Q+ V + I T + E+ ++ +G YR+
Sbjct: 47 RNPYHVWVCEVMSQQTQMGTVISYFQRWVSIFPTVAVLAEASEESVKTAWSGLGYYRRAL 106
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + ++ F+ K+P T L ++PGIG A I S+ FG VD ++ R+
Sbjct: 107 -YLKKGAEYVMKHFNGKLPVTAVELQQIPGIGPYTAAAISSICFGEKVASVDGNVVRVIT 165
Query: 166 RIGLAPGKTP------NKVEQSLLRII---PPKHQYNAHYWLVLHGRYVCKAR-KPQCQS 215
R+ P V+Q ++ P ++ + L+ G VCK +P C+
Sbjct: 166 RLRCEREVDPKAAKTIKAVKQWAQELMDEGPCENPGAFNEGLMKIGSSVCKPSGRPLCEE 225
Query: 216 CIISNLCKRI 225
C + CK
Sbjct: 226 CPLQRFCKSY 235
>gi|225164958|ref|ZP_03727170.1| HhH-GPD family protein [Opitutaceae bacterium TAV2]
gi|224800432|gb|EEG18816.1| HhH-GPD family protein [Opitutaceae bacterium TAV2]
Length = 355
Score = 91.9 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 12/209 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + + + L + + +V+ + Q+ V + +
Sbjct: 18 FQHALLAWYHASRRTLPWREAPSLYKTVVSEFMLQQTQVKTVLPYFARWLDAFPDFAALA 77
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A E+++ + +G Y + ++ IP+ + LPGIG + I
Sbjct: 78 AAPEERVLKHWEGLGYYTRARNLHKLARALVALPE---IPRRPDDWLALPGIGPYTSAAI 134
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL------RIIPPKHQYNAHYWL 198
S+AFG P VD ++ RI R+ + S I+ P H + + +
Sbjct: 135 TSIAFGEPVAVVDGNVVRILTRLTADGTPFRDSATASKHFVPLANAIVNPAHPGDHNQAM 194
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G +C + P C C + C ++
Sbjct: 195 MELGATMCHRQNPLCTVCPVIRFCAARRE 223
>gi|256397466|ref|YP_003119030.1| HhH-GPD family protein [Catenulispora acidiphila DSM 44928]
gi|256363692|gb|ACU77189.1| HhH-GPD family protein [Catenulispora acidiphila DSM 44928]
Length = 310
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 14/234 (5%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLL 57
++ + + G + L + E+ + + +L + + ++V+ +
Sbjct: 1 MAERTTGRGTGPTELADF---EHGAELVERVVDWFRAEARDLPWRRPDASAWAVMVSEFM 57
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + TP + A + +G R+ + + + +
Sbjct: 58 LQQTPVARVLPVYEAWLARWPTPAALAAEPVGEAVRAWGRLGYPRRAQR-LHAAATAVEE 116
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
FD +P + L LPG+G A I S A+ I +DT++ R+ R+
Sbjct: 117 AFDGTVPDAYDDLCALPGVGEYTAGAIASFAYKKRHIVLDTNVRRVLARVVTGTEFPAAA 176
Query: 178 V----EQSLLRIIPPKHQYNAHYWL--VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ ++P A + + G VC AR P+C +C ++ LC+ +
Sbjct: 177 TTPADRRIATALLPQNAPDAAEWAAASMELGAVVCTARAPRCDACPVAKLCRWV 230
>gi|328883261|emb|CCA56500.1| A or G-specific adenine glycosylase [Streptomyces venezuelae ATCC
10712]
Length = 311
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 14/232 (6%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVL 56
M S S + S P E+ + +L + + ++V+
Sbjct: 1 MTSIDASPMPEAPSAPALPTPPA---ELHGPVLAWFDRHARDLPWRRPEAGAWGVMVSEF 57
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V V + P + A + +G R+ + + + +
Sbjct: 58 MLQQTPVVRVLPVYEQWLARWPRPADLAAEASGEAVRAWGRLGYPRRALR-LHAAAVAIT 116
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+P L LPGIG A + S A+G +DT++ R+ R PN
Sbjct: 117 ERHGGDVPSDHGQLLALPGIGEYTAAAVASFAYGQRHAVLDTNVRRVFARAATGVQYPPN 176
Query: 177 KV----EQSLLRIIPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++P + G VC A+ C C I+ C
Sbjct: 177 ATTAAERRLARALLPQDESTASRWAAASMELGALVCTAKNEDCSRCPIAGHC 228
>gi|258538839|ref|YP_003173338.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus Lc 705]
gi|257150515|emb|CAR89487.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus Lc 705]
Length = 365
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + + L + + + ++V+ L+ Q+ V K
Sbjct: 3 WPPEKIAAFQHALLDWYDHHARALPWRQDHDPYHVMVSELMLQQTQVQTVIPYYKRFMAQ 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E + +G Y ++ + + ++N++D K P+T L L GI
Sbjct: 63 FPTVEALAAAPEATVLKAWEGLGYYS-RARRLQQAAKQIVNDYDGKWPKTAAELQTLAGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG +D + FR+ R+ + + +I P K
Sbjct: 122 GPYTAGAIASISFGEVVPAIDGNAFRVFARLFKVDADIARPQTRKVFDDLIRPLMPKKRP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P +
Sbjct: 182 GDFNQAVMDLGSSYMSASHPDPAHSPVRAF 211
>gi|229553700|ref|ZP_04442425.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus LMS2-1]
gi|229312922|gb|EEN78895.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus LMS2-1]
Length = 411
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + + L + + + ++V+ L+ Q+ V K
Sbjct: 49 WPPEKIAAFQHALLDWYDHHARALPWRQDHDPYHVMVSELMLQQTQVQTVIPYYKRFMAQ 108
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E + +G Y ++ + + ++N++D K P+T L L GI
Sbjct: 109 FPTVEALAAAPEATVLKAWEGLGYYS-RARRLQQAAKQIVNDYDGKWPKTAAELQTLAGI 167
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG +D + FR+ R+ + + +I P K
Sbjct: 168 GPYTAGAIASISFGEVVPAIDGNAFRVFARLFKVDADIARPQTRKVFDDLIRPLMPKKRP 227
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P +
Sbjct: 228 GDFNQAVMDLGSSYMSASHPDPAHSPVRAF 257
>gi|167901250|ref|ZP_02488455.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei NCTC
13177]
Length = 368
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG+ +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGVRATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|325267847|ref|ZP_08134497.1| A/G-specific adenine glycosylase [Kingella denitrificans ATCC
33394]
gi|324980728|gb|EGC16390.1| A/G-specific adenine glycosylase [Kingella denitrificans ATCC
33394]
Length = 347
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ E + + + + + ++ ++ Q+ V T + +
Sbjct: 8 DFAEKLVAWQREHGRHDFPWQVRDPYAVWLSEIMLQQTQAATVRDYFLRFIRELPTVRDL 67
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
A + + +G Y ++ N+ + + +++EF + PQT E RL G+GR A
Sbjct: 68 AAAPQDTVLALWAGLGYYS-RARNLHAAAQQIMDEFGGEFPQTREEWQRLKGVGRSTAAA 126
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRI----IPPK--HQYNAHY 196
+++ AF +D ++ R+ RI G E+SL + +P
Sbjct: 127 VMAFAFHSRETILDGNVKRVLCRIFAQDGDPKSPAFERSLWALAEQLLPDNAADMPAYTQ 186
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC KP+C C +++ C +Q
Sbjct: 187 GLMDLGATVCTRNKPKCGDCPMAHQCLAKQQ 217
>gi|322488912|emb|CBZ24161.1| putative endonuclease III [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 258
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LSAQ+ DV A L + T Q + A+ E++L +I +G + K+ NI
Sbjct: 50 FHTLVALMLSAQTKDVVTAAAMDALIKRGLTAQSVHAMTERELDKHICKVGFHNTKARNI 109
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
++ IL+ ++D K+P+ + LPG+G K AN+ A VDTH+ RIS R
Sbjct: 110 KEVAAILMKDYDGKVPREYAEVIALPGVGPKMANLFFQDADHRVIGIGVDTHVHRISQRY 169
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK-R 224
P KTP ++L +P +H + +V G+ VC +P+C C +S +C
Sbjct: 170 RWVPSTVKTPEDTRKALESWLPLEHWGTINSLMVGLGQTVCTPLRPKCDICELSGICPNA 229
Query: 225 IKQ 227
K+
Sbjct: 230 FKE 232
>gi|167909467|ref|ZP_02496558.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 112]
Length = 368
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|254196996|ref|ZP_04903420.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei S13]
gi|169653739|gb|EDS86432.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei S13]
Length = 368
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|53724079|ref|YP_104599.1| A/G-specific adenine glycosylase [Burkholderia mallei ATCC 23344]
gi|67643433|ref|ZP_00442179.1| A/G-specific adenine glycosylase [Burkholderia mallei GB8 horse 4]
gi|121599895|ref|YP_991434.1| A/G-specific adenine glycosylase [Burkholderia mallei SAVP1]
gi|124383886|ref|YP_001027490.1| A/G-specific adenine glycosylase [Burkholderia mallei NCTC 10229]
gi|126448107|ref|YP_001082456.1| A/G-specific adenine glycosylase [Burkholderia mallei NCTC 10247]
gi|167001040|ref|ZP_02266841.1| A/G-specific adenine glycosylase [Burkholderia mallei PRL-20]
gi|167917496|ref|ZP_02504587.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei BCC215]
gi|237810777|ref|YP_002895228.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei
MSHR346]
gi|254174839|ref|ZP_04881500.1| A/G-specific adenine glycosylase [Burkholderia mallei ATCC 10399]
gi|254187794|ref|ZP_04894306.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei Pasteur
52237]
gi|254201688|ref|ZP_04908052.1| A/G-specific adenine glycosylase [Burkholderia mallei FMH]
gi|254207020|ref|ZP_04913371.1| A/G-specific adenine glycosylase [Burkholderia mallei JHU]
gi|254296088|ref|ZP_04963545.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 406e]
gi|254357499|ref|ZP_04973773.1| A/G-specific adenine glycosylase [Burkholderia mallei 2002721280]
gi|52427502|gb|AAU48095.1| A/G-specific adenine glycosylase [Burkholderia mallei ATCC 23344]
gi|121228705|gb|ABM51223.1| A/G-specific adenine glycosylase [Burkholderia mallei SAVP1]
gi|124291906|gb|ABN01175.1| A/G-specific adenine glycosylase [Burkholderia mallei NCTC 10229]
gi|126240977|gb|ABO04070.1| A/G-specific adenine glycosylase [Burkholderia mallei NCTC 10247]
gi|147747582|gb|EDK54658.1| A/G-specific adenine glycosylase [Burkholderia mallei FMH]
gi|147752562|gb|EDK59628.1| A/G-specific adenine glycosylase [Burkholderia mallei JHU]
gi|148026563|gb|EDK84648.1| A/G-specific adenine glycosylase [Burkholderia mallei 2002721280]
gi|157805955|gb|EDO83125.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 406e]
gi|157935474|gb|EDO91144.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei Pasteur
52237]
gi|160695884|gb|EDP85854.1| A/G-specific adenine glycosylase [Burkholderia mallei ATCC 10399]
gi|237504608|gb|ACQ96926.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei
MSHR346]
gi|238524785|gb|EEP88216.1| A/G-specific adenine glycosylase [Burkholderia mallei GB8 horse 4]
gi|243063111|gb|EES45297.1| A/G-specific adenine glycosylase [Burkholderia mallei PRL-20]
Length = 368
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|53718166|ref|YP_107152.1| putative A/G-specific adenine glycosylase [Burkholderia
pseudomallei K96243]
gi|134279844|ref|ZP_01766556.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 305]
gi|217420176|ref|ZP_03451682.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 576]
gi|254181861|ref|ZP_04888458.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1655]
gi|52208580|emb|CAH34516.1| putative A/G-specific adenine glycosylase [Burkholderia
pseudomallei K96243]
gi|134249044|gb|EBA49126.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 305]
gi|184212399|gb|EDU09442.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 1655]
gi|217397480|gb|EEC37496.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 576]
Length = 368
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|297618105|ref|YP_003703264.1| HhH-GPD family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145942|gb|ADI02699.1| HhH-GPD family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 252
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++ + + + N + +++A +L ++ V + TP
Sbjct: 23 KILFFQEGLLKWFEKNRRSFLWRETHNPWYILLAEVLLQKTNARKVENIYAEFINLYPTP 82
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
K+L +LQ ++ +G++ KS+ + SL+ ++ F+ +P + + L LPG+G
Sbjct: 83 AKLLN-AGPELQELLKPLGLWAAKSKILRSLAKSIVENFNGLVPDSFDNLISLPGVGSYI 141
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN------KVEQSLLRIIPPKHQ-YN 193
A+ +LS A+ T VDT++ RI R N ++ + + ++P +
Sbjct: 142 ASAVLSFAYEKRTPIVDTNVIRILERYFGVCSTKNNNKERDQQIWRFVEVLLPESNCVKR 201
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ LV G VC P C +C I+ CK +
Sbjct: 202 FNLALVDFGALVCTHYHPHCDTCCIAPYCKYYSR 235
>gi|291276518|ref|YP_003516290.1| A/G-specific adenine glycosylase [Helicobacter mustelae 12198]
gi|290963712|emb|CBG39546.1| A/G-specific adenine glycosylase [Helicobacter mustelae 12198]
Length = 312
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 71/201 (35%), Gaps = 12/201 (5%)
Query: 30 YLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + + EL + N + + V+ ++ Q+ V + T
Sbjct: 5 ELLLEWYERCGRKELPWRNLMGDQASYGVYVSEVMLQQTRVSAVLEYFDAFMRAYPTLHS 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + + + +G Y + + + +P L+ L LPGIG A
Sbjct: 65 LSLASQDAVLLLWQGLGYYSRAKNLLKTARMTGTK-----LPSDLDSLLALPGIGDYTAR 119
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
IL FG DT+I R R + + + + K+ ++ + L+ G
Sbjct: 120 AILCFGFGQAVGFYDTNIKRFFCRYFALTAPSHKTLHRIAQDFLNLKNPFDHNQALLDLG 179
Query: 203 RYVCKARKPQCQSCIISNLCK 223
VC + P C+ C + CK
Sbjct: 180 ALVCLPKNPHCKICPLHLTCK 200
>gi|319442427|ref|ZP_07991583.1| putative A/G-specific DNA glycosylase [Corynebacterium variabile
DSM 44702]
Length = 322
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 30/224 (13%)
Query: 31 LFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
L + + L + + ++++ ++S Q+ V + E TP +
Sbjct: 20 LLNDWFHRTARPLPWREPGTTPWAILLSEIMSQQTPVARVEPLWRQWTERWPTPADLADA 79
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ +G R+ + + ++ D +P + L LPG+G A + +
Sbjct: 80 PVDEVLRAWANLGYPRRALR-LRDCARAIVERHDGVVPSDVAELLALPGVGGYTARAVAA 138
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQ------------SLLRIIPPKHQYN 193
AFG VDT++ R+ RI + P K ++ +
Sbjct: 139 FAFGSVVPVVDTNVRRVQRRIVQGEYLQGPAKARDLADVADLMPWVDDDPDLVKRGYTGP 198
Query: 194 AHYW------------LVLHGRYVCKARKPQCQSCIISNLCKRI 225
H L+ G VC AR P+C C +S+ C+ +
Sbjct: 199 LHDRSRRDEALGMCSSLMELGAVVCTARSPRCGECPVSSRCRWL 242
>gi|160872085|ref|ZP_02062217.1| A/G-specific adenine glycosylase [Rickettsiella grylli]
gi|159120884|gb|EDP46222.1| A/G-specific adenine glycosylase [Rickettsiella grylli]
Length = 354
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 7/208 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
++I F + + ++ ++ Q+ V + T +
Sbjct: 10 KKILTWFHQSGRKHLPWQQVQSPYFTWLSEIMLQQTQVTTVIPYFQRFTHHFPTLSSLAN 69
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G Y ++ ++ + I+ ++ K PQ L L LPGIGR A I
Sbjct: 70 ASLDEVIRLWSGLGYYA-RARHLHRCAQIIEEKYKGKFPQALILLQNLPGIGRSTAGAIR 128
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPP-KHQYNAHYWLV 199
++AF P +D ++ R+ +R G ++ R P KH + ++
Sbjct: 129 ALAFNQPAAILDGNVKRVFSRFHTLSGWPGLTHVNKQLWTLAERYTPHNKHVRHYTQAMM 188
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G +C + QC C + CK K+
Sbjct: 189 DLGALICTPKHAQCTECPLQRHCKAYKE 216
>gi|114332269|ref|YP_748491.1| A/G-specific adenine glycosylase [Nitrosomonas eutropha C91]
gi|114309283|gb|ABI60526.1| A/G-specific DNA-adenine glycosylase [Nitrosomonas eutropha C91]
Length = 376
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 80/199 (40%), Gaps = 13/199 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V + + + + +++
Sbjct: 32 RHSLPWQGISDPYAIWISEIMLQQTQVSTVIPYYERFMTVFPNIAPLASAPVEEVLTLWS 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y + N+ + +++ ++ PQ + L RLPGIGR A I + AFG +
Sbjct: 92 GLGYYS-RGRNLHRTARMIMEQYGGAFPQDIATLQRLPGIGRSTAAAIAAFAFGKRCTIL 150
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRII--------PPKHQYNAHYWLVLHGRYVCK 207
D ++ RI R G + +E+ L ++ K + L+ G VC
Sbjct: 151 DGNVKRILIRYFGVNGHPGERMIEEQLWQLAEGLLPVEEDHKTIASYTQALMDLGALVCV 210
Query: 208 ARKPQCQSCIISNLCKRIK 226
+P+C+ C + C +
Sbjct: 211 RTQPRCEHCPLQADCYAYQ 229
>gi|170782214|ref|YP_001710547.1| A/G-specific adenine glycosylase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156783|emb|CAQ01946.1| A/G-specific adenine glycosylase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 283
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 11/201 (5%)
Query: 32 FSLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V V + P + +
Sbjct: 1 MNAWFRENARDLPWRREGFGSWGILVSEFMLQQTPVVRVIPRLEEWLARWPVPAALASTP 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ N+ + + ++ ++P+ ++ L LPGIG A + ++
Sbjct: 61 ASEAVRAWGRLGYPRRAL-NLHACAVAIVERHGGEVPEDVDALLDLPGIGPYTARAVAAL 119
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE----QSLLRIIPPK--HQYNAHYWLVLH 201
AFG VD ++ R+ R G ++ +P + +
Sbjct: 120 AFGHRHPVVDVNVRRVLARAVAGQGDPGPARTTVDLAAMEAQLPDDVAEARVFNAGAMEL 179
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C I +LC
Sbjct: 180 GAVVCTARAPRCDDCPIRDLC 200
>gi|148273331|ref|YP_001222892.1| A/G-specific adenine glycosylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831261|emb|CAN02217.1| A/G-specific adenine glycosylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 292
Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + +L + + ++V+ + Q+ V V + P+ + +
Sbjct: 11 NAWFRENARDLPWRREGFGSWGILVSEFMLQQTPVVRVIPRLEEWLARWPVPEALASAPA 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ N+ + + ++ ++PQ ++ L LPG+G A + + A
Sbjct: 71 SEAVRAWGRLGYPRRAL-NLHACAVAIVERHGGEVPQDVDALLDLPGVGPYTARAVAAFA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVE----QSLLRIIPPK--HQYNAHYWLVLHG 202
FG VD ++ R+ R G Q++ +P + + G
Sbjct: 130 FGHRHPVVDINVRRVLARAIAGQGDPGPARTTVDLQAMEAQLPDDVAEARVFNAGAMELG 189
Query: 203 RYVCKARKPQCQSCIISNLC 222
+C AR P+C C + +LC
Sbjct: 190 AVICTARAPRCDDCPVRDLC 209
>gi|260578408|ref|ZP_05846322.1| A/G-specific DNA glycosylase [Corynebacterium jeikeium ATCC 43734]
gi|258603430|gb|EEW16693.1| A/G-specific DNA glycosylase [Corynebacterium jeikeium ATCC 43734]
Length = 385
Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 51/247 (20%)
Query: 30 YLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + +L + + ++++ ++S Q+ V + E TP + A
Sbjct: 57 AKLNAWYARNARDLPWRHPDTTPWAILLSEVMSQQTPVARVIPLWRAWLERWPTPADLAA 116
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
++ +G R+ + + + D +P + L LPGIG A +
Sbjct: 117 APRSEILRMWANLGYPRRALR-LKECAIACVERHDGAVPHDIAELEALPGIGHYTARAVA 175
Query: 146 SMAFGIPTIGVDTHIFRISNR---IGLAPGKTPNKVEQSLLRIIPPKHQ----------- 191
+ AFG VDT++ R+ R G + + ++P
Sbjct: 176 AFAFGQAVPVVDTNVRRVYRRLVDGRYLQGPARARDLADVASLLPHVDPDPRLDGRQLLP 235
Query: 192 ----------------------------YNAH----YWLVLHGRYVCKARKPQCQSCIIS 219
+A L+ G +C A+ P C C +
Sbjct: 236 PPQPQPTDTGTGTDSCAGGSTATARDADRDAANLMCAALMELGALICTAKSPACDQCPVI 295
Query: 220 NLCKRIK 226
+ C ++
Sbjct: 296 DDCAWVQ 302
>gi|293324782|emb|CBK55598.1| C. elegans protein R10E4.5a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 293
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + K+L L+ + +G Y++K+ +
Sbjct: 63 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYL 122
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL ++F IP +L+GL LPG+G K AN+++ +A+G I VDTH+ RISNR+
Sbjct: 123 QKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRL 182
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G TP K +++L ++P ++ LV G+ C+ +P+C +C+ C
Sbjct: 183 GWIKTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPS 239
>gi|195385699|ref|XP_002051542.1| GJ16118 [Drosophila virilis]
gi|194147999|gb|EDW63697.1| GJ16118 [Drosophila virilis]
Length = 353
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A K L TP + + +L+ + + Y+ K++ +
Sbjct: 166 FHKLVALMLSSQTKDETTFEAMKRLKAQTLTPASIQGMPAVELERLLHPVSFYKNKAKYL 225
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL+++++ IP ++ L +LPG+G K A++ ++ A+ T VDTH+ RI+NR+
Sbjct: 226 KQTSQILVDKYNEDIPDNIQELLKLPGVGPKMAHICMATAWNKITGIGVDTHVHRIANRL 285
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
K P + L +P ++ LV G+ +C +P C C+ ++C
Sbjct: 286 AWLKKSTKEPEQTRVQLESWLPRPLWSEVNHLLVGFGQTICTPVRPNCSECLNRHICPA 344
>gi|332968828|gb|EGK07875.1| A/G-specific adenine glycosylase [Kingella kingae ATCC 23330]
Length = 371
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 8/202 (3%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ + + + ++ ++ Q+ V + T Q + A + +
Sbjct: 38 QREHGRHDFPWQVRDPYRVWLSEIMLQQTQASTVRDYYTRFVAVLPTVQDLAAAEQDTVL 97
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+G Y ++ N+ + + ++ +F + P T L +L G+GR A I + FG
Sbjct: 98 ALWAGLGYYS-RARNLQAAAQQIVQDFGGQFPSTRLELEQLKGVGRSTAAAIAAFVFGAR 156
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRI---IPPKHQYN---AHYWLVLHGRYV 205
+D ++ R+ R+ G+ NK E+ L + + P+ + L+ G +
Sbjct: 157 ETILDGNVKRVLCRVFAQDGEPQNKAFERELWALAESLLPEQSSDMPAYTQGLMDLGATL 216
Query: 206 CKARKPQCQSCIISNLCKRIKQ 227
C KPQC C +S+ C +Q
Sbjct: 217 CIRSKPQCSRCPMSDKCLAYQQ 238
>gi|218883640|ref|YP_002428022.1| Endonuclease III [Desulfurococcus kamchatkensis 1221n]
gi|218765256|gb|ACL10655.1| Endonuclease III [Desulfurococcus kamchatkensis 1221n]
Length = 238
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNH-------FTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+E+ ++ E F +I AV+LS ++D N +A + L E+
Sbjct: 11 DEVLNRLRKEYKLDADEFVVSERCIQSNRLFEIITAVILSQNTSDRNACRALQKLRELTG 70
Query: 79 TPQKMLAI---GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI----------PQ 125
+ KL++ +R G+YR +S I L+ + + +
Sbjct: 71 GVITPETVLLLPVDKLEDALRPAGMYRNRSRVIRELASVFNQGGFQERLISEVSRSSVEE 130
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
L LPG+G K A+V+L F P VDTHI RI+ R+G ++ + + +
Sbjct: 131 ARRLLMELPGVGWKTADVVLLRYFRKPVFPVDTHITRITMRMGFTGSRSYKHISRFWMDN 190
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P + + H +L+ HGR C+ARKP C C++ ++CK
Sbjct: 191 TSPGNYLDLHLYLITHGRRTCRARKPLCNKCVLRDMCKY 229
>gi|18075690|emb|CAD11256.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVVERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +++ R +G Y +++N+ + I + E ++++P + L +LPGI
Sbjct: 61 FPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD +I R+ GL P ++ + P +N +
Sbjct: 120 GAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLNPNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 180 QALIDLGALICSP-KPKCAICPFNPYC 205
>gi|296242620|ref|YP_003650107.1| HhH-GPD family protein [Thermosphaera aggregans DSM 11486]
gi|296095204|gb|ADG91155.1| HhH-GPD family protein [Thermosphaera aggregans DSM 11486]
Length = 217
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
T +++E + + + + + + +++ LL ++T V K F
Sbjct: 4 TEEKIEFFRRKVVDFYLTQGRKWPWRETRDPYVVLITELLLQKTTAKQVVKVFSSFFSKF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ E ++ I +G+ ++ + L+ + EF +KIP TLE L +L G+G
Sbjct: 64 PNIGTLAKASETDIEAIIGELGLRKRAG-FLRELAQHAVEEFGDKIPNTLEDLMKLKGVG 122
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP----NKVEQSLLRIIPPKHQYN 193
AN + S A+G+ VD ++ R+ R G+ P ++ + +I+P
Sbjct: 123 LYTANAVRSFAYGMCVPVVDRNVARVLRRFFGLEGEKPAYADRELWKFAEKIMPTSACRE 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+Y L+ G +C +R+PQC C + C
Sbjct: 183 FNYGLIDLGAMICTSREPQCSRCPLRPECAYF 214
>gi|302877518|ref|YP_003846082.1| A/G-specific adenine glycosylase [Gallionella capsiferriformans
ES-2]
gi|302580307|gb|ADL54318.1| A/G-specific adenine glycosylase [Gallionella capsiferriformans
ES-2]
Length = 362
Score = 91.5 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 8/190 (4%)
Query: 40 KGELYYV--NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+ +L + + + + ++ ++ Q+ V V + T + + E+++ +
Sbjct: 29 RHDLPWQCADPYCIWLSEIMLQQTQVVTVIPYYQRFVASFPTIAALASATEEQVLAHWSG 88
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G Y + N+ + I++ + P+ E + LPGIGR A I ++A+ +D
Sbjct: 89 LGYYA-RGRNLHRAAQIIVAQHGGAFPRQFELILALPGIGRSTAAAICALAYQQNRAILD 147
Query: 158 THIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
++ R+ R G K + Q ++P L+ G +C +P+
Sbjct: 148 GNVRRVLARYCGIYGSPAIKSVEARLWQQAEALLPLNDVDRYTQALMDMGATLCTRSRPK 207
Query: 213 CQSCIISNLC 222
C SC + C
Sbjct: 208 CASCPVQPDC 217
>gi|199596947|ref|ZP_03210380.1| A/G-specific DNA glycosylase [Lactobacillus rhamnosus HN001]
gi|199592080|gb|EDZ00154.1| A/G-specific DNA glycosylase [Lactobacillus rhamnosus HN001]
Length = 411
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + + L + + + ++V+ L+ Q+ V
Sbjct: 49 WPPEKVAAFQHALLDWYDHHARALPWRQDHDPYHVMVSELMLQQTQVQTVIPYYNRFMAQ 108
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E + +G Y ++ + + ++N++D K P+T L L GI
Sbjct: 109 FPTVEALAAAPEATVLKAWEGLGYYS-RARRLQQAAKQIVNDYDGKWPKTAAELQTLAGI 167
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG +D + FR+ R+ + + +I P +
Sbjct: 168 GPYTAGAIASISFGEVVPAIDGNAFRVFARLFKVDADIARPQTRKVFDDLIRPLMPKERP 227
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P +
Sbjct: 228 GDFNQAVMDLGSSYMSASHPDPAHSPVRAF 257
>gi|116515279|ref|YP_802908.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Cc
(Cinara cedri)]
gi|116257133|gb|ABJ90815.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 343
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
N + + ++ ++ Q+ V + + T +K+ K+ +G Y
Sbjct: 20 PWQKKNIYYIWISEIMLQQTRVQTVIPYFQKFKKKFPTIKKLADSNINKVLYLWSGLGYY 79
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ ++ N+ + I+ ++ P + + +LPGIGR A ILS + +D++I
Sbjct: 80 Q-RAHNLHKTAKIIKKKYYGIFPTNINEIIKLPGIGRSTAGAILSFTYNYRYAILDSNIK 138
Query: 162 RISNRIGLAPGKTPNKVEQSLL------RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
R+ R L K + + IP + + ++ G +CK + P C S
Sbjct: 139 RVLIRFHLININNFKKNQLENKLWNIIDQYIPLHNARKFNQAMMDLGSLICKNKNPNCFS 198
Query: 216 CIISNLC 222
C + N C
Sbjct: 199 CPLKNNC 205
>gi|62734175|gb|AAX96284.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|62734224|gb|AAX96333.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|218185559|gb|EEC67986.1| hypothetical protein OsI_35754 [Oryza sativa Indica Group]
gi|222615819|gb|EEE51951.1| hypothetical protein OsJ_33589 [Oryza sativa Japonica Group]
Length = 373
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++S+Q+ D + A + L E P ++ E L N I+ +G Y++K++
Sbjct: 160 FAVLISTMMSSQTKDEVTHAAVERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKF 219
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
I S I + F IP +L L L G+G K A++++S+A+ I VDTH+ RISNR
Sbjct: 220 IKEASKICLERFGGDIPDSLNELLALKGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNR 279
Query: 167 IGLAP-------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G TP + SL + +P + LV G+ +C +P+C C I+
Sbjct: 280 LGWVFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDMCGIN 339
Query: 220 NLCKR-IKQ 227
N+C K+
Sbjct: 340 NICPSAFKE 348
>gi|325526892|gb|EGD04366.1| A/G-specific adenine glycosylase [Burkholderia sp. TJI49]
Length = 271
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLIAWQRVHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVVPYYTRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+ +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALAELPGIGRSTAAAIASFAYAARATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRVKPDCVRCPFAGDC 226
>gi|254674024|emb|CBA09808.1| endonuclease III [Neisseria meningitidis alpha275]
Length = 137
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 98/133 (73%)
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
Y +TIG+Y+ KS++I+ IL+ +++ ++P+ E L LPG+GRK ANV+L+ AFG
Sbjct: 1 MEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPEDREALESLPGVGRKTANVVLNTAFGH 60
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
P + VDTHIFR+SNR +APGK +VE L+R IP + +AH+WL+LHGRY CKA KP
Sbjct: 61 PVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYTCKALKP 120
Query: 212 QCQSCIISNLCKR 224
QCQ+CII++LC+
Sbjct: 121 QCQTCIINDLCEY 133
>gi|21221784|ref|NP_627563.1| adenine glycosylase [Streptomyces coelicolor A3(2)]
gi|256787040|ref|ZP_05525471.1| adenine glycosylase [Streptomyces lividans TK24]
gi|289770933|ref|ZP_06530311.1| adenine glycosylase [Streptomyces lividans TK24]
gi|4585587|emb|CAB40855.1| putative adenine glycosylase [Streptomyces coelicolor A3(2)]
gi|289701132|gb|EFD68561.1| adenine glycosylase [Streptomyces lividans TK24]
Length = 308
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ + Q+ V + P + A
Sbjct: 28 DWFDEHARDLPWRRPEAGAWGVMVSEFMLQQTPVSRVQPVYEQWLARWPRPADLAAEAPG 87
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 88 EAVRAWGRLGYPRRALR-LHGAAAAITERHGGDVPADHAQLLALPGIGEYTAAAVASFAY 146
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPK--HQYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + + G
Sbjct: 147 GQRHAVLDTNVRRVLARAVTGVQYPPNATTAAERKLARALLPEEQERAARWAAASMELGA 206
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+K C C I+ C
Sbjct: 207 LVCTAKKESCHRCPIAAQC 225
>gi|57168836|ref|ZP_00367967.1| A/G-specific adenine glycosylase [Campylobacter coli RM2228]
gi|57019883|gb|EAL56566.1| A/G-specific adenine glycosylase [Campylobacter coli RM2228]
Length = 339
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
++++ + L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKQKIQNLQDKLLLWYDKNGRKNLPWRNLESKDCDERLKDIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V K + T Q + E +L + +G Y ++ N+ + +++F+ K
Sbjct: 61 KSVLEKFYFPFLQKFPTLQSLAKANEDELLKAWQGLGYYT-RARNLKKAALECVDKFEGK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ L+ L L GIG A I A+ VD +I R+ +R+ +++E+
Sbjct: 120 LPKKLDELKNLSGIGTYTAGAIACFAYDQKVSFVDGNIRRVLSRLFALENPKMSELERKA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ +N + L+ G +C ++ +C C + + C+
Sbjct: 180 KELLNLADAFNHNQALLDIGALICVSKNAKCGICPLYDFCQ 220
>gi|119944156|ref|YP_941836.1| A/G-specific adenine glycosylase [Psychromonas ingrahamii 37]
gi|119862760|gb|ABM02237.1| A/G-specific DNA-adenine glycosylase [Psychromonas ingrahamii 37]
Length = 358
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 68/179 (37%), Gaps = 6/179 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ V+ ++ Q+ V T + ++ ++ +G Y ++ N+
Sbjct: 31 YRTWVSEVMLQQTQVATVIPYFNKFMRAFPTISYLANAPLDEVLHHWTGLGYYA-RARNL 89
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ + + + P+ + + LPGIGR A ILS+ +D ++ R+ R
Sbjct: 90 HKSAQFIRDNYAGDFPEEFQQVLDLPGIGRSTAGAILSLTLNQNFAILDGNVKRVLTRHQ 149
Query: 169 LAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
G T K + Q ++ P K + ++ G VC K C C + + C
Sbjct: 150 TIEGWTGGKSVENTLWQLAEKLTPAKQTNIFNQAMMDMGAMVCTRSKANCVECPVQDDC 208
>gi|169605847|ref|XP_001796344.1| hypothetical protein SNOG_05954 [Phaeosphaeria nodorum SN15]
gi|160706853|gb|EAT87018.2| hypothetical protein SNOG_05954 [Phaeosphaeria nodorum SN15]
Length = 427
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 18/199 (9%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + T Q + + + +G Y + +
Sbjct: 98 KRAYEVWVSEVMLQQTRVSTVIPYFNNWISKWPTVQDLADANHDDVLAAWKGLGYYSRAT 157
Query: 106 ENIISLSHILINE--FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
++ +P L PGIGR A + S+AFG P +D ++ R+
Sbjct: 158 RLHEGAKAMIAQSAGSTCPLPSKAVDLQEFPGIGRYTAGAVSSIAFGEPEPVLDGNVIRV 217
Query: 164 SNRIGLAPGKTPNK-----VEQSLLRIIPP----------KHQYNAHYWLVLHGRYVCKA 208
+R +K + + R+I + + L+ G VC
Sbjct: 218 LSRQLGLYMDGKDKKATDVLWEEADRLIKHVSGLSDAGVSEVPGQWNQALMELGSTVCTP 277
Query: 209 RKPQCQSCIISNLCKRIKQ 227
KPQC C I C+ +
Sbjct: 278 -KPQCADCPIQATCRVYSE 295
>gi|256773103|dbj|BAI22676.1| homolog of human endonuclease III [Caenorhabditis elegans]
gi|257145792|emb|CAA90766.2| C. elegans protein R10E4.5d, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 298
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + K+L L+ + +G Y++K+ +
Sbjct: 68 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYL 127
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL ++F IP +L+GL LPG+G K AN+++ +A+G I VDTH+ RISNR+
Sbjct: 128 QKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRL 187
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G TP K +++L ++P ++ LV G+ C+ +P+C +C+ C
Sbjct: 188 GWIKTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPS 244
>gi|281422786|ref|ZP_06253785.1| A/G-specific adenine glycosylase [Prevotella copri DSM 18205]
gi|281403154|gb|EFB33834.1| A/G-specific adenine glycosylase [Prevotella copri DSM 18205]
Length = 346
Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 22/211 (10%)
Query: 35 KWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+ +L + + + + ++ ++ Q+ + + + + + A E +
Sbjct: 11 WFRENGRDLPWRETTDPYAIWLSEIILQQTRIAQGWEYWERFMKTYPKVEDLAAASEDDV 70
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ +G Y + + I+ P TLEG+ L G+G A I S AF I
Sbjct: 71 LKLWQGLGYYSRARNLHAAARQIVELGHF---PDTLEGIKALKGVGDYTAAAIGSFAFDI 127
Query: 152 PTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYN-----------AH 195
P VD +++R+ +R + + + ++P +
Sbjct: 128 PAAVVDGNVYRVLSRYFGIDTPINSTQGKKEFAALAQSLLPASSAQQLSDTALSPVAAYN 187
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ G C + P+C C ++ C+ ++
Sbjct: 188 QGMMDFGAIQCTPQSPKCLVCPLAETCEALR 218
>gi|167822671|ref|ZP_02454142.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 9]
gi|226199503|ref|ZP_03795060.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei
Pakistan 9]
gi|225928384|gb|EEH24414.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei
Pakistan 9]
Length = 368
Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLRRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|167568722|ref|ZP_02361596.1| A/G-specific adenine glycosylase [Burkholderia oklahomensis C6786]
Length = 368
Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYMRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVELHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK----HQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G +K VE + + +P L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRVENEMWALAEALLPDAAEQADVTAYTQGLMDLGATLCA 211
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 212 RGKPDCARCPFAGDC 226
>gi|259649018|dbj|BAI41180.1| A/G-specific DNA glycosylase [Lactobacillus rhamnosus GG]
Length = 372
Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + + L + + + ++V+ L+ Q+ V
Sbjct: 10 WPPEKVAAFQHALLDWYDHHARTLPWRQDHDPYHVMVSELMLQQTQVQTVIPYYNRFMAQ 69
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E + +G Y ++ + + ++N++ K PQT L L GI
Sbjct: 70 FPTVEALAAAPEATVLKAWEGLGYYS-RARRLQQAAKQIVNDYGGKWPQTAAELQTLAGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG +D + FR+ R+ + + +I P +
Sbjct: 129 GPYTAGAIASISFGEVVPAIDGNAFRVFARLFKVDADIARPQTRKVFDDLIRPLMPKERP 188
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P +
Sbjct: 189 GDFNQAVMDLGSSYMSASHPDPAHSPVRAF 218
>gi|258507671|ref|YP_003170422.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus GG]
gi|257147598|emb|CAR86571.1| A/G-specific adenine glycosylase [Lactobacillus rhamnosus GG]
Length = 365
Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 9/210 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ P+++ + + L + + + ++V+ L+ Q+ V
Sbjct: 3 WPPEKVAAFQHALLDWYDHHARTLPWRQDHDPYHVMVSELMLQQTQVQTVIPYYNRFMAQ 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + A E + +G Y ++ + + ++N++ K PQT L L GI
Sbjct: 63 FPTVEALAAAPEATVLKAWEGLGYYS-RARRLQQAAKQIVNDYGGKWPQTAAELQTLAGI 121
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII----PPKHQ 191
G A I S++FG +D + FR+ R+ + + +I P +
Sbjct: 122 GPYTAGAIASISFGEVVPAIDGNAFRVFARLFKVDADIARPQTRKVFDDLIRPLMPKERP 181
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ + ++ G A P +
Sbjct: 182 GDFNQAVMDLGSSYMSASHPDPAHSPVRAF 211
>gi|164658303|ref|XP_001730277.1| hypothetical protein MGL_2659 [Malassezia globosa CBS 7966]
gi|159104172|gb|EDP43063.1| hypothetical protein MGL_2659 [Malassezia globosa CBS 7966]
Length = 625
Score = 91.1 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 14/196 (7%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ E + + + R +G Y +
Sbjct: 117 RRAYEVWISEIMLQQTRVETARSYWLKWIEAWPSIDALADASVDDVLAAWRGLGYYGRAR 176
Query: 106 ENIISL--SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ + E ++PG+G A I S+ FG +D ++ R+
Sbjct: 177 RIHEAAQKIMHDPSMKGQWPEYAHELCEKIPGVGPYTAGAISSIVFGHAVPILDGNVARV 236
Query: 164 SNRIGLAPGKTPNK---------VEQSLLRIIPPKH---QYNAHYWLVLHGRYVCKARKP 211
+R +K + + P + L+ G +C +P
Sbjct: 237 LSRQTGLYADPRSKSTNDLLWYMARMLVEHVAPNHRSDVPGRWNQGLMELGSTLCTPTRP 296
Query: 212 QCQSCIISNLCKRIKQ 227
C +C I + C +
Sbjct: 297 ACDTCPIQSTCAVYAE 312
>gi|329943266|ref|ZP_08292040.1| hhH-GPD superbase excision DNA repair family protein [Chlamydophila
psittaci Cal10]
gi|313848417|emb|CBY17421.1| putative DNA repair protein [Chlamydophila psittaci RD1]
gi|328814813|gb|EGF84803.1| hhH-GPD superbase excision DNA repair family protein [Chlamydophila
psittaci Cal10]
Length = 219
Score = 91.1 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I +P P+ L + F L+VA+LLS STD VN T LF +A Q ++
Sbjct: 9 NFILSTLDELFPDPQPSLTGWRTPFQLLVAILLSGNSTDKAVNAVTPRLFSLAPDAQTLV 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + L + I G+ R+K+ + +L+ IL+ ++ + P +LE LT+LPG+GRK A+V
Sbjct: 69 QLPLENLYSLISPCGLGRRKAAYLHNLAKILLEKYTGEPPASLELLTQLPGVGRKTASVF 128
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + + IPT VDTHI R+S R G++ ++P+ E+ L+ + H L+ + R
Sbjct: 129 LGIIYKIPTFPVDTHILRLSQRWGISNKRSPSAAEKDLVLFFGESNSPKLHLQLIYYARE 188
Query: 205 VCKARKPQCQSCIISNL 221
C A C I
Sbjct: 189 YCPALYHDTNKCKICAY 205
>gi|226499382|ref|NP_001151454.1| endonuclease III-like protein 1 [Zea mays]
gi|195646916|gb|ACG42926.1| endonuclease III-like protein 1 [Zea mays]
Length = 364
Score = 91.1 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++S+Q+ D + A + L E P ++ E L N I+ +G Y++K++
Sbjct: 162 FAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQF 221
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
I S I + F IP +L L L G+G K A++++S+A+ I VDTH+ RISNR
Sbjct: 222 IKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNR 281
Query: 167 IGLAP-------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G TP + SL + +P + LV G+ +C +P+C C I+
Sbjct: 282 LGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDKCGIN 341
Query: 220 NLCKR-IKQ 227
NLC K+
Sbjct: 342 NLCPSAFKE 350
>gi|328777513|ref|XP_623602.3| PREDICTED: endonuclease III-like protein 1-like [Apis mellifera]
Length = 354
Score = 91.1 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A++LS+Q+ D + A + L TP+ + + L I +G +++K E I
Sbjct: 164 YQSLIALMLSSQTKDQVTHAAMQRLITYGCTPEIIAGTPDDTLGKLIYPVGFWKRKVEYI 223
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ ILI+++D+ IP+TL+ L +L G+G K A++ + +A+G + VDTH+ RI NR+
Sbjct: 224 KKTTTILIDKYDSDIPKTLKELCQLSGVGPKMAHICMQIAWGEVSGIGVDTHVHRICNRL 283
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P KTP ++ +P +Y LV G+ +C R P+C C+ ++C
Sbjct: 284 GWVKKPTKTPEDTRIAVEEWLPRNLWSEINYLLVGFGQEICLPRFPKCDECLNKDICPFT 343
Query: 226 K 226
K
Sbjct: 344 K 344
>gi|167718023|ref|ZP_02401259.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei DM98]
Length = 286
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|86149450|ref|ZP_01067681.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596771|ref|ZP_01100008.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218563209|ref|YP_002344989.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|85840232|gb|EAQ57490.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88191612|gb|EAQ95584.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360916|emb|CAL35717.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|284926815|gb|ADC29167.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315927633|gb|EFV06964.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315930905|gb|EFV09889.1| A/G-specific adenine glycosylase [Campylobacter jejuni subsp.
jejuni 305]
Length = 339
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
KELE++ L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V + + T + + E +L + +G Y ++ N+ + +++F K
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYT-RARNLKKAALECVDKFGAK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ +E L +L GIG A I + VD +I R+ +R+ + ++E+
Sbjct: 120 LPKDVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ H ++ + L+ G VC + +C+ C + + C+
Sbjct: 180 KELLNLNHAFDHNQALLDIGALVCVGKNAKCRICPLYDFCQ 220
>gi|258543594|ref|YP_003189027.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-01]
gi|256634672|dbj|BAI00648.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-01]
gi|256637728|dbj|BAI03697.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-03]
gi|256640782|dbj|BAI06744.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-07]
gi|256643837|dbj|BAI09792.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-22]
gi|256646892|dbj|BAI12840.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-26]
gi|256649945|dbj|BAI15886.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-32]
gi|256652935|dbj|BAI18869.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655989|dbj|BAI21916.1| DNA glycosylase A/G-specific MutY [Acetobacter pasteurianus IFO
3283-12]
Length = 357
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 17/210 (8%)
Query: 32 FSLKWPSPKGELYYV-------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L + + + + ++ ++ Q+T V E T Q +
Sbjct: 9 LLHWYDRHRRTLPWRVVGQSHPDPYRVWLSEIMLQQTTVKAVAPYYLRFTEKFPTVQALA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + + +G Y + + PQ ++GL LPGIG A +
Sbjct: 69 SADREDVLAAWAGLGYYSRARNLH---ACAQAVVALGGFPQDVQGLRVLPGIGPYTAAAV 125
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-------PPKHQYNAHYW 197
++AFG+P + VD ++ R++ R+ P ++ I + +
Sbjct: 126 AAIAFGVPVVPVDGNVERVTARLFAITEPLPPARKKLAQLAITLNADREAQERPSDFAQA 185
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L G +C R P C C C KQ
Sbjct: 186 LFDLGSSLCSPRAPACGLCPWQGECAGHKQ 215
>gi|261367259|ref|ZP_05980142.1| A/G-specific adenine glycosylase [Subdoligranulum variabile DSM
15176]
gi|282570861|gb|EFB76396.1| A/G-specific adenine glycosylase [Subdoligranulum variabile DSM
15176]
Length = 342
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 9/209 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L I + + K L + + + + V+ ++ Q+ P
Sbjct: 2 LRPIAPPLLQWFQANKRLLPFRQEPSAYHIWVSEIMLQQTRVAAAIPYYNRFIAALPDPA 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + L+ + +G Y + N+ + I+ ++ +P + L LPGIG A
Sbjct: 62 ALASCEPDALRKLWQGLGYYN-RVNNMQKAARIVCEQYGGDLPSDYDALRSLPGIGDYTA 120
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHY 196
I S+AFGIP VD ++ R+ R+ + +L +P + +
Sbjct: 121 GAIASIAFGIPAPAVDGNVLRVFARLYNDDADIMQPATKRLFTGRVLEQMPKETPGPYNE 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ G VC P+C++C ++ LC
Sbjct: 181 ALMELGALVCVPGMPRCEACPLAALCLGY 209
>gi|28875485|gb|AAO59966.1| MutY [uncultured bacterium]
Length = 347
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V V + Q + A + +G Y ++
Sbjct: 28 QDPYRVWLSEVMLQQTQVVTVIDYYARFLQRFPDVQALAAAPLDDVLALWSGLGYYS-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ + ++ + + P++ E L LPGIGR A I + FG +D ++ R+
Sbjct: 87 RHLHRCAQAVVVQHGGEFPRSSEMLATLPGIGRSTAAAIAAFCFGERVAILDGNVKRVLT 146
Query: 166 R-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R L+ + ++P + L+ G +C R+PQC +C +
Sbjct: 147 RALGFGDDLSRPANERALWAQAQTLLPAQGITAYTQGLMDLGAGICTLRRPQCAACPLQP 206
Query: 221 LC 222
+C
Sbjct: 207 VC 208
>gi|186475089|ref|YP_001856559.1| A/G-specific adenine glycosylase [Burkholderia phymatum STM815]
gi|184191548|gb|ACC69513.1| A/G-specific adenine glycosylase [Burkholderia phymatum STM815]
Length = 369
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 14/205 (6%)
Query: 31 LFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + +
Sbjct: 24 RLIAWQREHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYARFLARFPDVAALASA 83
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y ++ N+ + +++ + + P++++ L LPGIGR A I S
Sbjct: 84 PADDVMTLWAGLGYYT-RARNLHRCAQVVVEQHGGRFPESVDALAELPGIGRSTAAAIAS 142
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYW 197
AFG +D ++ R+ R+ G KVE + ++P
Sbjct: 143 FAFGARATILDGNVKRVLARVFGVEGYPGEKKVENGMWLLAESLLPVNATDDDISAYTQG 202
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C C + C
Sbjct: 203 LMDFGATLCARGKPDCVRCPFAVDC 227
>gi|108864224|gb|ABA92590.2| Endonuclease III-like protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 362
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++S+Q+ D + A + L E P ++ E L N I+ +G Y++K++
Sbjct: 160 FAVLISTMMSSQTKDEVTHAAVERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKF 219
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
I S I + F IP +L L L G+G K A++++S+A+ I VDTH+ RISNR
Sbjct: 220 IKEASKICLERFGGDIPDSLNELLALKGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNR 279
Query: 167 IGLAP-------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G TP + SL + +P + LV G+ +C +P+C C I+
Sbjct: 280 LGWVFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDMCGIN 339
Query: 220 NLCKR-IKQ 227
N+C K+
Sbjct: 340 NICPSAFKE 348
>gi|193215044|ref|YP_001996243.1| HhH-GPD family protein [Chloroherpeton thalassium ATCC 35110]
gi|193088521|gb|ACF13796.1| HhH-GPD family protein [Chloroherpeton thalassium ATCC 35110]
Length = 227
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 17/224 (7%)
Query: 20 YTPKELEEIFYLFSLKWPSP---KGELYYVNHFTL-----IVAVLLSAQSTDVNVNKATK 71
+++ E+ + P + E N F +V +LS + D N ++A
Sbjct: 1 MITQKIHELTRQLESIYGEPAARREEAEGSNCFQSTLLDELVGTILSQNTNDRNSSRAFA 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNK 122
L +L ++ I G+ +K++ I ++ L+ D
Sbjct: 61 SLKSEFPEWAILLDAPVAEIAKSIEIGGLANQKAQRIKAILQELVRTQGALSLDFLADFS 120
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
LE LT G+G K A +L G VDTHI RI NR+G+ K ++ L
Sbjct: 121 DKAVLEFLTSFKGVGVKTAGCVLLFGLGRDVCPVDTHIHRILNRLGIFSTKHADETFAEL 180
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
IP Y+ H L+ HG+ VC ARKP CQ+C+++ C+ +
Sbjct: 181 QPHIPTGKAYSLHVNLIRHGKRVCCARKPNCQTCMLAEDCEFAR 224
>gi|330823575|ref|YP_004386878.1| A/G-specific adenine glycosylase [Alicycliphilus denitrificans
K601]
gi|329308947|gb|AEB83362.1| A/G-specific adenine glycosylase [Alicycliphilus denitrificans
K601]
Length = 352
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + ++ A + ++ +G Y ++
Sbjct: 30 RDAYRVWLSEIMLQQTQVATVLEYYARFLARFPDVVQLAAAPQDEVLALWSGLGYYS-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I++ + + P+T+ L LPGIGR A I + FG +D ++ R+
Sbjct: 89 RNLHRCAQIVVQQHGGRFPRTVPELAALPGIGRSTAGAIAAFCFGERAAILDANVRRVLT 148
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSC 216
R+ LA K ++ + ++P + L+ G +C R P C C
Sbjct: 149 RVLGFRADLAEAKNERELWRLAEALLPKGDLHAAMPRYTQGLMDLGAGICLPRNPSCMLC 208
Query: 217 IISNLC 222
+ N+C
Sbjct: 209 PLQNVC 214
>gi|242084784|ref|XP_002442817.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
gi|241943510|gb|EES16655.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
Length = 367
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++S+Q+ D + A + L E P ++ E L N I+ +G Y++K++
Sbjct: 165 FAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQF 224
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
I S I + F IP +L L L G+G K A++++S+A+ I VDTH+ RISNR
Sbjct: 225 IKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNR 284
Query: 167 IGLAP-------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G TP + SL + +P + LV G+ +C +P+C +C I+
Sbjct: 285 LGWVFREGTKQKTTTPEQTRISLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDNCGIN 344
Query: 220 NLCKR-IKQ 227
NLC K+
Sbjct: 345 NLCPSAFKE 353
>gi|302553208|ref|ZP_07305550.1| A/G-specific adenine glycosylase [Streptomyces viridochromogenes
DSM 40736]
gi|302470826|gb|EFL33919.1| A/G-specific adenine glycosylase [Streptomyces viridochromogenes
DSM 40736]
Length = 313
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ + Q+ V + P +
Sbjct: 33 DWFGENARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLTRWPRPADLAKEAPG 92
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 93 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPADHAQLLALPGIGEYTAAAVASFAY 151
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQY--NAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + G
Sbjct: 152 GQRHAVLDTNVRRVFARAVTGVQYPPNATTAAERKLARALLPKDESTAARWAAASMELGA 211
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ C C I+ C
Sbjct: 212 LVCTAKSESCHRCPIAAQC 230
>gi|317123792|ref|YP_004097904.1| A/G-specific DNA-adenine glycosylase [Intrasporangium calvum DSM
43043]
gi|315587880|gb|ADU47177.1| A/G-specific DNA-adenine glycosylase [Intrasporangium calvum DSM
43043]
Length = 318
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 84/215 (39%), Gaps = 18/215 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+E + + + L + + + ++++ +++ Q+ V + E TP
Sbjct: 23 MERLRRRVNGWYAQAGRALPWREQDCSPWGVLLSEVMAQQTPLSRVEPVWRDWMEHWPTP 82
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ A + +G R+ + + ++ ++P T L LPG+G
Sbjct: 83 SSLAAAAPGEAVRAWGRLGYPRRALRLHEAATVMV-ERHRGEVPNTPAELLALPGVGAYT 141
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH------ 190
A + S AF IP + VDT++ R+ R + ++ + +P +
Sbjct: 142 AAAVASFAFRIPEVVVDTNVRRVLARTVEGKALPHVTLTRAESDLALRAMPAQRHTAPSA 201
Query: 191 ---QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC AR P+C C +++LC
Sbjct: 202 RAEANVWNVAVMELGALVCVARGPRCADCPVADLC 236
>gi|269955202|ref|YP_003324991.1| HhH-GPD family protein [Xylanimonas cellulosilytica DSM 15894]
gi|269303883|gb|ACZ29433.1| HhH-GPD family protein [Xylanimonas cellulosilytica DSM 15894]
Length = 581
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 11/207 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + +L + + ++V+ ++ Q+ V V A + E TP
Sbjct: 294 RALVERVVRWFDGARRDLPWRAADRTPWGVLVSEVMLQQTPVVRVEPAWRAWMERWPTPS 353
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + +G R+ + + +L+ D +P L LPG+G A
Sbjct: 354 DLAAASTADVLRAWDRLGYPRRALR-LQECARVLVERHDGAVPDDEAALRALPGVGEYTA 412
Query: 142 NVILSMAFGIPTIGVDTHIFRISNR----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
+ + AFG + VDT++ R+ R + L + ++P A +
Sbjct: 413 AAVRAFAFGRRAVVVDTNVRRVLARAVGGVALPAPSPTAAERATATAVVPHDDDAAAAWA 472
Query: 198 L--VLHGRYVCKARKPQCQSCIISNLC 222
+ G VC AR P+C C + +LC
Sbjct: 473 AASMELGALVCTARSPRCAECPVRDLC 499
>gi|209879798|ref|XP_002141339.1| HhH-GDP family base excision DNA repair protein [Cryptosporidium
muris RN66]
gi|209556945|gb|EEA06990.1| HhH-GDP family base excision DNA repair protein, putative
[Cryptosporidium muris RN66]
Length = 199
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V+ LLS+Q+ D + L + TPQ + + L + +G + K++ +
Sbjct: 8 FHILVSTLLSSQTKDESTAACMNRLKKHGLTPQIICEMSIDSLTKILYGVGFHNNKAKYL 67
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+S I+I + K+P E L LPGIG K AN++L AF I VDTH+ RI NRI
Sbjct: 68 KEVSKIIIESYSGKVPDKYEQLISLPGIGPKMANLVLQTAFNKVNGISVDTHMHRIFNRI 127
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G K+PN+ + + + +P + + V G+ +C+ P+C C+I LC ++
Sbjct: 128 GWVKTKSPNETKYHMEKRLPHSYWRLVNKVFVGFGQIICRPVNPKCSECVIRALCSHGRR 187
>gi|150400428|ref|YP_001324195.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
gi|150013131|gb|ABR55583.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
Length = 356
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+ LSA++ D K +K+LF + P+ +L I +L+ + G Y+ KS+N
Sbjct: 38 AFKILVSTSLSARTKDETTAKVSKNLFRVIQNPEDLLNIPINELEKLVYPAGFYKTKSKN 97
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L IL+ ++++KIP +++ L +LPG+GRK AN+++++AF I VDTH+ RI+NR+
Sbjct: 98 LKELGKILVEKYNSKIPNSIDELVKLPGVGRKTANLVMTLAFSEDAICVDTHVHRITNRL 157
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCKRI 225
K PN+ E +L + +P K+ + LV+ G+ +C P+C SC I +C
Sbjct: 158 NYVDTKNPNETEMALRKKLPKKYWKQINNSLVIFGQDICGFV-PKCSSCFPEIKKICPYY 216
>gi|302521036|ref|ZP_07273378.1| LOW QUALITY PROTEIN: A/G-specific adenine glycosylase [Streptomyces
sp. SPB78]
gi|302429931|gb|EFL01747.1| LOW QUALITY PROTEIN: A/G-specific adenine glycosylase [Streptomyces
sp. SPB78]
Length = 321
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P +
Sbjct: 31 AWYEANARDLPWRRPEAGAWGVMVSEFMLQQTPVARVLPVYEEWMRRWPRPADLAKEPSG 90
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P+ L LPGIG A + S A+
Sbjct: 91 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPEHHAQLLALPGIGEYTAAAVASFAY 149
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + R+ +P + G
Sbjct: 150 GQRHAVLDTNVRRVLARAVSGEQFPPNATTAAERRLARSVLPEDEDTAARWAAASMELGA 209
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ +C+SC +S+ C
Sbjct: 210 LVCTAKGERCESCPLSDRC 228
>gi|300121249|emb|CBK21630.2| unnamed protein product [Blastocystis hominis]
Length = 350
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSA 59
S + + S L +TPK+ + P E +V +T V+ ++
Sbjct: 57 KTSSKTAKNQSSLTSFFTPKKRK------VESKPEEAQEYDFVKNGITGYTEYVSEIMLQ 110
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V + T + + E+++ + +G YR+ ++ + ++
Sbjct: 111 QTRVDTVIDKYIQWMQHFPTIKSLSEATEEEVNSLWSGLGYYRRAQ-YLVKGARYIMEHC 169
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-- 177
+ +IP T E L ++PG+G A ILS+AF P VD ++ R+ +R+ K
Sbjct: 170 NGEIPSTKEELQKVPGVGDYTAGAILSIAFNKPEAAVDGNVMRVLSRLRAVYQIKTQKEF 229
Query: 178 ---VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ +++ + ++ G VC + P C SC + CK K
Sbjct: 230 IQWCWKTAEQLVAHAPPSDYTQGIMELGAVVCTPQSPSCSSCPLREFCKAAK 281
>gi|167835382|ref|ZP_02462265.1| A/G-specific adenine glycosylase [Burkholderia thailandensis
MSMB43]
Length = 368
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHGLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVELHGGAFPGSPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPP----KHQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G +K VE + + +P L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRVENEMWALAEALLPDVAEQADVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 212 RGKPDCARCPFAGDC 226
>gi|291452152|ref|ZP_06591542.1| adenine glycosylase [Streptomyces albus J1074]
gi|291355101|gb|EFE82003.1| adenine glycosylase [Streptomyces albus J1074]
Length = 301
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + + ++V+ + Q+ V + P + A
Sbjct: 21 AWFEQHARDLPWRDPDAGAWAVMVSEFMLQQTPVNRVLPVYEQWMARWPRPADLAAEAPG 80
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 81 EAVRAWGRLGYPRRALR-LHGAAVAIAERHGGDVPAEHAQLLALPGIGEYTAAAVASFAY 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP--PKHQYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + + G
Sbjct: 140 GQRHAVLDTNVRRVLARAVSGVQYPPNATTAAERRLARELLPERDETAARWAAASMELGA 199
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR C C +++ C
Sbjct: 200 LVCTARNESCARCPLASRC 218
>gi|289579732|ref|YP_003478198.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|289529285|gb|ADD03636.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
Length = 309
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 8/210 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P + E + + + + + + ++V+ ++S Q+ V +A + E
Sbjct: 13 PDDCESVRDALIAWYEDDHRDFPWRRTDDPYEILVSEVMSQQTQLGRVVEAWEEFLERWP 72
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ + A + + + Y +++ + + + E+ P+T + L L G+G
Sbjct: 73 STADLEAADRADVVGFWTGHSLGYNNRAKYLHEAAAQVETEYGGTFPETPDELQELMGVG 132
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
AN + S AF VDT++ R+ R P E+ ++P +
Sbjct: 133 PYTANAVASFAFNNGDAVVDTNVKRVLYRAFDVPDDD-AAFEEVATDLMPDGRSRVWNNA 191
Query: 198 LVLHGRYVCKARKPQCQS--CIISNLCKRI 225
++ G C + P C C C
Sbjct: 192 IMELGGVAC-EQTPSCDEAGCPWREWCSAY 220
>gi|319761704|ref|YP_004125641.1| a/g-specific adenine glycosylase [Alicycliphilus denitrificans BC]
gi|317116265|gb|ADU98753.1| A/G-specific adenine glycosylase [Alicycliphilus denitrificans BC]
Length = 352
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + ++ A + ++ +G Y ++
Sbjct: 30 RDAYRVWLSEIMLQQTQVATVLEYYARFLARFPDVVQLAAAPQDEVLALWSGLGYYS-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I++ + + P+T+ L LPGIGR A I + FG +D ++ R+
Sbjct: 89 RNLHRCAQIVVQQHGGRFPRTVPELAALPGIGRSTAGAIAAFCFGERAAILDANVRRVLT 148
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQY----NAHYWLVLHGRYVCKARKPQCQSC 216
R+ LA K ++ + ++P + L+ G +C R P C C
Sbjct: 149 RVLGFRADLAEAKNERELWRLAEALLPKGDLHAAMPRYTQGLMDLGAGICLPRNPSCMLC 208
Query: 217 IISNLC 222
+ N+C
Sbjct: 209 PLQNVC 214
>gi|296128424|ref|YP_003635674.1| HhH-GPD family protein [Cellulomonas flavigena DSM 20109]
gi|296020239|gb|ADG73475.1| HhH-GPD family protein [Cellulomonas flavigena DSM 20109]
Length = 315
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + ++V+ ++ Q+ V V A + P + A
Sbjct: 27 WFDAHARDLPWRAPDRTPWGVLVSEVMLQQTPVVRVEPAWRAWMARWPGPADLAAAPTAD 86
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G R+ + + ++ +P+ E L LPG+G A + + AFG
Sbjct: 87 VLRAWDRLGYPRRAL-WLQECARTVVERHGGVLPEDEEALLALPGVGPYTAAAVRAFAFG 145
Query: 151 IPTIGVDTHIFRISNRIGLA---PGKTPNKVE-QSLLRIIPPKHQYNAHYWL--VLHGRY 204
++ +DT++ R+ R+ P T + E + +P A + + G
Sbjct: 146 RRSVVLDTNVRRVLARVAAGVALPAPTQSAAETRLAAAWVPDDDAGAARWSAAAMELGAL 205
Query: 205 VCKARKPQCQSCIISNLCKRI 225
VC AR P+C +C ++ C+ +
Sbjct: 206 VCTARAPRCDACPVAERCRWL 226
>gi|170691499|ref|ZP_02882664.1| A/G-specific adenine glycosylase [Burkholderia graminis C4D1M]
gi|170143704|gb|EDT11867.1| A/G-specific adenine glycosylase [Burkholderia graminis C4D1M]
Length = 382
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 14/205 (6%)
Query: 31 LFSLK-WPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ +L + + + + ++ ++ Q+ V + A
Sbjct: 33 RLVAWQRKHGRHDLPWQNTRDAYRIWLSEIMLQQTQVSTVIPYYAKFLARFPDVAALAAA 92
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
+ +G Y ++ N+ + +++ ++ P +++ L LPGIGR A I S
Sbjct: 93 PVDDVMALWAGLGYYT-RARNLHRCAQVVVQQYGGAFPASVDELAELPGIGRSTAAAIAS 151
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYW 197
AFG +D ++ R+ R+ G KVE ++ ++P
Sbjct: 152 FAFGARATILDGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDDEVSAYTQG 211
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP C C + C
Sbjct: 212 LMDLGATLCVRGKPDCLRCPFAADC 236
>gi|18075686|emb|CAD11253.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ V + F A
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E ++++P + L +LPGIG
Sbjct: 61 FPTLKDLASAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F + VD +I R+ GL P T ++ + +N +
Sbjct: 121 AYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLNLNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 181 ALIDLGALICSP-KPKCAICPLNPYC 205
>gi|330933705|ref|XP_003304261.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
gi|311319189|gb|EFQ87616.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
Length = 391
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKS 105
F ++A++LS+Q+ D + +++ E + ++ + L +I +G + K+
Sbjct: 144 FQTLIALMLSSQTKDTVLAPVMRNMQEKMPGGFNLESVLALEPPALNAFINKVGFHNLKT 203
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRIS 164
+ I + IL +++++ IP +EGL LPG+G K + LS A+G VD H+ RI
Sbjct: 204 KYIKQTAEILRDKWNSDIPDNIEGLISLPGVGPKMGYLCLSAAWGRTEGIGVDVHVHRIV 263
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN--LC 222
N +TP + +L +P + + + LV G+ +C +C +C +++ LC
Sbjct: 264 NLWKWHKTQTPEQTRAALESWLPKEKWHGINNLLVGFGQTICLPVGRKCGNCKLADRGLC 323
Query: 223 K 223
Sbjct: 324 P 324
>gi|189219364|ref|YP_001940005.1| A/G-specific DNA glycosylase [Methylacidiphilum infernorum V4]
gi|189186222|gb|ACD83407.1| A/G-specific DNA glycosylase [Methylacidiphilum infernorum V4]
Length = 355
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ + S + + + ++++V+ + Q+ V E +
Sbjct: 20 KKFWKFLSRWYGENGFKYPWRKSPTPYSVVVSEFMLQQTQAETVVPYFLAWMEKFPDWES 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ EK++ +G Y ++ N+ ++ +L +E ++P E L + PGIG AN
Sbjct: 80 LAKAQEKEVLRAWEGLGYYS-RARNLHRIAVMLYHERKGELPSDPEELVKFPGIGPYTAN 138
Query: 143 VILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIP-----PKHQYNAHY 196
+ S+AFG +D ++ R+ R + + + +++ +++ +
Sbjct: 139 AVASLAFGRKIPALDGNVIRVMARLMNINQPIHKKETIRTIFQVVDSLMQGEAEASLFNS 198
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ GR VCK + P+C +C++ +CK +
Sbjct: 199 ALMDFGRAVCKPKYPRCSACVLKEMCKAKQ 228
>gi|167814147|ref|ZP_02445827.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 91]
Length = 271
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|115352908|ref|YP_774747.1| A/G-specific adenine glycosylase [Burkholderia ambifaria AMMD]
gi|115282896|gb|ABI88413.1| A/G-specific DNA-adenine glycosylase [Burkholderia ambifaria AMMD]
Length = 368
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 79/232 (34%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLIAWQRTHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 56 QTQVSTVIPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYS-RARNLHRCAQVVVAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K V
Sbjct: 115 GGVFPPTPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANEADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|322824281|gb|EFZ29733.1| A/G-specific adenine glycosylase, putative [Trypanosoma cruzi]
Length = 451
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + V ++S Q+ V + I T + E+ ++ +G YR+
Sbjct: 47 RNPYHVWVCEVMSQQTQMGTVISYFQRWVSIFPTVAVLAEASEESVKTAWSGLGYYRRAL 106
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + ++ F+ K+P T L ++PGIG A I S+ FG VD ++ R+
Sbjct: 107 -YLKKGAEYVMKHFNGKLPVTAVELQQIPGIGPYTAAAISSICFGEKVASVDGNVVRVIT 165
Query: 166 RIGLAPGKTP------NKVEQSLLRII---PPKHQYNAHYWLVLHGRYVCKAR-KPQCQS 215
R+ P V+Q ++ P ++ + L+ G VCK +P C+
Sbjct: 166 RLRCEREVDPKAAKTIKAVKQWAQELMDEGPCENPGAFNEGLMKIGSSVCKPSGRPLCEE 225
Query: 216 CIISNLCKRI 225
C + CK
Sbjct: 226 CPLQRFCKSY 235
>gi|320169582|gb|EFW46481.1| endonuclease III-like protein 1 [Capsaspora owczarzaki ATCC 30864]
Length = 412
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LSAQ+ D A K L T +LA K+Q I +G +R+K+E I
Sbjct: 194 YQVLLSLMLSAQTKDEITAGAMKRLIAHGCTLDNILATPVDKIQELIYPVGFHRRKAEYI 253
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ S +L + F IP T+EGL L G+G K A++ + +A+ VDTH+ RI+NR+
Sbjct: 254 LETSQMLKDSFHGDIPSTIEGLVSLKGVGPKMAHITMDVAWQQMVGLGVDTHVHRIANRL 313
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP ++L +P ++ + LV G+ +C+ P+C C+ + C
Sbjct: 314 KWVSKETKTPEDTRKALQEWMPREYWPGLNVLLVGFGQTICRPVNPRCWDCLNLHTCAFA 373
Query: 226 KQ 227
++
Sbjct: 374 RR 375
>gi|126466261|ref|YP_001041370.1| HhH-GPD family protein [Staphylothermus marinus F1]
gi|126015084|gb|ABN70462.1| HhH-GPD family protein [Staphylothermus marinus F1]
Length = 228
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNH-----FTLIVAVLLSAQSTDVNVNKATKHLFEIA--D 78
EEI + + E N F I+ V+LS ++D N +A +L +I
Sbjct: 7 EEIISILRKHYKLNLKEFIAPNIRDKSLFEYIIGVMLSQNTSDKNAIRAYLNLKKIYGEI 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI----------PQTLE 128
TP+K+L+ +KL ++ G+Y ++++ I+ L+ I + + +
Sbjct: 67 TPEKILSTSIEKLVEALKPAGMYNQRAQRIVELAKIFTERNVKEELRKLVEEGKLREARK 126
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L LPG+G K A+V+L M + P VDTHI R+S R+G + + ++ + P
Sbjct: 127 YLVNLPGVGLKTADVVLLMYYKQPVFPVDTHIRRVSKRLGYIEKDNYETISRWWMKQLKP 186
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
AH L+ HGR CKARKP C C I+ CK
Sbjct: 187 NEYLEAHLLLITHGRKTCKARKPLCDKCPINKYCKYY 223
>gi|239980288|ref|ZP_04702812.1| adenine glycosylase [Streptomyces albus J1074]
Length = 346
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + + ++V+ + Q+ V + P + A
Sbjct: 66 AWFEQHARDLPWRDPDAGAWAVMVSEFMLQQTPVNRVLPVYEQWMARWPRPADLAAEAPG 125
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 126 EAVRAWGRLGYPRRALR-LHGAAVAIAERHGGDVPAEHAQLLALPGIGEYTAAAVASFAY 184
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIP--PKHQYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + + G
Sbjct: 185 GQRHAVLDTNVRRVLARAVSGVQYPPNATTAAERRLARELLPERDETAARWAAASMELGA 244
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR C C +++ C
Sbjct: 245 LVCTARNESCARCPLASRC 263
>gi|82701213|ref|YP_410779.1| A/G-specific adenine glycosylase [Nitrosospira multiformis ATCC
25196]
gi|82409278|gb|ABB73387.1| A/G-specific DNA-adenine glycosylase [Nitrosospira multiformis ATCC
25196]
Length = 383
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 17/218 (7%)
Query: 25 LEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ L + + +++ ++ ++ Q+ V + +
Sbjct: 12 ANSFATRLIRWQREHGRHHLPWQNTRDAYSIWLSEIMLQQTQVGTVIPYYRRFLQCFPDI 71
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + ++ +G Y ++ N+ + ++ E P+ + + +LPGIGR
Sbjct: 72 QSLASAPLDEVMVQWSGLGYYS-RARNLHKAAQRIVGEHGGIFPEEVAIIRQLPGIGRST 130
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPP------- 188
A I AFG +D ++ RI +R G K + Q ++P
Sbjct: 131 AAAIAVFAFGKRAAILDGNVKRILSRCFGIEGYPGEKQVEAQLWQKAEALLPKGDESPIE 190
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ L+ G +C +P C SC + C +
Sbjct: 191 RDIEGYTQALMDLGATICIRARPMCGSCPLRLECVAFR 228
>gi|42571353|ref|NP_973767.1| endonuclease-related [Arabidopsis thaliana]
gi|222423369|dbj|BAH19657.1| AT1G05900 [Arabidopsis thaliana]
gi|332189795|gb|AEE27916.1| endonuclease III [Arabidopsis thaliana]
Length = 386
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 23/248 (9%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYY-------------VNHF 49
S++ S S G P+ E++ PS + + F
Sbjct: 122 STEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERRF 181
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+++ LLS+Q+ + A + L + TP+ + E ++ I +G Y +K+ N+
Sbjct: 182 YVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNV 241
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
++ I + E+D IP+TLE L LPG+G K A+++L + + I VDTH+ RI NR+
Sbjct: 242 KKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRL 301
Query: 168 GLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
G +P + +L + +P ++ LV G+ +C +P C +C I+
Sbjct: 302 GWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSITE 361
Query: 221 LCKR-IKQ 227
+C K+
Sbjct: 362 ICPSAFKE 369
>gi|197122334|ref|YP_002134285.1| A/G-specific adenine glycosylase [Anaeromyxobacter sp. K]
gi|196172183|gb|ACG73156.1| A/G-specific adenine glycosylase [Anaeromyxobacter sp. K]
Length = 399
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 14/195 (7%)
Query: 35 KWPSPKGELYYV------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
W + L + + + + +A ++ Q+ V E T + + A +
Sbjct: 30 WWDAGHRPLPWRQPQRGADPYRVWLAEVMLQQTQVVTATPYWLRFVERWPTLEALAAARD 89
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y + + +P + L LPG G A + S+A
Sbjct: 90 EDVLAAWSGLGYY--ARCRNLLAAAREALRRHGGLPSGYDALRALPGFGPYTAGAVASIA 147
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-----PPKHQYNAHYWLVLHGR 203
F P VD ++ R+ +R+ L G + ++ + + + + + L+ G
Sbjct: 148 FAAPVPAVDGNVTRVLSRLFLVEGDPAARAARARVAALAAALVDRERPGDLNQALMELGA 207
Query: 204 YVCKARKPQCQSCII 218
VC+ P C C +
Sbjct: 208 TVCRP-SPDCARCPV 221
>gi|71892030|ref|YP_277760.1| adenine DNA glycosylase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796136|gb|AAZ40887.1| adenine DNA glycosylase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 349
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 74/187 (39%), Gaps = 8/187 (4%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ ++ ++ Q+ V + T +++ ++ +G Y ++
Sbjct: 29 KTMYKTWLSEIMLQQTQVKTVIFYYERFISKFPTIKQLATAELDEVLFLWSGLGYYV-RA 87
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + I++N + P+ + L PGIG+ A ILS+ +D+++ RI
Sbjct: 88 RNLHKTAKIIVNHYHGNFPKDFDTLVSFPGIGKSTAGAILSLTLDQHYPILDSNVKRILI 147
Query: 166 RIGLAPG-------KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R + NK+ + +++P + + ++ GR +C + P C C +
Sbjct: 148 RYYALDYSLSRNSSEVNNKLWLLIKQLLPNIGVADFNQAMMDLGRLICTSTYPLCNDCPL 207
Query: 219 SNLCKRI 225
C+
Sbjct: 208 REGCRSF 214
>gi|302870291|ref|YP_003838928.1| HhH-GPD family protein [Micromonospora aurantiaca ATCC 27029]
gi|302573150|gb|ADL49352.1| HhH-GPD family protein [Micromonospora aurantiaca ATCC 27029]
Length = 304
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + ++V+ ++ Q+ V V A + P+ +
Sbjct: 16 SRWYERNARDLPWRKPGIGAWAILVSEVMLQQTPVVRVVPAWEAWLARWPEPRALAEDTP 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ +P L+ L LPG+G A + + A
Sbjct: 76 AEAIRMWGRLGYPRRAVR-LRECAAAIVERHGGVVPDRLDQLLALPGVGTYTARAVAAFA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIP--PKHQYNAHYWLVLHG 202
+G VDT++ R+ +R + ++P P A + G
Sbjct: 135 YGQRHPVVDTNVRRVVSRAIAGEPDAGPTTRPADLVATEELLPIEPADAALASAAFMELG 194
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 195 AVVCTARAPRCAICPVESSC 214
>gi|220917116|ref|YP_002492420.1| A/G-specific adenine glycosylase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954970|gb|ACL65354.1| A/G-specific adenine glycosylase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 401
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 14/195 (7%)
Query: 35 KWPSPKGELYYV------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
W + L + + + + +A ++ Q+ V E T + + A +
Sbjct: 32 WWDAGHRPLPWRQPQRGADPYRVWLAEVMLQQTQVVTATPYWLRFVERWPTLEALAAARD 91
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y + + +P + L LPG G A + S+A
Sbjct: 92 EDVLAAWSGLGYY--ARCRNLLAAAREALRRHGGLPSGYDALRALPGFGPYTAGAVASIA 149
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-----PPKHQYNAHYWLVLHGR 203
F P VD ++ R+ +R+ L G + ++ + + + + + L+ G
Sbjct: 150 FAAPVPAVDGNVTRVLSRLFLVEGDPAARAARARVAALAAALVDRERPGDLNQALMELGA 209
Query: 204 YVCKARKPQCQSCII 218
VC+ P C C +
Sbjct: 210 TVCRP-SPDCARCPV 223
>gi|303256253|ref|ZP_07342269.1| A/G-specific adenine glycosylase [Burkholderiales bacterium 1_1_47]
gi|331001314|ref|ZP_08324940.1| A/G-specific adenine glycosylase [Parasutterella excrementihominis
YIT 11859]
gi|302860982|gb|EFL84057.1| A/G-specific adenine glycosylase [Burkholderiales bacterium 1_1_47]
gi|329569041|gb|EGG50837.1| A/G-specific adenine glycosylase [Parasutterella excrementihominis
YIT 11859]
Length = 328
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 7/199 (3%)
Query: 33 SLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
++ + + +A ++ Q+ V E T Q + E+++
Sbjct: 13 QKEYGRNNLPWQQSHDPYVRWLAEIMLQQTQVKTVIPYFNRFMERFSTVQALAEAPEEEV 72
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+G Y ++ N+ + + F P L L LPGIG A I S A
Sbjct: 73 MKLWAGLGYYS-RARNLHKCAKEVQQRFGGCFPIELVDLESLPGIGVSTAAAIRSAATDE 131
Query: 152 PTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLR----IIPPKHQYNAHYWLVLHGRYVC 206
P +D ++ R+ R + G TP++ E+ L P + ++ G VC
Sbjct: 132 PCAILDGNVKRVLARHSMIGKGLTPSEAEKRLWADARAKTPQREGRTYAQAVMDLGATVC 191
Query: 207 KARKPQCQSCIISNLCKRI 225
KP C C ++ CK
Sbjct: 192 TRTKPLCFLCPVNQDCKAF 210
>gi|302543542|ref|ZP_07295884.1| putative A/G-specific adenine glycosylase [Streptomyces
hygroscopicus ATCC 53653]
gi|302461160|gb|EFL24253.1| putative A/G-specific adenine glycosylase [Streptomyces
himastatinicus ATCC 53653]
Length = 312
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E+ + + +L + + ++V+ + Q+ V + P
Sbjct: 25 ELHRPVIDWFDAHARDLPWRRPEAGAWGVMVSEFMLQQTPVSRVLPVYEQWLARWPRPAD 84
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ A + +G R+ + + + +P+ L LPG+G A
Sbjct: 85 LAAEPPGEAVRAWGRLGYPRRALR-LHGAAAAIRERHGGDVPEDHAQLLALPGVGEYTAA 143
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQYNAHYWL 198
+ S A+G +DT++ R+ R PN + ++P + + A +
Sbjct: 144 AVASFAYGQRHPVLDTNVRRVFARAIGGVQYPPNATTAAERKLARALLPDEERTAARWAA 203
Query: 199 --VLHGRYVCKARKPQCQSCIISNLC 222
+ G VC AR P C C I+ C
Sbjct: 204 ATMELGALVCTARTPDCARCPIAASC 229
>gi|295675409|ref|YP_003603933.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1002]
gi|295435252|gb|ADG14422.1| A/G-specific adenine glycosylase [Burkholderia sp. CCGE1002]
Length = 377
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + A +
Sbjct: 41 RHDLPWQSTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLGRFPDVAALAAAPSDDVMALWA 100
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++ P +++ L LPGIGR A I S AFG +
Sbjct: 101 GLGYYT-RARNLHRCAQVVVERHGGAFPVSVDELAELPGIGRSTAAAIASFAFGARATIL 159
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G KVE S+ ++P L+ G +C
Sbjct: 160 DGNVKRVLARVFGVEGFPGEKKVENSMWTLAESLLPSNASNAEVSAYTQGLMDLGATLCV 219
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 220 RGKPDCTRCPFAPDC 234
>gi|282600337|ref|ZP_06257553.1| A/G-specific adenine glycosylase [Providencia rustigianii DSM 4541]
gi|282565583|gb|EFB71118.1| A/G-specific adenine glycosylase [Providencia rustigianii DSM 4541]
Length = 317
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 71/174 (40%), Gaps = 6/174 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + + ++ + +G Y ++ N+ + ++
Sbjct: 1 MLQQTQVSTVIPYFEKFIQRFSDVTALANAPLDEVLHLWTGLGYYA-RARNLHKAAQVIA 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-P 175
+++ K P T E + LPG+GR A ILS++ +D ++ R+ R G
Sbjct: 60 TQYNGKFPTTFEEVNALPGVGRSTAGAILSLSQQQHFPILDGNVKRVLARCYAVGGWPGK 119
Query: 176 NKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+VE L ++ P + ++ G VC KP+C+ C +++ C
Sbjct: 120 KEVENRLWEISTKVTPAVEVEYFNQAMMDLGAMVCTRSKPKCELCPLNSGCVAY 173
>gi|296004674|ref|XP_966134.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
gi|225631743|emb|CAG25386.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
Length = 437
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++ +LS+++ D L + T +L E++L+ I IG Y K++ I
Sbjct: 245 FQTLISCMLSSRTKDEVTAMVMDKLKKHGLTVHNILNTTEEQLKKLIYGIGFYNVKAKQI 304
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + HIL N++++ IP T E L +LPGIG K A +IL A I VD H+ RI+NR+
Sbjct: 305 LQICHILKNKYNSDIPHTYEELKKLPGIGEKIAQLILQTALNKHEGIAVDIHVHRIANRL 364
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K + L + + ++ LV G+ +CK +KP C+ C ++N C+ +
Sbjct: 365 NWVNSKNELDTQMKLKSYVQKELWSEINHVLVGFGQVICKGKKPLCEKCTLTNKCQYYQ 423
>gi|194766301|ref|XP_001965263.1| GF24230 [Drosophila ananassae]
gi|190617873|gb|EDV33397.1| GF24230 [Drosophila ananassae]
Length = 395
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A L E +PQ + + ++L+ + + Y+ K++ +
Sbjct: 204 FQNLVALMLSSQTKDQTTFEAMNRLKERDLSPQTLNDMPVEELEGLLHPVSFYKNKAKYL 263
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
ILI ++D+ IP T + L LPG+G K A++ +++A+ T VD H+ R+SNR+
Sbjct: 264 KQTVQILIEKYDSDIPDTPKELKALPGVGPKMAHICMAVAWNKVTGIGVDVHVHRLSNRL 323
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P K P + +L + +P LV G+ +C KP C+ C+ ++C
Sbjct: 324 KWVPRPTKEPEQTRVALEKWLPYSLWSEVTPLLVGFGQTICTPLKPNCRECLNKDICPS 382
>gi|160894823|ref|ZP_02075597.1| hypothetical protein CLOL250_02373 [Clostridium sp. L2-50]
gi|156863254|gb|EDO56685.1| hypothetical protein CLOL250_02373 [Clostridium sp. L2-50]
Length = 365
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 10/210 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++I + +P +L + + + ++ ++ Q+ V + + + T +
Sbjct: 21 KQIADNLIVWYPEHARDLPWRKDKEPYHVWLSEIMLQQTRVEAVKEYYRTFLQELPTIEA 80
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + + +L +G Y ++ N+ + ++ E+ P + LPGIG A
Sbjct: 81 LAEVDDDRLMKLWEGLGYYN-RARNLKKAAGEVVIEWQGNFPAEYNEILSLPGIGEYTAG 139
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV--EQSLLRIIPPKHQYN---AHYW 197
I S+ F +PT VD ++ R+ R+ P + ++ ++ +
Sbjct: 140 AIGSICFDLPTPAVDGNVLRVYTRVMEDPSNIDKQAVKKKIREELLQVYRYGHCDMLTQS 199
Query: 198 LVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
L+ G +C P+C+ C + LCK K
Sbjct: 200 LMEVGATICLPNGAPKCEVCPLQELCKAHK 229
>gi|2127882|pir||E64376 endonuclease III - Methanococcus jannaschii
Length = 353
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++++ ++SA++ D + +K LF+ +L I E+KL + I G Y+ K+
Sbjct: 33 KDPFKVLISTIISARTKDEVTEEVSKKLFKEIKDVDDLLNIDEEKLADLIYPAGFYKNKA 92
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+ L+ IL ++ K+P +LE L +LPG+GRK AN+++++AF I VDTH+ RI N
Sbjct: 93 KNLKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLAFNKDGICVDTHVHRICN 152
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCK 223
R + +TP + E L + +P K+ + LV+ GR +C ++ +C C I C
Sbjct: 153 RWEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFGREICSSKS-KCDKCFKEIKEKCP 211
Query: 224 RIKQ 227
++
Sbjct: 212 YYEK 215
>gi|296161533|ref|ZP_06844338.1| A/G-specific adenine glycosylase [Burkholderia sp. Ch1-1]
gi|295888177|gb|EFG67990.1| A/G-specific adenine glycosylase [Burkholderia sp. Ch1-1]
Length = 353
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V T + A +
Sbjct: 17 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPTVAALAAAPSDDVMALWA 76
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++ + P ++E L LPGIGR A I S AFG +
Sbjct: 77 GLGYYT-RARNLHRCAQVVVEQHGGAFPASVEELAELPGIGRSTAAAIASFAFGARATIL 135
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLL----RIIP----PKHQYNAHYWLVLHGRYVCK 207
D ++ R+ R+ G KVE ++ ++P L+ G +C
Sbjct: 136 DGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDAEVSAYTQGLMDLGATLCV 195
Query: 208 ARKPQCQSCIISNLC 222
KP C C + C
Sbjct: 196 RGKPDCLRCPFAVDC 210
>gi|145296667|ref|YP_001139488.1| hypothetical protein cgR_2574 [Corynebacterium glutamicum R]
gi|140846587|dbj|BAF55586.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 256
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 4/174 (2%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
++S Q+ V + TP+ ++ +G R+ + + ++
Sbjct: 1 MMSQQTPVARVEPIWREWIAKWPTPESFANASTDEVLRAWGKLGYPRRALR-LKECAEVI 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ + ++P T+E L LPGIG A + + FG VDT++ R+ R
Sbjct: 60 VEKHAGEVPDTVEALLALPGIGDYTARAVAAFHFGQRVPVVDTNVRRVYQRAVAGRYLAG 119
Query: 176 NKVEQSLLR---IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+Q L+ ++P H ++ G +C A P+C +C + + C+ K
Sbjct: 120 PAKKQELIDVSLLLPNTHAPEFSAAIMELGALICTATSPKCDTCPLLDQCQWQK 173
>gi|224070218|ref|XP_002187233.1| PREDICTED: nth endonuclease III-like 1 [Taeniopygia guttata]
Length = 265
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++A++LS+Q+ D + A L + +L + ++ L I +G +R K + I
Sbjct: 83 YQVLLALMLSSQTKDQVTSAAMLRLRRRGLSVDSVLQMDDETLGQIIYPVGFWRNKVKYI 142
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ IL ++ IP T+E L +LPG+G K A++ + + + I VDTH+ RISNR+
Sbjct: 143 KQTTAILKQKYGGDIPSTVEELVQLPGVGPKMAHLAMHIAWDSVAGIAVDTHVHRISNRL 202
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + ++ LV G+ C KP+C C+ ++C
Sbjct: 203 KWVKKETKSPEETRVALEEWLPRELWKEINWLLVGFGQQTCLPVKPRCSQCLNQDICPAA 262
Query: 226 KQ 227
K+
Sbjct: 263 KR 264
>gi|152989955|ref|YP_001355677.1| A/G-specific adenine glycosylase [Nitratiruptor sp. SB155-2]
gi|151421816|dbj|BAF69320.1| A/G-specific adenine glycosylase [Nitratiruptor sp. SB155-2]
Length = 310
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 76/200 (38%), Gaps = 12/200 (6%)
Query: 28 IFYLFSLKW-PSPKGELYYV---NHFTLIVAVLLSAQSTDVNVN-KATKHLFEIADTPQK 82
+ + + + EL + + + + ++ ++ Q+ V + + T +
Sbjct: 1 MHKVLLEWFEKHGRHELPWRQTQDVYKIYLSEIMLQQTQVSRVEGEYYPKFLKRFPTLKA 60
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ +G Y + + + +P+ + L +LPGIG AN
Sbjct: 61 LAQASENEVLALWSGLGYYSRARNLL-----QCAKICKDTLPKEPKELMKLPGIGTYTAN 115
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
I + A+ P VDT+I R+ R + +V+Q I+ + L+ G
Sbjct: 116 AICAFAYNQPVAVVDTNIKRVIMRFFALQDE--KEVQQKAQMILNTNEPKKHNLALMDLG 173
Query: 203 RYVCKARKPQCQSCIISNLC 222
+C + P C C I C
Sbjct: 174 SLLCTPKNPLCDQCPIQQWC 193
>gi|315503433|ref|YP_004082320.1| hhh-gpd family protein [Micromonospora sp. L5]
gi|315410052|gb|ADU08169.1| HhH-GPD family protein [Micromonospora sp. L5]
Length = 304
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + ++V+ ++ Q+ V V A + P+ +
Sbjct: 16 SRWYERNARDLPWRKPGIGAWAILVSEVMLQQTPVVRVVPAWEAWLARWPEPRALAEDTP 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ +P L+ L LPG+G A + + A
Sbjct: 76 AEAIRMWGRLGYPRRAVR-LRECAAAIVERHGGVVPDRLDQLLALPGVGTYTARAVAAFA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIP--PKHQYNAHYWLVLHG 202
+G VDT++ R+ R + ++P P A + G
Sbjct: 135 YGQRHPVVDTNVRRVVCRAIAGEPDAGPTTRPADLVATEELLPIEPADAALASAAFMELG 194
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C C + + C
Sbjct: 195 AVVCTARAPRCAICPVESSC 214
>gi|257068484|ref|YP_003154739.1| A/G-specific DNA glycosylase [Brachybacterium faecium DSM 4810]
gi|256559302|gb|ACU85149.1| A/G-specific DNA glycosylase [Brachybacterium faecium DSM 4810]
Length = 285
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + + ++V+ ++ Q+ V V + E +P +
Sbjct: 7 DWFAVEGRDLPWRHEGVSAWAILVSEVMLQQTPVVRVLPRWQEWMERWPSPAALADAPTA 66
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ + + ++ E ++P+ E L LPGIG A + + A
Sbjct: 67 EVLRCWDRLGYPRRALR-LQECARAIVREHGGEVPRGEEALRALPGIGEYTAAAVTAFAH 125
Query: 150 GIPTIGVDTHIFRISNRI---GLAPGKTPNKVEQSLL-RIIP--PKHQYNAHYWLVLHGR 203
+ VDT+I R+ R P ++ + E+ L R +P + + ++ G
Sbjct: 126 RGRAVVVDTNIRRVLARSVRGRALPDRSYSAAERGLATRSLPGQRERSVAWNAAVMELGA 185
Query: 204 YVCKARKPQCQSCIISNL-CKRI 225
VC AR P+C C +++ C
Sbjct: 186 LVCTARSPRCAHCPLADNGCAWF 208
>gi|170700382|ref|ZP_02891392.1| A/G-specific adenine glycosylase [Burkholderia ambifaria IOP40-10]
gi|170134726|gb|EDT03044.1| A/G-specific adenine glycosylase [Burkholderia ambifaria IOP40-10]
Length = 381
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQ 60
K P+ L+ + +L + + + + ++ ++ Q
Sbjct: 15 KPPRIAPAPFPVTPLH-----RTFATRLIAWQRMHGRHDLPWQNTRDPYRIWLSEIMLQQ 69
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 70 TQVSTVIPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYS-RARNLHRCAQVVVAEHG 128
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VE 179
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K VE
Sbjct: 129 GVFPSTPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRVE 188
Query: 180 QSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + +P L+ G +C KP C C + C
Sbjct: 189 NDMWALAESLLPDAANEADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 239
>gi|194697286|gb|ACF82727.1| unknown [Zea mays]
Length = 352
Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++++ ++S+Q+ D + A + L E P ++ E L N I+ +G Y++K++
Sbjct: 150 FAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQF 209
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNR 166
I S I + F IP +L L L G+G K A++++S+A+ I VDTH+ RISNR
Sbjct: 210 IKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSIAWKNTQGICVDTHVHRISNR 269
Query: 167 IGLAP-------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G TP + SL + +P + LV G+ +C +P+C C I+
Sbjct: 270 LGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCDKCGIN 329
Query: 220 NLCKR-IKQ 227
N+C K+
Sbjct: 330 NICPSAFKE 338
>gi|33603427|ref|NP_890987.1| putative A/G-specific adenine glycosylase [Bordetella
bronchiseptica RB50]
gi|33577551|emb|CAE34816.1| putative A/G-specific adenine glycosylase [Bordetella
bronchiseptica RB50]
Length = 358
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A ++ + Y
Sbjct: 19 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYQRFLERFPDVAALAAARQEDVMPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ + P E + LPGIGR A I + A+G + +
Sbjct: 79 GLGYYA-RARNLHRCAQEIMQRCGGRFPPRAEEIATLPGIGRSTAAAIAAFAYGERSPIM 137
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRII-------PPKHQYNAHYWLVLHGRYVCKA 208
D ++ R+ R G VEQ L + P L+ G +C
Sbjct: 138 DGNVKRVFTRHFGIEGDPARRAVEQQLWALAAAQVQAAPDLDMPGYTQGLMDLGATLCTR 197
Query: 209 RKPQCQSCIISNLCKRIK 226
KP C+ C ++ C +
Sbjct: 198 GKPACERCPVAQSCIARR 215
>gi|300692624|ref|YP_003753619.1| adenine DNA glycosylase [Ralstonia solanacearum PSI07]
gi|299079684|emb|CBJ52361.1| adenine DNA glycosylase [Ralstonia solanacearum PSI07]
Length = 382
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 38 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTLQALAAAPADDVMAAWA 97
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ E L LPGIGR A I + ++G+ +
Sbjct: 98 GLGYYT-RARNLHRCAQIVVAEHGGVFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 156
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKH-QYNAHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K +E+++ RI +PP L+ G VC K
Sbjct: 157 DGNVKRVFARVFGIDGFPGDKRIEETMWRIAETVLPPSDGIQPYTQGLMDLGATVCTRGK 216
Query: 211 PQCQ----SCIISNLCKRIK 226
P C +C + +LC+ +
Sbjct: 217 PACLTGERACPLESLCEAHR 236
>gi|15668794|ref|NP_247597.1| endonuclease III [Methanocaldococcus jannaschii DSM 2661]
gi|3915935|sp|Q58030|Y613_METJA RecName: Full=Putative endonuclease MJ0613
gi|2826298|gb|AAB98606.1| endonuclease III (nth1) [Methanocaldococcus jannaschii DSM 2661]
Length = 344
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F ++++ ++SA++ D + +K LF+ +L I E+KL + I G Y+ K+
Sbjct: 24 KDPFKVLISTIISARTKDEVTEEVSKKLFKEIKDVDDLLNIDEEKLADLIYPAGFYKNKA 83
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+N+ L+ IL ++ K+P +LE L +LPG+GRK AN+++++AF I VDTH+ RI N
Sbjct: 84 KNLKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLAFNKDGICVDTHVHRICN 143
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--ISNLCK 223
R + +TP + E L + +P K+ + LV+ GR +C ++ +C C I C
Sbjct: 144 RWEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFGREICSSKS-KCDKCFKEIKEKCP 202
Query: 224 RIKQ 227
++
Sbjct: 203 YYEK 206
>gi|218672401|ref|ZP_03522070.1| A/G-specific adenine glycosylase protein [Rhizobium etli GR56]
Length = 206
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 16/194 (8%)
Query: 32 FSLKWPSPKGELYYV------------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +L + + + + ++ ++ Q+T V +
Sbjct: 14 LLDWYDRHHRDLPWRVSPGMAASGVKPDPYRVWLSEVMLQQTTVQAVKPYFERFLTRWPD 73
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + +G Y ++ N+ + + E P T GL LPGIG
Sbjct: 74 VTDLAAAESDAVMAAWAGLGYYA-RARNLKKCAEAVAKEHGGVFPDTEAGLKSLPGIGDY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK--VEQSLLRII-PPKHQYNAHY 196
A + ++AF +D ++ R+ +R+ P V + + ++ P +
Sbjct: 133 TAAAVAAIAFNRQAAVMDGNVERVISRLYAIEAPLPAAKPVMKDKVALMTPVSRPGDFAQ 192
Query: 197 WLVLHGRYVCKARK 210
++ G +C ++
Sbjct: 193 AMMDLGATICTPKR 206
>gi|94309240|ref|YP_582450.1| A/G-specific DNA-adenine glycosylase [Cupriavidus metallidurans
CH34]
gi|93353092|gb|ABF07181.1| A/G-specific adenine DNA glycosylase [Cupriavidus metallidurans
CH34]
Length = 405
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 19/205 (9%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + + T + A ++
Sbjct: 56 RHDLPWQNTRDPYRIWLSEIMLQQTQVAAVIEYFQRFVTALPTVAALAAASADEVMALWA 115
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++E P E L LPGIGR A I + + G+ + +
Sbjct: 116 GLGYYS-RARNLHRCAKTVVDEHAGVFPTDPEVLVTLPGIGRSTAAAIAAFSAGVRSPIL 174
Query: 157 DTHIFRISNRIGLAPGKTPN-KVEQSLLRI----IPP------KHQYNAHYWLVLHGRYV 205
D ++ R+ R+ G +E + + +PP H L+ G +
Sbjct: 175 DGNVKRVFARVFGIHGYPGERAIENRMWALAEQALPPAGRHQADHMVAYTQGLMDLGATI 234
Query: 206 CKARKPQC----QSCIISNLCKRIK 226
C KP C ++C + C K
Sbjct: 235 CSRGKPACLADAEACPLVADCLARK 259
>gi|33594689|ref|NP_882333.1| putative A/G-specific adenine glycosylase [Bordetella pertussis
Tohama I]
gi|33564765|emb|CAE44091.1| putative A/G-specific adenine glycosylase [Bordetella pertussis
Tohama I]
gi|332384100|gb|AEE68947.1| putative A/G-specific adenine glycosylase [Bordetella pertussis CS]
Length = 358
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 12/198 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A ++ + Y
Sbjct: 19 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYQRFLERFPDVAALAAARQEDVMPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ + P E + LPGIGR A I + A+G + +
Sbjct: 79 GLGYYA-RARNLHRCAQEIMQRCVGRFPPRAEEIATLPGIGRSTAAAIAAFAYGERSPIM 137
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRII-------PPKHQYNAHYWLVLHGRYVCKA 208
D ++ R+ R G VEQ L + P L+ G +C
Sbjct: 138 DGNVKRVFTRHFGIEGDPARRAVEQQLWALAAAQVQAAPDLDMPGYTQGLMDLGATLCTR 197
Query: 209 RKPQCQSCIISNLCKRIK 226
KP C+ C ++ C +
Sbjct: 198 GKPACERCPVAQSCIARR 215
>gi|29831250|ref|NP_825884.1| adenine glycosylase [Streptomyces avermitilis MA-4680]
gi|29608365|dbj|BAC72419.1| putative A/G-specific adenine glycosylase [Streptomyces avermitilis
MA-4680]
Length = 313
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 11/207 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
E + + +L + + ++V+ + Q+ V + P
Sbjct: 25 EALHAQVIAWFDEHARDLPWRRPDAGPWGVMVSEFMLQQTPVNRVLPVYEQWLARWPRPA 84
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +G R+ + + + + +P L LPGIG A
Sbjct: 85 DLAKEAPGEAVRAWGRLGYPRRALR-LHGAAVAITERHNGDVPTEHAQLLALPGIGEYTA 143
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQ--YNAH 195
+ S A+G +DT++ R+ R PN + ++P
Sbjct: 144 AAVASFAYGQRHAVLDTNVRRVFARAVTGVQYPPNATTAAERKLARALLPEDESTASRWA 203
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+ G VC A+ C C I+ C
Sbjct: 204 AASMELGALVCTAKNETCHRCPIAGQC 230
>gi|329939490|ref|ZP_08288826.1| adenine glycosylase [Streptomyces griseoaurantiacus M045]
gi|329301719|gb|EGG45613.1| adenine glycosylase [Streptomyces griseoaurantiacus M045]
Length = 328
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P +
Sbjct: 48 AWFEAHARDLPWRRPDAGPWGVMVSEFMLQQTPVSRVLPVYEQWLARWPRPADLAKEAPG 107
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 108 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPTDHAQLLALPGIGEYTAAAVASFAY 166
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + G
Sbjct: 167 GQRHAVLDTNVRRVLARAVTGVQYPPNATTAAERKLARALLPEDEHTASRWAAASMELGA 226
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ C C I++ C
Sbjct: 227 LVCTAKNESCHRCPIADRC 245
>gi|18075674|emb|CAD11244.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E +++P + L +LPGI
Sbjct: 61 FPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F VD +I R+ GL P ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLNSNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 180 QALIDLGALICSP-KPKCAICPFNPYC 205
>gi|241661902|ref|YP_002980262.1| A/G-specific adenine glycosylase [Ralstonia pickettii 12D]
gi|240863929|gb|ACS61590.1| A/G-specific adenine glycosylase [Ralstonia pickettii 12D]
Length = 382
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 91/237 (38%), Gaps = 13/237 (5%)
Query: 2 VSSKKSDSYQGNSPLGCLYT-PKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSA 59
+++ + + P L + P + + + + + ++ ++
Sbjct: 1 MTATPRRTRRAAQPAAALPSLPDDFAVRVVAWQQRHGRHHLPWQNTGDAYRTWLSEIMLQ 60
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E T Q + A + +G Y ++ N+ + I++ E
Sbjct: 61 QTQVSAVLGYYARFIERFPTVQALAAAPADDVMATWAGLGYYT-RARNLHRCAQIVVAEH 119
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P+ + L LPGIGR A I + ++G+ +D ++ R+ R+ G +K V
Sbjct: 120 GGIFPRDPDVLATLPGIGRSTAAAIAAFSYGVRAAILDGNVKRVFARVFGIDGFPGDKRV 179
Query: 179 EQSLLR-----IIPPKHQYNAHYWLVLHGRYVCKARKPQCQS----CIISNLCKRIK 226
E ++ R + P + L+ G VC KP C S C + +LC+ +
Sbjct: 180 EDTMWRIAEAVLPPAEGIQPYTQGLMDLGATVCTRGKPACLSGERPCPLESLCEARR 236
>gi|268678652|ref|YP_003303083.1| A/G-specific adenine glycosylase [Sulfurospirillum deleyianum DSM
6946]
gi|268616683|gb|ACZ11048.1| A/G-specific adenine glycosylase [Sulfurospirillum deleyianum DSM
6946]
Length = 317
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 9/190 (4%)
Query: 38 SPKGELYYV---NHFTLIVAVLLSAQSTDVNV-NKATKHLFEIADTPQKMLAIGEKKLQN 93
+ + +L + + + + ++ ++ Q+ V + E T + + +
Sbjct: 18 NGRHDLPWRQTSDAYKIYLSEIMLQQTQVKTVLERFYFPFLERFPTLKSVAEAPLDDVLK 77
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+G Y + H +P++ E L L GIG+ A+ I + A+ P
Sbjct: 78 MWEGLGYYTRA-----KNLHHTAFTCKGILPRSPEELGGLKGIGKSTAHAICAFAYHEPL 132
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
+D ++ R+ R K + + ++ K+ Y + ++ G VC + PQC
Sbjct: 133 PILDANVKRVLCRYFAISVKDEKVLWERAWELLHVKYPYEHNQAMMDIGALVCTPKNPQC 192
Query: 214 QSCIISNLCK 223
+C ++ CK
Sbjct: 193 DACPLAFTCK 202
>gi|332287845|ref|YP_004422746.1| putative DNA repair protein [Chlamydophila psittaci 6BC]
gi|325507289|gb|ADZ18927.1| putative DNA repair protein [Chlamydophila psittaci 6BC]
gi|328915106|gb|AEB55939.1| endonuclease III [Chlamydophila psittaci 6BC]
Length = 227
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I +P P+ L + F L+VA+LLS STD VN T LF +A Q ++
Sbjct: 9 NFILSTLDELFPDPQPSLTGWRTPFQLLVAILLSGNSTDKAVNAVTPRLFSLAPDAQTLV 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ + L + I G+ R+K+ + +L+ IL+ ++ + P +LE LT+LPG+GRK A+V
Sbjct: 69 QLPLENLYSLISPCGLGRRKAAYLHNLAKILLEKYTGEPPASLELLTQLPGVGRKTASVF 128
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + + IPT VDTHI R+S R G++ ++P+ E+ L+ + H L+ + R
Sbjct: 129 LGIIYKIPTFPVDTHILRLSQRWGISNKRSPSAAEKDLVLFFGESNSPKLHLQLIYYARE 188
Query: 205 VCKARKPQCQSCIISNL 221
C A C I
Sbjct: 189 YCPALYHDTNKCKICAY 205
>gi|119872647|ref|YP_930654.1| HhH-GPD family protein [Pyrobaculum islandicum DSM 4184]
gi|119674055|gb|ABL88311.1| HhH-GPD family protein [Pyrobaculum islandicum DSM 4184]
Length = 222
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQ 81
++E P N F L VAV+LS ++D N +A ++L TP+
Sbjct: 14 RIDEFIA--------PVVWQREKNLFELFVAVILSQNTSDKNAFRAFENLKMRLGTITPE 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE-------GLTRLP 134
+ + E +L I+ G+YR+++ + +L+ + L LP
Sbjct: 66 SLNKMSEGELAELIKPAGMYRQRARVLKNLAETFLKYDITPQRLLEMGAERARAFLLTLP 125
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+G+K A+VIL + G+P VDTHI RI+ R G+ GK+ +++ + + +P
Sbjct: 126 GVGKKTADVIL-VNLGLPAFPVDTHITRIARRWGI--GKSYDEISRWFIERLPQHKYLEL 182
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
H L+ GR +CKAR P+C C I C K
Sbjct: 183 HLKLIQFGREICKARNPKCDVCPIGQRCPSYK 214
>gi|18075678|emb|CAD11247.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E +++P + L +LPGI
Sbjct: 61 FPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F VD +I R+ GL P ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLNSNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 180 QALIDLGALICSP-KPKCAICPFNPYC 205
>gi|221131371|ref|XP_002164144.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 319
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLF 74
L KE+ + + + + + +++++LS+Q+ D A L
Sbjct: 103 LNNIKEMRKSRNAIVDSYGCERTADERESPEVKRYQTLISLMLSSQTKDGVTFAAMDRLK 162
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T + E ++ I +G ++KK+ I + + I ++F+N IP +L+GL LP
Sbjct: 163 KHGLTIPSIFETSESVIEELIYPVGFWKKKAAFIKNATAICHDKFNNDIPNSLQGLLSLP 222
Query: 135 GIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G K A++ ++ A+G+ T VDTH+ RI+NR+ K P + L ++P +
Sbjct: 223 GVGPKMAHICMNAAWGVVTGIGVDTHVHRIANRLKWVNTKKPEETRNCLEALLPRCEWDD 282
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ LV G+ C P+C SC+ ++C
Sbjct: 283 INILLVGFGQQTCLPVNPKCISCLNYDICPS 313
>gi|116333465|ref|YP_794992.1| EndoIII-related endonuclease [Lactobacillus brevis ATCC 367]
gi|116098812|gb|ABJ63961.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Lactobacillus brevis ATCC 367]
Length = 216
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + + L F +++V+LSAQ+TDV+VNK T LFE
Sbjct: 1 MLKDDQIVWAIHQMEDEIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPILFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
PQ ++ ++ I+++G++ K+ NII + I+ E + +P +G+ LPG GR
Sbjct: 61 DPQDLMVANVTDVEAIIKSVGLFHNKARNIIKTARIVHEELADVVPTDRKGIMALPGAGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS F PT VDTH+ IS R+ A +P +VEQ ++ ++PP+ + AH+
Sbjct: 121 KTANVVLSDVFDRPTFAVDTHVSAISKRLHFVAQNASPLQVEQKIVGVLPPEELHQAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +GR P + C + C ++ +
Sbjct: 181 MIEYGRKYSMKLTPDKEVCQLIIDCDQLNE 210
>gi|326318313|ref|YP_004235985.1| A/G-specific adenine glycosylase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375149|gb|ADX47418.1| A/G-specific adenine glycosylase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 358
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 10/190 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V E + + A E + +G Y ++
Sbjct: 30 RDPYRVWLSEIMLQQTQVSTVLDYYVRFLERFPDVRALAAAPEDDVMALWSGLGYYS-RA 88
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ + P++ E L LPGIGR A I S F +D ++ R+
Sbjct: 89 RNLHRCAKEVVERCGGEFPRSAEALAGLPGIGRSTAGAIASFCFAERVPILDANVRRVLT 148
Query: 166 RI-----GLAPGKTPNKVEQSLLRIIPPKHQYN----AHYWLVLHGRYVCKARKPQCQSC 216
R+ LA + + ++P L+ G +C RKP C C
Sbjct: 149 RVLGFDADLAVARNERDLWDRASELLPLDDLQESMPRYTQGLMDLGASLCTPRKPACILC 208
Query: 217 IISNLCKRIK 226
+ C +
Sbjct: 209 PLQPQCAAAR 218
>gi|33598484|ref|NP_886127.1| putative A/G-specific adenine glycosylase [Bordetella parapertussis
12822]
gi|33574613|emb|CAE39263.1| putative A/G-specific adenine glycosylase [Bordetella
parapertussis]
Length = 358
Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 12/198 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + E + A ++ + Y
Sbjct: 19 RHDLPWQNTRDPYRIWLSEIMLQQTQVATVIPYYQRFLERFPDVAALAAARQEDVMPYWA 78
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ ++P E + LPGIGR A I + A+G + +
Sbjct: 79 GLGYYA-RARNLHRCAQEIMQRCGGRLPPRAEEIATLPGIGRSTAAAIAAFAYGERSPIM 137
Query: 157 DTHIFRISNRIGLAPGKT-PNKVEQSLLRII-------PPKHQYNAHYWLVLHGRYVCKA 208
D ++ R+ R G VEQ L + P L+ G +C
Sbjct: 138 DGNVKRVFTRHFGIEGDPARRAVEQQLWALAAAQVQAAPDLDMPGYTQGLMDLGATLCTR 197
Query: 209 RKPQCQSCIISNLCKRIK 226
KP C+ C ++ C +
Sbjct: 198 GKPACERCPVAQSCIARR 215
>gi|320526998|ref|ZP_08028187.1| putative A/G-specific adenine glycosylase [Solobacterium moorei
F0204]
gi|320132583|gb|EFW25124.1| putative A/G-specific adenine glycosylase [Solobacterium moorei
F0204]
Length = 353
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 14/211 (6%)
Query: 29 FYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+ + K + + N + + ++ ++ Q+ V +
Sbjct: 6 IKKLTQWYDQNKRSMPWRDTGNPYDVWLSEIMLQQTRIEAVKPKYIAFKNELPDIASLAN 65
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +L +G Y ++ N+ + L+ +D K+P+ E L LPGIG A I
Sbjct: 66 CDDDRLMRLWEGLGYYS-RARNLKKCAIFLMEYYDGKLPKDFELLKILPGIGPYTAGAIA 124
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPK----HQYNAHY 196
S+A+ +P +D ++ R+ R +E+ L PK + + +
Sbjct: 125 SIAYNLPAPAIDGNVLRVLTRYYGITEDIRLPKVKEMIEEKLNDFYSPKQLNPNYASFNQ 184
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
++ G +C PQC+ C ++ C +
Sbjct: 185 GIMELGETICVPNGAPQCKKCPLNKNCYAYQ 215
>gi|318061540|ref|ZP_07980261.1| A/G-specific adenine glycosylase [Streptomyces sp. SA3_actG]
Length = 322
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P +
Sbjct: 33 AWYEANARDLPWRRPEAGAWGVMVSEFMLQQTPVARVLPVYEEWMRRWPRPADLAKEPSG 92
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P+ L LPGIG A + S A+
Sbjct: 93 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPEHHAQLLALPGIGEYTAAAVASFAY 151
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + R+ +P + G
Sbjct: 152 GQRHAVLDTNVRRVLARAVSGEQFPPNATTAAERRLARSVLPEDEDTAARWAAASMELGA 211
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ +C+SC +S+ C
Sbjct: 212 LVCTAKGERCESCPLSDRC 230
>gi|171318637|ref|ZP_02907783.1| A/G-specific adenine glycosylase [Burkholderia ambifaria MEX-5]
gi|171096145|gb|EDT41068.1| A/G-specific adenine glycosylase [Burkholderia ambifaria MEX-5]
Length = 381
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWP-SPKGELYY---VNHFTLIVAVLLSAQ 60
K P+ L+ + +L + + + + ++ ++ Q
Sbjct: 15 KPPRIAPAPFPVTPLH-----RTFATRLIAWQRMHGRHDLPWQNTRDPYRIWLSEIMLQQ 69
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 70 TQVSTVIPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYS-RARNLHRCAQVVVAEHG 128
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VE 179
P T E L LPGIGR A I S A+G +D ++ R+ R+ G K VE
Sbjct: 129 GVFPSTPEALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRVE 188
Query: 180 QSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + +P L+ G +C KP C C + C
Sbjct: 189 NDMWALAESLLPDAANEADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 239
>gi|298736914|ref|YP_003729444.1| A/G-specific adenine glycosylase [Helicobacter pylori B8]
gi|298356108|emb|CBI66980.1| A/G-specific adenine glycosylase [Helicobacter pylori B8]
Length = 328
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + L + N + + ++ ++S Q+ V + +
Sbjct: 1 METLHNALLKWYEEFGRKGLPFRNLKGVNAPYEVYISEVMSQQTQISTVIERFYSPFLKA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E ++++P + L +LPGI
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYY-LRAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD +I R + GL P T ++ + +N +
Sbjct: 120 GTYTANAILCFGFREKSACVDANIKRALLRLFGLDPNTTAKDLQIKANDFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 180 QALIDLGALICSP-KPKCAICPLNPYC 205
>gi|167585428|ref|ZP_02377816.1| A/G-specific adenine glycosylase MutY [Burkholderia ubonensis Bu]
Length = 292
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 19/232 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSA 59
K P+ L+ + + +L + + + + ++ ++
Sbjct: 1 MKPPRIAPAPFPVTPLH-----RTFATRLIAWQRAHGRHDLPWQNTRDPYRIWLSEIMLQ 55
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E + A + +G Y ++ N+ + ++ E
Sbjct: 56 QTQVSTVVPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYS-RARNLHRCAQVVAAEH 114
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-V 178
P T + L LPGIGR A I S AFG +D ++ R+ R+ G K V
Sbjct: 115 GGAFPATPDALADLPGIGRSTAAAIASFAFGAHATILDGNVKRVLARVFGVEGFPGEKRV 174
Query: 179 EQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
E + + +P L+ G +C KP C C + C
Sbjct: 175 ENDMWALAESLLPDAANAADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 226
>gi|18075698|emb|CAD11262.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ + V + F A
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQIITVVERFYSPFLEA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E +++P + L +LPGIG
Sbjct: 61 FPTLKDLANAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F T VD ++ R+ GL P ++ + +N +
Sbjct: 121 AYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLNLNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 181 ALIDLGALICSP-KPKCAICPLNLYC 205
>gi|118601744|ref|NP_001073043.1| endonuclease III-like protein 1 [Gallus gallus]
gi|118341820|dbj|BAF37123.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D + A L + T +L + + L I +G +R K + I
Sbjct: 99 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 158
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ IL ++ IP T+E L +LPG+G K A++ +++ + I VDTH+ RI+NR+
Sbjct: 159 KQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNRL 218
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P + +L +P ++ LV G+ C P+C+ C+ ++C
Sbjct: 219 KWVKKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQDICPAA 278
Query: 226 KQ 227
K+
Sbjct: 279 KR 280
>gi|326929092|ref|XP_003210705.1| PREDICTED: endonuclease III-like protein 1-like [Meleagris
gallopavo]
Length = 272
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D + A L + T +L + + L I +G +R K + I
Sbjct: 90 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 149
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ IL + IP T+E L +LPG+G K A++ +++ + I VDTH+ RI+NR+
Sbjct: 150 KQTTAILKQNYGGDIPSTVEDLVKLPGVGPKMAHLAMNIAWNSVTGIAVDTHVHRITNRL 209
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P + +L +P ++ LV G+ C P+C+ C+ ++C
Sbjct: 210 KWVKKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQDICPAA 269
Query: 226 KQ 227
K+
Sbjct: 270 KR 271
>gi|302349120|ref|YP_003816758.1| predicted EndoIII-related endonuclease [Acidilobus saccharovorans
345-15]
gi|302329532|gb|ADL19727.1| predicted EndoIII-related endonuclease [Acidilobus saccharovorans
345-15]
Length = 230
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L+VA++LS S D N A L + L+ IR G+ R+K+
Sbjct: 40 PFALLVAIILSQNSNDRNSIAAYDDLKRATGLDPARILALGDGLEQVIRRAGMVRQKARA 99
Query: 108 IISLSH-----ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
I L+ + I + L + GIG K +V LS+ +P VDTH R
Sbjct: 100 IRELARLALERGVDFLEHGDINEVERALLSIRGIGSKTVDVFLSLYRKVPRFAVDTHAKR 159
Query: 163 ISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
I+ R GL G + +V +LL P+ AH L+ GR C AR P+C C +
Sbjct: 160 IAARWGLTRKGASYEEVSGALLNFFGPERSDEAHRLLIAFGRAYCTARNPRCSECPLRQY 219
Query: 222 CKR 224
C
Sbjct: 220 CPS 222
>gi|281211004|gb|EFA85170.1| A/G-specific adenine DNA glycosylase [Polysphondylium pallidum
PN500]
Length = 868
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVN---------HFTLIVAVLLSAQSTDVNVNKATK 71
+E+E I + K +L + + + + V
Sbjct: 106 KDEEIESIRESMLKWYSGCKRDLPWRQRDGFDRQTIAYRVW--------TRVSVVIDYFN 157
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T +K+ ++ +G YR+ ++ + ++ + L
Sbjct: 158 RWIDNWPTIEKLAGASLDQVNQVWAGLGYYRRAKNLHLAATRLVKEN----NSLIPDKLQ 213
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-----EQSLLRII 186
+L + A ILS+AF VD ++ R+ +R+ + + ++
Sbjct: 214 QLKDVEGYTAGAILSIAFEKQEPLVDGNVIRVLSRLRMIGANPKKAATIKLHWKLAGELV 273
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + + L+ G C P C C +S+ C +Q
Sbjct: 274 DAEQPGDFNQALMELGATTCLVTSPLCNKCPVSSQCLAYQQ 314
>gi|18312246|ref|NP_558913.1| DNA-(apurinic or apyrimidinic site) lyase (endonuclease III, PaNth)
[Pyrobaculum aerophilum str. IM2]
gi|7141250|gb|AAF37269.1|AF222334_1 putative DNA glycosylase [Pyrobaculum aerophilum]
gi|18159688|gb|AAL63095.1| DNA-(apurinic or apyrimidinic site) lyase (endonuclease III, PaNth)
[Pyrobaculum aerophilum str. IM2]
Length = 223
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 24 ELEEIFYLFSLK----WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--A 77
EL EI + + +P N F ++VAV+LS ++D N KA ++L +
Sbjct: 3 ELIEIVDRYVELRLNEFIAPVVWRREKNLFKMLVAVVLSQNTSDKNAFKALENLEKQVGT 62
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGL 130
TPQ +L + + L+ I+ G+YR+++ N+ +L+ I + + E L
Sbjct: 63 ITPQALLELPIEALEELIKPAGMYRQRARNLKALAEAFIQLGLTPERLVEMGPERARELL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG+G+K A+V+L + G+P VDTHI RI+ R G+ G+ +++ + + +P
Sbjct: 123 LSLPGVGKKTADVVL-VNLGLPAFPVDTHITRIAKRWGI--GEKYDEISRWFMERLPRDK 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ H L+ GR VC+AR P+C C I C K
Sbjct: 180 YLDFHLKLIQFGRDVCRARNPKCGQCPIGAKCPSFK 215
>gi|91088451|ref|XP_968911.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 283
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A++LS+Q+ D V A + L + +LA ++KL I +G ++ K ++I
Sbjct: 97 YQALLALMLSSQTKDQVVFSAMQKLHKYGCNVDNILATSDEKLGELIYPVGFWKTKVKHI 156
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL NE++ IP+T+E L +LPG+G K AN+ + A+ T VDTH+ RISNRI
Sbjct: 157 KKASEILKNEYNGDIPRTVEDLCKLPGVGPKMANLCMKTAWNEVTGIGVDTHVHRISNRI 216
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G KTP + ++SL R +P LV G+ CK KPQC +C+ +++C +
Sbjct: 217 GWVKTKTPEETKKSLERWLPRDLWDEIGALLVGFGQQTCKPVKPQCGTCLNNSVCPFGTK 276
>gi|15611200|ref|NP_222851.1| DNA glycosylase MutY [Helicobacter pylori J99]
gi|4154640|gb|AAD05709.1| A/G-SPECIFIC ADENINE GLYCOSYLASE [Helicobacter pylori J99]
Length = 328
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + +
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVIERFYPPFLKA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E +++P + L +LPGI
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD ++ R+ GL P ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 180 QALIDLGALICSP-KPKCAICPFNPYC 205
>gi|217034190|ref|ZP_03439609.1| hypothetical protein HP9810_886g27 [Helicobacter pylori 98-10]
gi|216943358|gb|EEC22817.1| hypothetical protein HP9810_886g27 [Helicobacter pylori 98-10]
Length = 328
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + +
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLKA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E ++++P + L +LPGI
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD +I R+ GL P T ++ + +N +
Sbjct: 120 GTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 180 QALIDLGALICSP-KPKCALCPLNPYC 205
>gi|167737038|ref|ZP_02409812.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 14]
Length = 252
Score = 89.6 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPK-HQYN---AHYWLVLHGRYVCK 207
D ++ R+ R+ G +K +E + + +P + L+ G +C
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWALAEALLPDAAEPTDVTAYTQGLMDLGATLCV 211
Query: 208 ARKPQCQSCIISNLC 222
KP+C C + C
Sbjct: 212 RGKPECGRCPFAGEC 226
>gi|297517862|ref|ZP_06936248.1| endonuclease III [Escherichia coli OP50]
Length = 121
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/118 (49%), Positives = 83/118 (70%)
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL 169
IL+ + + ++P+ L LPG+GRK ANV+L+ AFG PTI VDTHIFR+ NR
Sbjct: 1 KTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQF 60
Query: 170 APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
APGK +VE+ LL+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 61 APGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEK 118
>gi|313648019|gb|EFS12465.1| A/G-specific adenine glycosylase [Shigella flexneri 2a str. 2457T]
Length = 312
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + T + ++ + +G Y ++ N+ + +
Sbjct: 1 MLQQTQVATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYA-RARNLHKAAQQVA 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-P 175
K P+T E + LPG+GR A ILS++ G +D ++ R+ R G
Sbjct: 60 TLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGK 119
Query: 176 NKVEQSLLRI----IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+VE L + P + ++ G +C KP+C C + N C
Sbjct: 120 KEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGC 170
>gi|300711172|ref|YP_003736986.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
gi|299124855|gb|ADJ15194.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
Length = 298
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 84/210 (40%), Gaps = 8/210 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P E++ + + + + + + ++V+ ++S Q+ V +A E
Sbjct: 8 PGEIDRVRASLIEWYERDHRDFPWRRTEDPYAILVSEVMSQQTQLERVEEAWATFLERWP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
P+ + A + + + Y +++ + + +I EFD + P+ EGL L G+G
Sbjct: 68 DPETLAAADRSAVVGFWTDHRLGYNNRAKYLHEAAGQVIKEFDGEFPEEPEGLQELQGVG 127
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
AN + S AF VDT++ R+ R P + E ++P +
Sbjct: 128 PYTANAVASFAFDNGDAVVDTNVKRVLYRAFDVPDDD-SAFEDVARALMPAGESRVWNNA 186
Query: 198 LVLHGRYVCKARKPQCQS--CIISNLCKRI 225
++ G C+ + P+C+ C C
Sbjct: 187 IMELGGVACQ-KTPRCEEAGCPFREWCSAY 215
>gi|18075682|emb|CAD11250.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ V + F A
Sbjct: 1 METLHNALLEWYEECGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVVERFYSPFLKA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I E ++++P + L +LPGIG
Sbjct: 61 FPTLKDLASAQLEKVLLLWRGLGYYSRAKNLKKSAEICAKEHNSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F + VD ++ R+ GL P ++ + +N +
Sbjct: 121 AYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 181 ALIDLGALICSP-KPKCAICPLNPYC 205
>gi|297201442|ref|ZP_06918839.1| A/G-specific adenine glycosylase [Streptomyces sviceus ATCC 29083]
gi|297147887|gb|EFH28777.1| A/G-specific adenine glycosylase [Streptomyces sviceus ATCC 29083]
Length = 320
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ + Q+ V + P + A
Sbjct: 40 DWFDEHARDLPWRRPDAGPWGVMVSEFMLQQTPVSRVLPVYEQWLARWPRPADLAAEAPG 99
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 100 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPTDHAQLLALPGIGEYTAAAVASFAY 158
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQY--NAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + G
Sbjct: 159 GQRHAVLDTNVRRVFARAVTGVRYPPNATTAAERKLARALLPQDESTAARWAAASMELGA 218
Query: 204 YVCKARKPQCQSCIISNLC 222
+C A+ CQ C I+ C
Sbjct: 219 LICTAKNESCQRCPIAAQC 237
>gi|313835653|gb|EFS73367.1| base excision DNA repair protein, HhH-GPD family [Propionibacterium
acnes HL037PA2]
gi|314928325|gb|EFS92156.1| base excision DNA repair protein, HhH-GPD family [Propionibacterium
acnes HL044PA1]
gi|314970254|gb|EFT14352.1| base excision DNA repair protein, HhH-GPD family [Propionibacterium
acnes HL037PA3]
Length = 255
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
++V+ ++S Q+ V TP + + +G R+ + +
Sbjct: 1 MLVSEVMSQQTPMSRVIDPWHEWMNRWPTPDDLAEEDSGEAVAAWGRLGYPRRALR-LHA 59
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ + E+D +P + + L LPGIG A ++S AFG +DT++ R+ R
Sbjct: 60 CAVAIATEYDGVVPSSYDELVALPGIGDYTAAAVVSFAFGGRATVLDTNVRRLIARAESG 119
Query: 171 PGKTPNKVEQSL----LRIIPPKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P V ++ ++P + + G VC AR PQC C I C+
Sbjct: 120 IANCPTSVTKAERVVADALVPEEDARAALWAVASMELGALVCTARSPQCTVCPIRERCRW 179
Query: 225 I 225
+
Sbjct: 180 V 180
>gi|255024649|ref|ZP_05296635.1| endonuclease III [Listeria monocytogenes FSL J1-208]
Length = 180
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 65/159 (40%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+P+ LA+ ++L + IR+IG+YR K++NI LS ++ EF+ ++P+T
Sbjct: 7 CFFFLXKYHSPEDYLAVPLEELMDDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPRTHGE 66
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPP 188
L LPG+GRK ANV+LS+ FGIP I VDTH+ RIS R+G+ + +VE++L R +P
Sbjct: 67 LESLPGVGRKTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPK 126
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +AH++++ GRY CKAR P+C +C + LC+ K+
Sbjct: 127 ELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKK 165
>gi|114051958|ref|NP_001039862.1| endonuclease III-like protein 1 [Bos taurus]
gi|109892805|sp|Q2KID2|NTHL1_BOVIN RecName: Full=Endonuclease III-like protein 1
gi|86826431|gb|AAI12682.1| Nth endonuclease III-like 1 (E. coli) [Bos taurus]
gi|296473490|gb|DAA15605.1| nth endonuclease III-like 1 [Bos taurus]
Length = 305
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 123 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDSTLGALIYPVGFWRSKVKYI 182
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL +D IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 183 KQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 242
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + ++L +P + + LV G+ C +P+CQ+C+ LC
Sbjct: 243 RWTKKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNRALCPAA 302
Query: 226 K 226
+
Sbjct: 303 R 303
>gi|257054000|ref|YP_003131833.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
gi|256692763|gb|ACV13100.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
Length = 306
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 8/204 (3%)
Query: 28 IFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + E + + + ++V+ ++S Q+ V A + T +
Sbjct: 15 IQRALIEWYQDDHREYPWRETDDPYAILVSEVMSQQTQLDRVVDAWDDFLDRWPTVADLA 74
Query: 85 AIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + + Y +++ + + ++ E+D P++ + L+ L G+G AN
Sbjct: 75 DADRADVVGFWSDHSLGYNNRAKYLHEAATQIVEEYDGAFPESPDELSELMGVGPYTANA 134
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ S AF VDT++ R+ + E + ++ + ++ G
Sbjct: 135 VASFAFNNGDAVVDTNVKRVL-YRAFSIPDEDAAFEDAASTLMSEGESRVWNNAIMELGG 193
Query: 204 YVCKARKPQCQS--CIISNLCKRI 225
C + P+C + C C
Sbjct: 194 VAC-EKTPRCDAAGCPWREWCDAY 216
>gi|134078608|emb|CAK32626.1| unnamed protein product [Aspergillus niger]
Length = 390
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 19/242 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH----F 49
+ ++K G + + + ++ P+ ELY+ + F
Sbjct: 123 MPARKIKIENGGYSMEPPSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPRDRRF 182
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLF----EIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
++A++LS+Q+ D A + L + + +LA+ ++L I +G + K+
Sbjct: 183 QTLIALMLSSQTKDTVTAVAMQRLHTELGDHTLNLENILAVTPERLNELIAKVGFHNNKT 242
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRIS 164
+ I + + IL +++D+ IP T L +LPG+G K A + +S A+G VD H+ RI+
Sbjct: 243 KYIKAAAIILRDQYDSDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIGVDVHVHRIT 302
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLC 222
N G K P + +L +P + + LV G+ VC +C C ++ LC
Sbjct: 303 NLWGWHKTKNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECDLAGTKLC 362
Query: 223 KR 224
K
Sbjct: 363 KS 364
>gi|270011744|gb|EFA08192.1| hypothetical protein TcasGA2_TC005819 [Tribolium castaneum]
Length = 266
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++A++LS+Q+ D V A + L + +LA ++KL I +G ++ K ++I
Sbjct: 80 YQALLALMLSSQTKDQVVFSAMQKLHKYGCNVDNILATSDEKLGELIYPVGFWKTKVKHI 139
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL NE++ IP+T+E L +LPG+G K AN+ + A+ T VDTH+ RISNRI
Sbjct: 140 KKASEILKNEYNGDIPRTVEDLCKLPGVGPKMANLCMKTAWNEVTGIGVDTHVHRISNRI 199
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G KTP + ++SL R +P LV G+ CK KPQC +C+ +++C +
Sbjct: 200 GWVKTKTPEETKKSLERWLPRDLWDEIGALLVGFGQQTCKPVKPQCGTCLNNSVCPFGTK 259
>gi|297192900|ref|ZP_06910298.1| adenine glycosylase [Streptomyces pristinaespiralis ATCC 25486]
gi|197722617|gb|EDY66525.1| adenine glycosylase [Streptomyces pristinaespiralis ATCC 25486]
Length = 304
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ + Q+ V + P +
Sbjct: 24 AWFDQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLARWPRPADLAKEAPG 83
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + ++P L LPGIG A + S A+
Sbjct: 84 EAVRAWGRLGYPRRALR-LHGAAQAITERHGGEVPTDHAQLLALPGIGEYTAAAVASFAY 142
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++ +P + + G
Sbjct: 143 GQRHAVLDTNVRRVFARAATGIQYPPNATTAAERKLARMLLPEEERTAARWAAASMELGA 202
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ C C I+ C
Sbjct: 203 LVCTAKNEDCARCPIAEQC 221
>gi|29840684|ref|NP_829790.1| endonuclease III [Chlamydophila caviae GPIC]
gi|29835034|gb|AAP05668.1| endonuclease III [Chlamydophila caviae GPIC]
Length = 214
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 26 EEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
I + +P+PK L + F L+VA+LLS STD VN T LF A Q +
Sbjct: 9 NFIISTLNDLFPNPKPSLTGWETPFQLLVAILLSGNSTDKAVNSVTPELFSAAPDAQALA 68
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ KL I G+ ++K+ + LS I+ ++ + P +LE LT+LPG+GRK A+V
Sbjct: 69 KLPLDKLYFIISPCGLGKRKAAYLHDLSKIISEKYRGEPPASLELLTKLPGVGRKTASVF 128
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + + + T VDTHI R++ R G++ ++P+ E+ L+R + H L+ + R
Sbjct: 129 LGIIYNMATFPVDTHILRLAQRWGISNKRSPSAAEKDLVRFFGDMNSPKLHLQLIYYARN 188
Query: 205 VCKARKPQCQSCIISNL 221
C A +C I +
Sbjct: 189 YCPALHHDVNTCRICSH 205
>gi|318076625|ref|ZP_07983957.1| A/G-specific adenine glycosylase [Streptomyces sp. SA3_actF]
Length = 292
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P +
Sbjct: 3 AWYEANARDLPWRRPEAGAWGVMVSEFMLQQTPVARVLPVYEEWMRRWPRPADLAKEPSG 62
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P+ L LPGIG A + S A+
Sbjct: 63 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPEHHAQLLALPGIGEYTAAAVASFAY 121
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + R+ +P + G
Sbjct: 122 GQRHAVLDTNVRRVLARAVSGEQFPPNATTAAERRLARSVLPEDEDTAARWAAASMELGA 181
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ +C+SC +S+ C
Sbjct: 182 LVCTAKGERCESCPLSDRC 200
>gi|317179462|dbj|BAJ57250.1| A/G-specific adenine glycosylase [Helicobacter pylori F30]
Length = 328
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + +
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLKA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E ++++P + L +LPGI
Sbjct: 61 FPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F VD +I R+ GL P T ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 180 QALIDLGALICSP-KPKCALCPLNPYC 205
>gi|315607658|ref|ZP_07882653.1| A/G-specific adenine glycosylase [Prevotella buccae ATCC 33574]
gi|315250841|gb|EFU30835.1| A/G-specific adenine glycosylase [Prevotella buccae ATCC 33574]
Length = 335
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 10/205 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I F + + + ++ ++ Q+ + + + +K+ A
Sbjct: 13 ILRWFEAH-GRVLPWRQTHDPYAIWLSEIILQQTRIEQGRPYWERFMQRWPSVEKLAAAS 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E + + +G Y + + I+ P T E + RL G+G A + S+
Sbjct: 72 EDDVLREWQGLGYYSRARNLHKAARQIVELGRF---PDTFETIKRLKGVGDYTAAAVGSI 128
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AF +P VD +++R+ R + + + ++PP + ++ G
Sbjct: 129 AFDLPVAVVDGNVYRVLARHFGISTPINSTEGKKEFAALAQALLPPDKASAYNQGMMDFG 188
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
C C C + C ++
Sbjct: 189 AMQCTP-AADCAGCPLQESCVAYRE 212
>gi|34557146|ref|NP_906961.1| A/G-specific adenine glycosylase [Wolinella succinogenes DSM 1740]
gi|34482862|emb|CAE09861.1| A/G-SPECIFIC ADENINE GLYCOSYLASE EC 3.2.2 [Wolinella succinogenes]
Length = 320
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 10/197 (5%)
Query: 32 FSLKW-PSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKH-LFEIADTPQKMLAI 86
L + + + L + + + ++++ ++ Q+ V + + E T + +
Sbjct: 9 LLLWYQANGRHHLPWRHPLHPYEILISEMMLQQTQVNTVLERFYYPFLERFPTLESIARA 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E ++ R +G Y + H L +P+++ L LPGIG A I
Sbjct: 69 EESEILLAWRGLGYYSRA-----RNLHALAKTCQQGLPRSVSELEGLPGIGAYTARAIAC 123
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
F +D +I RI +R G ++ + + P ++ + L+ G +C
Sbjct: 124 FGFRESVAILDGNIKRILSRFFALLGVGERELWRRAEEFLNPLAAFDHNQALLDVGALLC 183
Query: 207 KARKPQCQSCIISNLCK 223
K + P CQ C +S CK
Sbjct: 184 KPKNPLCQECPLSPWCK 200
>gi|30248087|ref|NP_840157.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
gi|30179972|emb|CAD83967.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
Length = 377
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 14/196 (7%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + + + + V+ ++ Q+ +V + + + +
Sbjct: 32 RHSLPWQGTRDPYAIWVSEVMLQQTQVSSVIPYYQRFMASFPDVASLAGVPVGDVLTLWS 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++ ++ PQ L RLPGIGR A I + AFG +
Sbjct: 92 GLGYYS-RARNLHRAACVIMEQYSGVFPQDAATLQRLPGIGRSTAAAIAAFAFGERGTIL 150
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IPPKHQYN-----AHYWLVLHGRYVC 206
D ++ RI R G K VE+ L ++ +P + + L+ G VC
Sbjct: 151 DGNVKRILARYFGISGYPGEKSVEERLWQLAESLLPAEESNHQIVVSYTQALMDLGALVC 210
Query: 207 KARKPQCQSCIISNLC 222
+P+CQ C + C
Sbjct: 211 ARSRPRCQYCPLQADC 226
>gi|86605550|ref|YP_474313.1| base excision DNA repair protein [Synechococcus sp. JA-3-3Ab]
gi|86554092|gb|ABC99050.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
JA-3-3Ab]
Length = 222
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 25 LEEIFYLFSLKWPSPKGE-----LY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
LE + + P+ L Y + +V +LS +TD N ++A + L
Sbjct: 2 LESLLARLEQCFGIPQRPRSPDGLPLYPDLLDELVGTILSQNTTDHNSSRAFRALKAAFP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEG 129
+ + +LA KL IR G+ + K+ I + ++ D L
Sbjct: 62 SWEAVLAADPTKLAQVIRPGGLAQLKAARIQEILAAIVKRQGSLSLDFLRDLDDADALAY 121
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L L G+G K A +L G VDTH+ R++NR+GL + P+ L IP
Sbjct: 122 LLSLKGVGLKTAACVLLFGLGRDLCPVDTHVHRVANRLGLVRARHPDDTFAQLSPRIPAG 181
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
Y+ H L+ G+ +CKAR P+C C + + C
Sbjct: 182 KAYSLHVNLIRLGKRICKARMPECGRCPLRHECPS 216
>gi|269986417|gb|EEZ92704.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 229
Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F +++ +LS ++ D A K L +ADTP+K++ + +++ I +G + K++
Sbjct: 28 DPFEVLIHGILSTRTKDTTTFPAQKRLLAVADTPEKIIKLPINQIEKLIYPVGFFHTKAK 87
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ S ++LI EF++K+P T E L +PG+G K A+++L F +P I VDTH+ RIS R
Sbjct: 88 LVKSACNVLIKEFNSKVPSTKEKLMTIPGVGNKVASLVLEWGFNLPYIAVDTHVNRISQR 147
Query: 167 IGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+G+ P G P K E L I+ PK + +Y V GR +C+ P C C + + C
Sbjct: 148 LGIVPEGTKPEKTELILESILNPKLRITTNYSFVKFGREICRPINPLCGKCPVYSYC 204
>gi|284042265|ref|YP_003392605.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM
14684]
gi|283946486|gb|ADB49230.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM
14684]
Length = 241
Score = 88.8 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T + + I + P + +V +LS + D N + A + L E
Sbjct: 22 TRRRVNAIRDKLRDVYGIPIMP-PHEQPLDELVLTVLSQSTNDRNRDVAYERLRERFADW 80
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF-----------DNKIPQTLEG 129
+ +L +++ IR GI + KS+ I + + + D +P
Sbjct: 81 RAVLEAPNAEVEEAIRPGGISKVKSKRIQQILRAIDDSPEGAGLDLSFLRDASVPDGQRY 140
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP-NKVEQSLLRIIPP 188
L LPG+GRK A +L A+G+ + VDTH+ R+ R+ L P ++ +L + P
Sbjct: 141 LCSLPGVGRKTAACVLLFAYGLRDVPVDTHVSRVGMRLRLLRPGAPFEELHDEMLDLSPR 200
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ H L+ HGR C AR+P C +C++ +C +
Sbjct: 201 GQELEFHVNLLRHGRRTCHARRPDCPACVLRRVCPSRR 238
>gi|316970197|gb|EFV54175.1| putative G patch domain-containing protein 1-like protein
[Trichinella spiralis]
Length = 1154
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A L + + K+L E L I +G + K++ I
Sbjct: 963 YQILLSLMLSSQTKDEITAAAMTSLKKYGCSVNKILQTDESDLAELIYPVGFCKSKAKYI 1022
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL +++D IP++++ L +LPG+G K A + + A+ I VDTH+ RISNR+
Sbjct: 1023 KKTTEILQSQYDGDIPKSVDELCQLPGVGPKMALLTMLTAWNQCEGIAVDTHVHRISNRL 1082
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G +P K P + + L +P + + LV G+ VC P C +C+ ++C
Sbjct: 1083 GWLPSPTKQPEQTRKGLENWLPKSYWPQINKLLVGFGQTVCLPVNPHCSNCLNFSICPH 1141
>gi|54310251|ref|YP_131271.1| putative A/G-specific adenine glycosylase [Photobacterium profundum
SS9]
gi|46914692|emb|CAG21469.1| putative A/G-specific adenine glycosylase [Photobacterium profundum
SS9]
Length = 319
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + E T Q + A + ++ + +G Y ++ N+ + I++
Sbjct: 1 MLQQTQVATVIPYFERFMERFPTVQDLAAAEQDEVLHLWTGLGYYA-RARNLHKAAQIIV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+E + P ++ + LPGIGR A +LS++ +D ++ R R G
Sbjct: 60 SEHNGMFPTDIDQVQALPGIGRSTAGAVLSLSLKQHHAILDGNVKRTLARCYAVEGWPGK 119
Query: 177 K-VEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
K VE +L + P + ++ G +C KP+C+ C I +C+
Sbjct: 120 KPVENALWEIAEKNTPDSGVERYNQAMMDMGAMICTRSKPKCELCPIEAMCEA 172
>gi|320593921|gb|EFX06324.1| hypothetical protein CMQ_6645 [Grosmannia clavigera kw1407]
Length = 678
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 40/219 (18%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + ++ +++ Q+ V + + A + R +G Y + +
Sbjct: 218 AYEVWISEIMAQQTRIPVVVAYWTRWMARWPAVEDLAAAPPDDVMAAWRGLGYYSRANRL 277
Query: 108 IISLSHILINEFDNKIPQTLEG--LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ ++ + T + R+PG+GR A I ++ FG P VD ++ R+ +
Sbjct: 278 HAAARAVVAAPDLRGLLPTDPADLVARVPGVGRYTAGAIAAIVFGCPAAMVDGNVVRVLS 337
Query: 166 RI-----------------GLAPGKTPNKVEQS--------------------LLRIIPP 188
R A V L I+P
Sbjct: 338 RQLGLYADSKTDKATVDLLWAAAEALVRAVAADGDGDDHTREVKQEVDGNNSNSLEILPS 397
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC KP C +C I + C+ +
Sbjct: 398 DRPGRWGQALMELGSTVCTP-KPDCAACPIRSTCRAFAE 435
>gi|10954471|ref|NP_039762.1| hypothetical protein pFV1_p10 [Methanothermobacter
thermautotrophicus]
gi|232205|sp|P29588|GTMR_METTF RecName: Full=G/T mismatches repair enzyme; AltName: Full=Mismatch
glycosylase; Short=MIG; AltName: Full=Thymine-DNA
glycosylase
gi|18655713|pdb|1KEA|A Chain A, Structure Of A Thermostable Thymine-Dna Glycosylase
gi|809723|emb|CAA48433.1| unnamed protein product [Methanothermobacter thermautotrophicus]
Length = 221
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 21 TPKELEEIFYLFSLKWPSPK--GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
K + + + + + + + +++ +L ++T +V K F
Sbjct: 6 NKKRKVFVSTILTFWNTDRRDFPWRHTRDPYVILITEILLRRTTAGHVKKIYDKFFVKYK 65
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ +L + ++ I+ IG+ +++E + L+ ++IN++ ++P+ + + LPG+G+
Sbjct: 66 CFEDILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGK 125
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRI----GLAPGKTPNKVEQSLLRIIPPKHQYNA 194
++ +AFG VD + R+ NR + + ++P +
Sbjct: 126 YTCAAVMCLAFGKKAAMVDANFVRVINRYFGGSYENLNYNHKALWELAETLVPGGKCRDF 185
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ +C RKP+C+ C +S LC ++
Sbjct: 186 NLGLMDFSAIICAPRKPKCEKCGMSKLCSYYEK 218
>gi|18075694|emb|CAD11259.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 328
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + +L + N + + ++ ++S Q+ + V + F A
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQIITVVERFYSPFLKA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E ++++P + L +LPGIG
Sbjct: 61 FPTLKDLANAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQNLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F T VD ++ R+ GL P ++ + +N +
Sbjct: 121 AYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLNLNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 181 ALIDLGALICSP-KPKCAICPFNPYC 205
>gi|323454152|gb|EGB10022.1| hypothetical protein AURANDRAFT_23074 [Aureococcus anophagefferens]
Length = 235
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 9/182 (4%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + + A E+ +Q +G Y +
Sbjct: 56 AYRVWVSEVMLQQTQVSRVAPYFERWMAKWPDVHALAAAPEEDVQALWSGLGYY--RRCK 113
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ + + P T ++ G+G A + S+ +G VD ++ R+ +R+
Sbjct: 114 FLREGAAALAAPGAQWPTTRADWLKVKGVGPYTAAAVSSIVYGEACPVVDGNVVRVVSRL 173
Query: 168 GLAPGKTPNKV-----EQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
+ V + +++P +A+ ++ G VC P C C +
Sbjct: 174 AACGVAPSSTVGAKLWWRLAAQLVPADAARPGDANQAMMELGATVCTKANPACGDCPVKA 233
Query: 221 LC 222
C
Sbjct: 234 TC 235
>gi|308481910|ref|XP_003103159.1| CRE-NTH-1 protein [Caenorhabditis remanei]
gi|308260264|gb|EFP04217.1| CRE-NTH-1 protein [Caenorhabditis remanei]
Length = 299
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + +K+L L+ + +G Y++K+ +
Sbjct: 67 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIEKILEFPVPDLERILCPVGFYKRKAVYL 126
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL++++ IP +L+GL LPG+G K AN+++ +A+ I VDTH+ RISNR+
Sbjct: 127 QQTAKILVDKYSGDIPDSLDGLCSLPGVGPKMANLVMQIAWNKCEGIAVDTHVHRISNRL 186
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G TP K ++L ++P ++ LV G+ +C+ +P+C +C+ C
Sbjct: 187 GWIKTDTPEKTRKALEILLPKSEWQPINHLLVGFGQMLCQPLRPKCSTCLCRFTCPS 243
>gi|295397056|ref|ZP_06807169.1| A/G-specific adenine glycosylase [Aerococcus viridans ATCC 11563]
gi|294974707|gb|EFG50421.1| A/G-specific adenine glycosylase [Aerococcus viridans ATCC 11563]
Length = 412
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 9/204 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++ F + L + + + + V+ ++ Q+ V T +
Sbjct: 38 QDFRKTFLDWYDKESRRLPWRESKDPYRIWVSEIMLQQTRVDTVIGYYARFLAAFPTIKA 97
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E +L +G Y + N+ + + ++ + + P L + RL GIG A
Sbjct: 98 LAEAEEDQLLKVWEGLGYYS-RVRNMQAAAQQIMADHEGIFPDNLADIKRLKGIGPYTAG 156
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYNAHYW 197
I S+AFGIP +D + R+ +R+ + E ++ P + +
Sbjct: 157 AIGSIAFGIPVPAIDGNAMRVISRLFMINADIQKPANRKIFEAVGQYLVDPDRPGDFNQA 216
Query: 198 LVLHGRYVCKARKPQCQSCIISNL 221
++ G +K + + +
Sbjct: 217 IMDLGSSFETPKKAMPELSPLRDF 240
>gi|17545120|ref|NP_518522.1| A/G-specific adenine glycosylase [Ralstonia solanacearum GMI1000]
gi|17427411|emb|CAD13929.1| probable a/g-specific adenine glycosylase protein [Ralstonia
solanacearum GMI1000]
Length = 362
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 18 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTVQALAAAPADDVMAAWA 77
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ E L LPGIGR A I + ++G+ +
Sbjct: 78 GLGYYT-RARNLHRCAQIVVAEHGGAFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 136
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLR-----IIPPKHQYNAHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K VE+++ R + P + L+ G VC +
Sbjct: 137 DGNVKRVFARVFGIDGFPGDKRVEETMWRIAETVLPPADGIQSYTQGLMDLGATVCTRGR 196
Query: 211 PQCQ----SCIISNLCKRIK 226
P C +C + +LC+ +
Sbjct: 197 PACLTGERACPLESLCEARR 216
>gi|116620815|ref|YP_822971.1| helix-hairpin-helix DNA-binding motif-containing protein
[Candidatus Solibacter usitatus Ellin6076]
gi|116223977|gb|ABJ82686.1| helix-hairpin-helix motif [Candidatus Solibacter usitatus
Ellin6076]
Length = 219
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 12/217 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + + + L + S Y+ + + ++V+ LL ++ V++ +
Sbjct: 1 MESHQRATLVRRLLLKWFRSSGRSFYWRENRDPYVVLVSELLLKKTAAPVVDRFLPAFLK 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ L ++ +G+ +++ + +L+ + D +P T + L LPG
Sbjct: 61 RFPDFASLSRARHATLVRILQPLGLSDQRAGQLRALAQAISGSKDGCVPATRQDLLALPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE--------QSLLRIIP 187
+G AN +L ++FG VDT++ RI R + +P
Sbjct: 121 VGEYTANSLLCVSFGQAVPVVDTNVARIVMRAFGIGHSRCEARRSPEIWGLAADITGNVP 180
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ L+ G VC AR P+C+ C +S++C+
Sbjct: 181 T-RAVEVNWALLDLGANVCTARTPRCRDCPVSSICRS 216
>gi|113866408|ref|YP_724897.1| A/G-specific adenine glycosylase [Ralstonia eutropha H16]
gi|113525184|emb|CAJ91529.1| A/G-specific adenine glycosylase [Ralstonia eutropha H16]
Length = 392
Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 79/201 (39%), Gaps = 19/201 (9%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + T Q + A ++
Sbjct: 36 RHDLPWQNTRDPYRIWLSEIMLQQTQVSAVIDYFQRFVSQLPTVQALAAAPADQVMALWA 95
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++E + P L LPGIGR A I + + G+ + +
Sbjct: 96 GLGYYS-RARNLHRCAMQVVSEHGGRFPTDPAVLATLPGIGRSTAAAIAAFSAGVRSPIL 154
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI----IP------PKHQYNAHYWLVLHGRYV 205
D ++ R+ R G + VE + ++ +P + L+ G V
Sbjct: 155 DGNVKRVFARCFGIHGHPGERVVETRMWQLAELALPAAGPRQAEDMIAYTQGLMDLGATV 214
Query: 206 CKARKPQC----QSCIISNLC 222
C KP C +C +S C
Sbjct: 215 CSRGKPACLADAGACPLSADC 235
>gi|187927363|ref|YP_001897850.1| A/G-specific adenine glycosylase [Ralstonia pickettii 12J]
gi|309779936|ref|ZP_07674690.1| A/G-specific adenine glycosylase [Ralstonia sp. 5_7_47FAA]
gi|187724253|gb|ACD25418.1| A/G-specific adenine glycosylase [Ralstonia pickettii 12J]
gi|308921295|gb|EFP66938.1| A/G-specific adenine glycosylase [Ralstonia sp. 5_7_47FAA]
Length = 382
Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 14/198 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + ++ ++ Q+ V E T Q + A +
Sbjct: 38 RHHLPWQNTGDAYRTWLSEIMLQQTQVSAVLGYYARFIERFPTVQALAAAPADDVMAAWA 97
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ + L LPGIGR A I + ++G+ +
Sbjct: 98 GLGYYT-RARNLHRCAQIVVAEHGGIFPRDPDVLVALPGIGRSTAAAIAAFSYGVRAAIL 156
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLR-----IIPPKHQYNAHYWLVLHGRYVCKARK 210
D ++ R+ R G +K VE ++ R + P + L+ G VC K
Sbjct: 157 DGNVKRVFARAFGIDGFPGDKRVEDTMWRIAETVLPPAEGIQPYTQGLMDLGATVCTRGK 216
Query: 211 PQCQ----SCIISNLCKR 224
P C +C + +LC+
Sbjct: 217 PACLTGERACPLESLCEA 234
>gi|290958389|ref|YP_003489571.1| adenine glycosylase [Streptomyces scabiei 87.22]
gi|260647915|emb|CBG71020.1| putative adenine glycosylase [Streptomyces scabiei 87.22]
Length = 313
Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 65/198 (32%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + ++V+ + Q+ V + P + +
Sbjct: 34 WFETHARDLPWRRPEAGPWGVMVSEFMLQQTPVNRVLPVYEQWLARWPRPADLAKEPPGE 93
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P+ L LPGIG A + S A+G
Sbjct: 94 AVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPRDHAQLLALPGIGEYTAAAVASFAYG 152
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH--QYNAHYWLVLHGRY 204
+DT++ R+ R PN + ++P + G
Sbjct: 153 QRHAVLDTNVRRVLARAVSGTQYPPNATTAAERKLARALLPEDDGTASRWAAASMELGAL 212
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ C C I+ C
Sbjct: 213 VCTAKNETCGRCPIAGQC 230
>gi|113954882|ref|YP_729339.1| A/G-specific adenine glycosylase [Synechococcus sp. CC9311]
gi|113882233|gb|ABI47191.1| putative A/G-specific adenine glycosylase [Synechococcus sp.
CC9311]
Length = 384
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 62/195 (31%), Gaps = 11/195 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
++N + + VA ++ Q+ V + E T + + + + + +G Y
Sbjct: 43 PYEHLNPYPIHVAEVMLQQTQLQVVLPYWQRWMESFPTLESLAEAEAQMVLLSWQGLGYY 102
Query: 102 RKKSENII------SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+ E PQ LPGIG A ILS AF P
Sbjct: 103 SRARRLHGSAQTLLERIGCQSCEDPLSWPQEPGFWLDLPGIGLSTAGGILSSAFNSPLAI 162
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSL---LRIIP--PKHQYNAHYWLVLHGRYVCKARK 210
+D ++ R+ R + ++ P + + L+ G VC R
Sbjct: 163 LDGNVRRVLARFRAHSRPPTRDLRLFWNWSEALVEAAPGRARDLNQALMDLGATVCIPRS 222
Query: 211 PQCQSCIISNLCKRI 225
P C C C
Sbjct: 223 PNCACCPWQMHCSAY 237
>gi|108562565|ref|YP_626881.1| DNA glycosylase MutY [Helicobacter pylori HPAG1]
gi|107836338|gb|ABF84207.1| A/G-specific adenine glycosylase [Helicobacter pylori HPAG1]
Length = 328
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKGLPFRNLKGINAPYEVYISEVMSQQTQINTVIERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E ++++P + L +LPGI
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD +I R GL P T ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKSACVDANIKRTLLRLFGLNPNITAKDLQIKANDFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 180 QALIDLGALICSP-KPKCTICPLNPYC 205
>gi|317013561|gb|ADU80997.1| DNA glycosylase MutY [Helicobacter pylori Gambia94/24]
Length = 328
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+E + + + L + N + + ++ ++S Q+ V + F A
Sbjct: 1 METLHNALLKWYEEFGRKGLPFRNLKGINAPYEVYISEVMSQQTQINTVVERFYSPFLEA 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K LA + + + Y +++N+ + I + E +++P + L +LPGIG
Sbjct: 61 FPTLKDLANAQLEKVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIG 120
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
AN IL F T VD ++ R+ GL P ++ + +N +
Sbjct: 121 AYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFNHNQ 180
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 181 ALIDLGALICSP-KPKCAICPFNPYC 205
>gi|305432424|ref|ZP_07401586.1| A/G-specific adenine glycosylase [Campylobacter coli JV20]
gi|304444463|gb|EFM37114.1| A/G-specific adenine glycosylase [Campylobacter coli JV20]
Length = 339
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 91/221 (41%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVN---------------HFTLIVAVLLSAQSTD 63
+ ++ + L + + + L + N + + ++ ++ Q+
Sbjct: 1 MQKQMIQNLQDKLLLWYDKNGRKNLPWRNLESKDCDERLKDIDRAYGVYISEIMLQQTQV 60
Query: 64 VNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+V K + T Q + E +L + +G Y ++ N+ + +++F+ K
Sbjct: 61 KSVLEKFYFPFLQKFPTLQSLAKANEDELLKAWQGLGYYT-RARNLKKAALECVDKFEGK 119
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL 182
+P+ L+ L L GIG A I A+ VD +I R+ +R+ +++E+
Sbjct: 120 LPKKLDELKNLSGIGTYTAGAIACFAYDQKVSFVDGNIRRVLSRLFALENPKMSELERKA 179
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ +N + L+ G +C ++ +C C + + C+
Sbjct: 180 KELLNLADAFNHNQALLDIGALICVSKNAKCGICPLYDFCQ 220
>gi|330443938|ref|YP_004376924.1| putative endonuclease III [Chlamydophila pecorum E58]
gi|328807048|gb|AEB41221.1| putative endonuclease III [Chlamydophila pecorum E58]
Length = 206
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 27 EIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
I +P+PK L + F L++A+LLS STD VN T LF A M
Sbjct: 4 FILSTLDTLFPNPKPSLTGWSTPFQLLIAILLSGNSTDKAVNSLTPRLFREAPDAFTMAR 63
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ L I G+ ++KS I L+ +L+ +F + P+ + L +LPG+GRK A+V L
Sbjct: 64 LPLNTLYELIAPCGLGQRKSLYIHHLATLLLEKFHGEPPREMGLLMQLPGVGRKTASVFL 123
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
S+ + +PT VDTHI R+S+R G++ K+P E+ L+ K H L+ + R
Sbjct: 124 SIIYQLPTFPVDTHILRLSHRWGISKKKSPLAAEKDLVAFFGDKVSPKLHLQLISYARKF 183
Query: 206 CKARKPQCQSCIIS 219
C A + Q C I
Sbjct: 184 CPALHHKIQHCPIC 197
>gi|261837593|gb|ACX97359.1| A/G-specific adenine glycosylase [Helicobacter pylori 51]
Length = 328
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + +L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVVERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E D+++P + L +LPGI
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F + VD +I R+ GL T ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKSACVDANIKRVLLRLFGLDSNITAKDLQIKANGFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C ++ C
Sbjct: 180 QALIDLGALICSP-KPKCALCPLNPYC 205
>gi|328720736|ref|XP_001949525.2| PREDICTED: endonuclease III-like protein 1-like [Acyrthosiphon
pisum]
Length = 280
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L + T +L + L I +G ++ K + I
Sbjct: 91 YHVLISLMLSSQTKDEVNFAAMQRLKQHGLTVDNILETSDDHLGKLIYPVGFWKTKVQYI 150
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ IL + ++ IP T++ L +LPGIG K A++ +S A+ T VDTH+ RISNR+
Sbjct: 151 KRTTRILKDTYNGDIPNTIKDLCQLPGIGPKMAHLCMSCAWNEVTGIGVDTHVHRISNRL 210
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
G KTP +L +P + ++ LV G+ +C+ P C SC+ C
Sbjct: 211 GWVKKATKTPENTRIALESWLPKELWREVNHMLVGFGQTICRPIGPHCDSCLNKKTCPS 269
>gi|172061756|ref|YP_001809408.1| A/G-specific adenine glycosylase [Burkholderia ambifaria MC40-6]
gi|171994273|gb|ACB65192.1| A/G-specific adenine glycosylase [Burkholderia ambifaria MC40-6]
Length = 381
Score = 88.4 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSP-KGELYY---VNHFTLIVAVLLSAQ 60
K P+ L+ + + +L + + + + ++ ++ Q
Sbjct: 15 KPPRIAPAPFPVTPLH-----RTFATRLIAWQRTHGRHDLPWQNTRDPYRIWLSEIMLQQ 69
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ V E + A + +G Y ++ N+ + +++ E
Sbjct: 70 TQVSTVIPYYLRFLERFPDVAALAAAPADDVMALWAGLGYYS-RARNLHRCAQVVVAEHG 128
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VE 179
P T + L LPGIGR A I S A+G +D ++ R+ R+ G K VE
Sbjct: 129 GVFPSTPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGFPGEKRVE 188
Query: 180 QSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + +P L+ G +C KP C C C
Sbjct: 189 NDMWALAESLLPDAANEADVSAYTQGLMDLGATLCVRGKPDCARCPFVGDC 239
>gi|42524794|ref|NP_970174.1| A/G-specific adenine glycosylase [Bdellovibrio bacteriovorus HD100]
gi|39577004|emb|CAE78233.1| A/G-specific adenine glycosylase [Bdellovibrio bacteriovorus HD100]
Length = 333
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 12/222 (5%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKAT 70
+ L + + + + + K L + N + + ++ ++ Q+T V V
Sbjct: 2 TTLPRMAAQHDYKTDHKQLTQWYNKNKRSLPWRENKNPYRIWLSEVMLQQTTVVAVIPYF 61
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+ + T Q + E + +G Y + +L P+T L
Sbjct: 62 EKFLQKFPTVQDLANAPEADVMEAWAGLGYYSRAR----NLHKAAKALAAGGFPKTAAEL 117
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
LPG G + + S+AFG +D ++ R+ +R + N + L+ I +
Sbjct: 118 LELPGFGPYTSRAVASIAFGEKVGVLDGNVIRVLSRRYGLKLEWWNGKGRDHLQKISDEL 177
Query: 191 QY-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L+ G VC +K C C + C ++
Sbjct: 178 SLLGQADVVNQGLMELGATVCTPQKVMCMLCPWAATCVSREK 219
>gi|15644772|ref|NP_206942.1| DNA glycosylase MutY [Helicobacter pylori 26695]
gi|2313226|gb|AAD07210.1| A/G-specific adenine glycosylase (mutY) [Helicobacter pylori 26695]
Length = 328
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 11/207 (5%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + L + N + + ++ ++S Q+ V + E
Sbjct: 1 METLHNALLKWYEEFGRKGLPFRNLKGINAPYEVYISEVMSQQTQINTVIERFYSPFLEA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +++ R +G Y +++N+ + I + E +++P + L +LPGI
Sbjct: 61 FPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G AN IL F VD +I R+ GL P ++ + +N +
Sbjct: 120 GAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLNLNESFNHN 179
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C KP+C C + C
Sbjct: 180 QALIDLGALICSP-KPKCAICPFNPYC 205
>gi|198413061|ref|XP_002124717.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 183
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V+++LS+Q+ D A L E T ++ ++KL + I +G ++KK +
Sbjct: 4 FHILVSLMLSSQTKDHVTFAAMSRLIEHGLTIDYIIGTSDEKLGSLIYPVGFWKKKVGYL 63
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN-VILSMAFGIPTIGVDTHIFRISNRI 167
++ EF IP+ +E L +LPG+G K A + + IGVD H+ R+ NR+
Sbjct: 64 KRACIMMKEEFGGDIPKCVESLVKLPGVGPKMAYLTMTCAWGIVVGIGVDVHVHRVCNRL 123
Query: 168 GLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G G K P + L + +P ++ + LV G+ VC P+CQ C+ N+C +
Sbjct: 124 GWVQGTKQPEQTRLQLQQWLPRENWREINSLLVGFGQQVCLPVAPKCQECLNKNICPSAR 183
>gi|115700148|ref|XP_793669.2| PREDICTED: similar to nth endonuclease III-like 1 (E. coli)
[Strongylocentrotus purpuratus]
gi|115945409|ref|XP_001190726.1| PREDICTED: similar to nth endonuclease III-like 1 (E. coli)
[Strongylocentrotus purpuratus]
Length = 395
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D + A L T +L E K+ I +G +++K++ I
Sbjct: 193 YHVLLSLMLSSQTKDQVTSAAMVKLRSHGLTVDNILKTPEAKIGELIYPVGFWKRKADFI 252
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ IL +++ IP +L+ L +LPG+G K A++++ + + T VDTH+ RISNR+
Sbjct: 253 KRTTQILKDQYQGDIPPSLKELIQLPGVGPKMAHIVMDVGWNQITGIGVDTHVHRISNRL 312
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP SL +P + LV G+ C P+C C+ ++C
Sbjct: 313 KWVQKETKTPEATRVSLEDWLPRDLWSEVNVLLVGFGQQTCLPVGPRCLECLNKDICPFG 372
Query: 226 KQ 227
KQ
Sbjct: 373 KQ 374
>gi|118431238|ref|NP_147565.2| U/G and T/G mismatch-specific DNA glycosylase [Aeropyrum pernix K1]
gi|116062561|dbj|BAA79857.2| U/G and T/G mismatch-specific DNA glycosylase [Aeropyrum pernix K1]
Length = 223
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 11/217 (5%)
Query: 20 YTPKELEEIFYLFSLKWP-SPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+E + + +L + N + ++VA L ++T V + +
Sbjct: 4 LDKGRIEALRRRLIEWYRVYGDKDLPWRNTADPWAILVAAFLLRKTTARQVVRVYEEFLR 63
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
P+ + + E +++ IR +GI ++++++I L+ + + +IP + E L LPG
Sbjct: 64 RYPNPKALASAREDEVRELIRPLGIEHQRAKHLIELAKHIEARYGGRIPCSKEKLKELPG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQSLLRIIPPK- 189
+G A+ +L A G P +D ++ RI R+ T K+ + RI+P
Sbjct: 124 VGDYIASEVLLAACGSPEPLLDRNMIRILERVLGVKSAKKRPHTDPKMWSTARRIVPKDP 183
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+Y ++ R +C ARKP C C ++++C
Sbjct: 184 DMAKEFNYGMLDLARKICTARKPLCTECPLNDICIYY 220
>gi|281342124|gb|EFB17708.1| hypothetical protein PANDA_016228 [Ailuropoda melanoleuca]
Length = 266
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 84 YQVLLSLMLSSQTKDQVTAGAMQRLRSRGLTVDSILQTDDSTLGTLIYPVGFWRSKVKYI 143
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP T+ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 144 KQTSAILQQRYGGDIPATVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 203
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G K+P K +L +P + + LV G+ VC P+CQ C+ LC
Sbjct: 204 GWTETATKSPEKTRAALEAWLPRELWSEINGLLVGFGQQVCLPTHPRCQDCLNRGLCPAA 263
Query: 226 K 226
+
Sbjct: 264 Q 264
>gi|294789557|ref|ZP_06754792.1| A/G-specific adenine glycosylase [Simonsiella muelleri ATCC 29453]
gi|294482494|gb|EFG30186.1| A/G-specific adenine glycosylase [Simonsiella muelleri ATCC 29453]
Length = 339
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 8/188 (4%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
+ + + ++ ++ Q+ V + Q + + + +G Y
Sbjct: 21 PWQTSDPYRVWLSEIMLQQTQVATVLEYYPKFINRFPDVQSLAEAEQDAVLQLWAGLGYY 80
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
++ N+ + ++ EF + PQ L RL G+GR A I + AF P +D ++
Sbjct: 81 S-RARNLHKAAQQIVYEFGGQFPQQRIELERLCGVGRSTAAAIAAFAFRQPETILDGNVK 139
Query: 162 RISNRIGLAPGKTPNKVEQSL-----LRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQ 214
R+ RI G T +K ++ ++P L+ G VCK KP C
Sbjct: 140 RVLCRIFALDGDTSDKKFEAQLWQLAESLLPKNQNDMPVYTQGLMDLGATVCKRSKPDCT 199
Query: 215 SCIISNLC 222
C + + C
Sbjct: 200 HCPMVSDC 207
>gi|302844277|ref|XP_002953679.1| hypothetical protein VOLCADRAFT_118405 [Volvox carteri f.
nagariensis]
gi|300261088|gb|EFJ45303.1| hypothetical protein VOLCADRAFT_118405 [Volvox carteri f.
nagariensis]
Length = 835
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 57/264 (21%)
Query: 1 MVSSKKSDSYQGNSPLGCLY-TPKELEEIFYLFSLKWPSPKGELYYVN------------ 47
+ S+ P G + T +E++E + L +
Sbjct: 61 LPKSRVGPKTGVAHPSGKPWFTEQEVKEYRRELLAWYDHNHRVLPWRRTPHSKKANAGAA 120
Query: 48 --------------------------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + V+ ++ Q+ V T
Sbjct: 121 EVVAPEGERGSQAAEAAPADLPQQQFAYWVWVSEVMLQQTQVATVIPYFNRWVTKWPTVA 180
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + +G YR ++ ++ + ++ + D K P T L ++P +
Sbjct: 181 DLAAADIDAVNALWAGLGYYR-RARYLLDGARYVVEKLDGKFPTTAAELLKIPAVDGNVI 239
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
V+ + ++ P+ + L+
Sbjct: 240 RVVSRLRALPGDPTKLAATHAAMA-----------------SELLDPQRPGCYNQALMEL 282
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
G VC+ P C +C + +C+ +
Sbjct: 283 GATVCRPVNPSCAACPVRGVCRAV 306
>gi|282856173|ref|ZP_06265456.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Pyramidobacter piscolens W5455]
gi|282585932|gb|EFB91217.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Pyramidobacter piscolens W5455]
Length = 234
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 12/212 (5%)
Query: 25 LEEIFYLFSLKWPSPK--GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + W ++ Y ++ +LS + D N + A + L + +
Sbjct: 20 ITAVLEILEQLWKQGTDSAKIVYEEPLDGLIETVLSQNTNDRNRDMAFERLKSRYGSWDR 79
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK---------IPQTLEGLTRL 133
+ A+ + ++ I+ GI K+ I+ + + F + +T +
Sbjct: 80 VAALPQDRIAEAIKPAGICNNKAATILRVLKTVKERFGEYSLKRLKSGTPAAAWDFMTHI 139
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQY 192
G+G K A +L+ G P VDTH+ RIS R+G A K TP +++ L R++P +
Sbjct: 140 QGVGPKTAACVLAFDLGFPAFPVDTHVARISKRLGWADAKETPAEIQARLERLVPDGMKC 199
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H ++ HG+ +CKAR P+C C + +C
Sbjct: 200 AGHLDVIQHGKNICKARAPKCGECPLRGICPS 231
>gi|157103485|ref|XP_001648002.1| endonuclease iii [Aedes aegypti]
gi|108880533|gb|EAT44758.1| endonuclease iii [Aedes aegypti]
Length = 396
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 18/242 (7%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIF---YLFSLKWPSPKGEL---YYVNH--------- 48
KS S + P +I P+P + + +
Sbjct: 136 EDKSPLEAEASVKQAKWEPDNWRQILDNIRQMRQMMPAPVDTMGCDQFKDDQTVPAKIRR 195
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +V+++LS+Q+ D + + L + TP+ ++A L+ I + Y+ K++ I
Sbjct: 196 YHTLVSLMLSSQTKDQVNFECMQRLRKHGLTPENVVATDVAVLEKLIYPVSFYKNKAKFI 255
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL++ +D IP T++GL +LPG+G+K A++ + A+ + T VDTH+ RI N +
Sbjct: 256 KQSSQILLDSYDGDIPDTIDGLLKLPGVGKKMAHLCMRSAWNVVTGIGVDTHVHRICNWL 315
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP +L + +P + + LV G+ +C A P C C+ + +C
Sbjct: 316 QWVPKQTKTPEDTRVALEKWLPFELWEEVNQLLVGFGQTICPATNPYCNECLNATICPAK 375
Query: 226 KQ 227
+
Sbjct: 376 GK 377
>gi|333025272|ref|ZP_08453336.1| putative A/G-specific adenine glycosylase [Streptomyces sp. Tu6071]
gi|332745124|gb|EGJ75565.1| putative A/G-specific adenine glycosylase [Streptomyces sp. Tu6071]
Length = 350
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + ++V+ + Q+ V + P +
Sbjct: 61 AWYEANARDLPWRRPEAGAWGVMVSEFMLQQTPVARVLPVYEEWMRRWPRPADLAKEPSG 120
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P+ L LPGIG A + S A+
Sbjct: 121 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPEHHAQLLALPGIGEYTAAAVASFAY 179
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + R+ +P + G
Sbjct: 180 GQRHAVLDTNVRRVLARAVSGEQFPPNATTAAERRLARSVLPEDEDTAARWAAASMELGA 239
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ +C+SC +S+ C
Sbjct: 240 LVCTAKGERCESCPLSDRC 258
>gi|322692696|gb|EFY84590.1| A/G-specific adenine glycosylase [Metarhizium acridum CQMa 102]
Length = 597
Score = 88.0 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
+ L + + ++ ++ Q+ V + T Q + A + + R +G
Sbjct: 152 RTSLE-RRAYEVWISEIMLQQTRVAVVIDYWNRWMDKWPTIQDLAAADPEDVLAAWRGLG 210
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLT--RLPGIGRKGANVILSMAFGIPTIGVD 157
Y + + + ++ + + + ++PG+GR A I ++ FG T VD
Sbjct: 211 YYSRATRIHEASKLVVEDPTMQGLLPSDTHELEAKVPGVGRYTAGAISAIVFGRATPMVD 270
Query: 158 THIFRISNRIGLAPGKTPNK------VEQSLLRII--------PP----KHQYNAHYWLV 199
++ R+ +R G + + ++ P L+
Sbjct: 271 GNVLRVLSRQLGIYGNIKTDKKVIDFIWAAADALVQAVAPLRPPKTHVSDRPGRWGQALM 330
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC KP C C ++ C+ +
Sbjct: 331 ELGSTVCTP-KPNCSQCPVTGSCRVYNE 357
>gi|301782301|ref|XP_002926577.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Ailuropoda melanoleuca]
Length = 316
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 131 YQVLLSLMLSSQTKDQVTAGAMQRLRSRGLTVDSILQTDDSTLGTLIYPVGFWRSKVKYI 190
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP T+ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 191 KQTSAILQQRYGGDIPATVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 250
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G K+P K +L +P + + LV G+ VC P+CQ C+ LC
Sbjct: 251 GWTETATKSPEKTRAALEAWLPRELWSEINGLLVGFGQQVCLPTHPRCQDCLNRGLCPAA 310
Query: 226 K 226
+
Sbjct: 311 Q 311
>gi|171184578|ref|YP_001793497.1| DNA-(apurinic or apyrimidinic site) lyase [Thermoproteus
neutrophilus V24Sta]
gi|170933790|gb|ACB39051.1| DNA-(apurinic or apyrimidinic site) lyase [Thermoproteus
neutrophilus V24Sta]
Length = 222
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 34 LKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKL 91
++ +P N F L+VAV+LS ++D N KA L + TP+ + + E++L
Sbjct: 16 EEFIAPVVWRSGGNLFELVVAVVLSQNTSDKNAFKAFNSLKRALGSITPEAVAKLAEEEL 75
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE-------GLTRLPGIGRKGANVI 144
I+ G+YR ++ + +L+ + L LPG+G+K A+V+
Sbjct: 76 AALIKPAGMYRIRARALKALAEAFLKHGITPQRLLEMGAERARAFLMSLPGVGKKTADVV 135
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L + G+P VDTHI RI+ R G+ G++ +++ + + +PP H L+ GR
Sbjct: 136 L-VNIGLPAFPVDTHITRIARRWGI--GRSYDEISRWFMDRLPPARYLEFHLKLIQFGRD 192
Query: 205 VCKARKPQCQSCIISNLCKRIK 226
VC+AR P+C C I C K
Sbjct: 193 VCRARSPRCGVCPIGERCPSFK 214
>gi|323356816|ref|YP_004223212.1| A/G-specific DNA glycosylase [Microbacterium testaceum StLB037]
gi|323273187|dbj|BAJ73332.1| A/G-specific DNA glycosylase [Microbacterium testaceum StLB037]
Length = 288
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 12/201 (5%)
Query: 32 FSLKWPSPKGELYYVN----HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + +V+ + Q+ V + TP + A
Sbjct: 8 LIAWYRDAARDLPWRREGFGAWGTLVSEFMLQQTPVARVIPHLEAWLARWPTPTDLAASP 67
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + + + D +P+ ++ L L GIG A +
Sbjct: 68 PAEAVTQWANLGYPRRAL-WLHRAAVEIRDRHDGVVPRDVDALLALTGIGDYTARAVAVF 126
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL------VLH 201
A+G VDT+ R+ R + + L + + + +
Sbjct: 127 AYGDRHPVVDTNTRRVLARAVEGRAQPGPPHRRD-LERMDAELPDDIAASAIVNAAAMEL 185
Query: 202 GRYVCKARKPQCQSCIISNLC 222
G VC AR P+C C ++ C
Sbjct: 186 GAIVCTARSPKCDLCPLAAQC 206
>gi|195030160|ref|XP_001987936.1| GH10834 [Drosophila grimshawi]
gi|193903936|gb|EDW02803.1| GH10834 [Drosophila grimshawi]
Length = 373
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +VA++LS+Q+ D +A K L TP M ++ L+N + + Y+ K++ +
Sbjct: 178 FHKLVALMLSSQTKDETTFEAMKRLKAQTLTPASMQSMPVGVLENLLHPVSFYKNKAKYL 237
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S IL+++++ IP + L +LPG+G K A++ ++ A+ T VDTH+ RI+NR+
Sbjct: 238 KKTSQILVDKYNEDIPDNIPELLKLPGVGPKMAHICMATAWNQITGIGVDTHVHRIANRL 297
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
K P + L +P + ++ V G+ VC +P C C+ ++C
Sbjct: 298 AWLSKSTKEPEQTRIQLETWLPRQLWAEVNHLFVGFGQTVCTPLRPNCSECLNRDICPA 356
>gi|255939103|ref|XP_002560321.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584943|emb|CAP82982.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 428
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 42/263 (15%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE----------LYYVNH----F 49
++K+ G+ + +++ I P+ + F
Sbjct: 139 ARKTRDIDGSVKVEPPSNWEKMYGIVQEMRKDGPAADAPVDTMGCSQLFWRASSPIDRRF 198
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK------------------- 90
+VA++LS+Q+ D A + L + K
Sbjct: 199 QTLVALMLSSQTKDTVTAVAMQRLHTELGDGTAPAQDIKIKQEDDDSKTVDSTLNLNNIL 258
Query: 91 ------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
L IRT+G + K++ I + + IL ++ IP T EGL LPG+G K A +
Sbjct: 259 SVDPTRLNELIRTVGFHNNKTKYIKATALILRDQHGGDIPSTPEGLMALPGVGPKMAYLC 318
Query: 145 LSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+S A+G VD H+ RI+N G KTP + ++L +P + ++ LV G+
Sbjct: 319 MSAAWGEHVGIGVDVHVHRITNLWGWNKTKTPEETREALQSWLPRNKWHEINHLLVGLGQ 378
Query: 204 YVCKARKPQCQSCIIS--NLCKR 224
VC K +C C ++ LCK
Sbjct: 379 TVCLPVKRRCGDCELARLRLCKS 401
>gi|157871896|ref|XP_001684497.1| A/G-specific adenine glycosylase [Leishmania major strain Friedlin]
gi|68127566|emb|CAJ05658.1| putative A/G-specific adenine glycosylase [Leishmania major strain
Friedlin]
Length = 501
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 22/200 (11%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS- 105
+ + + V+ ++S Q+ V + + + + A E ++++ +G YR+
Sbjct: 79 DPYQVWVSEVMSQQTRMETVIPYYVAWMKRFPSIEALAASTEDEVKSVWAGMGYYRRAMY 138
Query: 106 -----ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ ++ S +P + E L ++PGIG + I SM FG P VD ++
Sbjct: 139 LRKGAKYLLERSKEKEGTAAVCMPSSQEELLKVPGIGPYTSAAITSMCFGKPVCSVDGNV 198
Query: 161 FRISNRIGLAPGKTP------NKVEQSLLRI---------IPPKHQYNAHYWLVLHGRYV 205
R+ +R+ A P + R+ + + + L+ G V
Sbjct: 199 IRVLSRLRGARDFDPKVPANVKEAAAWGQRLMGNSPTTSAVVCQDPSALNQGLMELGASV 258
Query: 206 CKAR-KPQCQSCIISNLCKR 224
C+ P C SC + C+
Sbjct: 259 CRPSGAPLCTSCPLQRFCRA 278
>gi|126335528|ref|XP_001366843.1| PREDICTED: similar to Escherichia coli endonuclease III-like 1
[Monodelphis domestica]
Length = 292
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A L E T +L + + L I +G +R K + I
Sbjct: 110 YQVLLSLMLSSQTKDQVTAAAMGRLRERGLTLDNILQMDDNTLGQLIYPVGFWRSKVQYI 169
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
S IL ++ IP T+ L LPG+G K A++ +++ + I VDTH+ RI+NR+
Sbjct: 170 KQTSKILKQQYGGDIPATVAELVALPGVGPKMAHLAMAIAWDTVSGIAVDTHVHRITNRL 229
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K P + +L +P + ++ LV G+ +C P+C +C+ LC
Sbjct: 230 KWTKKGTKYPEETRAALEDWLPRQLWKEINWLLVGFGQQICLPVNPRCGNCLNRGLCPAA 289
Query: 226 K 226
+
Sbjct: 290 Q 290
>gi|146297020|ref|YP_001180791.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410596|gb|ABP67600.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 149
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/140 (42%), Positives = 93/140 (66%)
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++L+ I+ +G Y+ K+++I + ILI++++ +P ++E LT+L G+GRK ANVI++
Sbjct: 1 MEELERDIKPVGFYKNKAKSIKETAKILIDKYNGALPDSIEALTKLKGVGRKTANVIMAN 60
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
FG+P+I VDTH R+SNRIG K P+K+E L +I+P +V HGR CK
Sbjct: 61 IFGVPSIIVDTHCMRLSNRIGFVKSKDPDKIEFELRKIVPFDMYTTFSNLMVYHGRATCK 120
Query: 208 ARKPQCQSCIISNLCKRIKQ 227
ARKP+C CII+N+C K+
Sbjct: 121 ARKPKCSECIINNVCDFYKR 140
>gi|73959522|ref|XP_853674.1| PREDICTED: similar to Endonuclease III-like protein 1 [Canis
familiaris]
Length = 312
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L + I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRAHGLTVDSILQTDDATLGSLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
T P K +L +P + + LV G+ C +P+C +C+ +LC
Sbjct: 250 RWTRTTTTSPEKTRAALEEWLPRELWGEINGLLVGFGQQTCLPVRPRCGACLNRSLCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|156563964|dbj|BAF76070.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D + A L + T +L + + L I +G +R K + I
Sbjct: 99 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 158
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
+ IL ++ IP T+E L +LPG+G K A++ +++ + I VDTH+ RI+NR+
Sbjct: 159 KQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNRL 218
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ P + +L +P ++ LV G+ C P+C+ C+ ++C
Sbjct: 219 KWVKKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQDICPTA 278
Query: 226 KQ 227
K+
Sbjct: 279 KR 280
>gi|156354363|ref|XP_001623365.1| predicted protein [Nematostella vectensis]
gi|156210057|gb|EDO31265.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++V+++LS+Q+ D A + L T K+L + KL I +G +RKK + I
Sbjct: 44 YQVLVSLMLSSQTKDPVTFAAMEKLKAHGCTVDKILNTSDDKLGEMIYPVGFWRKKVDYI 103
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRI 167
++I ++ IP T+ L LPG+G K A++ +S+A+G IGVDTH+ RI NR+
Sbjct: 104 KKATNICKAQYQGDIPCTISELVELPGVGPKMAHICMSVAWGQLTGIGVDTHVHRICNRL 163
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G P KTP + ++ +P + + LV G+ +C P CQSC+ ++C
Sbjct: 164 GWTKKPTKTPEESRLAVEAWLPREEWSELNVLLVGFGQQICLPVGPNCQSCLNRDICP 221
>gi|288924653|ref|ZP_06418590.1| A/G-specific adenine glycosylase [Prevotella buccae D17]
gi|288338440|gb|EFC76789.1| A/G-specific adenine glycosylase [Prevotella buccae D17]
Length = 335
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 10/205 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I F + + + ++ ++ Q+ + + + +K+ A
Sbjct: 13 ILRWFEAH-GRVLPWRQTHDPYAIWLSEIILQQTRIEQGRPYWERFMQRWPSVEKLAAAS 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E + + +G Y + + I+ P T E + RL G+G A + S+
Sbjct: 72 EDDVLREWQGLGYYSRARNLHKAARQIVELGRF---PDTFETIKRLKGVGDYTAAAVGSI 128
Query: 148 AFGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
AF +P VD +++R+ R + + + ++PP + ++ G
Sbjct: 129 AFDLPVAVVDGNVYRVLARHFGISTPINSTEGKKEFAALAQVLLPPDKASAYNQGMMDFG 188
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
C C C + C ++
Sbjct: 189 AMQCTP-AADCMGCPLQESCVAYRE 212
>gi|219681897|ref|YP_002468283.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471602|ref|ZP_05635601.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219624740|gb|ACL30895.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 350
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 26 EEIFYLF-SLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ IF + + + +L + +T+ ++ ++ Q+T + K
Sbjct: 3 KYIFSQLVLNWYHKNGRKDLPWQINKTLYTVWISEIMLQQTTVKSAIPYFKKFILNFPNI 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G Y +++NI + I+ ++ P + +LPGIGR
Sbjct: 63 KSLNDSKLDDVLYLWSGLGYYN-RAKNIYKSAQIIKKKYKGIFPDQFSNIIQLPGIGRST 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRII----PPKHQYNAH 195
A ILS++ +D ++ RI G++ K+E+ L II P + +
Sbjct: 122 AGAILSLSLNFFYPILDGNVKRILVRYYGISGLLKDKKIEKKLWNIIESITPIHNTGKFN 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + KP+C C + C
Sbjct: 182 QGMMDIGASICISIKPKCTICPLKKEC 208
>gi|222480413|ref|YP_002566650.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
gi|222453315|gb|ACM57580.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
Length = 330
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 80/211 (37%), Gaps = 8/211 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P +L+ + + + E + + + ++V+ ++S Q+ V A + E
Sbjct: 22 PADLDAVRDALVDWYEADHREFPWRRTEDPYEILVSEVMSQQTQLDRVVPAWEDFVEEWP 81
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T +++ + + + Y +++ + + + E+ P+T E L L G+G
Sbjct: 82 TTEELAEADRGGVVAFWSDHSLGYNNRAKYLHEAAGQVEGEYGGTFPETPEELQELMGVG 141
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
AN + S AF VDT++ R+ +R P Q ++P +
Sbjct: 142 PYTANAVASFAFDNGDAVVDTNVKRVLHRAFAVPDDD-AAFAQVASDVMPDGESRIWNNA 200
Query: 198 LVLHGRYVCKARKPQCQS--CIISNLCKRIK 226
++ G C P+C C C +
Sbjct: 201 IMELGGVAC-GTTPRCDEAGCPWRRWCHAYE 230
>gi|19114122|ref|NP_593210.1| DNA endonuclease III [Schizosaccharomyces pombe 972h-]
gi|1351660|sp|Q09907|NTH1_SCHPO RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|1065894|emb|CAA91893.1| DNA endonuclease III [Schizosaccharomyces pombe]
gi|62122683|dbj|BAD93307.1| DNA endonuclease III [Schizosaccharomyces pombe]
Length = 355
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 22 PKELEEIFYLFSLKWPSPKGELY---------YVNH----FTLIVAVLLSAQSTDVNVNK 68
P+ E++ + + F +VA++LS+Q+ D+ +
Sbjct: 9 PENWREVYDEICKMKAKVVAPVDVQGCHTLGERNDPKKFRFQTLVALMLSSQTKDIVLGP 68
Query: 69 ATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
++L E + I L I +G + +K+ + ++ IL +F IP
Sbjct: 69 TMRNLKEKLAGGLCLEDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGDIPD 128
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+E L LPG+G K + +S+A+ VD H+ RI N + KT + +L
Sbjct: 129 TVEDLMTLPGVGPKMGYLCMSIAWNKTVGIGVDVHVHRICNLLHWCNTKTEEQTRAALQS 188
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN--LCKR-IKQ 227
+P + + ++ LV G+ +C R +C C +S+ LC K+
Sbjct: 189 WLPKELWFELNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAFKE 234
>gi|15894778|ref|NP_348127.1| A/G-specific DNA glycosylase [Clostridium acetobutylicum ATCC 824]
gi|15024446|gb|AAK79467.1|AE007660_10 A/G-specific DNA glycosylase [Clostridium acetobutylicum ATCC 824]
gi|325508916|gb|ADZ20552.1| A/G-specific DNA glycosylase [Clostridium acetobutylicum EA 2018]
Length = 215
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E+ + K + + + ++V+ +L Q+ V + +
Sbjct: 6 EEIYMFQCFLLDWYDKNKRNFPWRYTFDPYKVLVSEILLQQTNVDKVVEPYFRIINKYKN 65
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
++ + L+N + IG++ + + +++ ++N IP + L ++ GIG
Sbjct: 66 IHELAESEDVFLKNVFKGIGLFYRADR-LKNIAGNIVNYNKKVIPDKWDELIKIKGIGYY 124
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQSLLRIIPPKHQYNA 194
+ +L F P +DT++ RI RI + K+ + +IP +
Sbjct: 125 ICSALLCFGFNKPYAVLDTNVIRIFERIFDIKSEKKRPRDDIKLFEFAQLLIPEDRYVDY 184
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+Y ++ G +C P+C CI C+
Sbjct: 185 NYAILDFGACICTMYNPKCSQCIFRFNCE 213
>gi|260892299|ref|YP_003238396.1| DNA-(apurinic or apyrimidinic site) lyase [Ammonifex degensii KC4]
gi|260864440|gb|ACX51546.1| DNA-(apurinic or apyrimidinic site) lyase [Ammonifex degensii KC4]
Length = 240
Score = 87.7 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 43 LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT--PQKMLAIGEKKLQNYIRTIGI 100
L + F ++VA LLS STD + + L ++ P L E++L +R +G+
Sbjct: 37 LSTRDPFAVLVATLLSQHSTDRKALEVYRRLVQVVKNLSPASFLNCEEQELAEILRPVGL 96
Query: 101 YRKKSENIISLSHILINEF-----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+R+K++ + +L+ +++ + + + L RLPG+G K A+V+L + G P
Sbjct: 97 HRRKAKLLRTLAREVVDFDLKALSNLPTFEARQRLLRLPGVGPKTADVLL-LHLGHPLFP 155
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
VDTHI RI+ R+ A ++++ + + P+ AH L+ GR +C+ARKP+C +
Sbjct: 156 VDTHIARITWRLSWAKRPCYEEIQKVWMELFSPEDYQEAHLRLIQWGREICQARKPRCFT 215
Query: 216 CIISNLCKRIKQ 227
C + C K+
Sbjct: 216 CFLRICCSFAKE 227
>gi|168040033|ref|XP_001772500.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676190|gb|EDQ62676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 22/207 (10%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ----------------KML 84
E + + V+ ++ Q+ V + T
Sbjct: 226 TETEGERAYAVWVSEMMLQQTRVATVISYYQRWMRTWPTVYALAQATQEVSSSAFIPNSS 285
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
++ + +G YR ++ ++ + ++ EF + P+T E L ++PGIG A I
Sbjct: 286 VQSCLEVNSVWAGLGYYR-RARFLLEGAKKIVEEFGGEFPRTAEELQKVPGIGTYTAGAI 344
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAP-----GKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
S+AF VD ++ R+ R+ T +++ + + L+
Sbjct: 345 ASIAFKQVVPVVDGNVIRVLCRLRAISLNPKASTTVKLFWALASQLVEEYRPGDFNQALM 404
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
G +C P C C +S+ C +K
Sbjct: 405 ELGATICTPTSPSCALCSVSSQCAALK 431
>gi|260219873|emb|CBA26841.1| A/G-specific adenine glycosylase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 356
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 18/204 (8%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V T + A ++
Sbjct: 21 RNSLPWQNTQDPYRVWLSEIMLQQTQVATVIGYFDRFLVRCPTVADLAAARSDEVMGLWS 80
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++ P+ L LPGIGR A I S+ FG +
Sbjct: 81 GLGYYS-RARNLHRCAQLVMELHGGAFPRDAATLVTLPGIGRSTAAAIASLCFGERVAIM 139
Query: 157 DTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKH---------QYNAHYWLVLHG 202
D ++ R+ R+ LA + ++P + ++ G
Sbjct: 140 DANVKRVLTRVLGFDADLASATNERALWDRATALLPTEAEVATEGPRVMPRYTQGMMDLG 199
Query: 203 RYVCKARKPQCQSCIISNLCKRIK 226
+C +KP C C +++ C K
Sbjct: 200 ASLCSPKKPSCLLCPVNSQCAAAK 223
>gi|68535367|ref|YP_250072.1| putative A/G-specific DNA glycosylase [Corynebacterium jeikeium
K411]
gi|68262966|emb|CAI36454.1| putative A/G-specific DNA glycosylase [Corynebacterium jeikeium
K411]
Length = 351
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 53/248 (21%)
Query: 31 LFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + +L + + + ++++ ++S Q+ V + + TP +
Sbjct: 22 KLNYWYARNARDLPWRHPDTSPWAILLSEVMSQQTPVARVIPLWQAWLKRWPTPADLADA 81
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
++ +G R+ + + + ++P + L LPGIG A + +
Sbjct: 82 PRSEILKMWANLGYPRRALR-LKECAIACMERHGGEVPSNITELEALPGIGHYTARAVAA 140
Query: 147 MAFGIPTIGVDTHIFRISNR---IGLAPGKTPNKVEQSLLRIIPPKHQ------------ 191
AFG VDT++ R+ R G + + ++P
Sbjct: 141 FAFGQAVPVVDTNVRRVYRRLVDGRYLQGPARARDLADVASLLPHVDPDPRLVGRQLPPP 200
Query: 192 -----------------------------YNAH----YWLVLHGRYVCKARKPQCQSCII 218
+A L+ G +C A+ P C C +
Sbjct: 201 PQPQPTDAGTGSGAGSSAGASTDTTSGADRDAANLMCAALMELGALICTAKSPACDQCPV 260
Query: 219 SNLCKRIK 226
+ C ++
Sbjct: 261 IDDCAWVQ 268
>gi|298387599|ref|ZP_06997151.1| endonuclease III [Bacteroides sp. 1_1_14]
gi|298259806|gb|EFI02678.1| endonuclease III [Bacteroides sp. 1_1_14]
Length = 176
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/160 (40%), Positives = 104/160 (65%), Gaps = 2/160 (1%)
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
T L++ TP+ + A + + YIR++ K+++++ ++ +L+N+F++K+P +
Sbjct: 1 MITPPLYKDFPTPEALAASTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSKVPDNM 60
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRI 185
+ L +LPG+GRK ANVI S+ F + VDTH+FR+S+RIGL P P VE+ L++
Sbjct: 61 DDLIKLPGVGRKTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKN 120
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
IP K AH+WL+LHGRYVC+AR P+C +C + +CK
Sbjct: 121 IPEKLIPIAHHWLILHGRYVCQARTPKCDTCGLQMMCKYF 160
>gi|46137549|ref|XP_390466.1| hypothetical protein FG10290.1 [Gibberella zeae PH-1]
Length = 624
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 69/212 (32%), Gaps = 26/212 (12%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
+L + + ++ ++ Q+ V + T + A + + R +G
Sbjct: 164 RDLLERRAYEVWISEIMLQQTRVAVVIDYWNKWMDKWPTIHDLAAASADDVLSAWRGLGY 223
Query: 101 YRKKSENIISLSHILINEFDNK--IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
Y + + + ++ + T + ++PG+GR A I S+ FG VD
Sbjct: 224 YSRATRIHEAAKLVVNDSVMKGLLPSNTKDLEDKVPGVGRYTAGAISSIVFGRAAPMVDG 283
Query: 159 HIFRISNRI-----------------GLAPGKTPNKVEQSLLRIIPPK------HQYNAH 195
++ R+ +R A + + +
Sbjct: 284 NVLRVLSRQLGLFGNVKSNKTVIDTLWAAADALVQAIARDGTDKQEGEEVETSDRPGRWG 343
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G +C KP C C I++ C+ +
Sbjct: 344 QALMELGSTICIP-KPNCSECPITSTCRVYAE 374
>gi|58259341|ref|XP_567083.1| A/G-specific adenine DNA glycosylase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223220|gb|AAW41264.1| A/G-specific adenine DNA glycosylase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 568
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 20/195 (10%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + E T + K +R +G YR+
Sbjct: 128 AYEIWVSEVMLQQTQVTTVIAYWQRWMERWPTISDL-----AKADVEVRGLGYYRRARSL 182
Query: 108 IISLSHILINEFDNKIPQTLEGLTR--LPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ ++ N N + + G+GR A I SMA+G+ T VD +I R+
Sbjct: 183 LAGAKTVMGNSKYNGRLPDDPAVLEKEIDGVGRYTAGAICSMAYGVRTPIVDGNIHRLLT 242
Query: 166 RIGLAPGK--------TPNKVEQSLLRIIPPKHQ-----YNAHYWLVLHGRYVCKARKPQ 212
R+ +V L++ +P + + + L+ G VCK P+
Sbjct: 243 RLLAVHAPQTGPATIKFLWRVADELIKHLPSGDKHNNVVGDWNQALMELGSQVCKPANPE 302
Query: 213 CQSCIISNLCKRIKQ 227
C C + CK +
Sbjct: 303 CGVCPLKKACKGYAE 317
>gi|145596783|ref|YP_001161080.1| HhH-GPD family protein [Salinispora tropica CNB-440]
gi|145306120|gb|ABP56702.1| HhH-GPD family protein [Salinispora tropica CNB-440]
Length = 299
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + ++V+ ++ Q+ V + TP + A
Sbjct: 11 SRWYTQHARDLPWRRPEVGAWAILVSEVMLQQTPVARVVPSWTDWMARWPTPADLAAEPP 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ ++P LE L LPG+G A + + A
Sbjct: 71 AEAIRMWGRLGYPRRAVR-LREAAVAIVERHGGQVPNRLEQLLALPGVGTYTARAVAAFA 129
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL------RIIPPKHQYNAHYWLVLHG 202
+G VDT++ R+ R + L P A + G
Sbjct: 130 YGQRHPVVDTNVRRVICRAVAGKPDAGPTTRPADLVAAEELLPAEPAAAALASAAFMELG 189
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC AR P+C SC ++++C
Sbjct: 190 AVVCTARSPRCGSCPVASIC 209
>gi|311087437|gb|ADP67517.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 350
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 26 EEIFYLF-SLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ IF + + + +L + +T+ ++ ++ Q+T + K
Sbjct: 3 KYIFSQLVLNWYHKNGRKDLPWQINKTLYTVWISEIMLQQTTVKSAIPYFKKFILNFPNI 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G Y +++NI + I+ ++ P + +LPGIGR
Sbjct: 63 KSLNNSKLDDVLYLWSGLGYYN-RAKNIYKSAQIIKKKYKGIFPDQFSNIIQLPGIGRST 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRII----PPKHQYNAH 195
A ILS++ +D ++ RI G++ K+E+ L II P + +
Sbjct: 122 AGAILSLSLNFFYPILDGNVKRILVRYYGISGLLKDKKIEKKLWNIIESITPIHNTGKFN 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + KP+C C + C
Sbjct: 182 QGMMDIGASICISIKPKCTICPLKKEC 208
>gi|282866881|ref|ZP_06275915.1| HhH-GPD family protein [Streptomyces sp. ACTE]
gi|282558280|gb|EFB63848.1| HhH-GPD family protein [Streptomyces sp. ACTE]
Length = 300
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + ++V+ + Q+ V + P + A +
Sbjct: 21 WFEQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWMARWPRPADLAADAPGE 80
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P L LPGIG A + S A+G
Sbjct: 81 AVRAWGRLGYPRRALR-LHGAAQAITERHGGDVPSEHGQLLALPGIGEYTAAAVASFAYG 139
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQYNAHYWL--VLHGRY 204
+DT++ R+ R PN + ++P + A + + G
Sbjct: 140 QRHAVLDTNVRRVFARAASGIQYPPNATTAAERKLARALLPDEDARAARWAAATMELGAL 199
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ C C I+ C
Sbjct: 200 VCTAKNEDCGRCPIAEQC 217
>gi|15617145|ref|NP_240358.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11386923|sp|P57617|MUTY_BUCAI RecName: Full=A/G-specific adenine glycosylase
gi|25292153|pir||D84994 A/G-specific adenine glycosylase [imported] - Buchnera sp. (strain
APS)
gi|10039210|dbj|BAB13244.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|311087928|gb|ADP68007.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 350
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 26 EEIFYLF-SLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ IF + + + +L + +T+ ++ ++ Q+T + K
Sbjct: 3 KYIFSQLVLNWYHKNGRKDLPWQINKTLYTVWISEIMLQQTTVKSAIPYFKKFILNFPNI 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G Y +++NI + I+ ++ P + +LPGIGR
Sbjct: 63 KSLNDSKLDDVLYLWSGLGYYN-RAKNIYKSAQIIKKKYKGIFPDQFSNIIQLPGIGRST 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRII----PPKHQYNAH 195
A ILS++ +D ++ RI G++ K+E+ L II P + +
Sbjct: 122 AGAILSLSLNFFYPILDGNVKRILVRYYGISGLLKDKKIEKKLWNIIESITPIHNTGKFN 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + KP+C C + C
Sbjct: 182 QGMMDIGASICISIKPKCTICPLKKEC 208
>gi|311251810|ref|XP_003124777.1| PREDICTED: endonuclease III-like protein 1-like [Sus scrofa]
Length = 312
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRAHGLTVDSILQMDDSTLGTLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+ R+
Sbjct: 190 KQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIAGRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P K +L +P + + LV G+ C +P+CQ+C+ LC
Sbjct: 250 KWTKKATKSPEKTRTALEEWLPRELWSEINGLLVGFGQQTCLPVRPRCQACLNRALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|219848286|ref|YP_002462719.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
gi|219542545|gb|ACL24283.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
Length = 223
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 39 PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI 95
+ EL + + + +A +L ++ V + + T + + E +L+ +
Sbjct: 22 AETELPWRKYRTPYRIFLAEMLLVRTRTDIVANHFEKIASKYPTIEALALADESELREVL 81
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
R +G+ K+ +I + + + + +IP E L ++PGIG+ A IL A+G +
Sbjct: 82 RPLGL-SKRFPYLIKAARYICDNHNGEIPADFESLLKVPGIGKYTATAILIFAYGQKLVP 140
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP---PKHQYNAHYWLVLHGRYVCKARKPQ 212
D ++ R +R K + L ++P + + L+ R +C+ARKP+
Sbjct: 141 ADVNVLRFVSRFTGLEMGHVTKGSRELWNLLPLLSEANVGLSAENLLDFTRLICRARKPK 200
Query: 213 CQSCIISNLCKRIK 226
C +C +S C K
Sbjct: 201 CNACPLSAHCSYFK 214
>gi|290979248|ref|XP_002672346.1| predicted protein [Naegleria gruberi]
gi|284085922|gb|EFC39602.1| predicted protein [Naegleria gruberi]
Length = 616
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 69/290 (23%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVN------------------ 47
S + + + L++ E I+ + + K +L +
Sbjct: 18 SSPTKRVSCAKSFLFSHDERGHIWRNLINWYDNNKKDLPWRKTIKSADDEDDDVKATEEL 77
Query: 48 ---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ ++V+ ++ Q+ V + T + + +G YR+
Sbjct: 78 HQRAYEVLVSEIMLQQTQVETVKTYFLKWMKRFPTVKDLADATVDDAVGIWSGLGYYRRA 137
Query: 105 SENIISLSHILINEF----------------------DNKIPQTLEGLTRLPGIGRKGAN 142
+ +I+ K+P ++ L +LPG+GR A
Sbjct: 138 RYLYNAAKYIVEKINKPIKNEEIISDDEDDDEEKKRIIYKLPDNVKDLMQLPGVGRYTAG 197
Query: 143 VILSMAFGIPTIGVDTHIFRIS----------------NRIGLAPGKTPNKVEQSLLR-I 185
I S+AF VD ++FR+ N + + + + +
Sbjct: 198 AIASIAFSRTASVVDGNVFRVFARLKRIEEDIAVNKTANTVFWPMADNLIQHYRDIEDTV 257
Query: 186 IPPKHQ---------YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + + + ++ GR VC R P+C C ++ +C+ K
Sbjct: 258 LEKEDLELKHRYNVTGDFNQAVMELGRTVCIPRNPKCTECPLAEVCEANK 307
>gi|297826589|ref|XP_002881177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327016|gb|EFH57436.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 354
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ D N A L + + TP+ + E ++ I +G Y +K+
Sbjct: 149 FAVLLGALLSSQTKDQVNNAAIHRLHQNSLLTPEAVDKADESTIRELIYPVGFYTRKATY 208
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + +++ IP +L+ L LPGIG K A++IL + + I VDTH+ RI NR
Sbjct: 209 MKKIARICLVKYNGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 268
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + + LV G+ +C +P+C++C ++
Sbjct: 269 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQTICTPLRPRCEACSVT 328
Query: 220 NLCK-RIKQ 227
LC K+
Sbjct: 329 KLCPAAFKE 337
>gi|325179919|emb|CCA14321.1| predicted protein putative [Albugo laibachii Nc14]
Length = 528
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + V+ ++ Q+ V T ++ + E+++ + +G YR ++
Sbjct: 113 SPYETWVSEIMLQQTRVDTVIDYFTRWIGRFPTIAQLASASEEEVNSMWAGLGYYR-RAR 171
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + ++ ++D ++P ++E L +PGIGR A I S+AF VD ++ R+ R
Sbjct: 172 MLHAGAKYVMEKYDGELPSSVEALLTIPGIGRYTAGAIASIAFDKKEPLVDGNVIRVMAR 231
Query: 167 IGLAPGKTPNKV-----EQSLLRII-PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
+ NK + ++ N + L+ G +C + +C C + N
Sbjct: 232 LRAVGADPKNKKMIDLSWKLAKDLVQSCDSPGNLNQALMELGATICGVQVARCTGCPLKN 291
Query: 221 LCKRIKQ 227
C +
Sbjct: 292 ECLAYAR 298
>gi|305664312|ref|YP_003860600.1| HhH-GPD family protein [Ignisphaera aggregans DSM 17230]
gi|304378881|gb|ADM28720.1| HhH-GPD family protein [Ignisphaera aggregans DSM 17230]
Length = 239
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 32/243 (13%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYY---------VNHFTLI 52
+S KK+ C++ +++ IF + + + F ++
Sbjct: 1 MSMKKT----------CVWNREDIVNIFEQIKIYYRDSIKIDDFVALKLVAEGAEPFEVL 50
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYR---------- 102
V ++LS ++D N +A L + D I I I +
Sbjct: 51 VGIILSQNTSDRNAYRALLRLKNVLDDVITPDRILSIDPSVIINAINVAGLANRRLQSLL 110
Query: 103 KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ S +I + + + + L + GIG K A+V L M + PT +DTHI R
Sbjct: 111 ELSRHIKENPKFFNDLKNLSVDDARKALLSIYGIGYKTADVFLLMIYKKPTFPIDTHIMR 170
Query: 163 ISNRIGLAPGKT-PNKVEQSLLRIIP--PKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ R+G+ + + +L ++ P+ + H L+ HGR +CKAR P+C C I+
Sbjct: 171 VLKRLGIVHEDMGYEDIRKFILGVVEHNPEELLSLHISLIAHGRMICKARNPRCSECPIN 230
Query: 220 NLC 222
C
Sbjct: 231 TKC 233
>gi|73540054|ref|YP_294574.1| A/G-specific DNA-adenine glycosylase [Ralstonia eutropha JMP134]
gi|72117467|gb|AAZ59730.1| A/G-specific DNA-adenine glycosylase [Ralstonia eutropha JMP134]
Length = 393
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 75/201 (37%), Gaps = 19/201 (9%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V + T Q + A ++
Sbjct: 41 RHDLPWQNTRDAYRIWLSEIMLQQTQVSAVIDYFQRFITQLPTVQALAAAPADQVMALWA 100
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + +++E + P L LPGIGR A + + + G+ + +
Sbjct: 101 GLGYYS-RARNLHRCAMQVVSEHGGRFPPDPAVLATLPGIGRSTAAAVAAFSAGVRSPIL 159
Query: 157 DTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQY----------NAHYWLVLHGRYV 205
D ++ R+ R G +E + + L+ G V
Sbjct: 160 DGNVKRVFARFFGIHGHPGERAIENRMWELADAALPAPGPHQADDMVAYTQGLMDLGATV 219
Query: 206 CKARKPQC----QSCIISNLC 222
C KP C +C +S+ C
Sbjct: 220 CSRGKPACLSDAAACPLSSDC 240
>gi|310801669|gb|EFQ36562.1| A/G-specific adenine glycosylase [Glomerella graminicola M1.001]
Length = 665
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 39/220 (17%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V T + + A + + R +G Y + +
Sbjct: 167 RRAYEVWISEIMLQQTRVAVVIDYWNRWMARWPTIRDLAAAAPEDVLAAWRGLGYYSRAT 226
Query: 106 ENII--SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
L T E ++PG+GR A I ++ FG VD ++ R+
Sbjct: 227 RIHEAAKLVVADPGWAGLMPADTAELEAKVPGVGRYTAGAIAAIVFGRAAPMVDGNVLRV 286
Query: 164 SNRIGLAPGK----------------------TPNKVEQSLLRIIPPK------------ 189
+R G + E + RI
Sbjct: 287 LSRQLGVFGNAKTDKAVIDLLWAAADALAKAVARDDPEDARDRISDEDEEAPPPPPPPPT 346
Query: 190 --HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC KP C +C +++ C+ +
Sbjct: 347 SDRPGRWGQALMELGSTVCTP-KPNCGACPVTSTCRAYAE 385
>gi|119719059|ref|YP_919554.1| HhH-GPD family protein [Thermofilum pendens Hrk 5]
gi|119524179|gb|ABL77551.1| HhH-GPD family protein [Thermofilum pendens Hrk 5]
Length = 236
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 16/216 (7%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNH------FTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+EI + +GE ++ F ++VA ++S + + N KA L E
Sbjct: 15 DEILARLKGAFSLGRGEFVALDVARRGDFFGVLVATIISQNTNENNTLKAFASLEERVGV 74
Query: 80 PQ-KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI--------PQTLEGL 130
K+ G +L IR G+ +K++ I ++ +L ++ I + + L
Sbjct: 75 ECEKIRKAGLSELAEAIRPAGLQEQKAKAIKQVASLLYEKYGCDIGKLLSRGVEEVIREL 134
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
++ GIG K +V+L+ P + +DTH+ R+S R+GLA + +++SL +
Sbjct: 135 KQIEGIGDKTIDVLLANYGY-PVLPIDTHVRRVSVRLGLARPGSYRAMQKSLHGFFREEA 193
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ +AH +L+ GR +C+A+ P C C +S+LC +
Sbjct: 194 RLDAHLYLIKLGRTLCRAKNPLCDECPLSDLCCYYR 229
>gi|327310305|ref|YP_004337202.1| DNA-(apurinic or apyrimidinic site) lyase [Thermoproteus uzoniensis
768-20]
gi|326946784|gb|AEA11890.1| DNA-(apurinic or apyrimidinic site) lyase [Thermoproteus uzoniensis
768-20]
Length = 213
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTP 80
+ + E L ++ +P V+ F L+VAV+L+ +TD N +A +L TP
Sbjct: 2 ERVAEFVKLREDEFVAPVLRRAGVDVFELLVAVVLTQNTTDRNAFRAYYNLKNAVGRITP 61
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH-----ILINEFDNKIPQTLEGLTRLPG 135
Q +L++GE++L IR G++R ++ +I LS L D + + LT LPG
Sbjct: 62 QALLSLGEERLAELIRPAGMHRVRARKLIELSRSLSDVDLSRIADMDVEEARRFLTSLPG 121
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G K A+V+L+ G P VDTHI RI+ R G+ GK ++ + + +PP+ H
Sbjct: 122 VGEKTADVVLANL-GKPAFPVDTHITRIARRWGI--GKRYGEISRWFMERLPPERYLEVH 178
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L+ GR C+AR P+C C + +LC
Sbjct: 179 LKLIQFGRDYCRARSPRCGECPVRDLCPW 207
>gi|290558918|gb|EFD92306.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422568|gb|EGD71963.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
Length = 217
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
K ++ L K+P + F +++ ++S ++ D A K L IADT
Sbjct: 1 MDIKNFIKVTLLIERKYPVKIRKAE---PFEILIHGIMSTRTKDTTTFPAQKRLLSIADT 57
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
P+ + + KK+++ I +G Y+ K++ + + LI+ FD+K+P L ++PG+G K
Sbjct: 58 PKGISELPLKKIESLIYPVGFYKTKAKLLKKACNFLIDNFDSKVPSDKSELMKIPGVGPK 117
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
A+++L F +P I VDTH+ RI R+G G P+K E+ L + + +
Sbjct: 118 VASLVLEWGFNLPFIAVDTHVNRIVQRLGFVSIGTKPDKTEKILEHALKDNIKIKVNSSF 177
Query: 199 VLHGRYVCKARKPQCQSCIISNLC------KRIK 226
+ GR +CK P C C + N C K K
Sbjct: 178 IYFGRAICKPISPLCSECPVYNYCEFKLKSKYYK 211
>gi|321475198|gb|EFX86161.1| hypothetical protein DAPPUDRAFT_193197 [Daphnia pulex]
Length = 306
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V+++LS+Q+ D A + L + T + ++ EK + N I +G ++KK+ I
Sbjct: 121 FQVLVSLMLSSQTKDQLTYAAMEKLKKHGLTVENVINTDEKVIANLIHPVGFWKKKASYI 180
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ IL +++N IPQT+E L +LPG+G+K A + +++ + VDTH+ RI+NR+
Sbjct: 181 KRTAVILAAQYNNDIPQTVEELCKLPGVGQKMAVLTVNIGWKKTIGIGVDTHVHRIANRL 240
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P KTP ++ L +P + LV G+ C KPQC +C+ NLC
Sbjct: 241 GWTRRPTKTPENTQKELEDWLPRSLWDEVNILLVGFGQQRCTPIKPQCSTCLNKNLCPFG 300
Query: 226 K 226
K
Sbjct: 301 K 301
>gi|251771121|gb|EES51705.1| putative endonuclease III [Leptospirillum ferrodiazotrophum]
Length = 213
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 22 PKELEEIFYLFSLK-WPSP--KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
K L E+ L K P P + + ++++ +LS ++ D + A+ LF A
Sbjct: 2 EKNLREVETLLEKKGIPPPGIQTLGIVGDPLRVLLSTILSLRTRDPVMEAASLRLFSRAP 61
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + E++L+ I +G YR K++ I ++ I++ ++ +P + L LPG+G
Sbjct: 62 DLESIALMEEEELERIIYPVGFYRTKAKTIKQIAKIVLEKWKGSLPSEISPLLSLPGVGL 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K A ++L FG + VDTH+ RI+NR G K + L +I+P + + L
Sbjct: 122 KTATLVLGAGFGKSVLTVDTHVHRIANRWGAVKTKDADATYWELDKIVPNTLKLKVNPVL 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
V G+ +C P+C C +S C +I
Sbjct: 182 VSFGQTICLPLSPRCSECTLSQ-CPKI 207
>gi|303236061|ref|ZP_07322664.1| A/G-specific adenine glycosylase [Prevotella disiens FB035-09AN]
gi|302483934|gb|EFL46926.1| A/G-specific adenine glycosylase [Prevotella disiens FB035-09AN]
Length = 327
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 11/197 (5%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + N + + ++ ++ Q+ + + + + E +
Sbjct: 9 QWYAENGRDLPWRRTKNPYAIWLSEIIMQQTRIAQGTAYWERFMKRWPRVEDLAKATEDE 68
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G Y + + I+ P L +L GIG A I S+AFG
Sbjct: 69 VLREWQGLGYYSRARNLHKAAKQIVEIGHF---PLIYNELIKLSGIGEYTACAISSIAFG 125
Query: 151 IPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
VD +++R+ R + + + + + ++ G
Sbjct: 126 EEKAVVDGNVYRVLARYFGIDTPIDSTEGKKLFKAMAEEYLAKDAPAAYNQGIMDFGAMQ 185
Query: 206 CKARKPQCQSCIISNLC 222
C P C SC + C
Sbjct: 186 CTPTSPNCLSCPLVETC 202
>gi|18402669|ref|NP_565725.1| endonuclease-related [Arabidopsis thaliana]
gi|20198157|gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana]
gi|330253455|gb|AEC08549.1| endonuclease III [Arabidopsis thaliana]
Length = 379
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ D N A L + TP+ + E ++ I +G Y +K+
Sbjct: 174 FAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATY 233
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP +L+ L LPGIG K A++IL + + I VDTH+ RI NR
Sbjct: 234 MKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 293
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + + LV G+ +C +P+C++C +S
Sbjct: 294 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVS 353
Query: 220 NLCK-RIKQ 227
LC K+
Sbjct: 354 KLCPAAFKE 362
>gi|86609598|ref|YP_478360.1| base excision DNA repair protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558140|gb|ABD03097.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 212
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 13/210 (6%)
Query: 31 LFSLKWPSPKGELY----YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ P+ + + +V +LS +TD N ++A + L + + +LA
Sbjct: 2 RLEQCFGIPQRAPNGLSPHPDLLDELVGTILSQNTTDANSSRAFRALKAAFPSWEAVLAA 61
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRLPGIG 137
L IR+ G+ K+ I + + D L+ L L G+G
Sbjct: 62 DPADLAQVIRSGGLAHLKAARIQEILAAIQERQGSLSLDFLRDLDDAGALDFLLSLKGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A +L G VDTH+ R++NR+GL K P+ L IP Y+ H
Sbjct: 122 LKTATCVLLFGLGRDLCPVDTHVHRVANRLGLVRAKHPDDTFAQLSPQIPRGKAYSLHVN 181
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V G+ +CKAR P+C C + C +Q
Sbjct: 182 FVRLGKRICKARMPECGRCPLRPTCPSGRQ 211
>gi|55377811|ref|YP_135661.1| A/G-specific adenine glycosylase [Haloarcula marismortui ATCC
43049]
gi|55230536|gb|AAV45955.1| A/G-specific adenine glycosylase [Haloarcula marismortui ATCC
43049]
Length = 311
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 86/225 (38%), Gaps = 11/225 (4%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDV 64
S + P G P + + + + + + + ++V+ ++S Q+
Sbjct: 4 QSTATDRPEGV---PADPSAVQNALVEWYEADHRSYPWRETTDPYEILVSEVMSQQTQLD 60
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKI 123
V A + + T + + + + + Y +++ + + +++++D +
Sbjct: 61 RVVDAWEDFLDRWPTAAALAEADRSDVVGFWTSHSLGYNNRAKYLHEAAGQVVDDYDGEW 120
Query: 124 PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
P+ +GL+ L G+G AN + S AF VDT++ R+ R P + E +
Sbjct: 121 PRDPDGLSDLMGVGPYTANAVASFAFNNGNAVVDTNVKRVLYRAFDVPDDD-SAFETAAG 179
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ--SCIISNLCKRIK 226
++P + ++ G C + P C C C +
Sbjct: 180 TLMPAGQSRVWNNAIMELGGVAC-EKTPDCDGAQCPWREWCSAYE 223
>gi|15790507|ref|NP_280331.1| A/G specific adenine glycosylase, repair protein [Halobacterium sp.
NRC-1]
gi|169236243|ref|YP_001689443.1| A/G-specific adenine glycosylase [Halobacterium salinarum R1]
gi|10581009|gb|AAG19811.1| A/G specific adenine glycosylase, repair protein [Halobacterium sp.
NRC-1]
gi|167727309|emb|CAP14095.1| putative A/G-specific adenine glycosylase [Halobacterium salinarum
R1]
Length = 312
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 79/212 (37%), Gaps = 8/212 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P + + + + + + ++V+ ++S Q+ V A + +
Sbjct: 15 PADTTALQTALVDWYTDSHRSFPWRETTDPYEILVSEVMSQQTQLSRVIDAWRAFLDRWP 74
Query: 79 TPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T + A + + + Y ++ ++ + + ++D IP+T L+ L G+G
Sbjct: 75 TTAALAAADRSDVVGFWSAHSLGYNNRATHLHEAAQQVETDYDGAIPRTPAELSELMGVG 134
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ-SLLRIIPPKHQYNAHY 196
AN + S AF VDT++ R+ R + + ++P +
Sbjct: 135 PYTANAVASFAFNAGNAVVDTNVKRVLYRAFEGIRDDDDPDYRPLANELLPDGTSRVWNN 194
Query: 197 WLVLHGRYVCKARKPQCQ--SCIISNLCKRIK 226
++ G C+ + P+C C + C +
Sbjct: 195 AVMELGAVACQ-QTPRCDEAECPLREWCHAYQ 225
>gi|145330326|ref|NP_001077988.1| endonuclease-related [Arabidopsis thaliana]
gi|17380754|gb|AAL36207.1| putative endonuclease [Arabidopsis thaliana]
gi|20259623|gb|AAM14168.1| putative endonuclease [Arabidopsis thaliana]
gi|330253456|gb|AEC08550.1| endonuclease III [Arabidopsis thaliana]
Length = 377
Score = 86.5 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ D N A L + TP+ + E ++ I +G Y +K+
Sbjct: 172 FAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATY 231
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP +L+ L LPGIG K A++IL + + I VDTH+ RI NR
Sbjct: 232 MKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 291
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + + LV G+ +C +P+C++C +S
Sbjct: 292 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVS 351
Query: 220 NLCK-RIKQ 227
LC K+
Sbjct: 352 KLCPAAFKE 360
>gi|21537257|gb|AAM61598.1| putative endonuclease [Arabidopsis thaliana]
Length = 379
Score = 86.5 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ D N A L + TP+ + E ++ I +G Y +K+
Sbjct: 174 FAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATY 233
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP +L+ L LPGIG K A++IL + + I VDTH+ RI NR
Sbjct: 234 MKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 293
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + + LV G+ +C +P+C++C +S
Sbjct: 294 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMICTPLRPRCEACSVS 353
Query: 220 NLCK-RIKQ 227
LC K+
Sbjct: 354 KLCPAAFKE 362
>gi|83590403|ref|YP_430412.1| DNA-3-methyladenine glycosylase III [Moorella thermoacetica ATCC
39073]
gi|83573317|gb|ABC19869.1| DNA-3-methyladenine glycosylase III [Moorella thermoacetica ATCC
39073]
Length = 257
Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
T L EIF + P+ F +IV +L+ NV KA +L
Sbjct: 25 TTARLMEIFNRLYRYFG-PRHWWPAETPFEVIVGAILTQNVAWKNVEKAIANLKAAGLLS 83
Query: 81 QKMLAI-GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLT 131
+ +A ++L+ +IR G YR K++ + + + L ++ + +
Sbjct: 84 PEAMARATIEELEPHIRPTGYYRVKAKKLKAFMNYLQERYNGSLEAMFARPLEELRPEVL 143
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPK- 189
+ GIG + A+ IL A P + +D + R+ +R+G + + ++ + +P
Sbjct: 144 GVFGIGPETADAILCYAGNYPIMVMDAYTRRVFSRLGFFGARASYQDMQDFFMVHLPRDN 203
Query: 190 HQYNAHYWLVL-HGRYVCKARKPQCQSCIISNLCKRI 225
YN ++ L+ +C + P C SC ++ LC RI
Sbjct: 204 RLYNEYHALIDGLANRICLKKAPACLSCPLAGLCPRI 240
>gi|330889572|gb|EGH22233.1| endonuclease III [Pseudomonas syringae pv. mori str. 301020]
Length = 93
Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%)
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L+ AF + VDTHIFR+SNR G+APGK +VE+ L++ +P + +AH+WL
Sbjct: 1 KTANVVLNTAFRQVAMAVDTHIFRVSNRTGIAPGKNVVEVEKQLMKFVPKNYLLDAHHWL 60
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+LHGRYVC+ARKP+C SC I +LC ++
Sbjct: 61 ILHGRYVCQARKPRCGSCRIEDLCDYKEK 89
>gi|218442657|ref|YP_002380977.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
gi|218175015|gb|ACK73747.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
Length = 230
Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 15/210 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
K+L + +P + + +++A +L +++ V T
Sbjct: 22 RKKLRKWGERNFRDFPWRHT----RDPYAILIAEILLQRTSARTVAPVYLEFLRRYPTLM 77
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E +L + +R +G+ ++ N+ L+ I + ++P + E L +LPG+G+ A
Sbjct: 78 TLSQAREHELSDLMRPLGLRS-RAANLKRLAITAIALYGGELPDSEEELLKLPGVGKYTA 136
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP-------PKHQYNA 194
+ + A+G P +D ++ RI R G K+E+ + +
Sbjct: 137 RAVCANAYGHPLAVLDVNVARILRRF---FGFDGTKIERRDAFLWSVAQAVALKRETDRW 193
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ L+ G VC+A KP C+ C + C+
Sbjct: 194 NLTLIDFGAEVCRATKPNCRDCPLRGKCQF 223
>gi|194219367|ref|XP_001915373.1| PREDICTED: similar to Nth endonuclease III-like 1 (E. coli) [Equus
caballus]
Length = 312
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDSTLGMLIYPVGFWRNKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL +D IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + LV G+ C +P+CQ+C+ LC
Sbjct: 250 RWTKKTTKSPEETRTALEEWLPRELWREINGLLVGFGQQTCLPVRPRCQACLNRALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|50555097|ref|XP_504957.1| YALI0F03641p [Yarrowia lipolytica]
gi|49650827|emb|CAG77764.1| YALI0F03641p [Yarrowia lipolytica]
Length = 483
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ------KMLAIGEKKLQNYIRTIGIYR 102
F L+++++LS+Q+ D +A +L E + +L++ ++ I +G +
Sbjct: 270 FQLLISLMLSSQTKDEVTCQAVLNLREFLKSRDLLLSVDGILSMSVGEIDGCISKVGFHN 329
Query: 103 KKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIF 161
+K++ I + +L+ +F IP T+ +T LPG+G K A++++ A+G+ VD H+
Sbjct: 330 RKADYISRATALLVKDFGGDIPPTIAAMTSLPGVGPKMAHLLMHRAWGVNEGIGVDVHVH 389
Query: 162 RISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII-SN 220
R++N G GKTP + L + +P + + + LV G+ VC ++ +C CI+
Sbjct: 390 RLANMWGWVKGKTPEESRVQLEKWLPQELWVDINPTLVGFGQTVCPSKGKKCGVCIVDKG 449
Query: 221 LCKR 224
LCK
Sbjct: 450 LCKA 453
>gi|317132107|ref|YP_004091421.1| HhH-GPD family protein [Ethanoligenens harbinense YUAN-3]
gi|315470086|gb|ADU26690.1| HhH-GPD family protein [Ethanoligenens harbinense YUAN-3]
Length = 213
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 12/209 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EL ++ L + P+ + + ++V +L+ + NV KA + TP +
Sbjct: 2 ELHTLYRLLFRHYG-PQHWWPAESPYEMMVGAILTQNTAWANVKKAIANF-GEKLTPAFV 59
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPGI 136
I + +L+ IR G +R+K+ + +L+ + L L G+
Sbjct: 60 TEISDGELEEIIRPSGFFRQKAARLKTLTGWYARYRYDIETARAQGTDTLRMELLALKGV 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNA 194
GR+ A+ IL A P +D + R+ R+G A + +P
Sbjct: 120 GRETADSILLYALQKPVFVIDAYTRRVFARLGFAVPSEYEVFRRFFEENLPRDPALYNEY 179
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCK 223
H +V H VC+ ++P C C + C
Sbjct: 180 HALIVRHAATVCR-KRPDCADCPFAPSCP 207
>gi|187736454|ref|YP_001878566.1| HhH-GPD family protein [Akkermansia muciniphila ATCC BAA-835]
gi|187426506|gb|ACD05785.1| HhH-GPD family protein [Akkermansia muciniphila ATCC BAA-835]
Length = 341
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 9/208 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + + + + + ++V+ L+ Q+T V TP
Sbjct: 10 IHAFRNALVEWFRREGRDYPWRRTTDPWHILVSELMLQQTTIPTVLGRYDRWMRQFPTPA 69
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A+ E+ +G YR + ++ +++ ++NEF + P EGL RLPGIG +
Sbjct: 70 HLAAVDEQTALRSWEGLGYYR-RVRSLQAIAREIVNEFGGRFPDNAEGLKRLPGIGPYTS 128
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLR----IIPPKHQYNAHY 196
+LS AF VD ++ R+ RI + + ++ L ++ P+H +
Sbjct: 129 GALLSFAFNKAAPIVDANVARVLARIDNYSVPVDSTEGQKYLWSRAESLVDPEHAREFNS 188
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ G+ C P C C + C
Sbjct: 189 AIMELGQTCCSISSPDCLLCPVRPFCSA 216
>gi|322711833|gb|EFZ03406.1| A/G-specific adenine glycosylase [Metarhizium anisopliae ARSEF 23]
Length = 473
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 77/244 (31%), Gaps = 36/244 (14%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
+ + P T + ++ L + + + ++ ++ Q+ V
Sbjct: 2 TRAMPWRKPWINPSTEPDASQLRKLLERR------------AYEVWISEIMLQQTRVAVV 49
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ T Q + A + + R +G Y + + + ++ + + +
Sbjct: 50 IDYWNRWMDKWPTIQDLAAADPEDVLAAWRGLGYYSRATRIHEASKLVVGDPAMQGLLPS 109
Query: 127 LEGLT--RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSL 182
++PG+GR A I ++ FG VD ++ R+ +R G KV ++
Sbjct: 110 ATNDLEAKVPGVGRYTAGAISAIVFGRAAPMVDGNVLRVLSRQLGIYGNIKTDKKVIDAI 169
Query: 183 LRIIPP-------------------KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
L+ G VC KP C C ++ C+
Sbjct: 170 WAAADALVQTVALDRPDHEDESEVSDRPGRWGQALMELGSTVCTP-KPNCSQCPVTASCR 228
Query: 224 RIKQ 227
+
Sbjct: 229 VYNE 232
>gi|95928500|ref|ZP_01311247.1| HhH-GPD [Desulfuromonas acetoxidans DSM 684]
gi|95135290|gb|EAT16942.1| HhH-GPD [Desulfuromonas acetoxidans DSM 684]
Length = 220
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLA 85
+F L ++ S + + F ++V +L+ + NV + L E TP +
Sbjct: 8 RVFELLLERFGS-QSWWPADDTFEMMVGAVLTQNTAWRNVELSIAALKEAQVMTPLALHR 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI--------PQTLEGLTRLPGIG 137
+ ++LQ IR+ G +++KS+ + +L+ ++ ++ ++ + L PGIG
Sbjct: 67 LEHQELQVLIRSSGFFQRKSQCLKNLAAVICRDYQGRVDSFLGGDLHAVRQRLLDQPGIG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQ--YNA 194
+ A+ ++ G+P VD + RI +R+GL K + V++ ++ +P
Sbjct: 127 PETADCMVLYGAGLPIFVVDAYTRRIFSRLGLLDAKARYDMVQRYAMQHLPADTSLFNEF 186
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H LV G+ C++R P+C++C ++ C+
Sbjct: 187 HALLVELGKVCCRSRNPRCEACPLNQHCRS 216
>gi|150864007|ref|XP_001382677.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
gi|149385263|gb|ABN64648.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
Length = 382
Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 36 WPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFE--------IADTPQKM 83
P+ + N F L+++++LS+Q+ D A K + E + +
Sbjct: 148 NPNVRT----RNPRIYRFQLLISLMLSSQTKDEVNYLAMKTMHEGLLANGYKDGLCIEAL 203
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
L + EK+L +YI +G + +K+ I +L + F + IP T+E + LPG+G K +
Sbjct: 204 LELTEKELDDYICKVGFHNRKAGYIKRACEMLRDNFQSDIPSTIEDVVTLPGVGPKMGYL 263
Query: 144 ILSMAFGIPTIG-VDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+L A+GI + VD H+ R++ KTP L +PPK+ + + LV
Sbjct: 264 LLQNAWGINSGIGVDVHLHRLAQMWSWTSKNAKTPEHTRVELEDWLPPKYWADINPLLVG 323
Query: 201 HGRYVCKARKPQCQSCIISN--LCKRIKQ 227
G+ +C R P C C ++ LCK K+
Sbjct: 324 FGQTICVPRAPNCDICTLATTGLCKASKK 352
>gi|269925878|ref|YP_003322501.1| HhH-GPD family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789538|gb|ACZ41679.1| HhH-GPD family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 236
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L ++++ I + + + +P+ + ++ + ++ +LS ++D N A L++ +
Sbjct: 9 LPPKEKVKIIDDILTRTYGNPE-WVSRLDPVSELILTILSQHTSDKNSGAAFDRLYDHFN 67
Query: 79 -TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE---------FDNKIPQTLE 128
++++ +++ I++ G+ K+ I S+ + + D I E
Sbjct: 68 GDWKRVMEAPTEEVAQLIKSAGLSNIKAPRIQSVLKEIWSRLGSFDLQFLKDMPINAAKE 127
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIP 187
LT + G+G K A +L + G+P + VDTH+ R+S R+GL P K ++ L +I+
Sbjct: 128 WLTSINGVGPKTAACVLMFSLGLPVMPVDTHVHRVSLRLGLIPPKTNADRAHDILAQIVS 187
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ Y H L+ HGR VCKA P+C C ++ LC Q
Sbjct: 188 PERAYPFHINLIRHGRRVCKAPVPKCTICPLTCLCVYFHQ 227
>gi|294102031|ref|YP_003553889.1| DNA-(apurinic or apyrimidinic site) lyase [Aminobacterium
colombiense DSM 12261]
gi|293617011|gb|ADE57165.1| DNA-(apurinic or apyrimidinic site) lyase [Aminobacterium
colombiense DSM 12261]
Length = 233
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 25 LEEIFYLFSLKW--PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ ++ L W +L + ++ LLS + D N ++A + L ++ T ++
Sbjct: 15 VAKVLDRLELCWNMEKNPPDLRHEEPLDGLILTLLSQNTNDRNRDRAYESLRQLYPTWEE 74
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK---------IPQTLEGLTRL 133
+ ++++ IR G+ KS+ I + + + F + Q L +L
Sbjct: 75 VAQADTERIKEAIRVAGLSDIKSKRIKEILVAVQDAFGSYSIKELRKRGREQARAFLFKL 134
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQY 192
PG+G K +L G P VDTHI R S RIG A + P ++E L +++P +
Sbjct: 135 PGVGAKTVACVLLFDLGYPAFPVDTHIHRFSKRIGWAHDRCKPEEIEGMLEQVVPEERYL 194
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H ++ HGR +C AR+P+C C +++LC
Sbjct: 195 GGHINIITHGRNICLARQPRCDKCSVNDLC 224
>gi|28379327|ref|NP_786219.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
WCFS1]
gi|28272166|emb|CAD65072.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
WCFS1]
Length = 216
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + L F +++V+LSAQ+TDV+VNK T LFE
Sbjct: 1 MLKDDQIVWAIHQMEADIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPVLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ ++A ++ I+++G++ K+ NII + I+ E + +P +G+ LPG GR
Sbjct: 61 EPRDLMAADVADVEAIIKSVGLFHNKARNIIKTARIVHEELADVVPTDRKGIMALPGAGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS F PT VDTH+ IS R+ A TP +VEQ +L ++ P + AH+
Sbjct: 121 KTANVVLSDVFEQPTFAVDTHVSAISKRLHFVAQTATPLQVEQKILSVLAPAELHQAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +GR P + C + C ++ +
Sbjct: 181 MIEYGRKYSMKLTPDKEVCQLIIDCDKLNE 210
>gi|255587056|ref|XP_002534117.1| endonuclease III, putative [Ricinus communis]
gi|223525829|gb|EEF28268.1| endonuclease III, putative [Ricinus communis]
Length = 357
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+ L+S+Q+ D + A + L + + T + E +++ I +G Y +K+ N
Sbjct: 152 FAVLVSSLMSSQTKDHVTHGAVQRLHQNSLLTADAIDKADETTIKDLIYPVGFYTRKASN 211
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP++LE L LPGIG K A++++++ + I VDTH+ RI NR
Sbjct: 212 LKKIAKICLMKYDGDIPRSLEDLLSLPGIGPKMAHLVMNVAWDDVQGICVDTHVHRICNR 271
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G P + +L +P + + LV G+ +C +P+C C I+
Sbjct: 272 LGWVSRPGTEQKTSNPEETRVALQLWLPKEEWVPINPLLVGFGQTICTPLRPRCGMCSIT 331
Query: 220 NLCKR-IKQ 227
C K+
Sbjct: 332 EFCPSAFKE 340
>gi|297843388|ref|XP_002889575.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
gi|297335417|gb|EFH65834.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ + A + L + TP+ + E ++ I +G Y +K+ N
Sbjct: 179 FYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATN 238
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP+TLE L LPG+G K A+++L + + I VDTH+ RI NR
Sbjct: 239 VKKVAKICLMKYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNR 298
Query: 167 IGLAPGK-------TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + ++ LV G+ +C +P+C +C I+
Sbjct: 299 LGWVSKPGTKQKTLSPEETRVALQQWLPKEEWVAINFLLVGFGQTICTPLRPRCGTCSIT 358
Query: 220 NLCKR-IKQ 227
LC K+
Sbjct: 359 ELCPSAFKE 367
>gi|147919339|ref|YP_686925.1| putative DNA glycosylase [uncultured methanogenic archaeon RC-I]
gi|110622321|emb|CAJ37599.1| putative DNA glycosylase [uncultured methanogenic archaeon RC-I]
Length = 212
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 8/207 (3%)
Query: 27 EIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
EI + N + +++A + ++ V + ++
Sbjct: 3 EIIKNLLNWHKKNYRPYPWRNVSSPYMVMIAEFMLQRTRADQVVPVYNQFLKKYPDVDQL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ ++ ++ +G+Y ++ + + + F IP E L +PG+G A
Sbjct: 63 AEADIEDIKATLKPLGLY-WRANHFKMAAEYIQRTFSGNIPDNKEDLKNIPGVGDYAAGA 121
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIG----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
IL++AF + VD++I R+ NR + ++ + ++ K + ++
Sbjct: 122 ILAVAFRKKSCIVDSNIARVLNRYYGLGLNGEIRRKKEIVELACQLFNHKEPNKILFAII 181
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIK 226
VC P+ C + N C K
Sbjct: 182 DFSAIVCTPVNPKHGICPLKNNCLYYK 208
>gi|83999827|emb|CAH60127.1| putative adenine glycosylase [Streptomyces tenjimariensis]
Length = 314
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 11/232 (4%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVL 56
M +++ + + E + + + +L + + ++V+
Sbjct: 1 MTATETPSAPDSPVSPEPAVPGADGERLHSPVLAWFEAHARDLPWRRPEAGAWGVMVSEF 60
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + P + A + +G R+ + + +
Sbjct: 61 MLQQTPVSRVRPVYEQWLARWPRPAALAAEAPGEAVRAWGRLGYPRRALR-LHGAAVAIT 119
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+P+ L LPGIG A + S A+G +DT++ R+ R PN
Sbjct: 120 ERHGGDVPKEHAQLLALPGIGEYTAAAVASFAYGQRHAVLDTNVRRVFARAVTGVQYPPN 179
Query: 177 KV----EQSLLRIIPPKHQYNAHYWL--VLHGRYVCKARKPQCQSCIISNLC 222
+ ++P A + + G VC AR +C C I+ C
Sbjct: 180 ATTAAERRLARALLPEDEATAARWAAASMELGALVCTARNEECGRCPIAREC 231
>gi|297697807|ref|XP_002826033.1| PREDICTED: endonuclease III-like protein 1-like [Pongo abelii]
Length = 312
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C +P+CQ+C+ LC
Sbjct: 250 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVRPRCQACLNQALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|156065713|ref|XP_001598778.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980]
gi|154691726|gb|EDN91464.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 437
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP----------QKMLAIGEKKLQNYIRTI 98
+ + A++LS+Q+ D A L+ +LA+ K L I +
Sbjct: 163 YHTLTALMLSSQTKDTTNAVAMNRLYTELPAYKEGAPIGLTLDNILAVDPKLLNELIWVV 222
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VD 157
G + K++ I + + IL ++++ IP T+EGL LPG+G K A + +S A+G VD
Sbjct: 223 GFHNNKTKYIKAAAEILKDQWNGDIPDTIEGLMSLPGVGPKMAYLCMSSAWGRTEGIGVD 282
Query: 158 THIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
H+ RI+N G K P + +L +P + + ++ LV G+ +C +C SC
Sbjct: 283 VHVHRITNMWGWHTTKGPEETRLALQAWLPKELWHEINWLLVGFGQTICLPVGKKCGSCE 342
Query: 218 I--SNLCKR 224
+ + LCK
Sbjct: 343 LGMNGLCKA 351
>gi|332285642|ref|YP_004417553.1| A/G-specific adenine glycosylase [Pusillimonas sp. T7-7]
gi|330429595|gb|AEC20929.1| A/G-specific adenine glycosylase [Pusillimonas sp. T7-7]
Length = 359
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + Q + + ++ Y +G Y ++
Sbjct: 33 QDPYRIWLSEIMLQQTQVATVIGYYQRFLARFPDIQTLAHASQDEVMPYWAGLGYYA-RA 91
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++ ++ + P + + LPGIGR A I + + + +D ++ R+
Sbjct: 92 RNLHRCAQVICQDWGGQFPLNSQDIATLPGIGRSTAAAIAAFSVQERSPIMDGNVKRVFT 151
Query: 166 RIG---------LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
R E L P L+ G C +P C+ C
Sbjct: 152 RYFGIEGITSERATEQVLWRTAEAVLDAAPPGLDMTAYTQGLMDLGSQCCTRSRPGCEVC 211
Query: 217 IISNLC 222
+ C
Sbjct: 212 PLLQHC 217
>gi|291459948|ref|ZP_06599338.1| A/G-specific adenine glycosylase [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417289|gb|EFE91008.1| A/G-specific adenine glycosylase [Oribacterium sp. oral taxon 078
str. F0262]
Length = 405
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 85/228 (37%), Gaps = 33/228 (14%)
Query: 31 LFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
L + +L + + + + ++ ++ Q+ V + + A
Sbjct: 45 LLLRWFSLHGRDLPWREEPSPYHVWLSEVMLQQTRVEAVKGYYRRFLSSLPDIPALAAAE 104
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
E+ + +G Y ++ N+ + +L++++ K+P++ E L R+PGIG A I S+
Sbjct: 105 EELVLKLWEGLGYYS-RARNLQKGARLLVSQYGGKLPESAEELRRIPGIGDYTAAAIASI 163
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI-----IPP-------------- 188
AF VD ++ RI +R+ + + R+ IP
Sbjct: 164 AFKERIPAVDGNLLRIFSRLTACGSSMKSSAAKERARLYFLERIPDPPAKKLVSEARARY 223
Query: 189 ---------KHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
N + L+ G VC P+C C ++ LC +
Sbjct: 224 GFLHDSRDFSDPGNFNQALMDLGSSVCLPNGTPRCALCPLNRLCAAHR 271
>gi|213408176|ref|XP_002174859.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
gi|212002906|gb|EEB08566.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
Length = 361
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADT---PQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+VA++LS+Q+ D + K+L E + + AI EK+L I +G + +K+
Sbjct: 94 QTLVALMLSSQTKDTVLGPTMKNLKENMPKGLTVEGLEAIDEKELNILIEKVGFHNRKAM 153
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISN 165
+ + IL ++D IP T+EGL LPG+G K + L +A+ VD H+ RISN
Sbjct: 154 YLKKTAKILKEKYDGDIPDTIEGLMELPGVGPKMGYLCLGVAWNKIDGIGVDVHVHRISN 213
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--SNLCK 223
+G KT + +L +P + + ++ LV G+ +C R +C C + +NLC
Sbjct: 214 LLGWVHTKTEEQTRLALQSWLPKELWLDVNHMLVGFGQMICLPRGRRCDICTLAENNLCP 273
Query: 224 R 224
Sbjct: 274 S 274
>gi|328466020|gb|EGF37197.1| endonuclease III [Lactobacillus helveticus MTCC 5463]
Length = 192
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
L + E + +P+ KGEL++ N F L+ AV++SAQ+TD VN+ +
Sbjct: 5 LLSDDEARTVLKRILAMYPNAKGELHWDNTFHLLCAVMMSAQTTDKMVNRVMPDFIKKFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP+ + +++++ I+TIG+YR K++++ + + IL+ ++D+KIP+ + L PG+G
Sbjct: 65 TPEVLANASIEEIESTIKTIGLYRSKAKHLKATAKILVEKYDSKIPEDKKTLMTFPGVGE 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYN 193
K ANV+L+ +G+P I VDTHI RIS + K P++VEQ L I+P
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHISRISKAFHIVNQKAAPHEVEQRLESILPKNEWNK 180
>gi|300120326|emb|CBK19880.2| unnamed protein product [Blastocystis hominis]
Length = 198
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+LS+Q+ D + L E TP+ + ++KL I +G + KK + I + IL
Sbjct: 1 MLSSQTKDQTTHATMLKLREYGLTPKHIQETSDEKLGELICKVGFWTKKVKYIKKTTDIL 60
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKT 174
+ ++D IP T+E L +LPG+G K + L +A+ VD H+ RISNR+ T
Sbjct: 61 LEKYDGDIPDTIEELVKLPGVGPKMGYLALKVAWNKIDGIGVDVHVHRISNRLEWVHTNT 120
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P + +L +P ++ + + LV G+ +CK P+C C + N+C K
Sbjct: 121 PEQTRVALEAWLPKQYWFEINLLLVGFGQQICKG-SPKCSECKLRNMCPSSK 171
>gi|219682452|ref|YP_002468836.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622185|gb|ACL30341.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086273|gb|ADP66355.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086848|gb|ADP66929.1| A/G-specific adenine glycosylase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 350
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 11/207 (5%)
Query: 26 EEIFYLF-SLKW-PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ IF + + + +L + +T+ ++ ++ Q+T + K
Sbjct: 3 KYIFSQLVLNWYHKNGRKDLPWQINKTLYTVWISEIMLQQTTVKSAIPYFKKFILNFPNI 62
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G Y +++NI + I+ ++ P + +LPGIGR
Sbjct: 63 KSLNDSKLDDVLYLWSGLGYYN-RAKNIYKSAQIIKKKYKGIFPDQFSNIIQLPGIGRST 121
Query: 141 ANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRII----PPKHQYNAH 195
A ILS++ +D ++ RI G++ K+E+ L II P + +
Sbjct: 122 AGAILSLSLNFFYPILDGNVKRILVRYYGISGLLKDKKIEKKLWNIIESITPIYNTGKFN 181
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
++ G +C + KP+C C + C
Sbjct: 182 QGMMDIGASICISIKPKCTICPLKKEC 208
>gi|302679652|ref|XP_003029508.1| hypothetical protein SCHCODRAFT_78397 [Schizophyllum commune H4-8]
gi|300103198|gb|EFI94605.1| hypothetical protein SCHCODRAFT_78397 [Schizophyllum commune H4-8]
Length = 225
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKML---AIGEKKLQNYIRTIGIYRKKSENI 108
+V+++LS+Q+ D + A K L + ++ ++ I +G + KK+ I
Sbjct: 32 LVSLMLSSQTKDEVTDAAIKKLRAALGGSITLEALLKADKETIEGAINKVGFWPKKTGYI 91
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+ + L ++FD +P+T + L L G+G K A + L A+GI VD H+ RI+NR+
Sbjct: 92 MEAAKTLRDDFDGDVPKTAKELQSLKGVGPKMAYLCLQAAWGINDGIGVDVHVHRITNRL 151
Query: 168 GLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN--LCK 223
TP +L +P + + ++ LV G+ +C P+C C + + LC
Sbjct: 152 KWHNPPTNTPEATRANLESWLPKELWGDINHMLVGFGQEICYPVNPRCDQCTLRDMGLCP 211
Query: 224 RIKQ 227
+Q
Sbjct: 212 SAQQ 215
>gi|255727965|ref|XP_002548908.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
gi|240133224|gb|EER32780.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
Length = 331
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 46 VNH----FTLIVAVLLSAQSTDVNVNKATKHLF-------EIADTPQKMLAIGEKKLQNY 94
N F L+++++LS+Q+ D +A K L + + + ++ +Y
Sbjct: 103 RNPRIYRFQLLISLMLSSQTKDEVNYEAMKSLHEGLLKSHPEGLCIESLSKLSAAEIDSY 162
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I +G + +KS+ I IL+++ +P+T+ + +LPG+G K + L +GI
Sbjct: 163 INKVGFHNRKSQYIKKTCDILLSQHGGDVPKTISEIVKLPGLGPKMGYLFLQNGWGINDG 222
Query: 155 G-VDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKP 211
VD H+ R++ G TP K L + +P ++ + LV G+ VC R P
Sbjct: 223 IGVDVHLHRLAQMWGWVSPKANTPEKARIELEKWLPKEYWGQINPLLVGFGQVVCVPRSP 282
Query: 212 QCQSCII--SNLCKRIKQ 227
C C + +CK +
Sbjct: 283 NCDVCTLGRKGICKSANK 300
>gi|328949746|ref|YP_004367081.1| A/G-specific adenine glycosylase [Marinithermus hydrothermalis DSM
14884]
gi|328450070|gb|AEB10971.1| A/G-specific adenine glycosylase [Marinithermus hydrothermalis DSM
14884]
Length = 326
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 8/188 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+EL + + + L + + + ++++ +L Q+ E T
Sbjct: 3 RELRPFQDAVLAWYRAHRRALPWRGETDPYRILLSEVLLQQTRVEQAIPYYHRFLEAFPT 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
Q + E+ + G Y + L + +P+T L LPG+G
Sbjct: 63 LQALAEAPEEAVLKAWEGAGYYARA-----RNLKRLAEATPHGLPRTYRELLALPGVGPY 117
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
A + S+AFG P VD ++ R+ R+ P P + ++ ++ + + L+
Sbjct: 118 TAAAVASIAFGEPVAAVDGNVRRVLARLFAVPEPRPAWLRETAQALLAREAAGEWNQALM 177
Query: 200 LHGRYVCK 207
G VC
Sbjct: 178 ELGATVCT 185
>gi|296242399|ref|YP_003649886.1| HhH-GPD family protein [Thermosphaera aggregans DSM 11486]
gi|296094983|gb|ADG90934.1| HhH-GPD family protein [Thermosphaera aggregans DSM 11486]
Length = 230
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 28 IFYLFSLKW--PSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTP 80
I + + + Y + F IVAV+LS ++D N KA ++L + P
Sbjct: 7 ILEKLEKFYNLDEEEFTVSYVSKTSLFEFIVAVVLSQNTSDKNAVKALENLRKRFGVINP 66
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD----------NKIPQTLEGL 130
+ +L +G ++L + I+ GI+R++S ++ L+ I N + + + L
Sbjct: 67 ESVLNVGIEELADLIKPAGIHRERSRILLELAKIFCENMFEEKLIREVEKNDVEASRKIL 126
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
RLPG+G K A+V+L + FG P VDTHI RI+ R+G ++ +
Sbjct: 127 MRLPGVGPKTADVVLLVFFGKPVFPVDTHIRRITKRLGYVKKDNYYEISNFWASNTSQTN 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H L+ HGR C+A KP C++C I+ C+ ++
Sbjct: 187 YMSLHLLLIAHGRRTCRALKPFCETCPINGFCEHGRR 223
>gi|254557463|ref|YP_003063880.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
JDM1]
gi|254046390|gb|ACT63183.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
JDM1]
Length = 216
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + L F +++V+LSAQ+TDV+VNK T LFE
Sbjct: 1 MLKDDQIVWAIHQMEADIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPVLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ ++A ++ I+++G++ K+ NII + I+ + + +P +G+ LPG GR
Sbjct: 61 EPKDLMAADVADVEAIIKSVGLFHNKARNIIKTARIVHEKLADVVPTDRKGIMALPGAGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS F PT VDTH+ IS R+ A TP +VEQ ++ ++ P + AH+
Sbjct: 121 KTANVVLSDVFEQPTFAVDTHVSAISKRLHFVAQTATPLQVEQKIVSVLAPAELHQAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +GR P + C + C ++ +
Sbjct: 181 MIEYGRKYSMKLTPDKEVCQLIIDCDKLNE 210
>gi|124027163|ref|YP_001012483.1| EndoIII-related endonuclease [Hyperthermus butylicus DSM 5456]
gi|123977857|gb|ABM80138.1| predicted EndoIII-related endonuclease [Hyperthermus butylicus DSM
5456]
Length = 242
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKK 104
+ F ++ ++LS ++D N +A L E+ + + + L IR G+ R+K
Sbjct: 42 EHPFAVLAGIILSQNTSDRNSIRAYLQLREMVGVSPEAVLSAPEDRLIEAIRPAGLARQK 101
Query: 105 SENIISLSHILINEF------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
+ + + ++ + + E L +PG+G+K A+V L + P VDT
Sbjct: 102 ARALREAARRILEAGGEKVLLEMPWRELREFLLSIPGVGKKTADVFLQLVRKAPVFAVDT 161
Query: 159 HIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
H RI+ R GL K ++ ++LL P+ NAH L+ GR C+AR P+C C
Sbjct: 162 HAARIAKRWGLVGEKAGYDETSRALLEFFGPERSENAHRLLIALGRTYCRARNPRCDVCP 221
Query: 218 ISNLCKR 224
+ ++C
Sbjct: 222 LRDICPY 228
>gi|38197140|gb|AAH00391.2| NTHL1 protein [Homo sapiens]
Length = 305
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 123 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 182
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 183 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 242
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C P+C +C+ LC
Sbjct: 243 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 302
Query: 226 K 226
+
Sbjct: 303 Q 303
>gi|260654690|ref|ZP_05860180.1| A/G-specific adenine glycosylase [Jonquetella anthropi E3_33 E1]
gi|260630706|gb|EEX48900.1| A/G-specific adenine glycosylase [Jonquetella anthropi E3_33 E1]
Length = 354
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 80/206 (38%), Gaps = 10/206 (4%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + V+ + Q+ V + +
Sbjct: 14 RALAEWYRENGRHLPWRLTAGPYAVWVSETMLQQTQVSRVVPLYLAWLSAFPNCRSLAEA 73
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILS 146
E + + R +G Y ++ N+++ + ++++ + P L +LPG G A + +
Sbjct: 74 DESAVLSLWRGLGYYS-RARNMLASARLIVSAGYDGPPNDQTFLAKLPGFGPYTAAAVRA 132
Query: 147 MAFGIPTIGVDTHIFRISNRIGL-----APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+A+ PT +D ++ R+S+R+ A + ++++ ++ + L+
Sbjct: 133 LAYDEPTAALDGNLRRVSSRLTDLDKDPALSEGNKVCQRAVESLMKFQSPRLLTNALMDL 192
Query: 202 GRYVCKARKPQCQSCIISNLCKRIKQ 227
G C R P+C C + C K+
Sbjct: 193 GSGPCAPR-PRCLLCPLEPYCLARKR 217
>gi|300768699|ref|ZP_07078595.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308181528|ref|YP_003925656.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|300493656|gb|EFK28828.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308047019|gb|ADN99562.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 216
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ + L F +++V+LSAQ+TDV+VNK T LFE
Sbjct: 1 MLKDDQIVWAIHQMEADIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPVLFEKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
P+ ++A ++ I+++G++ K+ NII + I+ E + +P +G+ LPG GR
Sbjct: 61 EPKDLMAADVADVEAIIKSVGLFHNKARNIIKTARIVHEELADVVPTDRKGIMALPGAGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K ANV+LS F PT VDTH+ IS R+ A TP +VEQ ++ ++ P + AH+
Sbjct: 121 KTANVVLSDVFEQPTFAVDTHVSAISKRLHFVAQTATPLQVEQKIVSVLAPAELHQAHHT 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +GR P + C + C ++ +
Sbjct: 181 MIEYGRKYSMKLTPDKEVCQLIIDCDKLNE 210
>gi|149247468|ref|XP_001528146.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448100|gb|EDK42488.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 408
Score = 85.3 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 34 LKWPSPKGE-LYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEI--------ADTP 80
P+ L + F L+++++LS+Q+ D A L
Sbjct: 166 ESMPNTITPNLKTKDPKKYRFQLLISLMLSSQTKDEVNYDAMVKLERGLLRHFPKLGFCL 225
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ M + ++ YI +G + +K++ I ILIN+F+ IP+T++ + +LPG+G K
Sbjct: 226 ESMSKLSPNEIDAYIAKVGFHNRKAQYIQKACQILINDFNGDIPKTIQEIVKLPGVGPKM 285
Query: 141 ANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIPPKHQYNAHYW 197
++L +GI IGVD H+ R++ K TP K L +P K+ + +
Sbjct: 286 GYLLLQCGWGINLGIGVDVHLHRLAEMWHWVTPKASTPEKCRLELESWLPKKYWIDVNPL 345
Query: 198 LVLHGRYVCKARKPQCQSCII--SNLCKRIKQ 227
+V G+ +C R P C C + LCK +
Sbjct: 346 MVGFGQVICVPRAPNCDICSLGRKGLCKAADK 377
>gi|300705245|ref|YP_003746848.1| adenine DNA glycosylase [Ralstonia solanacearum CFBP2957]
gi|299072909|emb|CBJ44265.1| adenine DNA glycosylase [Ralstonia solanacearum CFBP2957]
Length = 382
Score = 85.3 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 38 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTVQALAAAPADDVMAAWA 97
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ + P+ E L LPGIGR A I + ++G+ +
Sbjct: 98 GLGYYT-RARNLHRCAQIVVADHGGVFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 156
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYN-----AHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K VE+++ RI L+ G VC K
Sbjct: 157 DGNVKRVFARVFGVDGFPGDKRVEEAMWRIAEAVLPAADGIQPYTQGLMDLGATVCTRGK 216
Query: 211 PQCQ----SCIISNLCKRIK 226
C +C + +LC+ +
Sbjct: 217 AACLTGERACPLESLCEARR 236
>gi|294630667|ref|ZP_06709227.1| A/G-specific adenine glycosylase [Streptomyces sp. e14]
gi|292834000|gb|EFF92349.1| A/G-specific adenine glycosylase [Streptomyces sp. e14]
Length = 315
Score = 85.3 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 11/198 (5%)
Query: 35 KWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + + ++V+ + Q+ V + E P + +
Sbjct: 36 WFDGNARDLPWRRADAGAWGVMVSEFMLQQTPVNRVLPVYEQWLERWPRPADLAKEAPGE 95
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+G R+ + + + +P L LPGIG A + S A+G
Sbjct: 96 AVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPTEHAQLLALPGIGEYTAAAVASFAYG 154
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH--QYNAHYWLVLHGRY 204
+DT++ R+ R PN + ++P + G
Sbjct: 155 QRHAVLDTNVRRVLARAVTGVQYPPNATTAAERRLARALLPEDERTAARWAAASMELGAL 214
Query: 205 VCKARKPQCQSCIISNLC 222
VC A+ C C IS C
Sbjct: 215 VCTAKNESCHRCPISGHC 232
>gi|1772974|emb|CAA70865.1| endonuclease III homologue 1 [Homo sapiens]
Length = 303
Score = 85.3 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 121 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 180
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 181 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 240
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C P+C +C+ LC
Sbjct: 241 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 300
Query: 226 K 226
+
Sbjct: 301 Q 301
>gi|323485089|ref|ZP_08090442.1| hypothetical protein HMPREF9474_02193 [Clostridium symbiosum
WAL-14163]
gi|323401645|gb|EGA93990.1| hypothetical protein HMPREF9474_02193 [Clostridium symbiosum
WAL-14163]
Length = 175
Score = 85.3 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 80/159 (50%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + EI ++P L Y + L+V+V L+AQ TD VN + L++
Sbjct: 1 MTKKELALEIIKRLKEEYPDAGCTLDYNQAWKLLVSVRLAAQCTDARVNVVVQDLYDKFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + K++ +R G+ R K+ +I + IL ++ K+P+ + L +LPG+GR
Sbjct: 61 DVKALAEADVDKIEEIVRPCGLGRSKARDINACMKILWEQYGGKVPEDFDALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
K AN+I+ FG P I DTH R+ NR+GL K
Sbjct: 121 KSANLIMGDVFGKPAIVTDTHCIRLVNRMGLVDNIKDPK 159
>gi|78221297|ref|YP_383044.1| DNA-3-methyladenine glycosylase III [Geobacter metallireducens
GS-15]
gi|78192552|gb|ABB30319.1| DNA-3-methyladenine glycosylase III [Geobacter metallireducens
GS-15]
Length = 223
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKM 83
L+EIF + + P+ F + V +L+ + NV KA +L + +P+ +
Sbjct: 6 LQEIFDILHAAYG-PRHWWPADTPFEVCVGAILTQNTNWGNVEKAISNLKRESLLSPEAL 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILI--------NEFDNKIPQTLEGLTRLPG 135
+ L IR G + KS + + L F E L + G
Sbjct: 65 RDVPAASLAEAIRPAGYFNVKSLRLKDFAGYLWERHGGSLERMFAGDWHALREELLGVRG 124
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK--HQY 192
IG + A+ IL A G PT VD + R+ +G+ G ++V + +PP
Sbjct: 125 IGPETADSILLYAGGKPTFVVDAYTKRLFAALGILNGSAGYDEVRDLFMANLPPDVRLFN 184
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V HG+ C+ ++P C C + C+
Sbjct: 185 EYHALIVEHGKRHCR-KRPLCPGCGLHLFCRS 215
>gi|1753174|gb|AAC51136.1| endonuclease III [Homo sapiens]
gi|1881376|dbj|BAA19413.1| endonuclease III homolog [Homo sapiens]
gi|3550834|dbj|BAA32695.1| NTHL1/NTH1 [Homo sapiens]
gi|12804311|gb|AAH03014.1| NTHL1 protein [Homo sapiens]
Length = 304
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 122 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 181
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 182 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 241
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C P+C +C+ LC
Sbjct: 242 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 301
Query: 226 K 226
+
Sbjct: 302 Q 302
>gi|294056218|ref|YP_003549876.1| HhH-GPD family protein [Coraliomargarita akajimensis DSM 45221]
gi|293615551|gb|ADE55706.1| HhH-GPD family protein [Coraliomargarita akajimensis DSM 45221]
Length = 338
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 12/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + S + L + + +V+ L++ Q+ + + + +
Sbjct: 8 IPAFQQALLDWYASAQRPLPWRTEPSLYRTVVSELMAQQTQIQTMLPYFERWMQRFPDFE 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + + +G Y + + P T E LPGIG +
Sbjct: 68 ALAAAPADDVLKHWEGLGYYSRARNLHKLAKEYVSRNP---KPATREEWQLLPGIGPYTS 124
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ------SLLRIIPPKHQYNAH 195
I S+A P VD ++ RI R+ N E ++ +
Sbjct: 125 AAISSIAQDFPAAVVDGNVVRILARLTADKRSFKNNGEAVKAFTPLADEVLNQNAPGTHN 184
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCK 223
++ G +C+ P C C + C+
Sbjct: 185 QAMMELGATLCQKHNPLCTVCPVVQFCQ 212
>gi|255567178|ref|XP_002524570.1| A/G-specific adenine glycosylase muty, putative [Ricinus communis]
gi|223536123|gb|EEF37778.1| A/G-specific adenine glycosylase muty, putative [Ricinus communis]
Length = 775
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 25/210 (11%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYV-----NH------------FTLIVAVLLSAQSTDVN 65
KE ++I + + +L + N + + V+ ++ Q+
Sbjct: 34 KETQKIRESLLEWYDQNQRQLPWRRQKTTNPSQESEEEKEKRAYGIWVSEVMLQQTRVQT 93
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V T + +++ +G YR+ + I+
Sbjct: 94 VIDYYNRWMLKWPTIHHLAQASLEEVNEIWAGLGYYRRARFLLEGAKMIVAGGGFPNTVS 153
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQ 180
L ++PGIG A I S+AF VD ++ R+ R+ T K+ +
Sbjct: 154 ---SLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVVRVLTRLRAISANPKDSMTVKKLWK 210
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+++ P + + L+ G VC
Sbjct: 211 LAAQLVDPCRPGDFNQSLMELGATVCAPSN 240
>gi|219871473|ref|YP_002475848.1| A/G-specific DNA-adenine glycosylase [Haemophilus parasuis SH0165]
gi|219691677|gb|ACL32900.1| A/G-specific DNA-adenine glycosylase [Haemophilus parasuis SH0165]
Length = 324
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 6/167 (3%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + + T + ++ + +G Y ++ N+ + + +EF +
Sbjct: 1 MATVIPYFERFIQRFPTIIDLANAPIDEVLHLWTGLGYYA-RARNLHKAAQQIRDEFGGQ 59
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV---- 178
P + L G+GR A +LS P +D ++ R+ +R G + K
Sbjct: 60 FPTDFADVFALSGVGRSTAGAVLSSVLDAPYPILDGNVKRVLSRYFAVEGWSSEKTVENK 119
Query: 179 -EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
R+ P + + ++ G +C KP+C C + C+
Sbjct: 120 LWDLTARVTPTSQVADFNQAMMDLGAMICTRSKPKCFLCPLEKGCQA 166
>gi|109127234|ref|XP_001082772.1| PREDICTED: nth endonuclease III-like 1 [Macaca mulatta]
Length = 312
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C +P+CQ+C+ LC
Sbjct: 250 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVRPRCQACLNQALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|255020618|ref|ZP_05292681.1| A/G-specific adenine glycosylase [Acidithiobacillus caldus ATCC
51756]
gi|254970003|gb|EET27502.1| A/G-specific adenine glycosylase [Acidithiobacillus caldus ATCC
51756]
Length = 351
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 10/204 (4%)
Query: 30 YLFSLKWPS-PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
L + + +L + + + L +A +L Q+ L Q + +
Sbjct: 3 ELLLPWYRRCGRHDLPWRKTQDDYALWLAEILLQQTQVRTALPYYGRLLAHFPRWQDLAS 62
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ +G Y + + +++ + + P+ LPG+GR A +L
Sbjct: 63 APLDAVLAQWSGLGYYARARNA-HRAAQMVVRDHGGRFPKDRASAMALPGVGRSTAAAVL 121
Query: 146 SMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVL 200
+ A+G +D + R+ GL ++ L ++ P ++ + +
Sbjct: 122 ASAYGQDEAILDANARRVLFRTAGLVGEPRSAANDRRLWQLAAMETPRGTAHDYNQAIQD 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G C++R+P C C + C+
Sbjct: 182 LGAIHCRSRRPDCPGCPLRPRCRA 205
>gi|154304871|ref|XP_001552839.1| hypothetical protein BC1G_09021 [Botryotinia fuckeliana B05.10]
gi|150853883|gb|EDN29075.1| hypothetical protein BC1G_09021 [Botryotinia fuckeliana B05.10]
Length = 437
Score = 85.0 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD----------TPQKMLAIGEKKLQNYIRTI 98
+ + A++LS+Q+ D A L+ T +LA+ K L I +
Sbjct: 164 YHTLTALMLSSQTKDTTNAVAMNRLYTELPAHKEGAPIGLTLDNILAVDPKLLNELIWVV 223
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VD 157
G + K++ I + + IL ++++ IP T+EGL LPG+G K A + +S A+G VD
Sbjct: 224 GFHNNKTKYIKAAAEILRDQWNGDIPDTIEGLMSLPGVGPKMAYLCMSSAWGRTEGIGVD 283
Query: 158 THIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
H+ RI+N G K P + +L +P + + ++ LV G+ VC +C SC
Sbjct: 284 VHVHRITNMWGWHTTKGPEETRLALQAWLPKELWHEINWLLVGFGQTVCLPVGKKCGSCE 343
Query: 218 I--SNLCKR 224
+ + LCK
Sbjct: 344 LGMNGLCKA 352
>gi|170035458|ref|XP_001845586.1| endonuclease iii [Culex quinquefasciatus]
gi|167877498|gb|EDS40881.1| endonuclease iii [Culex quinquefasciatus]
Length = 363
Score = 85.0 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 101/182 (55%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V+++LS+Q+ D + + L + TP++M+A + L+ I + Y+ K++ I
Sbjct: 163 FHTLVSLMLSSQTKDQANFECMQRLRKHGLTPEQMVATDVETLEKLIHPVSFYKNKAKFI 222
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S +L++ +D IP T+EGL +LPG+G K A++ + A+ I T VDTH+ RISN +
Sbjct: 223 RQTSALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCMGAAWNIVTGIGVDTHVHRISNWL 282
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P +TP + L R +P + ++ LV G+ +C + P+C C + +C
Sbjct: 283 GWVPRETRTPEETRLLLERWLPFELWEEVNHLLVGFGQTICTSTYPRCNECGNAEICPAR 342
Query: 226 KQ 227
+
Sbjct: 343 GK 344
>gi|328771332|gb|EGF81372.1| hypothetical protein BATDEDRAFT_10576 [Batrachochytrium
dendrobatidis JAM81]
Length = 266
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD---TPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + A+ LS+Q+ D A +L T + +LA+ K L YI +G + +K+
Sbjct: 50 YQTLTALQLSSQTKDAVTAGAIANLKSHEPGGLTVESILAMDPKTLDGYISKVGFHNRKA 109
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRIS 164
+ + IL ++++ IP TL GL LPGIG K A++ + A+ VDTH+ RIS
Sbjct: 110 LYMKQTAEILKTQYNSDIPDTLSGLMSLPGIGPKMAHLAMQEAWNQTVGIGVDTHVHRIS 169
Query: 165 NRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+RIG KTP + L +P ++ + LV G+ +C P+C C +S+LC
Sbjct: 170 HRIGWTKYLKTPEHSRKELEEWLPRQYWNEINKLLVGFGQTLCLPVGPKCTECPVSHLCP 229
Query: 224 RI 225
RI
Sbjct: 230 RI 231
>gi|170063194|ref|XP_001866998.1| endonuclease iii [Culex quinquefasciatus]
gi|167880905|gb|EDS44288.1| endonuclease iii [Culex quinquefasciatus]
Length = 361
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V+++LS+Q+ D + + L + TP++M+A ++L+ I + Y+ K++ I
Sbjct: 161 FHTLVSLMLSSQTKDQANFECMQRLRKHGLTPEQMVATDVERLEKLIHPVSFYKNKAKFI 220
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S +L++ +D IP T+EGL +LPG+G K A++ + A+ I T VDTH+ RISN +
Sbjct: 221 RQTSALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCMGAAWNIVTGIGVDTHVHRISNWL 280
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P +TP + L R +P + ++ LV G+ +C + P+C C + +C
Sbjct: 281 GWVPRETRTPEETRLLLERWLPFELWEEVNHLLVGFGQTICTSTYPRCNECGNAEICPAR 340
Query: 226 KQ 227
+
Sbjct: 341 GK 342
>gi|6850320|gb|AAF29397.1|AC009999_17 Contains similarity to an endonuclease III homolog from Homo
sapiens gb|U81285, and contains an Endonuclease III
PF|00730 domain [Arabidopsis thaliana]
Length = 402
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 39/264 (14%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY---------YVNH----F 49
S++ S S G P+ E++ PS + + ++ F
Sbjct: 122 STEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERRF 181
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+++ LLS+Q+ + A + L + TP+ + E ++ I +G Y +K+ N+
Sbjct: 182 YVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNV 241
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
++ I + E+D IP+TLE L LPG+G K A+++L + + I VDTH+ RI NR+
Sbjct: 242 KKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRL 301
Query: 168 GLA-----------------------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G +P + +L + +P ++ LV G+
Sbjct: 302 GWVSKPGTKQFAYLLLVTYLYFVLDQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQT 361
Query: 205 VCKARKPQCQSCIISNLCKR-IKQ 227
+C +P C +C I+ +C K+
Sbjct: 362 ICTPLRPHCGTCSITEICPSAFKE 385
>gi|229581431|ref|YP_002839830.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
Y.N.15.51]
gi|228012147|gb|ACP47908.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
Y.N.15.51]
Length = 233
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQK 82
+L I+ + + + L N F ++VA +LS STD + KA L + TP+K
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT------LEGLTRLPGI 136
+ ++N ++ G+Y+ K++ + +S I++ +++ I E L + GI
Sbjct: 71 LSDADLSDIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR +CKARKP C SCII C+
Sbjct: 191 HLLIAHGRQICKARKPLCNSCIIKECCEYY 220
>gi|258651104|ref|YP_003200260.1| HhH-GPD family protein [Nakamurella multipartita DSM 44233]
gi|258554329|gb|ACV77271.1| HhH-GPD family protein [Nakamurella multipartita DSM 44233]
Length = 285
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 72/205 (35%), Gaps = 11/205 (5%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + ++V+ ++ Q+ V + P + A
Sbjct: 1 MLEFYDRHARDLPWRGPSATPWGVLVSEVMLQQTPVNRVLPVWTQWLDRWPRPADLAAES 60
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + + +P T+E L +LPGIG A + +
Sbjct: 61 AGEAIRAWGRLGYPRRALR-LHGAATAITAVHGGAVPATVEELLQLPGIGEYTARAVAAF 119
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPK--HQYNAHYWLVLH 201
AFG VDT++ R+ +R+ + + +P ++
Sbjct: 120 AFGARVPVVDTNVRRVLSRVVRGVDEPRASATAADRLEMSAYLPEDPATAARFSVAVMEL 179
Query: 202 GRYVCKARKPQCQSCIISNLCKRIK 226
G C A +P C+ C + C+ +
Sbjct: 180 GALRCTAVRPDCERCPLLGRCRWQR 204
>gi|225849812|ref|YP_002730046.1| T/G-specific DNA glycosylase [Persephonella marina EX-H1]
gi|225646157|gb|ACO04343.1| T/G-specific DNA glycosylase [Persephonella marina EX-H1]
Length = 228
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 83/210 (39%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++ W K + + + +++A + ++ V K K +
Sbjct: 16 DVKHFHEKLFSWWEDHKRIYPWRFEKDPYKVLIAEIFLHRTNSSQVEKVYKDFIDKFPDI 75
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ +L ++++ ++++G+ + + E + IL ++ IP + L LPGIG
Sbjct: 76 RSLLKAKKEEISPLLQSLGL-KWRQELFNKMILILREKYGGNIPLNHKELKSLPGIGDYI 134
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK----VEQSLLRIIPPKHQYNAHY 196
A ++ P +D++I R++ R+ ++ + +I +Y
Sbjct: 135 AAAVIIFTLNNPLPLLDSNIVRVTGRLFCLKITDSSRRSRLFRNYIYCLIYKNDPRVFYY 194
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
L+ VCK + P C C + N C K
Sbjct: 195 ALIDFAALVCKPKDPDCDKCPLRNFCCIYK 224
>gi|319940815|ref|ZP_08015154.1| A/G-specific adenine glycosylase MutY [Sutterella wadsworthensis
3_1_45B]
gi|319805697|gb|EFW02478.1| A/G-specific adenine glycosylase MutY [Sutterella wadsworthensis
3_1_45B]
Length = 367
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 8/188 (4%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y + ++ ++ Q+ V + + + + A E ++ +G Y +
Sbjct: 27 YHTPYERWLSEVMLQQTQVETVIPYFERFLAAFPSVEALAAASEAQVMKLWAGLGYYS-R 85
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRI 163
N+ + +++ E + P T + L +LPGIG A + + G +D ++ R+
Sbjct: 86 GRNLHRAAQMVVKEMQGRFPTTADELIKLPGIGPSTAAAVAAFTSGEAKEPMIDGNVKRV 145
Query: 164 SNRIGLAPGKTPNKVEQ-----SLLRIIPPKHQ-YNAHYWLVLHGRYVCKARKPQCQSCI 217
RI PG+ K + + R +P L+ G VC+ + P C +C
Sbjct: 146 LARIDGIPGRVGEKAFETALAAAARRKLPGSECIAAYTQGLMDLGSLVCRRKSPNCAACP 205
Query: 218 ISNLCKRI 225
+ N CK
Sbjct: 206 VRNFCKAF 213
>gi|171909878|ref|ZP_02925348.1| A/G-specific adenine glycosylase [Verrucomicrobium spinosum DSM
4136]
Length = 343
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 16/209 (7%)
Query: 27 EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNV--NKATKHLFEIADTPQ 81
+I + + + + + + ++V+ ++ Q+ V E
Sbjct: 11 KIAHALEAWFAVSGRDYPWRRTTDPYAILVSEMMLQQTQISTVLDRGYYARWMERFPNTA 70
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ E ++ +G YR ++ + ++ + +E P TLEG+ LPG+G A
Sbjct: 71 TLAVADEAEVLRVWEGLGYYR-RARFLQQMAQRVESEHGGIFPATLEGVRALPGVGDYTA 129
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--------QYN 193
+ S A VD ++ R+ +R+ TP + + R+
Sbjct: 130 GAVCSFAHDAAAPIVDGNVARVLSRVW--DDATPVDSREGMARLWTRSRALVEAAQSPRV 187
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L+ G+ +C+ P C SC + C
Sbjct: 188 FNSALMELGQTICRVSAPNCGSCPVQPHC 216
>gi|11181952|emb|CAC16135.1| endonuclease III homologue [Arabidopsis thaliana]
Length = 354
Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ LLS+Q+ D N A L + TP+ + E ++ I +G Y +K+
Sbjct: 149 FAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATY 208
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP +L+ L LPGIG K A++IL + + I VDTH+ RI NR
Sbjct: 209 MKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 268
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G +P + +L + +P + + LV G+ +C +P+C++C +S
Sbjct: 269 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMICTPLRPRCEACSVS 328
Query: 220 NLCK-RIKQ 227
LC K+
Sbjct: 329 KLCPAAFKE 337
>gi|255657892|ref|ZP_05403301.1| A/G-specific adenine glycosylase [Mitsuokella multacida DSM 20544]
gi|260850083|gb|EEX70090.1| A/G-specific adenine glycosylase [Mitsuokella multacida DSM 20544]
Length = 370
Score = 85.0 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 43 LYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG 99
L + + ++ ++ Q+ V E + + ++ L + +G
Sbjct: 38 LPWREEVTPYHTWLSEIMLQQTRASAVIPYYTRFLEALPDIESLARCDDELLMKLWQGLG 97
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
Y ++ N+ + ++ E+ K+P L LPGIGR A+ I S+AFG+P VD +
Sbjct: 98 YYS-RARNLKKAAGVICQEYGGKLPADFAALLELPGIGRYTASAIGSIAFGLPLPAVDGN 156
Query: 160 -----IFRISNRIGLAPGKTPNKVEQSLLRIIPP-KHQYNAHYWLVLHGRYVCKAR-KPQ 212
+ + +A VE++L P + + + G +C P
Sbjct: 157 ILRVTMRVLQCGEDIAQPAVRRAVEEALAPYYPSGQAAGALNQAFMDLGATICLPHGAPH 216
Query: 213 CQSCIISNLC 222
C +C ++ LC
Sbjct: 217 CAACPLARLC 226
>gi|292657009|ref|YP_003536906.1| A/G-specific adenine glycosylase [Haloferax volcanii DS2]
gi|291370515|gb|ADE02742.1| A/G-specific adenine glycosylase [Haloferax volcanii DS2]
Length = 305
Score = 85.0 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ E + + + + + + + + ++V+ ++S Q+ V +A + + T
Sbjct: 13 DREAVQSALTEWYEADHRDFPWRRTDDPYEILVSEVMSQQTQLGRVVEAWEAFLDEWPTT 72
Query: 81 QKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+ A + + + Y +++ + + + + + P+T +GL+ L G+G
Sbjct: 73 ADLAAADRADVVGFWTDHRLGYNNRAKYLHEAARQVEEDHGGEFPRTPDGLSELMGVGPY 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
AN + S AF VDT++ R+ +R P + ++P + ++
Sbjct: 133 TANAVASFAFNNGDAVVDTNVKRVLHRAFAVPDDDAAFE-AAASELMPDGESRVWNNAIM 191
Query: 200 LHGRYVCKARKPQCQS--CIISNLCKRIK 226
G C + P C C C +
Sbjct: 192 ELGGVAC-GKTPTCDESGCPWRRFCHAYE 219
>gi|4505471|ref|NP_002519.1| endonuclease III-like protein 1 [Homo sapiens]
gi|29840795|sp|P78549|NTHL1_HUMAN RecName: Full=Endonuclease III-like protein 1
gi|20136744|gb|AAM11786.1|AF498098_1 nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|3522921|gb|AAC34209.1| hNTH1 [Homo sapiens]
gi|119605968|gb|EAW85562.1| nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|261860536|dbj|BAI46790.1| nth endonuclease III-like protein 1 [synthetic construct]
gi|311350018|gb|ADP92214.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350020|gb|ADP92215.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350022|gb|ADP92216.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350024|gb|ADP92217.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350026|gb|ADP92218.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350028|gb|ADP92219.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350030|gb|ADP92220.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350032|gb|ADP92221.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350034|gb|ADP92222.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350036|gb|ADP92223.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350038|gb|ADP92224.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350040|gb|ADP92225.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350042|gb|ADP92226.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350044|gb|ADP92227.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350046|gb|ADP92228.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350048|gb|ADP92229.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350050|gb|ADP92230.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350052|gb|ADP92231.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350054|gb|ADP92232.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350056|gb|ADP92233.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350058|gb|ADP92234.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350060|gb|ADP92235.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350062|gb|ADP92236.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350064|gb|ADP92237.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350066|gb|ADP92238.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350068|gb|ADP92239.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350070|gb|ADP92240.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350072|gb|ADP92241.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350074|gb|ADP92242.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350076|gb|ADP92243.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350078|gb|ADP92244.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350080|gb|ADP92245.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350082|gb|ADP92246.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350084|gb|ADP92247.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350086|gb|ADP92248.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350088|gb|ADP92249.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350090|gb|ADP92250.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350092|gb|ADP92251.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350094|gb|ADP92252.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350096|gb|ADP92253.1| endonuclease III-like protein 1 [Homo sapiens]
Length = 312
Score = 85.0 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C P+C +C+ LC
Sbjct: 250 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|70607241|ref|YP_256111.1| endonuclease III [Sulfolobus acidocaldarius DSM 639]
gi|68567889|gb|AAY80818.1| endonuclease III [Sulfolobus acidocaldarius DSM 639]
Length = 223
Score = 85.0 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 13/214 (6%)
Query: 25 LEEIFYLFSLKWPSPKGEL-------YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI- 76
+++ ++ + E N F I+A +LS STD + A L E
Sbjct: 4 ANQLYMKLREEYKIDQKEFISSYICGKTRNVFATILATILSQNSTDKSALIAFSKLNETV 63
Query: 77 ----ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
D + + +N+ + + L + + + LT
Sbjct: 64 GEITPDRIKHADINTIIDAIRVAGLGNSKARYIKNVAEVINDLDLNIEIDCQKLRDFLTA 123
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQ 191
+ GIG K A+V+L F +DTHI R+ +R+G K + + +
Sbjct: 124 IEGIGDKTADVVLLTCFRCREFPIDTHIRRVISRLGFLGSSPKYKDISEYFKTRFSSEDL 183
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
N H+ L+ HGR CK+RKP C C+I + CK
Sbjct: 184 LNLHHLLIAHGRKTCKSRKPICDKCVIRDYCKYY 217
>gi|300868669|ref|ZP_07113280.1| HhH-GPD family protein [Oscillatoria sp. PCC 6506]
gi|300333230|emb|CBN58472.1| HhH-GPD family protein [Oscillatoria sp. PCC 6506]
Length = 246
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ +++ VA L ++ + + + T + + K + ++ +G++ +
Sbjct: 43 TDPYSIFVAEFLLQKTGALTASPVYETFISCYPTLEILAVAPVKDVACLLQPLGLHFRAQ 102
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ I++ + KIP++ L +LPG+G A I + AFG P +DT++ RI
Sbjct: 103 R-LCESVQIIVERYSGKIPESEAELLKLPGVGLYTARSICANAFGQPKAVLDTNVARIFE 161
Query: 166 RIGLAPGKTPNK----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
R G + ++ ++ P + L+ G VC A+KP+C C + +
Sbjct: 162 RFFGLLGNRVKSRCQLLWKAAEQVAPDTEVGKWNLTLLDFGAAVCTAKKPRCGDCPLRDR 221
Query: 222 CKRI 225
C+ +
Sbjct: 222 CQAV 225
>gi|317052674|ref|YP_004113790.1| HhH-GPD family protein [Desulfurispirillum indicum S5]
gi|316947758|gb|ADU67234.1| HhH-GPD family protein [Desulfurispirillum indicum S5]
Length = 340
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 40 KGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI 95
+ EL + + + V+ ++ Q+ + V + E + A
Sbjct: 26 RDELPWRQPGMTPYGIWVSEVMLQQTQVMRVIPYFQAFMERFPHVFSLAAASWDDFLPLY 85
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
R +G YR + EN+++ + +++ + D P+ + L LPGIG A+ ILS +G P +
Sbjct: 86 RGLGYYR-RGENMLACARLVVEQHDGVFPRDRKQLKALPGIGDYTASAILSFGYGEPVLA 144
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQ-YNAHYWLVLHGRYVCKARKPQ 212
DT++ ++ R K E ++ + + ++ VC+ + P
Sbjct: 145 FDTNMQKVFGRFLQGSRKAVVDKEALEGSLVDLFRQRPMGWFNGAVMDFAGAVCR-KVPL 203
Query: 213 CQSCIISNLCKRIKQ 227
C SC + C+ +
Sbjct: 204 CASCPVRTHCRYFAE 218
>gi|169831405|ref|YP_001717387.1| HhH-GPD family protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638249|gb|ACA59755.1| HhH-GPD family protein [Candidatus Desulforudis audaxviator MP104C]
Length = 250
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
++ + P+ + F +IV +L+ Q + NV KA +L + + +LA+
Sbjct: 24 VYERLYAHYG-PRHWWPAESAFEVIVGAILTQQVSWRNVEKAIANLKARDSLSVEGILAL 82
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTRLPGIGR 138
+L IR Y +K++ + + ++ +F + L + GIG+
Sbjct: 83 PHAELGLLIRPTRYYNQKTQRLKDVCLVIREDFGGDTGLFLQQEPGALRRRLLAVRGIGK 142
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIP--PKHQYNAH 195
+ A+ IL A G P +D + RI R+GLA G ++ ++++ +P H
Sbjct: 143 ETADSILLYAAGRPVFVIDHYTHRILKRLGLAHGGESYDQLQHLFEAHLPLNAALFNEYH 202
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
LV HG +C P+C C +S+LC
Sbjct: 203 ALLVTHGHRLCLKTGPRCPECPLSDLC 229
>gi|116178766|ref|XP_001219232.1| hypothetical protein CHGG_00011 [Chaetomium globosum CBS 148.51]
gi|88184308|gb|EAQ91776.1| hypothetical protein CHGG_00011 [Chaetomium globosum CBS 148.51]
Length = 1097
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 69/218 (31%), Gaps = 39/218 (17%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + A E+ + + +G Y +
Sbjct: 639 RRAYEVWISEVMLQQTRVATVVAYWTRWMARWPQIGDLAAAEEEDVLGVWQGLGYYSRAR 698
Query: 106 ENIISLSHILINEFDNKIPQTLEG---------------LTRLPGIGRKGANVILSMAFG 150
++ + + E L RLPG+GR A + ++ FG
Sbjct: 699 RVWLAAREVCAVGDGDGDGDGGEDGDGGGEGILPGTVEGLMRLPGVGRYTAGAVAAIVFG 758
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---------------------K 189
+ VD ++ R+ +R K ++ + ++ +
Sbjct: 759 VAAPMVDGNVLRVLSRQMGLLAD--VKADKKAVDLLWEAAGDLAKAVAEDGEDGDKGVNE 816
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L+ G VC KP C +C I+ C+ +
Sbjct: 817 RPGQWGQALMELGSTVCTP-KPNCAACPITETCRAYAE 853
>gi|320334742|ref|YP_004171453.1| iron-sulfur cluster loop [Deinococcus maricopensis DSM 21211]
gi|319756031|gb|ADV67788.1| iron-sulfur cluster loop [Deinococcus maricopensis DSM 21211]
Length = 247
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 84/239 (35%), Gaps = 15/239 (6%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPK-ELEEIFYLFSLKW-PSPKGELYYVNHFTLIVAVLLS 58
M L + P+ +L I ++ P+ ++ +L+
Sbjct: 1 MPRRSALPPRAPRPTLAQQHPPRPDLGVIAARLRERYLPTLPAPRVSAEPLDDLIEAVLN 60
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG----------IYRKKSENI 108
Q+T + L T LA G ++ +R G ++ +
Sbjct: 61 QQNTRATTERQYAALRRAYPTWDAALADGPDGIEAVLRDAGGGLARVKADYVWNILYALL 120
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
L + L LPG+G K A+ +L P + VD HI R+S R+
Sbjct: 121 ERGDLSLQHLRHLDDADARTALESLPGVGMKTASALLLFDLARPAMPVDGHIDRVSKRLH 180
Query: 169 LAPG-KTPNKVEQSLLRIIPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
L P K E+ ++P Y H + HGR C R P+C +C++ +LC
Sbjct: 181 LIPERWNVLKAERWYDEVLPRDWAQRYAYHVATIRHGRETCLTRAPRCNACVLRDLCPS 239
>gi|227908769|ref|NP_032769.2| endonuclease III-like protein 1 [Mus musculus]
Length = 300
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T + +L + L I +G +R K + I
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYI 177
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ IL ++ IP ++ L LPG+G K A++ +++A+ I I VDTH+ RI+NR+
Sbjct: 178 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANRL 237
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + ++L +P + LV G+ +C P+CQ+C+ LC
Sbjct: 238 RWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNKALCPAA 297
Query: 226 K 226
+
Sbjct: 298 Q 298
>gi|56753569|gb|AAW24987.1| SJCHGC01733 protein [Schistosoma japonicum]
Length = 269
Score = 84.6 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENII 109
++++++LS+Q+ D A + L T + + + L+ I +G Y+ K+ NI
Sbjct: 73 QVLISLMLSSQTKDQVTAAAMERLKSKGCTLAMLTDMKTEDLEELIYPVGFYKTKALNIK 132
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIG 168
I+ ++D+ IP+T++ L LPG+G K A + + A+ T VDTH+ RI+NR+
Sbjct: 133 KTCEIIKQKYDSDIPKTVKELCTLPGVGPKMAYLAMKCAWKKVTGIGVDTHVHRITNRLK 192
Query: 169 LA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ P KTP + +L +P ++ + LV G+ +C+ P C C+ ++C
Sbjct: 193 WSKRPTKTPEETRMALEEWLPREYWDEINLLLVGFGQQICRPVNPNCMGCLNRSICPSAS 252
Query: 227 Q 227
+
Sbjct: 253 K 253
>gi|207727842|ref|YP_002256236.1| a/g-specific adenine glycosylase protein [Ralstonia solanacearum
MolK2]
gi|206591083|emb|CAQ56695.1| a/g-specific adenine glycosylase protein [Ralstonia solanacearum
MolK2]
Length = 422
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 78 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTVQALAAAPADDVMAAWA 137
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ E L LPGIGR A I + ++G+ +
Sbjct: 138 GLGYYT-RARNLHRCAQIVVAEHGGVFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 196
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYN-----AHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K VE+++ RI L+ G VC K
Sbjct: 197 DGNVKRVFARVFGIDGFPGDKRVEETMWRIAEAVLPSADGIQSYTQGLMDLGATVCTRGK 256
Query: 211 PQCQ----SCIISNLCKRIK 226
C +C + +LC+ +
Sbjct: 257 AACLTGERACPLESLCEARR 276
>gi|83746561|ref|ZP_00943611.1| A/G-specific adenine DNA glycosylase [Ralstonia solanacearum UW551]
gi|83726695|gb|EAP73823.1| A/G-specific adenine DNA glycosylase [Ralstonia solanacearum UW551]
Length = 382
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 38 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTVQALAAAPADDVMAAWA 97
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ E L LPGIGR A I + ++G+ +
Sbjct: 98 GLGYYT-RARNLHRCAQIVVAEHGGVFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 156
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYN-----AHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K VE+++ RI L+ G VC K
Sbjct: 157 DGNVKRVFARVFGIDGFPGDKRVEETMWRIAEAVLPSADGIQSYTQGLMDLGATVCTRGK 216
Query: 211 PQCQ----SCIISNLCKRIK 226
C +C + +LC+ +
Sbjct: 217 AACLTGERACPLESLCEARR 236
>gi|86742964|ref|YP_483364.1| putative endonuclease III [Frankia sp. CcI3]
gi|86569826|gb|ABD13635.1| putative Endonuclease III [Frankia sp. CcI3]
Length = 178
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 80/136 (58%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+L++ +R G +R K+ ++I + L FD ++P++L L LPG+GRK ANV+L AF
Sbjct: 18 ELEDMLRPTGFFRAKANSLIGIGAALTERFDGEVPRSLAALVTLPGVGRKTANVVLGHAF 77
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
+P I VDTH+ R+S R GL P KVE L +I + A ++ HGR +C +R
Sbjct: 78 DMPGITVDTHVGRLSRRFGLTTQTDPVKVESDLAALIEQRDWTIASDRMIFHGRRICHSR 137
Query: 210 KPQCQSCIISNLCKRI 225
+P C +C ++ LC
Sbjct: 138 RPACGACGLARLCPSF 153
>gi|313896985|ref|ZP_07830532.1| putative A/G-specific adenine glycosylase [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312974432|gb|EFR39900.1| putative A/G-specific adenine glycosylase [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 366
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Query: 37 PSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + EL + + + + ++ ++ Q+ V T + + + E L
Sbjct: 27 PDTR-ELPWRDEPTPYHVWISEIMLQQTRANVVRGYYLRFLAALPTVRDLADVDEDVLMK 85
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+ +G Y ++ N+ + ++ ++P + L LPGIGR A+ I S A+G P
Sbjct: 86 LWQGLGYYS-RARNLRRAAQAIVETHGGELPNDFDALLTLPGIGRYTASAISSFAYGRPC 144
Query: 154 IGVDTHIFRISNR-----IGLAPGKTPNKVEQSLLRIIPP-KHQYNAHYWLVLHGRYVCK 207
VD + R++ R I +A + +E+SL P K + + G VC
Sbjct: 145 PAVDGNFLRVAARVTANPIDIAKDASKRALEESLRPCYPTGKDAGLLNEAFMDLGATVCL 204
Query: 208 AR-KPQCQSCIISNLC 222
P C+ C + LC
Sbjct: 205 PNGAPLCRLCPAARLC 220
>gi|291226292|ref|XP_002733128.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 318
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++V+++LS+Q+ D + A L T +L +KKL I +G +++K E I
Sbjct: 127 YQILVSLMLSSQTKDQVTSAAMDRLKTHGLTISNILKTSDKKLGELIYPVGFWKRKVEYI 186
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
S +L +++DN IP T+ L +LPG+G K A + +++A+ T VDTH+ RISNR+
Sbjct: 187 KKTSTLLESQYDNDIPSTISELCQLPGVGPKMAYLCMNIAWHQTTGIGVDTHVHRISNRL 246
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + L +P ++ LV G+ +C + P+CQ C+ ++ C
Sbjct: 247 KWVKSTTKTPEDTRKILQEWLPRSLWIEINWLLVGFGQQICLSVSPKCQQCLNNHTCLFG 306
Query: 226 K 226
K
Sbjct: 307 K 307
>gi|254468692|ref|ZP_05082098.1| A/G-specific adenine glycosylase [beta proteobacterium KB13]
gi|207087502|gb|EDZ64785.1| A/G-specific adenine glycosylase [beta proteobacterium KB13]
Length = 294
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + + E ++ +Y +G Y ++ N+ + I+
Sbjct: 1 MLQQTQVSTVIPFYIKFIDRFQNIKHLAEASEDEVMSYWSGLGFYS-RARNLHKTARIIA 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTP 175
++ K P T E L +LPGIGR A ILS F +D ++ R+ + G+ +
Sbjct: 60 EQYSCKFPDTFESLIQLPGIGRSTAGAILSFCFKKKFAILDGNVKRVLTRFFGIQESISL 119
Query: 176 NKVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K E+ L +++P ++ G +C + PQC SC ++ C
Sbjct: 120 AKTEKDLWDLSEQLLPDGDIDIYTQGIMDFGATLCTPKNPQCHSCPMNQTC 170
>gi|322368914|ref|ZP_08043481.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
gi|320551645|gb|EFW93292.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
Length = 301
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 85/213 (39%), Gaps = 8/213 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
++ +++ + + S + + + ++V+ ++S Q+ V A + +
Sbjct: 6 WSIPDIDAVRDALVSWYESDHRTFPWRETDDPYAILVSEVMSQQTQLGRVVTAWEAFLDR 65
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGI-YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + + T + Y +++ + ++ +++E+D P+T + L L G
Sbjct: 66 WPTAADLADADRSAVVGFWTTHSLGYNNRAKYLHEAANQVVSEYDGAFPETPDELQNLQG 125
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
+G AN + S AF VDT++ R+ R P E++ ++P +
Sbjct: 126 VGPYTANAVASFAFNDGDAVVDTNVKRVLYRAFDVPDDD-AAFEEAASELMPDGESRVWN 184
Query: 196 YWLVLHGRYVCKARKPQCQS--CIISNLCKRIK 226
++ G C + P C + C C +
Sbjct: 185 NAVMELGGVAC-EKTPSCDTAGCPWREWCHAYE 216
>gi|1800271|gb|AAB41534.1| endonuclease III homolog 1, hNTH1 [Homo sapiens]
Length = 312
Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAIQRLRARGLAVDSILQTDDATLGKLIYPVGFWRSKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C P+C +C+ LC
Sbjct: 250 RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|239929735|ref|ZP_04686688.1| adenine glycosylase [Streptomyces ghanaensis ATCC 14672]
gi|291438060|ref|ZP_06577450.1| adenine glycosylase [Streptomyces ghanaensis ATCC 14672]
gi|291340955|gb|EFE67911.1| adenine glycosylase [Streptomyces ghanaensis ATCC 14672]
Length = 311
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ + Q+ V + P + A
Sbjct: 31 EWFDEHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWLARWPRPADLAAEAPG 90
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + +P L LPGIG A + S A+
Sbjct: 91 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVPTDHAQLLALPGIGEYTAAAVASFAY 149
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKHQYNAHYWL--VLHGR 203
G +DT++ R+ R PN + ++P + A + + G
Sbjct: 150 GQRHAVLDTNVRRVFARAVTGVQYPPNATTAAERRLARALLPEEASTAARWAAASMELGA 209
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ +C C I+ C
Sbjct: 210 LVCTAKNEECHRCPIAAQC 228
>gi|45593498|sp|O35980|NTHL1_MOUSE RecName: Full=Endonuclease III-like protein 1
gi|2351099|dbj|BAA22080.1| endonuclease III homologue [Mus musculus]
gi|2407946|emb|CAA70866.1| endonuclease III homologue 1 [Mus musculus]
gi|3219302|dbj|BAA28846.1| homologue of endonuclease III [Mus musculus]
gi|6688669|emb|CAB65239.1| Endonuclease III homologue 1 [Mus musculus]
gi|148690400|gb|EDL22347.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_b [Mus
musculus]
gi|187952063|gb|AAI38853.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
gi|187954093|gb|AAI38856.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
Length = 300
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T + +L + L I +G +R K + I
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYI 177
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ IL ++ IP ++ L LPG+G K A++ +++A+ I I VDTH+ RI+NR+
Sbjct: 178 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANRL 237
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + ++L +P + LV G+ +C P+CQ+C+ LC
Sbjct: 238 RWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNKALCPAA 297
Query: 226 K 226
+
Sbjct: 298 Q 298
>gi|207742246|ref|YP_002258638.1| a/g-specific adenine glycosylase protein [Ralstonia solanacearum
IPO1609]
gi|206593634|emb|CAQ60561.1| a/g-specific adenine glycosylase protein [Ralstonia solanacearum
IPO1609]
Length = 422
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 40 KGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ L + N + + ++ ++ Q+ V E T Q + A +
Sbjct: 78 RHHLPWQNTGDAYRVWLSEIMLQQTQVSAVLGYYARFVERFPTVQALAAAPADDVMAAWA 137
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + I++ E P+ E L LPGIGR A I + ++G+ +
Sbjct: 138 GLGYYT-RARNLHRCAQIVVAEHGGVFPRDPEALAALPGIGRSTAAAIAAFSYGVRAAIL 196
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYN-----AHYWLVLHGRYVCKARK 210
D ++ R+ R+ G +K VE+++ RI L+ G VC K
Sbjct: 197 DGNVKRVFARVFGIDGFPGDKRVEETMWRIAEAVLPSADGIQSYTQGLMDLGATVCTRGK 256
Query: 211 PQCQ----SCIISNLCKRIK 226
C +C + +LC+ +
Sbjct: 257 AACLTGERACPLESLCEARR 276
>gi|197124333|ref|YP_002136284.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174182|gb|ACG75155.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 657
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
E+ EI L + +P + +V ++LS ++ + L + ++
Sbjct: 32 AEVREIARALELLYGTPDLG-NKPDPVDELVYIVLSRKTREDAYQATYDALKRRFASWEE 90
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRL 133
+L E++++ + G+ ++K+ +++ L++ F K E L L
Sbjct: 91 LLRAPEREVEAIVHRGGLGKRKTASLVGALQALVDRFGSCTLRPALQWKDEALEEFLCSL 150
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-------TPNKVEQSLLRII 186
P I RK A I+ + G VDTH+ R+ R+G+ G +++++L ++
Sbjct: 151 PEISRKSAYCIMMYSMGRSVFPVDTHVGRVLQRLGIYKGTGFSLEGLDHKQLQRTLADVV 210
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
PP + + H LVLHGR VCKA P C +C + LC +
Sbjct: 211 PPNLRRSLHINLVLHGREVCKAVAPACDACELRQLCSHYR 250
>gi|238928177|ref|ZP_04659937.1| adenine glycosylase [Selenomonas flueggei ATCC 43531]
gi|238884137|gb|EEQ47775.1| adenine glycosylase [Selenomonas flueggei ATCC 43531]
Length = 369
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 13/205 (6%)
Query: 30 YLFSLKWPSPK--GELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
S +L + + + + ++ ++ Q+ V + +
Sbjct: 17 RALLTWHKSAPDTRDLPWRDEPTPYHVWISEIMLQQTRAAVVRAYYLRFLTALPSIHDLA 76
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
A+ + L + +G Y ++ N+ + +++ E +P L LPGIGR A+ I
Sbjct: 77 AVNDDALMKLWQGLGYYS-RARNLKRAAQVIVKEHGGDLPNDFNALLTLPGIGRYTASAI 135
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQ-----YNAHYWL 198
S A+G P VD + R++ RI + ++SL + + +
Sbjct: 136 ASFAYGQPHPAVDGNFLRVAARITANPIDIGKDSTKRSLEAALSVSYPEGRDAGLLNEAF 195
Query: 199 VLHGRYVCKAR-KPQCQSCIISNLC 222
+ G +C P C SC + LC
Sbjct: 196 MDLGATICLPHGAPLCHSCPAAQLC 220
>gi|254573634|ref|XP_002493926.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Pichia pastoris GS115]
gi|238033725|emb|CAY71747.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Pichia pastoris GS115]
Length = 359
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD--------TPQKMLAIGEKKLQNYIRTIGI 100
+ L+V+++LS+Q+ D + K + + Q +L + KL I IG
Sbjct: 131 YRLLVSLMLSSQTKDEVNYEVMKSMNDYFKSVGYENGLCLQAILDVEPTKLDELIHKIGF 190
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+ +K+ + S + I+ +F+ IP+ ++ +T LPG+G K ++L A+GI VD H
Sbjct: 191 HNRKTVYLKSAAVIVKEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIGVDVH 250
Query: 160 IFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII- 218
+ R++N KTP + +L + +P + + LV G+ +C R +C C +
Sbjct: 251 VDRLANMWKWVNTKTPEQTRLALEKWVPRELWQEINPVLVGFGQVICTPRGRRCDVCSLA 310
Query: 219 -SNLC 222
LC
Sbjct: 311 SKKLC 315
>gi|332672003|ref|YP_004455011.1| HhH-GPD family protein [Cellulomonas fimi ATCC 484]
gi|332341041|gb|AEE47624.1| HhH-GPD family protein [Cellulomonas fimi ATCC 484]
Length = 302
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 76/199 (38%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ ++ Q+ V V A + P + A
Sbjct: 16 AWFEEHARDLPWRAADRTPWGVLVSEVMLQQTPVVRVEPAWRAWMRRWPGPADVAAASTA 75
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + ++ +P L LPG+G A + + AF
Sbjct: 76 DVLRAWDRLGYPRRALR-LQECARAVVERHGGDVPDDEAALLALPGVGSYTAAAVRAFAF 134
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYWL--VLHGR 203
G ++ +DT++ R+ R + +R+ +P A + + G
Sbjct: 135 GRRSVVLDTNVRRVLARAAAGAALPAPAQTVAEVRLAASFVPADDAGAARWAAASMELGA 194
Query: 204 YVCKARKPQCQSCIISNLC 222
VC AR P+C +C + ++C
Sbjct: 195 LVCTARAPRCDACPVRDVC 213
>gi|262276829|ref|ZP_06054622.1| A/G-specific adenine glycosylase [alpha proteobacterium HIMB114]
gi|262223932|gb|EEY74391.1| A/G-specific adenine glycosylase [alpha proteobacterium HIMB114]
Length = 337
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVN-------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
I + + +L + H+ ++++ + Q+ + ++ ++
Sbjct: 5 ISKKILAWYQKYQRDLPWRKYKNQKDRHYKVLLSEFMLQQTQVKTALPFFNNFYKKINSL 64
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+K+ + K+ + +G YR +++ ++ S I+ +++ K+P E L LPGIG
Sbjct: 65 EKLSKTSQAKVNKLWQGLGYYR-RAKFLLETSKIIKKKYNYKLPSQYEDLIALPGIGDYT 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A ILS+AF IG+D ++ R+ RI G K+ + R+ K L+
Sbjct: 124 AKAILSIAFDKNEIGIDGNVERVVTRIFNISG--KKKILNYVERLKVEKKASFLMQGLME 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
G +CK + P C C ++ CK
Sbjct: 182 VGALICKPKLPLCNDCFLNKNCKY 205
>gi|292670502|ref|ZP_06603928.1| A/G-specific adenine glycosylase [Selenomonas noxia ATCC 43541]
gi|292647912|gb|EFF65884.1| A/G-specific adenine glycosylase [Selenomonas noxia ATCC 43541]
Length = 368
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 78/196 (39%), Gaps = 12/196 (6%)
Query: 37 PSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + +L + + + + ++ ++ Q+ V + T + A + L
Sbjct: 27 PDTR-DLPWRDEPTPYHVWISEIMLQQTRAAVVRAYYLRFLDALPTIADLAACDDDALMK 85
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+ +G Y ++ N+ + ++ E ++P + L LPGIGR A+ I S A+G P
Sbjct: 86 LWQGLGYYS-RARNLKRAAETIVREHKGQLPSDFDALLALPGIGRYTASAIASFAYGQPR 144
Query: 154 IGVDTHI-----FRISNRIGLAPGKTPNKVEQSLLRIIPPKH-QYNAHYWLVLHGRYVCK 207
VD + +N I +A + +E +L P + + G +C
Sbjct: 145 PAVDGNFLRVAARVTANGIDIAKDPSKRALEAALAPSYPTGRDAGYLNEAFMDLGATICL 204
Query: 208 AR-KPQCQSCIISNLC 222
P C +C + LC
Sbjct: 205 PNGAPLCHTCPAARLC 220
>gi|299135958|ref|ZP_07029142.1| iron-sulfur cluster loop [Acidobacterium sp. MP5ACTX8]
gi|298602082|gb|EFI58236.1| iron-sulfur cluster loop [Acidobacterium sp. MP5ACTX8]
Length = 261
Score = 84.2 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 96/248 (38%), Gaps = 22/248 (8%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEE---IFYLFSLKWPSPKGELYYVNHFTLIVAVLL 57
M++ ++ +P TP+E + I L + P + + T + LL
Sbjct: 1 MIAELFNEPADPATPQRRPLTPEEADRLPHIHRLLLGHYGQPAPREPW-DPLTQFIYSLL 59
Query: 58 SAQST----DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+ ++ + ++ + + +++ I + K+ + +
Sbjct: 60 AGRTKTPSAHQVMRDLERYFQAGPGNWESVRDATVAEIERAIAVVTFPEVKAPRLKAALM 119
Query: 114 ILINEF---------DNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRI 163
+ + + + L + G+G + + +++ + I +D + R+
Sbjct: 120 GITERYGSLTLDFLARYRTDKIRSWLEQFEGVGPQVSAAVVNFSTLRRRAISIDANHLRV 179
Query: 164 SNRIGLAPGKTPNKVEQSLLRIIP---PKHQYNAHYWLV-LHGRYVCKARKPQCQSCIIS 219
R+ + P E+ L+R++P + H+ LV LHG+ +C +P+C++C +
Sbjct: 180 VQRLCVVPRADAAITEERLMRLVPETWDAEMLDEHHSLVKLHGQTLCTFSEPRCEACPLL 239
Query: 220 NLCKRIKQ 227
++C K+
Sbjct: 240 DICPTGKR 247
>gi|288576358|ref|ZP_05978650.2| A/G-specific adenine glycosylase [Neisseria mucosa ATCC 25996]
gi|288565669|gb|EFC87229.1| A/G-specific adenine glycosylase [Neisseria mucosa ATCC 25996]
Length = 321
Score = 83.8 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V E T Q + A + ++ + +G Y ++ N+ + ++
Sbjct: 1 MLQQTQVATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYS-RARNLHKAARQVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
EFD P + L L G+GR A I + AF +D ++ R+ R+ G +
Sbjct: 60 EEFDGTFPSERKDLETLCGVGRSTAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQD 119
Query: 177 K-----VEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
K + ++PP+ L+ G VCK KP C C ++++C+ KQ
Sbjct: 120 KKFENSLWTLAESLLPPENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQ 177
>gi|219519404|gb|AAI45444.1| Nthl1 protein [Mus musculus]
Length = 280
Score = 83.8 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T + +L + L I +G +R K + I
Sbjct: 98 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYI 157
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ IL ++ IP ++ L LPG+G K A++ +++A+ I I VDTH+ RI+NR+
Sbjct: 158 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANRL 217
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + ++L +P + LV G+ +C P+CQ+C+ LC
Sbjct: 218 RWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNKALCPAA 277
Query: 226 K 226
+
Sbjct: 278 Q 278
>gi|256071646|ref|XP_002572150.1| endonuclease III [Schistosoma mansoni]
gi|238657303|emb|CAZ28381.1| endonuclease III, putative [Schistosoma mansoni]
Length = 260
Score = 83.8 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + PK ++++++LS+Q+ D + A + L T + ++
Sbjct: 57 ERLADETEHPKTF-----RLQVLISLMLSSQTKDQVTSAAMERLKLRGCTLTTLTSMKTG 111
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+LQ+ I +G Y+ K+ NI IL ++++ IP+T+E L LPG+G K A + + A+
Sbjct: 112 ELQDLIYPVGFYKTKALNIKKTCEILKEKYNSDIPETVEELCTLPGVGPKMAYLAMQCAW 171
Query: 150 GIPTIG-VDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
T VDTH+ RI NR+ P KTP + ++ P +H ++ LV G+ +C
Sbjct: 172 KKVTGIGVDTHVHRIVNRLKWCKKPTKTPEETRLAIEEWFPREHWDEINWLLVGFGQQIC 231
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
+ P C+ C+ ++C +
Sbjct: 232 RPVNPNCKECLNLSICPSASK 252
>gi|292656948|ref|YP_003536845.1| A/G-specific adenine glycosylase [Haloferax volcanii DS2]
gi|291372790|gb|ADE05017.1| A/G-specific adenine glycosylase [Haloferax volcanii DS2]
Length = 212
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLF 74
+ P++ + L + + + L + F +++A +L ++T +V+ A +
Sbjct: 1 MLNPQQ-SFVGPLLAWHEENGRHRLPWREPGRSAFEILIAEILLQRTTAASVSGAYLPIV 59
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+P+ ++A + ++ I +G+ K++E I S LI +P+ L L
Sbjct: 60 ARYPSPETVVAASPEAIERRIAPLGL-AKRAEFIRRTSQQLIARHSGDVPRRYADLLELH 118
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+G A +L AF VDT++ R+ +R P + + + P + +
Sbjct: 119 GVGDYTARSVLIHAFDEDIAAVDTNVRRLISRFFDLPPDSEVLPHLAD-ALAPSRRGSDF 177
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ ++ VC AR PQC++C C+
Sbjct: 178 QHAMLDFAADVCTARTPQCETCPFGEHCRS 207
>gi|322500557|emb|CBZ35634.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 501
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 22/198 (11%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS- 105
+ + + V+ ++S Q+ V + + + + A E ++++ +G YR+
Sbjct: 79 DPYQVWVSEVMSQQTRMETVIPYYAAWMKKFPSIEALAASTEDEVKSVWAGMGYYRRAMY 138
Query: 106 -----ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ ++ +P + E L ++PGIG + I SM FG P VD ++
Sbjct: 139 LRKGAKYLLERPKEREATATACMPSSQEELLKVPGIGPYTSAAIASMCFGEPVCSVDGNV 198
Query: 161 FRISNRIGLAPGKTP------NKVEQSLLRI---------IPPKHQYNAHYWLVLHGRYV 205
R+ +R+ P + ++ + + + L+ G V
Sbjct: 199 IRVLSRLRGERDFDPKVPANVKEAAAWGQQLMGNSPTTSAVVCQDPSALNQGLMELGASV 258
Query: 206 CKAR-KPQCQSCIISNLC 222
C+ P C SC + C
Sbjct: 259 CRPSGAPLCTSCPLQRFC 276
>gi|315452597|ref|YP_004072867.1| A/G-specific adenine glycosylase [Helicobacter felis ATCC 49179]
gi|315131649|emb|CBY82277.1| A/G-specific adenine glycosylase [Helicobacter felis ATCC 49179]
Length = 331
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 11/215 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPS------PKGELYYVN-HFTLIVAVLLSAQSTDVNVNKATK 71
+ + + P L+ N + + ++ ++S Q+ V +
Sbjct: 1 MSDSNKENRAHEALLEWYECCGRKDMPIRHLHGPNAPYEVYISEIMSQQTQIGVVLERFF 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
F K LA+ + Y +++N+ + I + +P+ + L
Sbjct: 61 DPFLKVFPTLKALALAPLDQVLLLWKGLGYYTRAKNLHKSAQICAQLYGGNLPKDYKLLR 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP---NKVEQSLLRIIPP 188
LPG+G A +L F VD ++ R+ R K + ++ +
Sbjct: 121 ALPGVGDYSARAVLCFGFKEGVGVVDANVARVLLRFFAITPKQKGLASLLQSKADAWLNT 180
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ ++ + L+ G VC + PQC C +S C+
Sbjct: 181 NNPFDHNQALIDLGALVCT-KTPQCHLCPLSFACQ 214
>gi|332240056|ref|XP_003269206.1| PREDICTED: endonuclease III-like protein 1-like [Nomascus
leucogenys]
Length = 312
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRIKVKYI 189
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
S IL + IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 190 KQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGSVSGIAVDTHVHRIANRL 249
Query: 168 GLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + +L +P + + + LV G+ C +P+CQ+C+ LC
Sbjct: 250 RWTKKATKSPEETRVALEEWLPRELWHEINGLLVGFGQQTCLPVRPRCQACLNQALCPAA 309
Query: 226 K 226
+
Sbjct: 310 Q 310
>gi|293324783|emb|CBK55599.1| C. elegans protein R10E4.5b, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 224
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+LS+Q+ D A K L + + K+L L+ + +G Y++K+ + + IL
Sbjct: 1 MLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYLQKTAKIL 60
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKT 174
++F IP +L+GL LPG+G K AN+++ +A+G VDTH+ RISNR+G T
Sbjct: 61 KDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRLGWIKTST 120
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P K +++L ++P ++ LV G+ C+ +P+C +C+ C
Sbjct: 121 PEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPS 170
>gi|146304857|ref|YP_001192173.1| DNA-(apurinic or apyrimidinic site) lyase [Metallosphaera sedula
DSM 5348]
gi|145703107|gb|ABP96249.1| DNA-(apurinic or apyrimidinic site) lyase [Metallosphaera sedula
DSM 5348]
Length = 230
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 19/218 (8%)
Query: 26 EEIFYLFSLKWP-------SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+EI + + + + F +++A +L+ +TD KA + L +
Sbjct: 6 KEIVSRLDRAYKIKSEDFLAIEIWEKTRDPFKVLIATILTQNTTDKGAKKAYEELDKEVG 65
Query: 79 TPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKI--------PQTLEG 129
+ L+ + + ++ IR +G++ K++ I +S ++NE+ I P+ E
Sbjct: 66 ITAEGLSRADPEVIKRCIRKVGLHNNKTKVIKEVSTKILNEYGGDINKVLDLGLPKAREK 125
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L LPG+G+K A+V+L P +DTHIFRIS R+G+ S R +
Sbjct: 126 LVELPGVGKKTADVLLITCRDYPVFPIDTHIFRISKRLGIDGNYDKVS---SFWREVSDN 182
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ AH L+ HGR CKA KP+C +C++++ C+ +
Sbjct: 183 LRLRAHLLLITHGRATCKAIKPKCDTCVLNDCCEYYAR 220
>gi|227831027|ref|YP_002832807.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
L.S.2.15]
gi|284998523|ref|YP_003420291.1| HhH-GPD family protein [Sulfolobus islandicus L.D.8.5]
gi|227457475|gb|ACP36162.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
L.S.2.15]
gi|284446419|gb|ADB87921.1| HhH-GPD family protein [Sulfolobus islandicus L.D.8.5]
Length = 233
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQK 82
+L I+ + + + L N F ++VA +LS STD + KA L + TP+K
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT------LEGLTRLPGI 136
+ ++N ++ G+Y+ K++ + +S I++ +++ I E L + GI
Sbjct: 71 LSDADLSDIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR CKARKP C SCII C+
Sbjct: 191 HLLIAHGRQTCKARKPLCNSCIIKECCEYY 220
>gi|146092293|ref|XP_001470255.1| A/G-specific adenine glycosylase [Leishmania infantum]
gi|134085049|emb|CAM69450.1| putative A/G-specific adenine glycosylase [Leishmania infantum
JPCM5]
Length = 501
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 22/198 (11%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS- 105
+ + + V+ ++S Q+ V + + + + A E ++++ +G YR+
Sbjct: 79 DPYQVWVSEVMSQQTRMETVIPYYAAWMKKFPSIEALAASTEDEVKSVWAGMGYYRRAMY 138
Query: 106 -----ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ ++ S +P + E L ++PGIG + I SM FG P VD ++
Sbjct: 139 LRKGAKYLLERSKEREATATACMPSSQEELLKVPGIGPYTSAAIASMCFGEPVCSVDGNV 198
Query: 161 FRISNRIGLAPGKTP------NKVEQSLLRI---------IPPKHQYNAHYWLVLHGRYV 205
R+ +R+ P + ++ + + + L+ G V
Sbjct: 199 IRVLSRLRGERDFDPKVPANVKEAAAWGQQLMGNSPTTSAVVCQDPSALNQGLMELGASV 258
Query: 206 CKAR-KPQCQSCIISNLC 222
C+ P C SC + C
Sbjct: 259 CRPSGAPLCTSCPLQRFC 276
>gi|312797350|ref|YP_004030272.1| A/G-specific adenine DNA glycosylase [Burkholderia rhizoxinica HKI
454]
gi|312169125|emb|CBW76128.1| A/G-specific adenine DNA glycosylase (EC 3.2.2.-) [Burkholderia
rhizoxinica HKI 454]
Length = 358
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 33/209 (15%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V + A + +G Y ++
Sbjct: 7 RDPYRVWLSEIMLQQTQVSTVIPYYSRFLARFPHVHALAAAAADDVMALWSGLGYYT-RA 65
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + +++ ++ PQT+E L LPGIGR A I + +FG+ + +D ++ R+
Sbjct: 66 RNLHRCAQVVVQQYGGAFPQTVEQLAALPGIGRSTAAAIAAFSFGVRSPILDGNVKRVLA 125
Query: 166 RIGLAPGKTPNK-VEQSLLRI----IPPKHQYN--------------------------- 193
RI G +K VE ++ + +P +
Sbjct: 126 RIFGIDGFPGDKRVETAMWALAESLLPADEVSDEASGEASNDASGDVRQRDGAPVEPIVA 185
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
L+ G +C +P C C ++ C
Sbjct: 186 YTQGLMDLGATLCVRSRPDCGRCPFAHAC 214
>gi|295395516|ref|ZP_06805710.1| endonuclease III [Brevibacterium mcbrellneri ATCC 49030]
gi|294971535|gb|EFG47416.1| endonuclease III [Brevibacterium mcbrellneri ATCC 49030]
Length = 169
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 82/143 (57%)
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ ++ IR G +R K+ NII+L+ L++ +D ++P+T + L +LPG+G K ANV+
Sbjct: 1 MATREDVEAIIRPTGFFRSKAANIIALAVQLVDLYDGEVPRTQKELVKLPGVGVKTANVV 60
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
L AF P + VDTH+ R++ R+G P KVE L + P+ + L+ GR
Sbjct: 61 LGNAFDTPGLTVDTHVGRLARRMGFTKHTDPLKVEVDLQDLYDPRDLTLVSHRLIFMGRR 120
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
+C AR+P C +C I+ LC +
Sbjct: 121 ICHARRPACGACPIARLCPSYGE 143
>gi|238061430|ref|ZP_04606139.1| HhH-GPD family protein [Micromonospora sp. ATCC 39149]
gi|237883241|gb|EEP72069.1| HhH-GPD family protein [Micromonospora sp. ATCC 39149]
Length = 310
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 11/200 (5%)
Query: 33 SLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
S + +L + + ++V+ ++ Q+ V V A + TP + A
Sbjct: 16 SRWYEQNARDLPWRVTGVGAWAILVSEVMLQQTPVVRVLPAFQAWLARWPTPAALAADTP 75
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +G R+ + + ++ ++P L+ L LPG+G A + + A
Sbjct: 76 AEAIRMWGRLGYPRRAMR-LRECAVAIVERHGGEVPDRLDQLLALPGVGTYTARAVAAFA 134
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW------LVLHG 202
+G VDT++ R+ R + L + G
Sbjct: 135 YGQRHPVVDTNVRRVVCRAIAGEPDAGPATRPADLVATEELLPAEPAAAALASAAFMELG 194
Query: 203 RYVCKARKPQCQSCIISNLC 222
+C AR P+C +C + ++C
Sbjct: 195 AVICTARSPRCAACPVESVC 214
>gi|223944629|gb|ACN26398.1| unknown [Zea mays]
Length = 320
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 8/174 (4%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + T + + A ++++ +G YR+ + I+
Sbjct: 1 MLQQTRVPVVVAYYERWMARWPTVRSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIIE 60
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-- 174
L + GIG A I S+AF VD ++ R+ +R+
Sbjct: 61 KGLFPCTALA---LREVRGIGDYTAGAIASIAFNEVVPVVDGNVIRVISRLYTIADNPKE 117
Query: 175 ---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + +++ P + + ++ G +C KP C C +S+ C+ +
Sbjct: 118 SSTVKRFWDLVGQMVDPLRPGDFNQAMMELGATLCSKTKPGCSQCPVSSHCQAL 171
>gi|294658207|ref|XP_460548.2| DEHA2F04180p [Debaryomyces hansenii CBS767]
gi|202952958|emb|CAG88864.2| DEHA2F04180p [Debaryomyces hansenii]
Length = 375
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK--------MLAIGEKKLQNYIRTIGI 100
F L+++++LS+Q+ D +A ++L ++ + E ++ +I +G
Sbjct: 152 FQLLISLMLSSQTKDEVNFQAMRNLHSGLMALGHKDGLSLESIVTLSEGEIDAFISKVGF 211
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+RKK+ I IL + FD+ IP+ + + LPG+G K ++L + I VD H
Sbjct: 212 HRKKAAYIKKACAILQSNFDSDIPKNITDIVTLPGVGPKMGFLLLQRGWNINDGIGVDVH 271
Query: 160 IFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI- 217
I R++ G A + P L +P K + + LV G+ +C + C C
Sbjct: 272 IHRLAQMWGWVAKSEKPESTRTELESWLPKKFWGDINPLLVGFGQVICVPKASNCDICTL 331
Query: 218 -ISNLCKRIKQ 227
I+ LCK +
Sbjct: 332 GINKLCKSSNK 342
>gi|148690399|gb|EDL22346.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_a [Mus
musculus]
Length = 277
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T + +L + L I +G +R K + I
Sbjct: 95 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYI 154
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ IL ++ IP ++ L LPG+G K A++ +++A+ I I VDTH+ RI+NR+
Sbjct: 155 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANRL 214
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
KTP + ++L +P + LV G+ +C P+CQ+C+ LC
Sbjct: 215 RWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNKALCPAA 274
Query: 226 K 226
+
Sbjct: 275 Q 275
>gi|229585498|ref|YP_002844000.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.16.27]
gi|228020548|gb|ACP55955.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.16.27]
Length = 233
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQK 82
+L I+ + + + L N F ++VA +LS STD + KA L + TP+K
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT------LEGLTRLPGI 136
+ ++N ++ G+Y+ K++ + +S I++ +++ I E L + GI
Sbjct: 71 LSDANLSDIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR CKARKP C SCII C+
Sbjct: 191 HLLIAHGRQTCKARKPLCNSCIIKECCEYY 220
>gi|227828269|ref|YP_002830049.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.14.25]
gi|229579909|ref|YP_002838308.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
Y.G.57.14]
gi|238620462|ref|YP_002915288.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.16.4]
gi|227460065|gb|ACP38751.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.14.25]
gi|228010624|gb|ACP46386.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
Y.G.57.14]
gi|238381532|gb|ACR42620.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
M.16.4]
Length = 233
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQK 82
+L I+ + + + L N F ++VA +LS STD + KA L + TP+K
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT------LEGLTRLPGI 136
+ ++N ++ G+Y+ K++ + +S I++ +++ I E L + GI
Sbjct: 71 LSDADLSDIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR CKARKP C SCII C+
Sbjct: 191 HLLIAHGRQTCKARKPLCNSCIIKECCEYY 220
>gi|172041361|ref|YP_001801075.1| putative A/G-specific DNA glycosylase [Corynebacterium urealyticum
DSM 7109]
gi|171852665|emb|CAQ05641.1| putative A/G-specific DNA glycosylase [Corynebacterium urealyticum
DSM 7109]
Length = 327
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 30/224 (13%)
Query: 28 IFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ + + +L + + + ++V+ ++S Q+ V + + TP +
Sbjct: 18 LISALNHWFARNARDLPWRHIGTSPWAILVSEVMSQQTPVTRVAPRWQAWLQRWPTPAAL 77
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G R+ + + ++ F ++P ++ L LPG+G A
Sbjct: 78 ATAATADVIREWGNLGYPRRALR-LQECAQACVDRFGGELPSSVAELESLPGVGSYTARA 136
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS------LLRIIPPK-------- 189
+ + AF VDT++ R+ +R + ++ +
Sbjct: 137 VAAYAFEQAVPVVDTNVRRVCHRAAHGNFLQGPARSRDLADVADMMPWVDHDPALDRRGY 196
Query: 190 -------HQYNAHYWL----VLHGRYVCKARKPQCQSCIISNLC 222
+A + + G +C+AR PQC+ C I+ C
Sbjct: 197 RNAGHDRDHRDAALLMTASLMELGSLICQARTPQCELCPIAARC 240
>gi|159128662|gb|EDP53776.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 432
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 47/270 (17%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYVN------HF 49
V ++K G+ + + + + P+ ELY+ + F
Sbjct: 126 VPARKIKGENGSIKIEPPSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRF 185
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG---------------------- 87
++A++LS+Q+ D A + L + +
Sbjct: 186 QTLIALMLSSQTKDTVTAVAMQRLHTELGNGRALAEDPIVKKEEQEDIDLKSSQPLKDST 245
Query: 88 ----------EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+KL IRT+G + K++ I + + IL +++++ IP T E L +LPG+G
Sbjct: 246 LNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVG 305
Query: 138 RKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A + +S A+G VD H+ RI+N G KTP + +L +P + +
Sbjct: 306 PKMAYLCMSAAWGKDEGIGVDVHVHRITNLWGWHKTKTPEETRMALESWLPRDKWHEINK 365
Query: 197 WLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
LV G+ VC +C C ++ LCK
Sbjct: 366 LLVGLGQTVCLPVGRRCGECDLAGTKLCKS 395
>gi|260801749|ref|XP_002595758.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
gi|229281005|gb|EEN51770.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
Length = 239
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++++LS+Q+ D + A K L + T +L ++KL I +G ++ K + I
Sbjct: 45 YHALISLMLSSQTKDQMTSAAMKRLIDHGLTVDNILKTSDQKLGELIYPVGFWKTKVKYI 104
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + IL +++ IP T+ + +LPG+G K A + + + +G I VDTH+ RISNR+
Sbjct: 105 KNTTQILKDQYGGDIPATVAEMVKLPGVGPKMAYLTMDVGWGKVEGICVDTHVHRISNRL 164
Query: 168 GL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
G P K P +L +P +H ++ LV G+ C P+C C+ +C
Sbjct: 165 GWLKKPTKVPEDTRVALEEWLPREHWSELNWLLVGFGQQTCLPVSPKCSGCLNKEICPFG 224
Query: 226 K 226
K
Sbjct: 225 K 225
>gi|71020263|ref|XP_760362.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
gi|46099986|gb|EAK85219.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
Length = 516
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKSENI 108
+V+++LS+Q+ D +A +L + ++ + + I +G +R+K+ +
Sbjct: 287 LVSLMLSSQTKDPVTAEAVYNLQRTLPNGLCLQSLLDADNEMISQCISKVGFWRRKTGYL 346
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
S + IL ++F +P+T++ L LPG+G K A + LS IGVDTH+ R++NR+G
Sbjct: 347 KSAARILADDFQGDVPRTVDELVSLPGVGPKMAFLALSSMGIQVGIGVDTHVHRLTNRLG 406
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--SNLCKRIK 226
KTP + +L +P + N + LV G+ +C P+C C + + LC +
Sbjct: 407 WHKTKTPEETRLNLQSWLPTQLHANINRLLVGFGQVICVPVGPRCDLCDVGRAGLCPSFR 466
Query: 227 Q 227
+
Sbjct: 467 K 467
>gi|145524629|ref|XP_001448142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415675|emb|CAK80745.1| unnamed protein product [Paramecium tetraurelia]
Length = 278
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++ +++LS Q+ D +K L E + + E L I + K++ I
Sbjct: 99 FQILTSLMLSPQTKDDVTSKCANRLLEYT--INDIANMDEPDLIKLIYEVNFNVTKAKRI 156
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
L+ + I + P+T E ++ G+G K A + + +AF I +D ++ RI NR+
Sbjct: 157 KDLAQLAIYKGM---PKTFEETIKIKGVGEKIALLYIQVAFQRVEGIPIDVNMIRICNRV 213
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ K+P K+ + L K + LV G+ +C KP+C C + ++C+ K
Sbjct: 214 PIFKEKSPTKLRKFLESQFEHKEWGEINETLVGFGQQICLP-KPKCDQCKLKDICEYYK 271
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS) [Ostreococcus tauri]
Length = 820
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + + +LS+Q+ D + A + L TP+ +L E L I +G +R+K++ +
Sbjct: 316 YLTLTSAMLSSQTKDEINHAAMRRLRAHGCTPENILNTDEDALDAMINPVGFHRRKAQYL 375
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + IL++E+D IP ++E L LPG+G K A +++++ +G PT I VD H+ RIS R+
Sbjct: 376 RATAKILLDEYDGDIPPSVETLCALPGVGPKMAYLVMNVGWGEPTGICVDVHVHRISERL 435
Query: 168 GLA-----------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
G KTP +L +P + LV G+ C +P+C +C
Sbjct: 436 GWVAKDVMGKNGSPRKKTPEDTRAALESWLPKHEWIEINPLLVGFGQLTCTPLRPKCHAC 495
Query: 217 IISNL--CKR-IKQ 227
++ C K+
Sbjct: 496 PLAKDGSCPSAFKE 509
>gi|260911265|ref|ZP_05917866.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 472
str. F0295]
gi|260634638|gb|EEX52727.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 472
str. F0295]
Length = 403
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 28/221 (12%)
Query: 32 FSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ L + + + + ++ ++ Q+ + T + A E
Sbjct: 11 LLHWFQHHGRSLPWRETKDPYAIWLSEVILQQTRVSQGLAYWQRFMHNYPTVNALAAATE 70
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
++ + +G Y + + I+ P T + +++L G+G A I S+A
Sbjct: 71 DEVLRLWQGLGYYSRARNLHQAAKQIVEL---GYFPNTHDAISKLKGVGPYTAAAIASIA 127
Query: 149 FGIPTIGVDTHIFRISNRIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
F +P VD +++R+ R + + + ++P + ++ G
Sbjct: 128 FNLPVAVVDGNVYRVLARFFGIDTPINSTEGKKQFATLAQSLLPHHAPARFNEAIMDFGA 187
Query: 204 YVCKARK----------------PQ-CQSCIISNLCKRIKQ 227
C K P C C ++ C Q
Sbjct: 188 LQCLPVKGETTKTNNNIATTNESPAFCNDCPLNGQCVAYAQ 228
>gi|157787119|ref|NP_001099198.1| endonuclease III-like protein 1 [Rattus norvegicus]
gi|149052032|gb|EDM03849.1| nth (endonuclease III)-like 1 (E.coli) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 300
Score = 83.0 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T + +L + L I +G +R K + I
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDLLGRLIYPVGFWRSKVKFI 177
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ IL ++ IP ++ L LPG+G K A++ +++A+ + I VDTH+ RI+NR+
Sbjct: 178 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRL 237
Query: 168 GLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K+P + ++L +P + LV G+ +C P+CQ+C+ LC
Sbjct: 238 KWTKKMTKSPEETRRNLEEWLPRVLWSEINGLLVGFGQQICLPVHPRCQACLNKALCPAA 297
Query: 226 K 226
+
Sbjct: 298 Q 298
>gi|126458694|ref|YP_001054972.1| HhH-GPD family protein [Pyrobaculum calidifontis JCM 11548]
gi|126248415|gb|ABO07506.1| HhH-GPD family protein [Pyrobaculum calidifontis JCM 11548]
Length = 219
Score = 83.0 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
N F + VAV+LS ++D N KA L TP+ +L + E +L I+ G+YR +
Sbjct: 32 NLFEMAVAVVLSQNTSDRNAFKAYDQLKRRLGEITPEAVLQLSEDELAELIKPAGMYRIR 91
Query: 105 SENIISLSHILINEFDNKIPQTLE-------GLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+ NI +L+ I L LPG+G K A+VIL + G+P VD
Sbjct: 92 ARNIRALADAFIRHKVTPEKLREMGPVEARKFLLSLPGVGEKTADVIL-VNLGLPAFPVD 150
Query: 158 THIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
THI RI+ R G+ ++ + + +PP+ H L+ GR +C AR P+C C
Sbjct: 151 THIRRIAKRWGIVGNHG--EISRRFMEAVPPEKYLEVHLKLIQFGRDICTARAPKCHICP 208
Query: 218 ISNLCKRI 225
I + C
Sbjct: 209 IGSKCPSY 216
>gi|37360941|dbj|BAC98379.1| mutY homolog beta [Mus musculus]
Length = 454
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 5/179 (2%)
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+V ++ T Q + + +++ +G Y +
Sbjct: 43 SVTSLGETWQKKRPTRTGGPMLKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARK 102
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
++ + LPG+GR A I S+AF T VD ++ R+ R+
Sbjct: 103 VVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGAD 162
Query: 174 T-----PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 163 PTSTLVSHHLWNLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 221
>gi|159900799|ref|YP_001547046.1| HhH-GPD family protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893838|gb|ABX06918.1| HhH-GPD family protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 224
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ + ++ + + +++ +LS Q+T+ N + ++L T +
Sbjct: 5 QAKADLVYRELVALHGFNQL-VPRREPMHELISTMLSHQTTEANEERGYQNLRATFPTWE 63
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTR 132
+LA + + I+ K+ NI + ++ E + LT
Sbjct: 64 AILAAPVEAVAEAIKPANYAPAKANNIQAALAKILAERGEISIDFLAELSTEAAMAWLTG 123
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KH 190
L G+G K A+++L F P + VDTH+ R+S R+GL KTP + + L +++P +
Sbjct: 124 LRGVGPKTASLVLLFCFSKPILPVDTHVHRVSQRLGLVKAKTPTEAHEILWQLLPHDAEW 183
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+N H L+ HG+ +C A++P+C C ++ C +
Sbjct: 184 LFNYHVALLRHGQRICLAKRPRCNQCPLTAQCLWYQ 219
>gi|225433860|ref|XP_002264475.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 376
Score = 82.7 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK-KLQNYIRTIGIYRKKSEN 107
F ++V+ LLS+Q+ D + A + L + + ++ +++ I +G Y +K+ N
Sbjct: 171 FAVLVSSLLSSQTKDNVTHGAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRKAGN 230
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNR 166
+ ++ I + ++D IP +LE L LPGIG K A++++++ + I VDTH+ RI NR
Sbjct: 231 LKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNR 290
Query: 167 IGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+G P + +SL +P + + LV G+ +C +P+C C +S
Sbjct: 291 LGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINPLLVGFGQTICTPLRPRCGVCGVS 350
Query: 220 NLCKR-IKQ 227
+LC K+
Sbjct: 351 DLCPSAFKE 359
>gi|121711106|ref|XP_001273169.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
gi|119401319|gb|EAW11743.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
Length = 421
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 56/280 (20%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEI------------FYLFSLKWPSPKGE------ 42
+V ++ G +P + L EI P+ +
Sbjct: 105 VVKTEPPAKKTGRAPARKIKNEDGLIEIEPPSNWETMYTMVKKMREDNPTAPVDTMGCAN 164
Query: 43 LYYV--NH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ--------------- 81
L++ + F ++A++LS+Q+ D A + L
Sbjct: 165 LHWRASSPRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDSNVHQDLIIKKEELEDE 224
Query: 82 --------------KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
+LA+ KL IRT+G + K++ I + + I+ +++ + IP +
Sbjct: 225 DSKIPERDSTLNLENILAVSPAKLNELIRTVGFHNNKTKYIKATAEIIRDQYKSDIPSSA 284
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L +LPG+G K A + +S A+G VD H+ RI+N G KTP + +L +
Sbjct: 285 TELMKLPGVGPKMAFLCMSAAWGKDEGIGVDVHVHRITNLWGWHKTKTPEETRMALESWL 344
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
P + + + LV G+ VC +C C ++ LCK
Sbjct: 345 PREKWHEINKLLVGLGQTVCLPVGRRCGECDLAGTKLCKS 384
>gi|323475340|gb|ADX85946.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
REY15A]
Length = 233
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK- 82
+L I+ + + + L N F ++VA +LS STD + KA L + +
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 ------MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
K+ +T K II + + + E L + GI
Sbjct: 71 LSDADLSNIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ L+ HGR CKARKP C SCII C+
Sbjct: 191 HLLIAHGRQTCKARKPLCNSCIIKECCEYY 220
>gi|262341300|ref|YP_003284155.1| A/G-specific adenine glycosylase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272637|gb|ACY40545.1| A/G-specific adenine glycosylase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 345
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 12/206 (5%)
Query: 30 YLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTD-VNVNKATKHLFEIADTPQKMLA 85
+ +L + N + ++V+ + Q+ K + + +K+
Sbjct: 5 KKIINWYKKNHRKLPWRETQNPYYILVSEFILQQTRISKTTIKYYSNFIKKFPDLEKLAQ 64
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
EK + +G Y + S + +N P+ + L + GIG I
Sbjct: 65 AEEKNVLKEWEGLGYYSRARNLH---SFAKELKKNNIFPKKYKELIKYKGIGPYTGAAIA 121
Query: 146 SMAFGIPTIGVDTHIFRISNRI-----GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
S+ F VD + +R+ +R + T N +L+++ K+ + ++
Sbjct: 122 SICFNEVIPAVDGNAYRVFSRYLGIYDDITSTATKNMFRILILKMMDYKYPGIFNQAIMD 181
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
G +C + +C C + + C IK
Sbjct: 182 IGSVLCTPKNAKCFLCPVKDSCFSIK 207
>gi|242017392|ref|XP_002429173.1| endonuclease III, putative [Pediculus humanus corporis]
gi|212514051|gb|EEB16435.1| endonuclease III, putative [Pediculus humanus corporis]
Length = 292
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD--TPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
F +V+++LS+Q+ D A + L T + ++ + + L I +G +++K++
Sbjct: 107 FHALVSLMLSSQTKDQVTFAAMQRLKNYKTGLTIESIIEMSDDTLGELIYPVGFWKQKTK 166
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISN 165
+ +L +FD IP T+E L LPG+G K A++ + A+ + + VDTH+ RI+N
Sbjct: 167 YLKQTCQVLKEKFDGDIPNTVELLCSLPGVGLKMAHICMKTAWDVISGIGVDTHVHRIAN 226
Query: 166 RIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
RIG KTP + SL +P + + LV G+ +CK KP C SC C
Sbjct: 227 RIGWVHKPTKTPEETRISLESWLPKELWEEINNLLVGFGQQICKPTKPLCNSCKNQPFCP 286
Query: 224 RIK 226
K
Sbjct: 287 YAK 289
>gi|328850745|gb|EGF99906.1| hypothetical protein MELLADRAFT_29450 [Melampsora larici-populina
98AG31]
Length = 139
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 5/138 (3%)
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
+G Y + S + ++ + +++ GIG A I S+A+ P
Sbjct: 1 FVGLGYYSRASRLLSGAKKVVQDFGGILPDDPSIMESQVDGIGPYSAGAIASIAYNKPAA 60
Query: 155 GVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
+D ++ R+ R+ +K + ++P + + L+ G +CK R
Sbjct: 61 MIDGNVHRVLTRLTAFHSTQTSKSTINFLWSVAQSVVPNHRPGDFNQALMELGATICKPR 120
Query: 210 KPQCQSCIISNLCKRIKQ 227
+C C ++ CK ++
Sbjct: 121 ASKCGECPLTGWCKAYQE 138
>gi|328354254|emb|CCA40651.1| endonuclease III [Pichia pastoris CBS 7435]
Length = 731
Score = 82.7 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD--------TPQKMLAIGEKKLQNYIRTIGI 100
+ L+V+++LS+Q+ D + K + + Q +L + KL I IG
Sbjct: 503 YRLLVSLMLSSQTKDEVNYEVMKSMNDYFKSVGYENGLCLQAILDVEPTKLDELIHKIGF 562
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+ +K+ + S + I+ +F+ IP+ ++ +T LPG+G K ++L A+GI VD H
Sbjct: 563 HNRKTVYLKSAAVIVKEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIGVDVH 622
Query: 160 IFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII- 218
+ R++N KTP + +L + +P + + LV G+ +C R +C C +
Sbjct: 623 VDRLANMWKWVNTKTPEQTRLALEKWVPRELWQEINPVLVGFGQVICTPRGRRCDVCSLA 682
Query: 219 -SNLC 222
LC
Sbjct: 683 SKKLC 687
>gi|145603496|ref|XP_369450.2| hypothetical protein MGG_06014 [Magnaporthe oryzae 70-15]
gi|145011711|gb|EDJ96367.1| hypothetical protein MGG_06014 [Magnaporthe oryzae 70-15]
Length = 449
Score = 82.3 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ----------KMLAIGEKKLQNYIRTI 98
F +VA++LS+Q+ D A L + + +LA+ L I +
Sbjct: 176 FHTLVALMLSSQTKDTVNAVAMARLKKELPPFEEGAPPGLNLENVLAVEPALLNELIWQV 235
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL---SMAFGIPTIG 155
G + K++ I + IL +++++ IP T+ GLT LPG+G K A++ + + + IG
Sbjct: 236 GFHNNKTKYIKQAAVILRDKYNSDIPDTIAGLTSLPGVGPKMAHLCMSAPNGWNRVEGIG 295
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
VD H+ RI+N G P +L +P ++ LV G+ VC +C
Sbjct: 296 VDVHVHRITNLWGWNKTNNPEATRAALESWLPRDRWREINWLLVGLGQTVCLPVGRKCGD 355
Query: 216 CI--ISNLCKR 224
C + LC+
Sbjct: 356 CELGLRGLCRA 366
>gi|23098497|ref|NP_691963.1| DNA-lyase [Oceanobacillus iheyensis HTE831]
gi|22776723|dbj|BAC12998.1| DNA-(apurinic or apyrimidinic site) lyase [Oceanobacillus iheyensis
HTE831]
Length = 222
Score = 82.3 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 82/214 (38%), Gaps = 11/214 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI+Y + P+ + +++ +L ++ NV KA L +
Sbjct: 1 MNIPDYLEIYYKLYKYYG-PQSWWPARSTLEMLLGSILVQRTNWRNVEKALTRLGDHVHD 59
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG-------LTR 132
I E +L IR G YR K+ I + + L
Sbjct: 60 ADYFYQIEENELAEKIRPSGFYRIKAARIKAFITWFRKYNYDVSIVQQIPHDKLRSELLS 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--H 190
+ GIG + A+V+L AF D + RI NRIGL T +++ + R +P
Sbjct: 120 IKGIGDETADVMLVYAFKKQAFIADQYANRIFNRIGLNVPSTYRSLQKVVERDLPNDSLL 179
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H LV H + CK KP C +C + +C+
Sbjct: 180 YQEYHALLVEHAKIHCK-VKPICNTCPVQTICEF 212
>gi|315605724|ref|ZP_07880756.1| A/G-specific adenine glycosylase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312422|gb|EFU60507.1| A/G-specific adenine glycosylase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 307
Score = 82.3 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 83/222 (37%), Gaps = 15/222 (6%)
Query: 19 LYTPKEL---EEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATK 71
++T + + + + + + + +L + + +V ++S Q+ V
Sbjct: 1 MFTKPTIDASQALLHDLPRWFATHRRDLPMRRDDVSDWGTLVFEIMSQQTPITRVQPIWI 60
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ TP + + +G + + S + ++ + D ++P T++ LT
Sbjct: 61 EWMQRWPTPADLARASSADIIVAWANLGYPSRALR-LKSCAATIVAKHDGEVPLTMKELT 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----RII 186
LPG+G A+ +L+ G+ +DT++ R+ R P+ ++
Sbjct: 120 LLPGVGTYTASALLAFRHGVRIPVLDTNVRRVLVRFLDGREFPPHATPSKRETTRADELL 179
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P + L+ G VC P C C++ C +
Sbjct: 180 PADGHQAADVSLALMEFGALVCTQLTPSCDDCLLRPTCAWAR 221
>gi|289620475|emb|CBI53048.1| unnamed protein product [Sordaria macrospora]
Length = 693
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 75/223 (33%), Gaps = 32/223 (14%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
P E + ++++ + Q+ V I T Q + A + +
Sbjct: 202 PDDLREAVAQRAYEVLLSETMLQQTRVAPVIAYYSKWLAILPTMQSLAASNPATVLSLWS 261
Query: 97 TIGIYRKKSE----NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+G Y + + + +D +P T+E L +LPG+GR A + + +G
Sbjct: 262 GLGYYSRATRLQTLAQQVCPPLEQGGYDGLLPHTVEKLMQLPGVGRYTAGAVACIVYGRA 321
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPP------------------- 188
VD ++ R+ R G +K + ++ R++
Sbjct: 322 EPMVDGNVIRVLARQLGIRGDVKSKEVLKVMWEAAKRLVEAVAWDGTDATDEERKGKEPP 381
Query: 189 --KHQYNAHYWLVLHGRYVCKA--RKPQCQSCIISNLCKRIKQ 227
L+ G VC KP+C C I C+ ++
Sbjct: 382 VSDRPGKWGQGLMELGATVCLGGLAKPKCGLCPIKGTCRAYQE 424
>gi|170584526|ref|XP_001897050.1| Endonuclease III-like protein 1 [Brugia malayi]
gi|158595585|gb|EDP34128.1| Endonuclease III-like protein 1, putative [Brugia malayi]
Length = 261
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++++LS+Q+ D A L E T ++ I +KLQ + +G Y+KK+ I
Sbjct: 78 FQTLLSLMLSSQTKDHITAAAMHRLREHGCTVDDLVLIPTEKLQQLLIPVGFYKKKAVYI 137
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRI 167
++ IL +D IP T+EGL LPG+G K A + + A+ +GVDTH+ RISNR+
Sbjct: 138 KKVAEILKERYDGDIPNTVEGLCSLPGVGEKMAYLTMCTAWNQLEGLGVDTHVHRISNRL 197
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
G P + +L ++P + + LV G+ C P+C C+ N+C
Sbjct: 198 GWIKTSNPKESRMALEALVPREQWQELNKLLVGFGQQTCLPVLPKCSECLNKNIC 252
>gi|156098791|ref|XP_001615411.1| A/G-specific adenine glycosylase [Plasmodium vivax SaI-1]
gi|148804285|gb|EDL45684.1| A/G-specific adenine glycosylase, putative [Plasmodium vivax]
Length = 613
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 78/199 (39%), Gaps = 11/199 (5%)
Query: 38 SPKGELYYVNH--FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI 95
P E +++ + + V+ ++ Q+ V T ++ ++
Sbjct: 176 WPPSEKQHLSVRGYQIYVSEIMLQQTRVHTVVSFYLKWMNKWGTIFELAKSNLDEVLIVW 235
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+ +G Y +++N++ ++ ++D P L+ L LPGIG + I + I
Sbjct: 236 KGLGYYN-RAKNLLDCCKHVVEKYDGVFPNDLKLLKELPGIGEYTSKAICIHLYNRKDIC 294
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRII------PPKHQYNAHYWLVLHGRYVCKAR 209
+DT++ RI +RI + + V + + + L+ G +C
Sbjct: 295 IDTNVIRIFSRITDTINYSGSTVLTKHCERVSRVLCEDDSNYSDLSQALMDLGSSICNG- 353
Query: 210 KPQCQSCIISNLCK-RIKQ 227
PQC C +S C +K+
Sbjct: 354 SPQCAQCPLSKHCLIYLKK 372
>gi|119497831|ref|XP_001265673.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
gi|119413837|gb|EAW23776.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
Length = 432
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 47/270 (17%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYVN------HF 49
V ++K G+ + + + + P+ ELY+ + F
Sbjct: 126 VPARKIKGDDGSIQIEPPSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRF 185
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG---------------------- 87
++A++LS+Q+ D A + L +
Sbjct: 186 QTLIALMLSSQTKDTVTAVAMQRLHTELGNGRAPAEDPIVKKEEQEDIDLKSSQPQRDST 245
Query: 88 ----------EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+KL IRT+G + K++ I + + IL +++++ IP T E L +LPG+G
Sbjct: 246 LNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVG 305
Query: 138 RKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A + +S A+G VD H+ RI+N G KTP + +L +P + +
Sbjct: 306 PKMAYLCMSAAWGKDEGIGVDVHVHRITNLWGWHKTKTPEETRMALESWLPRDKWHEINK 365
Query: 197 WLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
LV G+ VC +C C ++ LCK
Sbjct: 366 LLVGLGQTVCLPVGRRCGECDLAGTKLCKS 395
>gi|302914726|ref|XP_003051196.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
gi|256732134|gb|EEU45483.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
Length = 439
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK----------MLAIGEKKLQNYIRTI 98
F +VA++LS+Q+ D K L + ++ +LA+ K L +I +
Sbjct: 182 FHTLVALMLSSQTKDTVNAVVMKRLQTELPSYKQGAPVGLNLENILAVEPKLLNEFIWQV 241
Query: 99 GIYRKKSE----NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
G + K++ I + I+ ++++ IP T+EGLT LPG+G K A + +S+A+G
Sbjct: 242 GFHNNKTKSACPYIKQAAEIIRDKWNGDIPDTIEGLTSLPGVGPKMAYLCMSVAWGRTEG 301
Query: 155 G-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VD H+ RI+N G K P + +L +P + ++ LV G+ VC +C
Sbjct: 302 IGVDVHVHRITNLWGWNKTKNPEETRAALQSWLPKDRWHEINHLLVGLGQSVCLPVGRKC 361
Query: 214 QSCII--SNLCKR 224
C + LCK
Sbjct: 362 GECDLGMEGLCKA 374
>gi|296133481|ref|YP_003640728.1| HhH-GPD family protein [Thermincola sp. JR]
gi|296032059|gb|ADG82827.1| HhH-GPD family protein [Thermincola potens JR]
Length = 232
Score = 82.3 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
T ++L+ I+ L + P+ F +IV +L+ NV+KA ++L
Sbjct: 7 KTLEKLKHIYDLMFAYFG-PRNWWPGETRFEIIVGAILTQSVAWRNVSKAIENLRAAGIL 65
Query: 80 PQKMLAI-GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT--------LEGL 130
+ + ++++ +I +R K++ + + + +++ + + + L
Sbjct: 66 TLEAMYKAPIEEIEKHIVPTLYWRMKAKKLRAFVNHIMDNYHGDLDKFLQKDKEELRREL 125
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK 189
L GIG + A+ I+ A P VD + RI +R+G ++++Q ++ IPP
Sbjct: 126 LSLYGIGPETADSIILYAAEQPVFVVDAYTRRIFHRLGFFEESVSYDEMQQFFMKHIPPD 185
Query: 190 --HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H +V G C +KP C +C I ++C+ ++
Sbjct: 186 VRYYNEYHALIVGIGNRFCSNKKPDCGNCPIQSVCRFKQR 225
>gi|70988789|ref|XP_749248.1| DNA repair protein Ntg1 [Aspergillus fumigatus Af293]
gi|66846879|gb|EAL87210.1| DNA repair protein Ntg1, putative [Aspergillus fumigatus Af293]
Length = 432
Score = 81.9 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 50/269 (18%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIF---YLFSLKWPSPK------GELYYVN------HFT 50
+ + +G + + P E I+ P+ ELY+ + F
Sbjct: 127 PARNIKGENGSIKIEPPSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRFQ 186
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG----------------------- 87
++A++LS+Q+ D A + L + +
Sbjct: 187 TLIALMLSSQTKDTVTAVAMQRLHTELGNGRALAEDPIVKKEEQEDIDLKSSQPLKDSTL 246
Query: 88 ---------EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+KL IRT+G + K++ I + + IL +++++ IP T E L +LPG+G
Sbjct: 247 NLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVGP 306
Query: 139 KGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
K A + +S A+G VD H+ RI+N G KTP + +L +P + +
Sbjct: 307 KMAYLCMSAAWGKDEGIGVDVHVHRITNLWGWHKTKTPEETRMALESWLPRDKWHEINKL 366
Query: 198 LVLHGRYVCKARKPQCQSCIIS--NLCKR 224
LV G+ VC +C C ++ LCK
Sbjct: 367 LVGLGQTVCLPVGRRCGECDLAGTKLCKS 395
>gi|45185964|ref|NP_983680.1| ACR278Wp [Ashbya gossypii ATCC 10895]
gi|44981754|gb|AAS51504.1| ACR278Wp [Ashbya gossypii ATCC 10895]
Length = 367
Score = 81.9 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
+S +GC P L E + + + L+Y L+VA++LSAQ+ D
Sbjct: 93 RSKIITPVDTVGCASLPLTLNEKYGILKDQIK----PLHYR--LQLLVALMLSAQTKDET 146
Query: 66 VNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGIYRKKSENIISLSHILI 116
A +L + + + L I +G +RKK+ I +L
Sbjct: 147 NAIAMNNLMDYCMNNIGIKEGITLEALLQIEEKQLDTLIHPVGFHRKKAAYIKRAMPMLQ 206
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGAN-VILSMAFGIPTIGVDTHIFRISNRIGLAP---G 172
EF +P T+EG LPG+G K + + IGVD H+ R+S
Sbjct: 207 EEFGGDVPTTIEGFNSLPGVGNKIGFLALQKSWGIVAGIGVDVHVDRLSKMWRWVDAKKC 266
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
KTP ++L +P + + LV G+ +C +R +C C+ +++C
Sbjct: 267 KTPEHTRKALEEWVPRELWNEINPLLVGFGQVICPSRGKRCDLCLANDIC 316
>gi|303313429|ref|XP_003066726.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106388|gb|EER24581.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 449
Score = 81.9 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 51/275 (18%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL---KWPSPK------GELYYVN---- 47
+ K + S + P G + P E+++ L + P+ ELY+ N
Sbjct: 149 LPKKKATKSRKPPPPPGSVAPPPNWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQ 208
Query: 48 --HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--------------- 90
F ++VA++LS+Q+ D A L D
Sbjct: 209 ERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTHS 268
Query: 91 ------------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L I+T+G + K++ + S + IL + +++ IP+T L
Sbjct: 269 AGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMA 328
Query: 133 LPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+G K A + +S A+G+ VD H+ RI+N G KTP + L +P +
Sbjct: 329 LPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWVRTKTPEETRVLLEAWLPREKW 388
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
++ LV G+ VC +C C+++ LC+
Sbjct: 389 REINWLLVGLGQTVCLPVGRRCWECVLAGTGLCRA 423
>gi|302343836|ref|YP_003808365.1| HhH-GPD family protein [Desulfarculus baarsii DSM 2075]
gi|301640449|gb|ADK85771.1| HhH-GPD family protein [Desulfarculus baarsii DSM 2075]
Length = 214
Score = 81.9 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 13/215 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IA 77
+ T + L EI + P+ F ++V +L+ + NV +A +L A
Sbjct: 1 MTTGQRLREIHDRLFAAYG-PQYWWPGETPFEVMVGAVLTQNTNWTNVERAIANLKAADA 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTLEG 129
+P M A+ +L IR G Y K+ + L + + +
Sbjct: 60 LSPAAMAALAPAELAELIRPAGYYNIKAARLGHLLRTMEAHREGGLSRLLARPTDELRHK 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPP 188
L G+G + A+ IL A G P VD + FRI R GLA ++++++ P
Sbjct: 120 LLATKGVGPETADSILLYAAGRPIFVVDAYTFRILGRHGLADESMGYFDLQEAVMDATPH 179
Query: 189 K--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
H LV G+ CK KP CQ C + +
Sbjct: 180 DAAFYNEFHALLVRLGKQRCKKSKPLCQGCPLEDF 214
>gi|297665107|ref|XP_002810950.1| PREDICTED: a/G-specific adenine DNA glycosylase-like [Pongo abelii]
Length = 479
Score = 81.9 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 57/207 (27%), Gaps = 62/207 (29%)
Query: 32 FSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ K +L + + + V+ ++ Q+ V + T
Sbjct: 86 LLSWYDQEKRDLPWRRRAEDEVDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMKKWPTL 145
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + + + +G Y + + + I + + + Q L GL
Sbjct: 146 QDLPSASLEGVNQLWAGLGYYCNVARVLCRVRAIGADPQQHLVSQQLWGL---------- 195
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
+++ P + + +
Sbjct: 196 -----------------------------------------AQQLVDPARPGDFNQAAME 214
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIKQ 227
G VC ++P C C + +LC+ ++
Sbjct: 215 LGATVCTPQRPLCSQCPVESLCRARQR 241
>gi|227873633|ref|ZP_03991870.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227840504|gb|EEJ50897.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 391
Score = 81.9 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 14/224 (6%)
Query: 16 LGCLYTPKEL----EEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNK 68
+ ++ + + + L + + ++ ++ Q+ V
Sbjct: 3 EAKMKEKRQFSGGEDPFAKALLSWYNENRRILPWREDPGPYHTWLSEIMLQQTRVEAVKG 62
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ E+K+ +G Y ++ N+ + ++ E+ ++P+T +
Sbjct: 63 YYSRFLSALPEIADLANAEEEKVLKLWEGLGYYS-RARNLQKAAKTIMTEYAGEMPKTFQ 121
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIP 187
L +LPGIG A I S+ + +D ++ RI R+ P + ++
Sbjct: 122 ELKKLPGIGEYTAAAIASIVYKEEIPALDGNLLRIFARLTSYPKVVLEPEGKKLAFSYFQ 181
Query: 188 PK----HQYNAHYWLVLHGRYVCKARKPQ-CQSCIISNLCKRIK 226
K + + L+ G VC + C++C + C K
Sbjct: 182 EKMQGIDPGDFNQALMDLGSGVCLPKGEIGCKTCPLKAFCSSAK 225
>gi|304437510|ref|ZP_07397467.1| A/G-specific adenine glycosylase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369487|gb|EFM23155.1| A/G-specific adenine glycosylase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 374
Score = 81.9 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 80/196 (40%), Gaps = 12/196 (6%)
Query: 37 PSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + +L + + + + ++ ++ Q+ V + + A+ + L
Sbjct: 27 PDTR-DLPWRDEPTPYHVWISEIMLQQTRAAVVRAYYLRFLTALPSVHDLAAVNDDALMK 85
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+ +G Y ++ N+ + +++ E +P + L +LPGIGR A+ I S A+G P
Sbjct: 86 LWQGLGYYS-RARNLKRAAQVIVKEHGGDLPNDFDALLKLPGIGRYTASAIASFAYGQPR 144
Query: 154 IGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQ-----YNAHYWLVLHGRYVCK 207
VD + R++ RI + ++SL + + + + G +C
Sbjct: 145 PAVDGNFLRVAARITANPIDIGKDSTKRSLEAALSASYPEGRDAGLLNEAFMDIGATICL 204
Query: 208 AR-KPQCQSCIISNLC 222
P C SC + LC
Sbjct: 205 PHGAPLCHSCPAAQLC 220
>gi|67479287|ref|XP_655025.1| endonuclease III [Entamoeba histolytica HM-1:IMSS]
gi|56472130|gb|EAL49639.1| endonuclease III, putative [Entamoeba histolytica HM-1:IMSS]
Length = 241
Score = 81.9 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
F + LS Q+ D + K L E + + + L N I+ +G Y K+
Sbjct: 57 PFYAFIGTFLSPQTRDQITFASVKKLHETLGELSVDVINNTSLEVLINCIKGVGFYTTKA 116
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRIS 164
+ + I+ +++N++PQT + L LPG+G K A++ILS+ F ++ +DTH+F IS
Sbjct: 117 KRLKHCCVIMKEQYNNQVPQTKQQLLTLPGVGPKIASLILSIGFDRLESLAIDTHVFVIS 176
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
R+G A G TP KV L +P + + LV G+ C+ P+C+ C I + C+
Sbjct: 177 QRLGWADGSTPEKVRLQLESWLPKEEWPLFNKSLVAFGQCCCRKTHPKCKQCPIQDKCQY 236
Query: 225 I 225
Sbjct: 237 Y 237
>gi|46137371|ref|XP_390377.1| hypothetical protein FG10201.1 [Gibberella zeae PH-1]
Length = 465
Score = 81.5 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP--------- 80
+ + SPK F +VA++LS+Q+ D + L
Sbjct: 216 ERLADEKASPK-----DQRFHTLVALMLSSQTKDTVNAVVMRKLQTELPPFEPGAPPGLN 270
Query: 81 -QKMLAIGEKKLQNYIRTIGIYRKKSENI--ISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+LAI K L +I +G + K++ + S + IL +++D IP T+EGL LPG+G
Sbjct: 271 LNNVLAIDPKTLNEFIWAVGFHNNKTKFVLPPSTAEILRDQWDGDIPDTIEGLVSLPGVG 330
Query: 138 RKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
K + LS+A+G VD H+ RI+N G K P + +L +P + ++
Sbjct: 331 PKMGYLCLSVAWGKHEGIGVDVHVHRITNLWGWHKTKNPEETRTTLQSWLPQDRWHEINH 390
Query: 197 WLVLHGRYVCKARKPQCQSC--IISNLCKR 224
LV G+ VC +C C + LCK
Sbjct: 391 LLVGLGQSVCLPVGRKCGECDLGLQGLCKA 420
>gi|332800460|ref|YP_004461959.1| HhH-GPD family protein [Tepidanaerobacter sp. Re1]
gi|332698195|gb|AEE92652.1| HhH-GPD family protein [Tepidanaerobacter sp. Re1]
Length = 217
Score = 81.5 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 83/215 (38%), Gaps = 13/215 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L +I+ + P+ + F +IV +L+ + NV KA +L
Sbjct: 1 MPKETLVKIYDKLLEAFG-PQHWWPADDDFEIIVGAILTQSVSWKNVEKAIDNLKAKGLL 59
Query: 80 PQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGL 130
+ +K L I++ Y +K+ + + + + + IP L
Sbjct: 60 SLDAILAVDKDKLAALIKSTMYYNQKALKLKNFCRYIKQNYGGDIYSLFEKSIPNMRAEL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIPPK 189
+ GIG + A+ I+ A P VD + RI +R L ++++ + +P
Sbjct: 120 LSIKGIGPETADSIILYAAAKPIFVVDAYTRRIFSRLGFLPDDAKYSQMQDFFMSNLPSD 179
Query: 190 --HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V G+ CK +KP C C + N C
Sbjct: 180 VNLFNEYHALIVRLGKDYCKNKKPLCNECPVKNHC 214
>gi|289523004|ref|ZP_06439858.1| endonuclease III [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503547|gb|EFD24711.1| endonuclease III [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 255
Score = 81.5 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN-HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+ + + + + W + + ++ +LS + D N ++A + L +
Sbjct: 29 REWVLNVIDVLAGLWSHLRPAKTTSDEPLDGLILTILSQNTNDKNRDRAYEFLRSRSPRW 88
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK---------IPQTLEGLT 131
+ +L E +L I+ G+ K+ I S+ ++ F + + ++ L+
Sbjct: 89 EDVLVTAETELAEVIKPAGLSNIKASRIKSVLGLITERFGSCSLKPLKGMKKEEIIDFLS 148
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH 190
LPG+G K +L GIP VDTH+ R+ RIG K TP + ++ + +IP
Sbjct: 149 SLPGVGPKTVACVLLFDLGIPAFPVDTHVNRLCKRIGWVSPKSTPEETQKIMGSVIPSDL 208
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCII--SNLC 222
++AH ++ HGR +C +R+P+C C + NLC
Sbjct: 209 YWSAHLDIISHGRNICVSRRPKCTICPLNARNLC 242
>gi|322493301|emb|CBZ28586.1| putative A/G-specific adenine glycosylase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 501
Score = 81.5 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 22/198 (11%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS- 105
+ + + V+ ++S Q+ V + + + + A E ++++ +G YR+
Sbjct: 79 DSYQVWVSEVMSQQTRMETVIPYYAAWMKKFPSIEALAASTEDEVKSVWAGMGYYRRAIY 138
Query: 106 -----ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ ++ S + +P + E L ++PGIG + I SM FG P VD ++
Sbjct: 139 LRKGAKYLLERSREREATGSSCMPSSQEELLKVPGIGPYTSAAIASMCFGEPVCSVDGNV 198
Query: 161 FRISNRIGLAPGKTP------NKVEQSLLRIIPPK---------HQYNAHYWLVLHGRYV 205
R+ +R+ P K ++I + L+ G V
Sbjct: 199 IRVLSRLRGERDFDPKVPANVKKAAAWGQQLIGNSPTTSAVVCQDPSALNQGLMELGASV 258
Query: 206 CKAR-KPQCQSCIISNLC 222
C+ P C SC + C
Sbjct: 259 CRPSGAPLCASCPLQRFC 276
>gi|262341343|ref|YP_003284198.1| endonuclease III [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272680|gb|ACY40588.1| endonuclease III [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 216
Score = 81.5 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 70/179 (39%), Positives = 108/179 (60%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
+PSP LYY+N +TL+++VLL+A+S + VN+ TKHLF+ TP+ M+ ++
Sbjct: 1 MDSLYPSPTSTLYYINEYTLLISVLLTAKSKEKKVNEITKHLFKKIRTPRDMIRFSVDEI 60
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+N+I+ IG+Y KKS+NI LS ILIN+++N IP+ + L LPG+G K A+V LS +
Sbjct: 61 KNFIKNIGLYNKKSKNIYDLSTILINKYNNVIPKNISILKSLPGVGHKTASVFLSHVSNV 120
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
P VDTHI R+ R L+ GK K E+ RI + H ++ + + ++K
Sbjct: 121 PVFPVDTHIHRMMARWQLSDGKNVKKTEKDAKRIFNKINWKKLHLQIIFYAKEYSPSKK 179
>gi|167515508|ref|XP_001742095.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778719|gb|EDQ92333.1| predicted protein [Monosiga brevicollis MX1]
Length = 224
Score = 81.5 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLF--EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
F ++V+++LS+Q+ D AT+ L TP+ M ++ + + I +G +R+K E
Sbjct: 43 FHVLVSLMLSSQTKDAMTAAATRRLQALPGGLTPKSMASMEPEAIAQVIYGVGFWRRKGE 102
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISN 165
I + IL+ E + +P T+ L +LPG+G K A + +++ + IG+D H RI+N
Sbjct: 103 YIHKTAKILLAEHNGDVPATIAELVKLPGVGMKMAQIAMAVAHNTVTGIGIDVHCHRIAN 162
Query: 166 R--IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
R KTP +L R +P + + LV G+ +C R P+C SC+ ++C
Sbjct: 163 RLAWCDTAQKTPEHTRVALERWLPRELWGEINLLLVGFGQQICLPRGPKCHSCLNRDICP 222
Query: 224 R 224
Sbjct: 223 A 223
>gi|322698383|gb|EFY90154.1| putative DNA repair protein NTG1 [Metarhizium acridum CQMa 102]
Length = 399
Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT---------- 79
+ + SPK F ++A++LS+Q+ D A K L
Sbjct: 150 ERLADRNASPK-----DQRFHTLIALMLSSQTKDTVNAVAMKRLQTELPPHKPGAPPGLN 204
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
+LA+ L I +G + K++ I + IL +++ IP T+EGLT LPG+G K
Sbjct: 205 LDNVLAVDANLLNELIWAVGFHNNKTKYIKQAAVILRDKWKGDIPDTIEGLTSLPGVGPK 264
Query: 140 GANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
A++ LS A+ VD H+ RI+N G K P + ++L +P ++ L
Sbjct: 265 MAHLCLSAAWDRTEGIGVDVHVHRITNLWGWNKTKNPEETRRALQSWLPRDKWREINWLL 324
Query: 199 VLHGRYVCKARKPQCQSC--IISNLCKRIKQ 227
V G+ VC +C C +S LCK ++
Sbjct: 325 VGFGQAVCLPVGRRCGDCDLGLSGLCKAAER 355
>gi|303272029|ref|XP_003055376.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463350|gb|EEH60628.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 298
Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +V+ +LS+Q+ D + AT L + TP+ + A + L IR +G + +K + +
Sbjct: 87 FVTLVSAMLSSQTKDPITHAATARLVKHGCTPENIAATSAEDLAAIIRPVGFHARKGQYL 146
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + IP ++GL LPG+G K A +++++ +G+P+ I VD H+ RI+ R+
Sbjct: 147 RDAARACVERHGGDIPSDVDGLMALPGVGPKMAYLVMNVGWGVPSGICVDVHVHRIAERL 206
Query: 168 GLAP------------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
G P +TP ++L +P + + LV HG+ C + P+C
Sbjct: 207 GWVPSVAFTSNGTPRKNRTPEDTREALEAWLPREEWIEINPLLVGHGQLTCAPKAPKCGE 266
Query: 216 CIISNLCKR 224
C + +C
Sbjct: 267 CAANAMCPS 275
>gi|94984892|ref|YP_604256.1| HhH-GPD [Deinococcus geothermalis DSM 11300]
gi|94555173|gb|ABF45087.1| Endonuclease III, alpha helical glycosidase superfamily
[Deinococcus geothermalis DSM 11300]
Length = 269
Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 90/247 (36%), Gaps = 29/247 (11%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLK-WPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
+ +P + P L EI + P+P ++ ++L+ Q+T V
Sbjct: 14 SAPRLSRPTPAQEVPPPPHLPEIMRRLAATSLPTPLTPHVSREPLDSLIRLILAQQNTSV 73
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH----------- 113
+ L + LA G ++ +R G +++ +
Sbjct: 74 LTRRQFGALKTAYPVWEAALADGPDGVEAVLRAAGGGLARTKADSIWNVLHRLAELGLAG 133
Query: 114 ------------ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
L + L LPG+G K A+++L P I ++ +I
Sbjct: 134 ELGLAGEGRGGLSLRVLRTMTDEEARALLESLPGVGMKTASLLLLFDLARPAIPIENNIH 193
Query: 162 RISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYN---AHYWLVLHGRYVCKARKPQCQSCI 217
R++ R+ L P K E+ ++P + H + HGR C+A++P+C C+
Sbjct: 194 RVAGRLDLFPSRWNVLKAERWFDEVLPRD-WLDRATFHVSAIRHGRQTCRAQRPRCACCV 252
Query: 218 ISNLCKR 224
+ +LC
Sbjct: 253 LQDLCPS 259
>gi|167375600|ref|XP_001733691.1| endonuclease III [Entamoeba dispar SAW760]
gi|165905090|gb|EDR30183.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 241
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
F + LS Q+ D + K L E T + + L N I+ +G Y K+
Sbjct: 57 PFYAFIGTFLSPQTRDQITFASVKKLHETLGELTIDVINNTSLEVLINCIKGVGFYTTKA 116
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRIS 164
+ + I+ +F+N++PQT + L LPG+G K A++ILS+ F ++ +DTHIF IS
Sbjct: 117 KRLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASLILSIGFDRLESLAIDTHIFVIS 176
Query: 165 NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+R+G A G TP KV L +P + + +V G+ C+ P+C+ C I + C
Sbjct: 177 HRLGWADGSTPEKVRLQLESWLPKEEWSLFNKSIVAFGQCCCRKIHPKCKQCPIQDKCHY 236
Query: 225 IKQ 227
+
Sbjct: 237 YHK 239
>gi|171692077|ref|XP_001910963.1| hypothetical protein [Podospora anserina S mat+]
gi|170945987|emb|CAP72788.1| unnamed protein product [Podospora anserina S mat+]
Length = 1171
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 35/257 (13%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW---PSPKGELYY------VNH----- 48
+ K + S + P + EE++ L P+ + +
Sbjct: 151 ARKPARRVTSPSGTTTITPPSDWEEVYNLVKEMRINGPAANAAVDTMGCERLADPSSTVK 210
Query: 49 ---FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP----------QKMLAIGEKKLQNYI 95
F +VA++LS+Q+ D +A K L ML L I
Sbjct: 211 DRRFHTLVALMLSSQTKDTVNAEAMKRLHTELPPFEPGAPAGLNLNNMLHCPPAVLNELI 270
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL---SMAFGIP 152
+G + K++ ++ + IL ++F+ IP T+EGL LPG+G K A++ + + +
Sbjct: 271 GKVGFHNNKTKYLLQTAQILKDKFNGDIPPTIEGLVSLPGVGPKMAHLCMSAENGWNRVE 330
Query: 153 TIGVDTHIFRISNRIGLA---PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
IGVD H+ RI+N G KTP + +L +P ++ LV G+ VC
Sbjct: 331 GIGVDVHVHRITNYWGWNGPKETKTPEETRMALQSWLPKDKWKEINWLLVGLGQSVCLPV 390
Query: 210 KPQCQSCI--ISNLCKR 224
+C C + LCK
Sbjct: 391 GRRCGDCEVGLKGLCKA 407
>gi|39998466|ref|NP_954417.1| helix-hairpin-helix domain-containing protein [Geobacter
sulfurreducens PCA]
gi|39985413|gb|AAR36767.1| helix-hairpin-helix domain protein [Geobacter sulfurreducens PCA]
Length = 228
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 14/215 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTP 80
L ++ + P+ F + V +L+ + NV KA L +P
Sbjct: 16 RDRLMAVYDQLFAAYG-PRHWWPADTPFEVCVGAILTQNTNWGNVEKAIVRLKAAGLLSP 74
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI--------NEFDNKIPQTLEGLTR 132
+ + + +L IR G Y KS + L F + + L
Sbjct: 75 EGLRDVPVAELAETIRPAGYYNVKSARLKDFVGFLFGRFGGSLERMFAGEWRELRRELLG 134
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPK-- 189
+ GIGR+ A+ IL A G P+ VD + R+ + +GL AP V + +P
Sbjct: 135 VRGIGRETADSILLYAGGKPSFVVDAYTKRLFSALGLVAPTTDYETVRALFMDNLPEDTT 194
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V H + C R P+C C + LC+
Sbjct: 195 LFNEYHALIVEHCKRHCTTR-PRCGECGLHLLCRA 228
>gi|298709647|emb|CBJ31456.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 289
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA------IGEKKLQNYIRTIGIYR 102
F ++++ +LS+Q+ D + + A + E L + + +
Sbjct: 82 FQVLMSAMLSSQTKDPVTAAGLNRMRQACAPAPLGAAALLATGMDEDALTELLHPVSFKK 141
Query: 103 KKSEN----IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVD 157
K+++ L+ IP T+EGL LPG+G K +++ +A+G I VD
Sbjct: 142 TKAKHILMVCKRLAEAEDGRQAGAIPDTVEGLLELPGVGPKMTYLVMDVAWGRNEGICVD 201
Query: 158 THIFRISNRIGLAPGKT--------PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
TH+ RISNR+G P K + L +P +H + LV G+ VC A
Sbjct: 202 THVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFAT 261
Query: 210 KPQCQSCIISNLCKR 224
+P C +C IS LC
Sbjct: 262 RPSCSACGISGLCPS 276
>gi|327304823|ref|XP_003237103.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
gi|326460101|gb|EGD85554.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
Length = 460
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 38/236 (16%)
Query: 25 LEEIFYLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNVNKATKH 72
+ E + P+ ELY+ + F ++A++LS+Q+ D
Sbjct: 140 VYETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLR 199
Query: 73 LFEI------ADTPQKMLAIGEKK-----------------LQNYIRTIGIYRKKSENII 109
L + ++ +K L IR +G + K+ I
Sbjct: 200 LHTQLTDETSDNPVAEVWDRDHQKTTSTLTLENMLAVSPERLNELIRAVGFHNNKTRYIK 259
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIG 168
+ + IL ++FD+ IP T+EGL LPG+G K A + +S A+ VD H+ RI+N G
Sbjct: 260 ATAEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWNKHEGIGVDVHVHRITNLWG 319
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLC 222
KTP +L +P + + LV G+ VC +C C +S LC
Sbjct: 320 WNKTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCTECDLSGTGLC 375
>gi|297743769|emb|CBI36652.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----PQKMLAIGEKKLQNYIRTIGIYRKK 104
F ++V+ LLS+Q+ D + + + + E +++ I +G Y +K
Sbjct: 171 FAVLVSSLLSSQTKDNVTHGNAGAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRK 230
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRI 163
+ N+ ++ I + ++D IP +LE L LPGIG K A++++++ + I VDTH+ RI
Sbjct: 231 AGNLKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRI 290
Query: 164 SNRIGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
NR+G P + +SL +P + + LV G+ +C +P+C C
Sbjct: 291 CNRLGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINPLLVGFGQTICTPLRPRCGVC 350
Query: 217 IISNLCKR-IKQ 227
+S+LC K+
Sbjct: 351 GVSDLCPSAFKE 362
>gi|119191666|ref|XP_001246439.1| hypothetical protein CIMG_00210 [Coccidioides immitis RS]
Length = 451
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 53/277 (19%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL---KWPSPK------GELYYVN---- 47
+ K + S + P G + P E+++ L + P+ ELY+ N
Sbjct: 149 LPKKKATKSRKPPPPPGSVAPPPNWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQ 208
Query: 48 --HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--------------- 90
F ++VA++LS+Q+ D A L D +
Sbjct: 209 ERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDGNNEDGGADASKKPAVRWDTTT 268
Query: 91 --------------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
L I+T+G + K++ + S + IL + +++ IP+T L
Sbjct: 269 HSAGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADL 328
Query: 131 TRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
LPG+G K A + +S A+G+ VD H+ RI+N G KTP + L +P +
Sbjct: 329 MALPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWVRTKTPEETRVLLEAWLPRE 388
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
++ LV G+ VC +C C ++ LC+
Sbjct: 389 KWREINWLLVGLGQTVCLPVGRRCWECALAGTGLCRA 425
>gi|320036319|gb|EFW18258.1| DNA repair protein Ntg1 [Coccidioides posadasii str. Silveira]
Length = 449
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 51/275 (18%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL---KWPSPK------GELYYVN---- 47
+ K + S + P G + P E+++ L + P+ ELY+ N
Sbjct: 149 LPKKKATKSRKPPPPPGSVAPPPNWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQ 208
Query: 48 --HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--------------- 90
F ++VA++LS+Q+ D A L D
Sbjct: 209 ERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTHS 268
Query: 91 ------------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
L I+T+G + K++ + S + IL + +++ IP+T L
Sbjct: 269 AGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMA 328
Query: 133 LPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+G K A + +S A+G+ VD H+ RI+N G KTP + L +P +
Sbjct: 329 LPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWVRTKTPEETRVLLEAWLPREKW 388
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
++ LV G+ VC +C C ++ LC+
Sbjct: 389 REINWLLVGLGQTVCLPVGRRCWECALAGTGLCRA 423
>gi|4455098|gb|AAD21076.1| A/G-specific adenine glycosylase [Streptomyces antibioticus]
Length = 307
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 11/199 (5%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + + + + ++V+ + Q+ V + P + A
Sbjct: 27 DWFDDHARDCPWRHPEAGAWAVMVSEFMLQQTPVSRVLPVYEQWLARVPRPADLAADAPG 86
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ +G R+ + + + + T L LPGIG A + S A+
Sbjct: 87 EAVRAWGRLGYPRRALR-LHGAAVAITERHGGDVVGTTAQLLALPGIGEYTAAAVASFAY 145
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLRIIPPKH--QYNAHYWLVLHGR 203
G +DT++ R+ R PN + ++P + G
Sbjct: 146 GQRHAVLDTNVRRVFARAVTGVQYPPNATTAAERRLARALLPEDEGTAARWAAASMELGA 205
Query: 204 YVCKARKPQCQSCIISNLC 222
VC A+ C C I+ C
Sbjct: 206 LVCTAKNETCVRCPIAGQC 224
>gi|303284701|ref|XP_003061641.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456971|gb|EEH54271.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 192
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM---LAIGEKKLQNYIRTIGIYRKKS 105
F +VA LLS Q D +A L + + A + +++ + R K+
Sbjct: 9 FQALVATLLSVQCRDGVALRAMTRLRDALGGQCVVAAVTAATRETIEDAVSCCNYKRTKA 68
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRIS 164
+ ++ + + +P+T+ L LPG+G K A+++ S+AFG + + VD H+ R++
Sbjct: 69 RYVKEVAAAIRAKHRGVVPRTVVELKTLPGVGPKIAHLVASVAFGEASGVVVDAHVRRVA 128
Query: 165 NRIGL---APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+R+G A ++ + +P + A L+ HG+ C ARKP+C C ++N
Sbjct: 129 SRLGWTTDAESRSAEATRARMEEWLPREEWERATLALIAHGQETCDARKPRCGECAVANA 188
Query: 222 CKR 224
C
Sbjct: 189 CPS 191
>gi|268575464|ref|XP_002642711.1| C. briggsae CBR-NTH-1 protein [Caenorhabditis briggsae]
Length = 272
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++VA++LS+Q+ D A K L + + Q + A L+ + +G Y++K+ I
Sbjct: 77 FQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIQTIRAFPVSDLEKILCPVGFYKRKAVYI 136
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ IL + + IP TL+GL LPG+G K AN+++ +A+G
Sbjct: 137 QQTAKILEDSYSGDIPDTLDGLCSLPGVGPKMANLVMQIAWGKC---------------- 180
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
TP K +++L ++P ++ LV G+ +C+ +P+C +C+ C
Sbjct: 181 WIKTTTPEKTQKALESLLPRSEWQPINHLLVGFGQMLCQPVRPKCATCLCRLTCPS 236
>gi|282858130|ref|ZP_06267325.1| A/G-specific DNA-adenine glycosylase [Pyramidobacter piscolens
W5455]
gi|282584052|gb|EFB89425.1| A/G-specific DNA-adenine glycosylase [Pyramidobacter piscolens
W5455]
Length = 365
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 11/213 (5%)
Query: 20 YTPKELE-EIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ ++ E + + S K +L + + + ++V+ + Q+ V E
Sbjct: 1 MSAEKFHLEAAEALTAWYNSHKRDLPWRLDRDPYHILVSEAMLQQTQVERVKSFYARWME 60
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + + E + + +G Y + + ++ +P E L LPG
Sbjct: 61 RFPTLTSLASASEDDVLACWQGLGYYSRARNL-RRAARLVSGAGLKTLPADEEFLRSLPG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKH 190
+G + S+AF +P +D ++ R+ +R+ P + I+
Sbjct: 120 LGPYTVGAVCSIAFDLPVPAIDGNVRRVFSRLLDMPDDPARAKGTALIAAHAAAILKLGS 179
Query: 191 QYNAHYWLVLHGRYVCKA-RKPQCQSCIISNLC 222
+ + G VC QC C +S LC
Sbjct: 180 PHILTQAFMELGATVCTPGTTCQCGQCPVSRLC 212
>gi|242780466|ref|XP_002479601.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
gi|218719748|gb|EED19167.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
Length = 448
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 63/285 (22%)
Query: 3 SSKKSDSYQGNSPLGCLYTP------------KELEEIFYLFSLKWPSPK------GELY 44
+ + + S Q P + + + I + P+ EL+
Sbjct: 106 TPRSASSKQRRQPAKRIKREDGSIEMQPPSNWETMYNIVKKMRAENPTAPVDTMGCAELH 165
Query: 45 YVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEI---------------------- 76
+ + F +VA++LS+Q+ D A + L
Sbjct: 166 WRSSPPKDQRFQTLVALMLSSQTKDTVTAVAMQRLHTELAQGGGSTNETKPLIKKEEDDD 225
Query: 77 --------------ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
T Q MLA+ ++L IRT+G + K++ I +++IL +++++
Sbjct: 226 DKDGIKFNHEKKDSTLTVQNMLAVSPERLNELIRTVGFHNNKTKYIKQVANILRDQYNSD 285
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQS 181
IP T L LPG+G K A + +S A+G VD H+ RI+N G KTP + +
Sbjct: 286 IPSTPVELMALPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWHTTKTPEETRIA 345
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
L +P + + LV G+ VC +C C ++ LCK
Sbjct: 346 LQSWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECELAGTGLCKS 390
>gi|288927382|ref|ZP_06421229.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 317
str. F0108]
gi|288330216|gb|EFC68800.1| A/G-specific adenine glycosylase [Prevotella sp. oral taxon 317
str. F0108]
Length = 386
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 25/204 (12%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ + T + A E ++ + +G Y +
Sbjct: 7 KDPYAIWLSEVILQQTRVSQGMAYWQRFMRNYPTVNALAAATEDEVLRLWQGLGYYSRAR 66
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ I P T E +++L G+G + I S+AF +P VD +++R+
Sbjct: 67 NLHQAAKQIAEL---GHFPNTHEEISKLKGVGPYTSAAIASIAFNLPVAVVDGNVYRVLA 123
Query: 166 RIG-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK---------- 210
R + + + ++P + ++ G C K
Sbjct: 124 RFFGIDTPINSTEGKKQFATLAQSLLPHHAPARYNEAIMDFGALQCLPVKGETGKVNGHT 183
Query: 211 --PQ-----CQSCIISNLCKRIKQ 227
P C SC +S C Q
Sbjct: 184 VAPNDTPSFCNSCPLSGQCVAFAQ 207
>gi|70925333|ref|XP_735375.1| A/G-specific adenine glycosylase [Plasmodium chabaudi chabaudi]
gi|56508981|emb|CAH86319.1| A/G-specific adenine glycosylase, putative [Plasmodium chabaudi
chabaudi]
Length = 217
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 8/180 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + ++ ++ Q+ V T ++ + + +G Y +++N+
Sbjct: 3 YQIYISEVMLQQTKVATVLNFYLKWMNKWPTIFDLVKSNLDDILTEWKGLGYYN-RAKNL 61
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ +++N++D P L+ L LPGIG A I + I VDT+I RI +RI
Sbjct: 62 LDCCKVVVNKYDGIFPNDLKLLKELPGIGNYTAKAISIHLYNSKDICVDTNIIRIFSRIT 121
Query: 169 LAPGKTPNKVEQSLLR------IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + + + + L+ G +C + PQC C ++ C
Sbjct: 122 DTINYYGSTILSQHCEEVSNILCTDTCNYSDFNQALMDLGSSICNS-SPQCSICPLNKYC 180
>gi|322710098|gb|EFZ01673.1| putative DNA repair protein NTG1 [Metarhizium anisopliae ARSEF 23]
Length = 399
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----------PQKMLAIGEKKLQNYIRTI 98
F ++A++LS+Q+ D A K L +LA+ L I +
Sbjct: 164 FHTLIALMLSSQTKDTVNAVAMKRLQTELPPHKPGAPPGLNLDNVLAVDANLLNQLIWAV 223
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VD 157
G + K++ I + IL +++ IP T++GLT LPG+G K A++ LS A+ VD
Sbjct: 224 GFHNNKTKYIKQAAVILRDQWKGDIPDTIQGLTSLPGVGPKMAHLCLSAAWDRTEGIGVD 283
Query: 158 THIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC- 216
H+ RI+N G K P ++L +P ++ LV G+ VC +C C
Sbjct: 284 VHVHRITNLWGWNKTKNPEDTRRALQSWLPRDKWREINWLLVGFGQAVCLPVGRKCGDCD 343
Query: 217 -IISNLCKRIKQ 227
++ LCK ++
Sbjct: 344 LGLNGLCKAAER 355
>gi|302506539|ref|XP_003015226.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
gi|291178798|gb|EFE34586.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
Length = 1131
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 38/234 (16%)
Query: 27 EIFYLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLF 74
E + P+ ELY+ + F ++A++LS+Q+ D L
Sbjct: 102 ETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRLH 161
Query: 75 EI------ADTPQKMLAIGEKK-----------------LQNYIRTIGIYRKKSENIISL 111
+ ++ +K L IR +G + K+ I +
Sbjct: 162 TQLTDETSNNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKAT 221
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLA 170
+ IL ++FD+ IP T+EGL LPG+G K A + +S A+ VD H+ RI+N G
Sbjct: 222 AEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGWN 281
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLC 222
KTP +L +P + + LV G+ VC +C C +S LC
Sbjct: 282 KTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLC 335
>gi|313678988|ref|YP_004056727.1| hhh-gpd family protein [Oceanithermus profundus DSM 14977]
gi|313151703|gb|ADR35554.1| HhH-GPD family protein [Oceanithermus profundus DSM 14977]
Length = 216
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 8/204 (3%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
EI + + + + + VA L ++ V A + L ++
Sbjct: 6 REITNALLRWGEKNLRDFPWRGTRDPYRIFVAEFLLQRTRAEQVVPAYEELVRKYPGFEE 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ L IR +G++R ++ + + + I+ +F +P +++ LT + G+G A
Sbjct: 66 LAGADPSGLLEIIRPLGLHR-RANLLQNAARIIKEQFGGLLPPSMKELTSIEGVGTYTAA 124
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL----LRIIPPKHQYNAHYWL 198
IL+ + +P VDT+ R+ R+ K ++ ++ ++P Y L
Sbjct: 125 AILAALYDLPAPAVDTNTLRVLGRVFGLEIKESSRKKREYRDLIESLVPKGQARLYIYAL 184
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ VC R P C C + +C
Sbjct: 185 LDLAATVCTPRNPACDRCPLIRIC 208
>gi|260947100|ref|XP_002617847.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
gi|238847719|gb|EEQ37183.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
Length = 384
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 34 LKWPSPKGE-LYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI-- 86
+ P L + F L+V+++LS+Q+ D A ++L T
Sbjct: 135 ERIPETIAPGLIRRDPRAYRFRLLVSLMLSSQTKDEVTYVAVENLNNFYKTKGFDGLCIE 194
Query: 87 -----GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
E ++ I+ +G +R+K+ I S +L +F+ IP+ ++ LPG+G K
Sbjct: 195 AILKSTEAEIDFCIQKVGFHRRKAVYIKKASELLNEKFNADIPKNIKDTISLPGVGPKMG 254
Query: 142 NVILSMAFGIPTIG-VDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
+++L + I + VD H+ R++ G P P +L +P K+ + + LV
Sbjct: 255 HLLLQAGWRINSGIGVDVHLHRLAQMWGWVPKSDKPESTRLALEDWLPKKYWSDINPLLV 314
Query: 200 LHGRYVCKARKPQCQSCIISN-LCKRIKQ 227
G+ VC C C ++ LC + +
Sbjct: 315 GFGQTVCVPNAGNCDVCTLAAGLCSKANK 343
>gi|167042822|gb|ABZ07540.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine microorganism HF4000_ANIW137I15]
Length = 257
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 18/221 (8%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD- 78
T L +I+ + P+G F + + +L ++ N ++A +L
Sbjct: 11 MTRNSLLDIYERLLHHFG-PRGWWPGETPFEVCIGAVLVQNTSWTNASRAIANLKARKLL 69
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGL 130
+P+ + I + +L + IR + K++ + + L + + L
Sbjct: 70 SPEGLRRIPKFRLAHLIRPARFFNVKADRLKAFVRFLWVGHQGDLNLLFGLPADLLRKYL 129
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRI 185
L GIG + A+ IL A P VD + RI +R+GL G +++ R
Sbjct: 130 LELKGIGPETADSILLYAAEFPVFVVDAYTHRIFSRLGLYQGPPSGRKGYEALQEGFHRF 189
Query: 186 IPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ H LV G+ C+ R P+C+ C +S++C
Sbjct: 190 LSRDAPLYNEYHALLVELGKEYCRPR-PKCEFCPLSSICAY 229
>gi|302652772|ref|XP_003018229.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
gi|291181848|gb|EFE37584.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
Length = 1112
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 38/234 (16%)
Query: 27 EIFYLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLF 74
E + P+ ELY+ + F ++A++LS+Q+ D L
Sbjct: 129 ETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRLH 188
Query: 75 EI------ADTPQKMLAIGEKK-----------------LQNYIRTIGIYRKKSENIISL 111
+ ++ +K L IR +G + K+ I +
Sbjct: 189 TQLTDETSDNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKAT 248
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLA 170
+ IL ++FD+ IP T+EGL LPG+G K A + +S A+ VD H+ RI+N G
Sbjct: 249 AEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGWN 308
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLC 222
KTP +L +P + + LV G+ VC +C C +S LC
Sbjct: 309 KTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLC 362
>gi|291517294|emb|CBK70910.1| A/G-specific DNA glycosylase [Bifidobacterium longum subsp. longum
F8]
Length = 280
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 75/201 (37%), Gaps = 32/201 (15%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+S Q+ V + + A + + +G R+ + + ++
Sbjct: 1 MSQQTQMSRVVPYWHDWMARWPDARALAAAPKADVITAWGRLGYPRRALR-LQECARVVA 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
E+ +++P+T + L LPGIG A+ +LS AFG +DT+I R+ +R+ L
Sbjct: 60 EEYGDELPRTYDELVALPGIGDYTASAVLSFAFGERIAVIDTNIRRVLSRVFLGTESRGG 119
Query: 177 KV----EQSLLRIIPPKH-QYN--------------------------AHYWLVLHGRYV 205
R++P + + ++ G +
Sbjct: 120 AASPAERALANRMLPQDRVCGDGADCTDHAYRSGEHTFLQRSEPPSVTWNQSVMELGAVI 179
Query: 206 CKARKPQCQSCIISNLCKRIK 226
C A+ P C +C I++ C +K
Sbjct: 180 CTAKSPLCDTCPIADDCAFLK 200
>gi|114556231|ref|XP_001155397.1| PREDICTED: mutY homolog isoform 2 [Pan troglodytes]
Length = 397
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 5/159 (3%)
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
T Q + + +++ +G Y + ++ + L
Sbjct: 1 MLKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLL 60
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPP 188
PG+GR A I S+AFG T VD ++ R+ R+ + ++ +++ P
Sbjct: 61 PGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDP 120
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + + G VC ++P C C + +LC+ ++
Sbjct: 121 ARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQR 159
>gi|19173415|ref|NP_597218.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
gi|74621135|sp|Q8SRB8|NTH1_ENCCU RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|19171004|emb|CAD26394.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
Length = 238
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 11/197 (5%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
P F ++V++LLS+Q+ D +A L ++ L
Sbjct: 39 PSCRTEEERRFHILVSLLLSSQTKDEVTYEAMARLRKLLPESAATDGEARGGLTIERVAN 98
Query: 99 GIYRKKSENIISLSHI----------LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ +E I + + +P+ ++ L LPGIG K A + +S A
Sbjct: 99 SDVKHINECIKKVGFHNRKAANLKKIAEILREKGLPREMKDLISLPGIGNKMALLYMSHA 158
Query: 149 FGIPTIGV-DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
DTH+ RISNRIGL + + L R++P K + LV G+ +C
Sbjct: 159 CNRTVGISVDTHVHRISNRIGLVRTRDVESTRRELERVVPRKEWKTINNILVGFGQTICV 218
Query: 208 ARKPQCQSCIISNLCKR 224
A++P+C+ C I C
Sbjct: 219 AKRPRCEECCIRGRCPS 235
>gi|254479628|ref|ZP_05092933.1| hypothetical protein CDSM653_1663 [Carboxydibrachium pacificum DSM
12653]
gi|214034435|gb|EEB75204.1| hypothetical protein CDSM653_1663 [Carboxydibrachium pacificum DSM
12653]
Length = 88
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 45/78 (57%)
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
F I VDTH+FR+SNRIGLA K E+ L+ IIP +H+ L+ HGR +C A
Sbjct: 7 FSKDAIAVDTHVFRVSNRIGLADSKDVLTTEKQLMEIIPKNLWSISHHLLIYHGRNLCTA 66
Query: 209 RKPQCQSCIISNLCKRIK 226
RKP+C C + C K
Sbjct: 67 RKPKCDKCPVKEFCLYFK 84
>gi|297585115|ref|YP_003700895.1| HhH-GPD family protein [Bacillus selenitireducens MLS10]
gi|297143572|gb|ADI00330.1| HhH-GPD family protein [Bacillus selenitireducens MLS10]
Length = 211
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 12/206 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
++ + + + F ++ +L + NV KA L +P+++ A+
Sbjct: 7 LYERLKETYGH-QNWWPADSPFEMMAGAILVQNTNWNNVGKALARLQPDL-SPERIRAMT 64
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLPGIGRKG 140
+++L+ IR G +R K++ + + + + E L ++ GIG +
Sbjct: 65 DEELEERIRPSGFFRMKAQRLRAFLEWFESHGDDVRALQQVETDVLREELLQVKGIGAET 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--QYNAHYWL 198
A+ IL A P +D + RI NRIG K N+ + +P + H
Sbjct: 125 ADSILLYALYRPVFVIDAYTHRIMNRIGYQFPKKYNQAQAFFEEALPKDEALYNDFHAQF 184
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
V H + CK +KP C+ C + C++
Sbjct: 185 VRHAKEHCK-KKPVCEGCPLEPECEK 209
>gi|154340611|ref|XP_001566262.1| A/G-specific adenine glycosylase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063581|emb|CAM39764.1| putative A/G-specific adenine glycosylase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 491
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 22/198 (11%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS- 105
+ + + V+ ++S Q+ V + + + + A E ++++ +G YR+
Sbjct: 69 DPYRVWVSEVMSQQTRMETVIPYYIAWMKKFPSIRTLAASTEDEVKSVWAGMGYYRRAMN 128
Query: 106 -----ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ ++ S +P + E L ++PGIG + I SM FG VD ++
Sbjct: 129 LRKGAQYLLEWSKERGETATPCMPSSQEELLKVPGIGPYTSAAIASMCFGESVCSVDGNV 188
Query: 161 FRISNRIGLAPGKTP------NKVEQSLLRIIPPK---------HQYNAHYWLVLHGRYV 205
R+ +R+ P + + ++ + L+ G V
Sbjct: 189 IRVLSRLRGERDFDPKVSANIKEATRWGQELMGNSPTTSAVICRDPSALNQGLMELGASV 248
Query: 206 CKARK-PQCQSCIISNLC 222
C+ P C SC + C
Sbjct: 249 CRPGGVPLCISCPLEQFC 266
>gi|310796892|gb|EFQ32353.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 469
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----------PQKMLAIGEKKLQNYIRTI 98
+ L+ A++LS+Q+ D A K L + +LA+ L I +
Sbjct: 189 YHLLTALMLSSQTKDTVNAVAMKRLMTELPPHEPGAAGGLNLENVLAVDPAFLNELIWAV 248
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VD 157
G + K++ I + + IL + FD IP T+EGLT LPG+G K A + LS A+ VD
Sbjct: 249 GFHNNKTKYIKAAAEILRDRFDGDIPDTIEGLTSLPGVGPKMAYLCLSAAWDRTEGIGVD 308
Query: 158 THIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC- 216
H+ RI+N G P +L +P ++ LV G+ +C +C C
Sbjct: 309 VHVHRITNLWGWHKTTQPEATRLALQSWLPKDKWREINWLLVGFGQTLCLPVGRKCGECD 368
Query: 217 -IISNLCKRIKQ 227
+S +CK ++
Sbjct: 369 LGLSGMCKAAER 380
>gi|298507410|gb|ADI86133.1| endonuclease III-related protein [Geobacter sulfurreducens KN400]
Length = 214
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 14/215 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTP 80
L ++ + P+ F + V +L+ + NV KA L +P
Sbjct: 2 RDRLMAVYDQLFAAYG-PRHWWPADTPFEVCVGAILTQNTNWGNVEKAIVRLKAAGLLSP 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI--------NEFDNKIPQTLEGLTR 132
+ + + +L IR G Y KS + L F + + L
Sbjct: 61 EGLRDVPVAELAETIRPAGYYNVKSARLKDFVGFLFGRFGGSLERMFAGEWRELRRELLG 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPK-- 189
+ GIGR+ A+ IL A G P+ VD + R+ + +GL AP V + +P
Sbjct: 121 VRGIGRETADSILLYAGGKPSFVVDAYTKRLFSALGLVAPTTDYETVRALFMDNLPEDTT 180
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V H + C R P+C C + LC+
Sbjct: 181 LFNEYHALIVEHCKRHCTTR-PRCGECGLHLLCRA 214
>gi|315045922|ref|XP_003172336.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
gi|311342722|gb|EFR01925.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
Length = 417
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 25 LEEIFYLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNVNKATKH 72
+ E + P+ ELY+ + F ++A++LS+Q+ D A
Sbjct: 100 IYETVKQMRERNPTAPVDTMGCAELYWQSSPPRDRRFHTLIALMLSSQTKDTVTAAAMMR 159
Query: 73 LFEIADTPQKMLAI-----------------------GEKKLQNYIRTIGIYRKKSENII 109
L + ++L I +G + K+ I
Sbjct: 160 LHTQLTDETHDKPVAEVWDRAHQMAPSTLNLENMLAVSPERLNELIGAVGFHNNKTRYIK 219
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIG 168
+ + IL + FD+ IP T+EGL LPG+G K A + +S A+ VD H+ RI+N G
Sbjct: 220 ATAEILRDRFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWNRHEGVGVDVHVHRITNLWG 279
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLC 222
K P +L +P + + LV G+ VC +C C +S LC
Sbjct: 280 WHKTKNPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLC 335
>gi|258573229|ref|XP_002540796.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901062|gb|EEP75463.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 655
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 49/269 (18%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLK---WPSPK------GELYYVN------H 48
KK+ S + G + P EE++ L P+ ELY+ N
Sbjct: 360 KKKAKSRKPAPAPGSIPPPPNWEEMYSLIKDMRLKNPTAPVDTMGCAELYWRNSTEQERR 419
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK------------------ 90
F ++VA++LS+Q+ D A L
Sbjct: 420 FHILVALMLSSQTKDTVTAVAMHRLHTELGPEHDDRDANTPDTKAVAQWDTSTHSTARST 479
Query: 91 -------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
L I ++G + K++ + + + +L D+ IP+T L LPG+G
Sbjct: 480 LTIANILRVPAPRLNQLIHSVGFHNLKTKYLQTTASLLQAHHDSDIPRTAADLMSLPGVG 539
Query: 138 RKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A + +S A+G+ VD H+ RI+N G KTP + L +P ++
Sbjct: 540 PKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWVRTKTPEETRVVLEAWLPRDKWREINW 599
Query: 197 WLVLHGRYVCKARKPQCQSCIIS--NLCK 223
LV G+ VC +C C ++ LCK
Sbjct: 600 LLVGLGQTVCLPVGRRCGECALAGTGLCK 628
>gi|258616295|ref|ZP_05714065.1| endonuclease III [Enterococcus faecium DO]
Length = 172
Score = 80.0 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++ E +P GEL + N F L++AV+LSAQ+TDV+VNKAT LF
Sbjct: 1 MLRKQKTMEALETMYGMFPEAHGELKHNNPFELLIAVILSAQATDVSVNKATPDLFASFP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + ++ I+TIG+YR K++NI + + LI FD ++P + E L LPG+GR
Sbjct: 61 TPDALAEASIDEIILKIKTIGLYRNKAKNIKACAQQLIERFDGQVPTSREELMSLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPK 189
K ANV+L AFGIP I VDTH+ R+S R+ + T +VE++L+R +P +
Sbjct: 121 KTANVVLGDAFGIPAIAVDTHVERVSKRLRICKLDATVMEVEETLMRKVPQE 172
>gi|223939321|ref|ZP_03631201.1| HhH-GPD family protein [bacterium Ellin514]
gi|223892034|gb|EEF58515.1| HhH-GPD family protein [bacterium Ellin514]
Length = 239
Score = 80.0 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 9/213 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+E+ S W E + N + LIV+ LL ++ V I
Sbjct: 19 REIAIFQKKLSHWWRVNAREFPWRNDNATSYHLIVSELLLQRTRAETVELYWPKFINIFS 78
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ EKK+ ++ +G+ R+++ I +L+ + E + LPG+G+
Sbjct: 79 DWDTLANTSEKKICKILQPLGLSRQRAPRIKALAVEICTEKGRFPQTQE-DILLLPGVGQ 137
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG----LAPGKTPNKVEQSLLRIIPPKHQYNA 194
AN IL +P +D ++ R+ R L + ++ I+
Sbjct: 138 YIANAILLFVHDVPAPLLDVNMARVLERYFGSRKLVDIRFDPYLQSLSKMIVTNNDPRMI 197
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ ++ G VCK+ P C C + + C+ +
Sbjct: 198 NWAILDLGALVCKSANPICNQCPLKSNCRHFHR 230
>gi|326477245|gb|EGE01255.1| DNA repair protein Ntg1 [Trichophyton equinum CBS 127.97]
Length = 421
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 22 PKELEEIF---YLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNV 66
P + I+ + P+ ELY+ + F ++A++LS+Q+ D
Sbjct: 94 PPNWQAIYDTVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 153
Query: 67 NKATKHLFEI------ADTPQKMLAIGEKK-----------------LQNYIRTIGIYRK 103
L + ++ +K L IR +G +
Sbjct: 154 AATMLRLHTQLTDETSDNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 213
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFR 162
K+ I + + IL ++FD+ IP T+EGL LPG+G K A + +S A+ VD H+ R
Sbjct: 214 KTRYIKATAEILRDKFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHR 273
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--N 220
I+N G KTP +L +P + + LV G+ VC +C C +S
Sbjct: 274 ITNLWGWNKTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTG 333
Query: 221 LC 222
LC
Sbjct: 334 LC 335
>gi|326471890|gb|EGD95899.1| DNA repair protein Ntg1 [Trichophyton tonsurans CBS 112818]
Length = 421
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 22 PKELEEIF---YLFSLKWPSPK------GELYYVN------HFTLIVAVLLSAQSTDVNV 66
P + I+ + P+ ELY+ + F ++A++LS+Q+ D
Sbjct: 94 PPNWQAIYDTVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 153
Query: 67 NKATKHLFEI------ADTPQKMLAIGEKK-----------------LQNYIRTIGIYRK 103
L + ++ +K L IR +G +
Sbjct: 154 AATMLRLHTQLTDETSDNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 213
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFR 162
K+ I + + IL ++FD+ IP T+EGL LPG+G K A + +S A+ VD H+ R
Sbjct: 214 KTRYIKATAEILRDKFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHR 273
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--N 220
I+N G KTP +L +P + + LV G+ VC +C C +S
Sbjct: 274 ITNLWGWNKTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTG 333
Query: 221 LC 222
LC
Sbjct: 334 LC 335
>gi|170751703|ref|YP_001757963.1| helix-hairpin-helix DNA-binding motif-containing protein
[Methylobacterium radiotolerans JCM 2831]
gi|170658225|gb|ACB27280.1| helix-hairpin-helix motif protein [Methylobacterium radiotolerans
JCM 2831]
Length = 253
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 94/239 (39%), Gaps = 15/239 (6%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
++ + + ++ + + P + ++ + +V+ LLS ++
Sbjct: 9 ATAPRPRRKPTPAVTDPALAEKALAVHARLCPVYGCPIPYFHSLDPVSELVSSLLSHRTR 68
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--- 119
+ +A K L + ++ +++ I + K+ I + L +
Sbjct: 69 NAESGRAFKALRARFRDWEAVIDADVPEIEAAIAGVTWPELKAPRIRDVLRALRDRCGGL 128
Query: 120 ------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLA-- 170
D ++ L +PG+G K + +LS + + VD+H R++ R+GL
Sbjct: 129 DLAFLADMEVEAARVWLQAIPGVGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRLGLIGK 188
Query: 171 ---PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
G + + L + Y+ H L+LHG+ VC R+P C C++ +LC +
Sbjct: 189 TVDVGPSHPILRAQLPADWSAQDLYDNHEILMLHGQKVCHHRRPACGRCVLVDLCPSAR 247
>gi|114776452|ref|ZP_01451497.1| endonuclease III, putative (nth2) [Mariprofundus ferrooxydans PV-1]
gi|114553282|gb|EAU55680.1| endonuclease III, putative (nth2) [Mariprofundus ferrooxydans PV-1]
Length = 227
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 12/207 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLA 85
E++ + P+ F +++ +L+ ++ NV KA +L + + A
Sbjct: 8 EVYERLFTAYG-PQHWWPAETPFEVMLGAILTQNTSWQNVEKAITNLKAHDMLHCESIAA 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLTRLPGIGRK 139
+L IR+ G Y +K+ + S + + + L L GIG +
Sbjct: 67 SNLHQLAEMIRSSGSYLQKARYLQHFSQFYVQNGQRSGLINRPQSLLRKQLLALYGIGPE 126
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLRIIPPKHQ--YNAHY 196
A+ IL AF P VD + R+ R+ + ++ + +P H
Sbjct: 127 TADSILLYAFDKPVFVVDAYTKRLFTRLEHFDHQLAYDNIQHYFQQRLPESLPLFQEFHA 186
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
+V H + C+ KP C C + + C
Sbjct: 187 LIVEHAKRYCR-TKPLCSQCPLLDHCP 212
>gi|163848464|ref|YP_001636508.1| helix-hairpin-helix DNA-binding motif-containing protein
[Chloroflexus aurantiacus J-10-fl]
gi|222526393|ref|YP_002570864.1| helix-turn-helix domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163669753|gb|ABY36119.1| helix-hairpin-helix motif [Chloroflexus aurantiacus J-10-fl]
gi|222450272|gb|ACM54538.1| helix-hairpin-helix motif protein [Chloroflexus sp. Y-400-fl]
Length = 227
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 79/213 (37%), Gaps = 9/213 (4%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
++ E++ + + + + +++A +L ++ V +
Sbjct: 7 LPFSSDEVQALRVALHQWGAEHVRSFPWRQTTDPYHILLAEILLHRTQVKQVVPVYEAFL 66
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ + + + ++G+ +S + + + +P+ E L LP
Sbjct: 67 ARYPDLTSLSQASQGDIYQMLGSLGL-TWRSRLFYEMLQAIATRYHGNVPRRKEDLLSLP 125
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----GKTPNKVEQSLLRIIPPKH 190
GI A+ + A+ P + +DT+ RI+ R+ P + + +L ++ +
Sbjct: 126 GISDYIASAVRCFAWNEPEVLLDTNTVRITGRLLGWPVRDSSRRSARFRHALASLLDHEQ 185
Query: 191 QYNAHYWLVLHGRYVC-KARKPQCQSCIISNLC 222
+Y L+ VC R+P C C ++ C
Sbjct: 186 PRMFNYALLDLAHLVCLTRRQPLCAQCPLNTWC 218
>gi|308812275|ref|XP_003083445.1| Endonuclease III (ISS) [Ostreococcus tauri]
gi|116055325|emb|CAL57721.1| Endonuclease III (ISS) [Ostreococcus tauri]
Length = 296
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD----TPQKMLAIGEKKLQNYIRTIGIYRKK 104
F +VA L+S Q D +A + L + T +++ + L++ ++T+ ++R K
Sbjct: 101 FQCLVAALMSVQCLDRVALRAFQRLRDDHMSGDVTIERVRKMDRATLESALKTLNLWRAK 160
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-----IGVDTH 159
++ I S + +F + +P+T+ L LPG+G K A+++ S+++ + + VDTH
Sbjct: 161 AKYIKECSEAIHFKFRDTVPRTVGALKTLPGVGDKLAHLVASVSYDESSAQYAGVVVDTH 220
Query: 160 IFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
+ R+S R+G P +V L + L+ G+ VC +R P C C +
Sbjct: 221 VQRVSRRLGWVGKCDDPERVRMKLQARVHRDDWEELTLGLIALGQNVCHSRNPACDRCPL 280
Query: 219 SNLCKR 224
C
Sbjct: 281 RTRCPA 286
>gi|312958435|ref|ZP_07772955.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens WH6]
gi|311286978|gb|EFQ65539.1| A/G-specific adenine glycosylase [Pseudomonas fluorescens WH6]
Length = 317
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 6/173 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V T + + A E ++ + +G Y ++ N+ + I++
Sbjct: 1 MLQQTQVSTVLNYFDRFMASLPTVEALAAAPEDEVLHLWTGLGYYT-RARNLQKTAKIIV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-- 174
E+ + P+ +E LT LPGIG A I S++ G+ +D ++ R+ R G
Sbjct: 60 AEYGGEFPRDVEKLTELPGIGLSTAGAIASLSMGLRAPILDGNVKRVLARFTAQEGYPGE 119
Query: 175 ---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ + R P ++ G +C KP C C + C+
Sbjct: 120 PKVAKQLWATAERFTPHDRVNAYTQAMMDMGATLCTRSKPSCLLCPLEKGCEA 172
>gi|254461134|ref|ZP_05074550.1| A/G-specific adenine glycosylase [Rhodobacterales bacterium
HTCC2083]
gi|206677723|gb|EDZ42210.1| A/G-specific adenine glycosylase [Rhodobacteraceae bacterium
HTCC2083]
Length = 282
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
Y ++ N++ + ++ +E+D P T L LPGIG A + S+A+ +P +D ++
Sbjct: 9 YYARARNLLKCARVIADEYDGIFPNTHAELLTLPGIGPYTAAAVSSIAYDLPETVLDGNV 68
Query: 161 FRISNRIGLAPGKTP---NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
R+ +R+ P ++ + + P K + ++ G +C + P C C
Sbjct: 69 ERVMSRLYDIHTPLPTSKPELMELAQALTPQKRAGDYAQAVMDLGATICTPKNPACGLCP 128
Query: 218 ISNLC 222
C
Sbjct: 129 WRKPC 133
>gi|114320065|ref|YP_741748.1| HhH-GPD family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226459|gb|ABI56258.1| HhH-GPD family protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 221
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 12/211 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L I+ F + V +L+ + NV KA L E +
Sbjct: 9 RLHAIYRALRDHHGHLD-WWPGNGCFEIAVGAVLTQNTAWSNVEKAITRLRERRLLAPEA 67
Query: 84 LAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDN------KIPQTLEGLTRLPGI 136
+ ++ L IR G + K+ +++L + + L + G+
Sbjct: 68 MLDCPQEALAEVIRPSGYFNVKARRLLALCRAWQDAGGEAGLAALDTATLRQRLLAVHGV 127
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPK--HQYN 193
GR+ A+ IL AF P +D + RI R+GL G + + + R + P +
Sbjct: 128 GRETADDILLYAFERPVFVIDAYTRRIFARLGLVDGDPGYEPLRAAFERALGPDVALYND 187
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V G+ C+ R P+C C +++ C
Sbjct: 188 YHAQIVALGKATCRPR-PRCGVCPLADRCPS 217
>gi|154508051|ref|ZP_02043693.1| hypothetical protein ACTODO_00541 [Actinomyces odontolyticus ATCC
17982]
gi|153797685|gb|EDN80105.1| hypothetical protein ACTODO_00541 [Actinomyces odontolyticus ATCC
17982]
Length = 278
Score = 79.6 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 8/183 (4%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + +V ++S Q+ V E TP + A + +G +
Sbjct: 7 SDWGTLVFEIMSQQTPIARVQPIWLEWMERWPTPADVAAASSADIIVAWANLGYPSRALR 66
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + ++ + D ++P +L+ LT LPG+G A+ +L+ GI +DT++ R+ R
Sbjct: 67 -VKACAAAIVEKHDGEVPLSLKELTLLPGVGTYTASALLAFRHGIRVPVLDTNVRRVLVR 125
Query: 167 IGLAPGKTPNKV-EQSLLRIIPPKHQYNAHYW------LVLHGRYVCKARKPQCQSCIIS 219
P+ ++ + H+ L+ G VC P C C I
Sbjct: 126 FLDGREFPPHTTPSKAETMRADAILPEDGHHAAEVSLSLMEFGALVCTQLNPSCDECTIH 185
Query: 220 NLC 222
+ C
Sbjct: 186 DNC 188
>gi|257389114|ref|YP_003178887.1| DNA-(apurinic or apyrimidinic site) lyase [Halomicrobium mukohataei
DSM 12286]
gi|257171421|gb|ACV49180.1| DNA-(apurinic or apyrimidinic site) lyase [Halomicrobium mukohataei
DSM 12286]
Length = 270
Score = 79.2 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-----D 78
E + + + F +V +LS ++D A L E D
Sbjct: 32 RAEAVVDRLGELY--WTKAYGGRDAFECLVRTILSQNTSDKASQPAHDALMERYGADGED 89
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL-------- 130
+ +++L I+ G++ +KSE I+ L+ + E+
Sbjct: 90 LAATLADADQQRLAETIQPAGLHNQKSETIVRLAGRVCEEYGFGAEFDAFVRGGDPGDVR 149
Query: 131 ---TRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI 185
+ G+G K A+ +L A G VDTH+ RI+ R+GLAP ++ V +L
Sbjct: 150 SALLDMKGVGPKTADCVLLFAGGRGGVFPVDTHVHRIARRMGLAPADADHEGVRAALEDD 209
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCK 223
IP + H ++ GR C ARKP C ++C +++ C+
Sbjct: 210 IPAEKCGFGHTAMIQFGREYCSARKPACLDDPEACPLADQCE 251
>gi|159042442|ref|YP_001541694.1| DNA-(apurinic or apyrimidinic site) lyase [Caldivirga
maquilingensis IC-167]
gi|157921277|gb|ABW02704.1| DNA-(apurinic or apyrimidinic site) lyase [Caldivirga
maquilingensis IC-167]
Length = 230
Score = 79.2 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
F +VAV+L+ ++D + + L E + TP +L++ + +L+N +R IG +R+++
Sbjct: 36 FEGLVAVMLTQNTSDKVATRVYERLKERLGSITPNTILSLSKSELENILRPIGSFRQRAR 95
Query: 107 NIISLSHILINEFD--------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
+I L++ + +++ + L LPG+G K A+V+L + G P VDT
Sbjct: 96 RLIELANTVNEKYNGSLEFIRGMGTDEARRTLMNLPGVGPKTADVVL-LNLGKPVFPVDT 154
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
HI RIS+R+G+ G KV ++++ P H L+ GR +C++R+P C+ C +
Sbjct: 155 HIMRISHRLGVMGGY--EKVSAFWIKLLKPNEYLMVHLGLIAFGRAICRSRRPLCEHCPL 212
Query: 219 SNLCKRI 225
CK
Sbjct: 213 RVKCKYY 219
>gi|84389411|ref|ZP_00991217.1| DNA-lyase [Vibrio splendidus 12B01]
gi|84376926|gb|EAP93799.1| DNA-lyase [Vibrio splendidus 12B01]
Length = 225
Score = 79.2 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 78/206 (37%), Gaps = 10/206 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ +F + + + +++ +L + N KA +L + D
Sbjct: 15 ILSVFDTLEQHYGY-FDWWQREDPYEIVLGAILVQNTNWKNAEKALTNLGDKCDPRSVAE 73
Query: 85 AIGEKKLQNYIRTIGIYRKKSE------NIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ Q + +K + + + + + Q + L + GIG
Sbjct: 74 MGLDDLAQKIRSSGYYNQKAIKLKAVTEWFLKYQYDMSVVREQDKNQLRKELLEVKGIGG 133
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQYNAHY 196
+ A+ IL A G P+ +D + RI R GL K+ K + +IP K + H
Sbjct: 134 ETADAILVYAIGKPSFVIDAYARRIFTRNGLDVPKSYEKFRTLMESVIPLDTKKYGHYHG 193
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
LV HG+ C KP+C+ C ++ C
Sbjct: 194 LLVEHGQQYCNP-KPKCEHCPLNQSC 218
>gi|215448010|ref|ZP_03434762.1| ultraviolet N-glycosylase/AP lyase [Mycobacterium tuberculosis T85]
gi|289759830|ref|ZP_06519208.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289715394|gb|EFD79406.1| predicted protein [Mycobacterium tuberculosis T85]
Length = 132
Score = 79.2 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
H R+ R + P KVEQ++ +I K + ++ HGR VC AR+P C C++
Sbjct: 38 HFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVL 97
Query: 219 SNLCKRI 225
+ C
Sbjct: 98 AKDCPSF 104
>gi|320530552|ref|ZP_08031609.1| putative A/G-specific adenine glycosylase [Selenomonas artemidis
F0399]
gi|320137225|gb|EFW29150.1| putative A/G-specific adenine glycosylase [Selenomonas artemidis
F0399]
Length = 366
Score = 79.2 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 12/196 (6%)
Query: 37 PSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
P + +L + + + + ++ ++ Q+ V T + + + + L
Sbjct: 27 PDTR-DLPWRDEPAPYHVWISEIMLQQTRASVVRGYYLRFLAALPTVRDLADVDDDALMK 85
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+ +G Y ++ N+ + ++ + +P + L LPGIGR A+ I S A+G P
Sbjct: 86 LWQGLGYYS-RARNLKRAAQAIVEKHGGDLPDDFDALLALPGIGRYTASAISSFAYGRPC 144
Query: 154 IGVDTHI-----FRISNRIGLAPGKTPNKVEQSLLRIIPP-KHQYNAHYWLVLHGRYVCK 207
VD + +N I +A + +E+SL P K + + G VC
Sbjct: 145 PAVDGNFLRVAARVTANSIDIAKDASKRALEESLRPCYPTGKDAGLLNEAFMDLGATVCL 204
Query: 208 AR-KPQCQSCIISNLC 222
P C +C LC
Sbjct: 205 PNGAPLCHACPAVRLC 220
>gi|296392875|ref|YP_003657759.1| HhH-GPD family protein [Segniliparus rotundus DSM 44985]
gi|296180022|gb|ADG96928.1| HhH-GPD family protein [Segniliparus rotundus DSM 44985]
Length = 315
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 10/203 (4%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ L + + ++++ ++ Q+ V + +P + A
Sbjct: 26 LIRWFGEHARALPWREPGVTPWGVLLSEIMLQQTQVDRVRPIWEEWVCRWPSPAALAAQP 85
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ +G R+ + + S +++ E D ++P L+ L LPG+G A +L+
Sbjct: 86 LAEALRAWGRLGYPRRAAR-LHEASRVIVAEHDGEVPDELDALLALPGVGAYTARAVLAF 144
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIPPK--HQYNAHYWLVLHGR 203
AFG VD ++ R+ R+ P + + L ++P L+ G+
Sbjct: 145 AFGQRAPVVDVNVRRVLCRVRRGEADGPARAQDLPDTLALLPQDPAAASALSAALMELGQ 204
Query: 204 YVCKARKPQCQSCIISNLCKRIK 226
VC P C +C + C+ +
Sbjct: 205 TVCLPHAPNCAACPVHP-CRWAR 226
>gi|300088667|ref|YP_003759189.1| HhH-GPD family protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528400|gb|ADJ26868.1| HhH-GPD family protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 224
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 19/214 (8%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
I+ K+ P+ F +++ +L+ + NV KA L + ++ +
Sbjct: 14 IYERLFGKYG-PQDWWPADTAFEMMIGAILTQSTAWSNVEKAITGLKSAGALSAAQIRRM 72
Query: 87 GEKKLQNYIRTIGIYRKKS-------ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
++L IR+ G Y K+ + + + + D + L + G+G +
Sbjct: 73 RPEELAPVIRSSGYYNAKASKLKALADWLAGYDDDIESLKDRDPAEFRRELLAVHGVGPE 132
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH------QYN 193
A+ IL A +P +D + R+ +R+G+ P P R+
Sbjct: 133 TADSILLYALDVPVFVIDAYTRRLFSRLGIVP---PRDTYDEWQRLFETNLEQQAGLFNE 189
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + VC++R P C C ++ C+ +K+
Sbjct: 190 YHALIVRHAKEVCRSR-PDCAECCLAGECRYLKR 222
>gi|114566352|ref|YP_753506.1| HhH-GPD [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337287|gb|ABI68135.1| DNA-3-methyladenine glycosylase III [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 222
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 13/220 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IAD 78
++L I++ + P+G + +I+ +L+ + NV KA L E
Sbjct: 1 MKQQKLMAIYHKLFEHFG-PRGWWPGESRLEIILGAILTQAVSWKNVEKAIAALKEARLL 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENII--------SLSHILINEFDNKIPQTLEGL 130
+ +I E++L ++I+ +R+K+ + + + F +PQ L
Sbjct: 60 DFPALRSIAEEELADFIKPALYHRQKARRLKILLDFIAENYGGDIDLMFSEPLPQIRARL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK 189
L GIG + A+ IL A P VD + RI R+G K K++ + +P
Sbjct: 120 LALWGIGPETADSILLYAGNYPVFVVDAYTIRIFTRLGWVEDKCSYEKMQGLMQNHLPVD 179
Query: 190 H--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H LV G CK +K CQ C ++ C I++
Sbjct: 180 TQIYNEYHALLVALGANYCKKKKALCQECPLAEYCPYIRK 219
>gi|320588628|gb|EFX01096.1| DNA repair protein [Grosmannia clavigera kw1407]
Length = 461
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIAD----------TPQKMLAIGEKKLQNYIRTI 98
F +VA++LS+Q+ D A L + MLA+ +L I +
Sbjct: 217 FHTLVALMLSSQTKDTVNAVAMARLQAELPAHRPGAPAGLNLENMLAVEPAELNRLIWQV 276
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI---LSMAFGIPTIG 155
G + K+ + + L + +D IP T +GL LPG+G K A + + IG
Sbjct: 277 GFHNNKTRYLKQAAEQLRDRWDGDIPPTADGLMALPGVGPKMAYLCLSAEHGWNRVEGIG 336
Query: 156 VDTHIFRISNRIGLAPG-----KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
VD H+ RI+N G KTP +L +P ++ LV G+ VC +
Sbjct: 337 VDVHVHRITNLWGWQRPGSPAAKTPESTRLALQSWLPRDRWKELNWLLVGFGQKVCLPQG 396
Query: 211 PQCQSCI--ISNLCKR 224
+C C + LC
Sbjct: 397 AKCGVCTVGLRGLCPA 412
>gi|257388060|ref|YP_003177833.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
gi|257170367|gb|ACV48126.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
Length = 236
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 20 YTPKELEEIFYLFSLKW-PSPKGELYYVNH-------FTLIVAVLLSAQSTDVNVNKATK 71
+T ++ E+ + P + E + + +V +LS D N +A++
Sbjct: 7 WTAADVRELHDDLVSLYEPVAQTEAHGADADAEPGEGVRQLVTTILSQNVADENTRRASE 66
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL---- 127
LFE + + A +L IR G+ +K+ I + E
Sbjct: 67 SLFETYEDFAAIEAADHDELAETIRVAGLPDQKAARIQRALTAIREETGGAYSLAFLDAL 126
Query: 128 ------EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQ 180
LT + G+G K A+V+L+ FG PT+ VDTH+ R+S R GL P N+
Sbjct: 127 PTAEAKAWLTDIKGVGPKTASVVLNFHFGKPTMAVDTHVERVSKRFGLVPEDASNERAHD 186
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+L ++P + Y H L+ HGR C AR P C + +C+R
Sbjct: 187 ALDAVVPDELTYPLHVLLIRHGRTHCSARNPDCD----NPVCERY 227
>gi|330889573|gb|EGH22234.1| endonuclease III [Pseudomonas syringae pv. mori str. 301020]
Length = 131
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 82/125 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ +EIF P PK EL Y F L++AV+LSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ + +G + L YI+TIG+Y K++N+I +L+ ++++PQT E L LPG+GRK
Sbjct: 61 PQAIYDLGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNSEVPQTREALEALPGVGRK 120
Query: 140 GANVI 144
ANV+
Sbjct: 121 TANVV 125
>gi|42566730|ref|NP_193010.2| adenine-DNA glycosylase-related / MYH-related [Arabidopsis
thaliana]
gi|332657774|gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana]
Length = 630
Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 36/223 (16%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNK 68
L++ E ++I + K +L + N + + V+ ++ Q+ V K
Sbjct: 122 LFSENETQKIRMGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMK 181
Query: 69 ATKHLFEIADTPQ-------------------KMLAIGEKKLQNYIRTIGIYRKKSENII 109
K + T + +K++ +G YR+ +
Sbjct: 182 YYKRWMQKWPTIYDLGQASLENLIVSRSRELSFLRGNEKKEVNEMWAGLGYYRRARFLLE 241
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL 169
++ + L ++ GIG+ A I S+AF VD ++ R+ R+
Sbjct: 242 GAKMVVAGTEGFPNQAS--SLMKVKGIGQYTAGAIASIAFNEAVPVVDGNVIRVLARLKA 299
Query: 170 APGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
++ + +++ P + + L+ G +C
Sbjct: 300 ISANPKDRLTARNFWKLAAQLVDPSRPGDFNQSLMELGATLCT 342
>gi|56205991|emb|CAI21721.1| mutY homolog (E. coli) [Homo sapiens]
Length = 215
Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G Y + ++ + LPG+GR A I S+AF
Sbjct: 13 EVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAF 72
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-----KVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
G T VD ++ R+ R+ + ++ +++ P + + + G
Sbjct: 73 GQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGAT 132
Query: 205 VCKARKPQCQSCIISNLCKRIKQ 227
VC ++P C C + +LC+ ++
Sbjct: 133 VCTPQRPLCSQCPVESLCRARQR 155
>gi|296806475|ref|XP_002844047.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
gi|238845349|gb|EEQ35011.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
Length = 371
Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 63/282 (22%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEI------------------------FYLFSLKW 36
+++ K +P + K EEI
Sbjct: 48 LLTETKKRKKPTRTPRAAVKKIKSEEEIKVKREDEEEEKRTGPPNWEAIYETVKRMRESN 107
Query: 37 PSPK------GELYYVN------HFTLIVAVLLSAQSTDVNVNKATKHLFEI-------- 76
P+ ELY+ + F ++A++LS+Q+ D A + L
Sbjct: 108 PTAPVDTMGCSELYWRSSSPRDRRFQTLIALMLSSQTKDTVTAAAMQKLHTQLADETADD 167
Query: 77 -ADTPQKMLAIGEK-----------------KLQNYIRTIGIYRKKSENIISLSHILINE 118
++ + +L I +G + K++ I + + IL +E
Sbjct: 168 KDKPVSEVWDHDHQAAPSTLTLENVLAVSPARLNELIGAVGFHNNKTKYIKATAEILRDE 227
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNK 177
F + IP T++GLTRLPG+G K A + +S A+ VD H+ RI+N G KTP
Sbjct: 228 FGSDIPSTIQGLTRLPGVGPKMAYLCMSSAWNRHEGIGVDVHVHRITNLWGWNKTKTPEA 287
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+L +P + + LV G+ VC +C C +S
Sbjct: 288 TRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLS 329
>gi|297625112|ref|YP_003706546.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
gi|297166292|gb|ADI16003.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
Length = 241
Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 16/239 (6%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGEL-YYVNHFTLIVAVLLSAQ 60
++ ++P ++ + ++ + EL +V+ +LS +
Sbjct: 1 MAEAPPHEPDPDAPHEAEALREKALWTLRRLTERYG--QRELAPRREPMHELVSTILSQR 58
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+T N +A + ++E + + +L I K+ NI ++
Sbjct: 59 TTWQNEERAYRRMWERFGSWVGVRDAPVAELAEAIAPSNYPEVKAPNIQKTVARVLERSP 118
Query: 121 NKIPQTLE---------GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
L LT LPG+G K A+++L F P + VDTH++R+S R+GL
Sbjct: 119 EADLSFLRDLPLDEALAWLTSLPGVGLKTASLVLLFCFARPVLPVDTHVYRVSQRVGLLS 178
Query: 172 GKTPNKVEQSLLRIIPPKH----QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + YN H L++HG+ +C R P+C C ++ C+ +
Sbjct: 179 ARVKTPTAAHAPLLALLPPEPAVLYNFHMALLVHGQRLCVWRAPRCSRCPLTARCRWFR 237
>gi|15805952|ref|NP_294652.1| endonuclease III [Deinococcus radiodurans R1]
gi|6458651|gb|AAF10505.1|AE001945_9 endonuclease III, putative [Deinococcus radiodurans R1]
Length = 338
Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 80/242 (33%), Gaps = 25/242 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW-PSPKGELYYVNHFTLIVAVLLSAQS 61
+S KS +P E + P + + ++ +LS Q+
Sbjct: 83 ASSKSRPLSEQNPPPV-----WFGEYLSRLRDTYAPELPPPRQFPDPLGGLIRTILSQQN 137
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
T + + L + L G ++ +++ G + + + + +
Sbjct: 138 TRRVAQRQWEVLTATYPQWEAALLDGPDGIEATLKSAGGGLSRMKADYIYGILAHLQEHH 197
Query: 122 KIPQTLEGLTR----------------LPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
LPG+G K ++L P + VD ++ R +
Sbjct: 198 GGLSLRFLREFPHTPEGHEQARQALAALPGVGHKTVALVLLFDLRRPAMPVDGNMERAAK 257
Query: 166 RIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWL--VLHGRYVCKARKPQCQSCIISNLC 222
R+ L P +KVE+ ++P + + V HGR C+++ P C C + C
Sbjct: 258 RLELVPAAWNSHKVERWYAEVMPADWETRFALHISGVRHGRDTCRSKHPLCPQCPLREFC 317
Query: 223 KR 224
Sbjct: 318 PS 319
>gi|222823175|ref|YP_002574748.1| A/G-specific adenine glycosylase [Campylobacter lari RM2100]
gi|222538396|gb|ACM63497.1| A/G-specific adenine glycosylase [Campylobacter lari RM2100]
Length = 342
Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 75/200 (37%), Gaps = 8/200 (4%)
Query: 30 YLFSLKWPSPKGE------LYYVNHFTLIVAVLLSAQSTDVNV-NKATKHLFEIADTPQK 82
+ ++ E + + V+ ++ Q+ +V + +
Sbjct: 23 RILHEEYRKYGSEDDLKKLKNIDIAYAVYVSEIMLQQTQVKSVLQNYYFQFLAQFPSLKA 82
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ E ++ + +G Y ++ N+ + I + EFD ++P ++ L +LPGIG A
Sbjct: 83 LSMASEDEVLKAWQGLGYYT-RARNMHKCAKICVQEFDARLPLEIKELQKLPGIGEYTAG 141
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
I F VD +I R+ +R + Q + + + + L+ G
Sbjct: 142 AIACFGFLQAKSFVDANIKRVLSRFYGLQNPNSKILVQKAKEFLNYNNAFEHNQALLDIG 201
Query: 203 RYVCKARKPQCQSCIISNLC 222
VC + +C+ C + C
Sbjct: 202 ALVCLPKNAKCEICPLKCFC 221
>gi|313231808|emb|CBY08920.1| unnamed protein product [Oikopleura dioica]
Length = 303
Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--LQNYIRTIGIYRKKSE 106
F +++++L+S+Q+ D A K L E + A L + I +G ++ KS+
Sbjct: 113 FQILISLLMSSQTKDEINAGAMKRLNEHFKSFNAEKAANADTALLSSLITPVGFHKTKSK 172
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISN 165
NI+ + I +++ + IP T+E L +LPGIG K + LS A+G VD H+ RI
Sbjct: 173 NIVKVGEICRDQYSSDIPDTIEDLVKLPGIGPKMGYLALSCAWGKNEGIGVDVHVHRICQ 232
Query: 166 RIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
R+ K P L +P + + LV G+ +C A+ P C +C+ +C +
Sbjct: 233 RLRFTKKPKNPEATRNQLESWLPKEKWQEINKLLVGFGQQICSAKSPNCTNCLNDPICPK 292
>gi|169853989|ref|XP_001833672.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
gi|116505322|gb|EAU88217.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
Length = 450
Score = 78.0 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 26/251 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL----------KWPSPKGELYYVNH---- 48
+ KKS + P +E++ + + +
Sbjct: 133 TKKKSQKPIPQALAKPHPAPDNWKEVYDSIKKMRESIVAPVDTMGCAQAQYKETDPKNQR 192
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEI---ADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
F +V+++LS+Q+ D + A L A + + ++ + I +G +R+K+
Sbjct: 193 FATLVSLMLSSQTKDEVTDAAVTKLRTALGGAISVEGIINAPSSLISEAIAKVGFWRRKT 252
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRIS 164
+ + + L EF+ +P+T++ L LPG+G K A + L +A+ + IGVD H+ RIS
Sbjct: 253 DYLKQTAAKLQEEFEGDVPKTVDELCSLPGVGPKMAFLCLQVAWNLNLGIGVDVHVHRIS 312
Query: 165 NRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII---- 218
NR+G P K P + +L +P + + LV G+ VC P+C C +
Sbjct: 313 NRLGWHRKPTKDPEETRLNLQSWLPSELHQEINPLLVGFGQVVCTPVNPKCDQCTLSGSS 372
Query: 219 --SNLCKRIKQ 227
LC ++
Sbjct: 373 TSKALCPSARK 383
>gi|118430904|ref|NP_147001.2| endonuclease III [Aeropyrum pernix K1]
gi|116062229|dbj|BAA79061.2| endonuclease III [Aeropyrum pernix K1]
Length = 229
Score = 78.0 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AIGEKKLQNYIRTIGIYRKKS 105
N F ++ AV+LS + D N +A L + + + L IR G+ R+K+
Sbjct: 41 NPFAVLAAVVLSQNTNDKNSIRAYLKLRQTIGVTPEAILEASYDDLVEAIREAGLPRQKA 100
Query: 106 ENIISLSHILINEFDNKI------PQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDT 158
+ +L+ ++ + E L + GIG K A+V LS+ P VDT
Sbjct: 101 SALKALAEAVVRWGGENYLLKAPPEELREKLMSIRGIGPKTADVFLSLVRKAPGVFAVDT 160
Query: 159 HIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
H R++ R GL K +++ ++L P + AH ++ GR CKAR+P+C+ C
Sbjct: 161 HAARVARRWGLVGEKAGYDEISKALYNYFGPGNSEEAHRLIIALGRTYCKARRPRCRECP 220
Query: 218 ISNLCKRIK 226
+ ++C +
Sbjct: 221 LRSVCPSAQ 229
>gi|298242385|ref|ZP_06966192.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
gi|297555439|gb|EFH89303.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
Length = 245
Score = 78.0 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 14/216 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ E+ + ++ + +++V +LLS ++ D +L + + +
Sbjct: 26 AKALEVTAKLTEQFGEE--PFSKKDPMSMLVDILLSHRTRDEQTAAGYANLIKRFGSWEG 83
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE---------GLTRL 133
+ K+++ I + K+ I ++ + E N L L R
Sbjct: 84 VRDAPTKEVEETIANVNFPEVKAPRIQAIMRQITEERGNLNLDFLCSLPVEEAAAWLNRF 143
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH-- 190
GIG K +L + +P + VD H+ R S RIGL K T + L ++P
Sbjct: 144 QGIGPKTTACVLLFSCKMPILPVDIHVHRTSIRIGLIGNKVTADNAHTLLQALLPNDART 203
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
YN H L+ G+ +C +P+C C ++ LC +
Sbjct: 204 IYNFHKGLLRLGQRICVYERPRCNQCPLTKLCDYYR 239
>gi|241022842|ref|XP_002406033.1| A/G-specific adenine glycosylase muty, putative [Ixodes scapularis]
gi|215491860|gb|EEC01501.1| A/G-specific adenine glycosylase muty, putative [Ixodes scapularis]
Length = 345
Score = 78.0 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 59/165 (35%), Gaps = 5/165 (3%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + K + T + +++ +G Y++
Sbjct: 26 AYAVWVSEIMLQQTRVTTVIEYYKRWMKKWPTVVDLARASIEEVLQVWAGLGYYQRARRL 85
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
++ + +PG+G A + S+AFG VD ++ R+ +R+
Sbjct: 86 HKGAQKVVRDLGGLFPNTPKHLAREIPGVGCYTAAAVASIAFGHRAGAVDGNVARVYSRM 145
Query: 168 G-----LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
L + + + + P + + ++ G VC
Sbjct: 146 RLLGATLGSSPSERALWAAANEAVCPVRPGDFNQAVMELGARVCT 190
>gi|297618317|ref|YP_003703476.1| HhH-GPD family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297146154|gb|ADI02911.1| HhH-GPD family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 239
Score = 78.0 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 17/220 (7%)
Query: 20 YTPKELE----EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+++ EIF + P+ +IV +L+ NV KA +L E
Sbjct: 1 MLKEDIRTELLEIFQELLDHFG-PRHWWPGETALEVIVGAILTQNVAWNNVEKAINNLKE 59
Query: 76 IADTPQK-MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK--------IPQT 126
++ +KL N IR Y +K+ + + + ++ +++ P+
Sbjct: 60 EGLLSISGLIKTRVEKLGNLIRPARYYNQKAARLKAFAELVNIKYEGDLEKLLSLSTPEL 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRI 185
L L GIG + A+ IL A P VD + RI R L + V+
Sbjct: 120 RMELLALKGIGPETADSILLYAANRPVFVVDAYTKRIFQRLGYLEADVGYSVVQDFFTSN 179
Query: 186 IPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+P + H +V G +C AR+P CQ C + + CK
Sbjct: 180 LPCETYLFNEYHALIVALGNRICLARRPLCQKCPLLHRCK 219
>gi|221056326|ref|XP_002259301.1| a/g-specific adenine glycosylase [Plasmodium knowlesi strain H]
gi|193809372|emb|CAQ40074.1| a/g-specific adenine glycosylase, putative [Plasmodium knowlesi
strain H]
Length = 582
Score = 78.0 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 70/180 (38%), Gaps = 8/180 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + V+ ++ Q+ V T ++ + + +G Y +++N+
Sbjct: 177 YQIYVSEIMLQQTRVHAVVNFYLKWMNKWGTIFELAKSNLDDVLIVWKGLGYYN-RAKNL 235
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ +++++D P L+ L LPGIG + I + I +DT++ RI +RI
Sbjct: 236 LDCCKHVVDKYDGVFPNDLKLLKELPGIGDYTSKAICIHLYNRKDICIDTNVIRIFSRIT 295
Query: 169 LAPGKTPNKVEQSLLRIIP------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + V + + + L+ G +C PQC C ++ C
Sbjct: 296 DTINYSGSTVLTKHCERVSHFLCEGDSNYSDLSQALMDLGSSICNG-TPQCAQCPLNKHC 354
>gi|317037839|ref|XP_001402439.2| hypothetical protein ANI_1_176174 [Aspergillus niger CBS 513.88]
Length = 843
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 42/265 (15%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH----F 49
+ ++K G + + + ++ P+ ELY+ + F
Sbjct: 116 MPARKIKIENGGYSMEPPSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPRDRRF 175
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK------------------- 90
++A++LS+Q+ D A + L + E +
Sbjct: 176 QTLIALMLSSQTKDTVTAVAMQRLHTELGDQSTTIVKKEPEDYDWKPTDQVKDSTLNLEN 235
Query: 91 --------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
L I +G + K++ I + + IL +++D+ IP T L +LPG+G K A
Sbjct: 236 ILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYDSDIPSTAPELMKLPGVGPKMAF 295
Query: 143 VILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ +S A+G VD H+ RI+N G K P + +L +P + + LV
Sbjct: 296 LCMSAAWGKHEGIGVDVHVHRITNLWGWHKTKNPEETRMALESWLPKDKWHEINKLLVGL 355
Query: 202 GRYVCKARKPQCQSCIIS--NLCKR 224
G+ VC +C C ++ LCK
Sbjct: 356 GQTVCLPVARRCGECDLAGTKLCKS 380
>gi|325961773|ref|YP_004239679.1| A/G-specific DNA glycosylase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323467860|gb|ADX71545.1| A/G-specific DNA glycosylase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 272
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 7/172 (4%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V V E TP + + +G R+ + + +
Sbjct: 1 MLQQTPVVRVLPVWHEWLERWPTPAGLAGEPAGEAVRSWGRLGYPRRALRL-HAAAAAIT 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ K+P T L LPG+G A + + A+G VDT+I R+ R+
Sbjct: 60 EKHKGKVPDTYTELLALPGVGSYTAAAVAAFAYGRRETVVDTNIRRVHARLVSGTALPAP 119
Query: 177 KVEQSLLRI----IPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + +R+ +P + ++ G +C AR P+C +C +++LC
Sbjct: 120 ALTAAEMRLAASLLPAADAPSVRWNAAVMELGALLCTARAPKCGACPVNDLC 171
>gi|325283930|ref|YP_004256471.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
gi|324315739|gb|ADY26854.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
Length = 248
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 13/207 (6%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
++ K + +++ +LS ++ + + A L + D ++A +
Sbjct: 32 ERLLAEYGE-KPLVPRREPMHELISTILSQRTNWRDEDAAYAELRMLGD-WDAIVAAPVE 89
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL---------EGLTRLPGIGRKG 140
++ + IR +K+ I + + + L LT LPG+G K
Sbjct: 90 QVAHAIRRSNYPDQKAPRIQATLRAIREKRGGYDLDFLAELPVAEALSWLTDLPGVGVKT 149
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNAHYWL 198
A+++L + P VDTH+ RI+ R+G P ++LL ++P Y+ H L
Sbjct: 150 ASLVLLFNYARPVFPVDTHVHRINTRVGTIPKMGEQTAHRALLTLLPSDPPLLYDLHVNL 209
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ HG+ VC P+C CI+ C
Sbjct: 210 LKHGQQVCTWNNPKCGRCILRERCDAY 236
>gi|302766179|ref|XP_002966510.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
gi|300165930|gb|EFJ32537.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
Length = 240
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM-LAIGEKKLQNYIRTIGIYRKKSENII 109
++++ LLS+Q+ D + A K L E + E +++ I +G Y +K+ +
Sbjct: 45 VLISALLSSQTKDEVNHGAMKRLSERHLLSMEDLSKAEESTIRDAIYPVGFYARKASYLK 104
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRIG 168
++ + + ++ IP+TL L LPGIG K A++++++ + I VDTH+ RI+NR+
Sbjct: 105 KVAALCLEKYQGDIPKTLSELLALPGIGPKMAHLVMNVGWESVHGICVDTHVHRITNRLE 164
Query: 169 LAPGKT-----------PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
P + SL +P + + LV G+ +C +P+C C+
Sbjct: 165 WVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPINPLLVGFGQTICTPLRPRCGDCL 224
Query: 218 ISNLCKR 224
ISNLC
Sbjct: 225 ISNLCPA 231
>gi|320354681|ref|YP_004196020.1| DNA-3-methyladenine glycosylase III [Desulfobulbus propionicus DSM
2032]
gi|320123183|gb|ADW18729.1| DNA-3-methyladenine glycosylase III [Desulfobulbus propionicus DSM
2032]
Length = 214
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
+ T + L+ I+ W P+ F ++V +L+ + NV KA +L +
Sbjct: 1 MTTAERLQLIYERMMAHWG-PQHWWPAETPFEVMVGAVLTQNTAWKNVEKAIANLKGVGL 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEG 129
+ + + A+ L YIR G Y K+ + +L + + + +PQ E
Sbjct: 60 MSLEGLSALPTGLLAEYIRPAGYYNIKAGRLHNLLSTINQQHGGNLQAFLEQPLPQLREQ 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRII-- 186
L + GIGR+ A+ IL A G+P VD + RI R L + +++ + +
Sbjct: 120 LLAIKGIGRETADSILLYAAGLPIFVVDAYTHRILVRHQLIDEECGYEAIQELFMDNLAC 179
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
P+ H LV G CK + P C SC +
Sbjct: 180 DPRLYNEYHALLVRVGNVYCKKKHPDCASCPLQ 212
>gi|115375240|ref|ZP_01462505.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
gi|310820220|ref|YP_003952578.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|115367707|gb|EAU66677.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
gi|309393292|gb|ADO70751.1| Endonuclease III (DNA-(Apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
Length = 237
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L ++ + + P + ++ + +V+ LLS ++ + + +A + L
Sbjct: 7 VLSPREKALRVHERLCAVYGCPIAFFHELDPLSELVSALLSHRTRNADSGRAFRQLRARF 66
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI----------PQTL 127
T + + ++Q I + +K+ + + + + PQ
Sbjct: 67 VTWEAVRDAPCAEVQEAIAPVTWPEQKAPRLQHILREITARRGGDMALDFLGALPVPQAR 126
Query: 128 EGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L LPG+G K + +L + P + VD+H +R++ R+GL + P +LL +
Sbjct: 127 AWLESLPGVGPKTSAAVLLFSRLRRPALPVDSHHYRVAVRLGLLSARIPVGPSHALLAAL 186
Query: 187 PPKHQY-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P+ + H L+LHG+ C + P C C + LC ++
Sbjct: 187 LPQEWGAQQVYDHHEVLMLHGQRCCYHQSPACGRCPVLELCPHGQE 232
>gi|302801191|ref|XP_002982352.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
gi|300149944|gb|EFJ16597.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
Length = 240
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM-LAIGEKKLQNYIRTIGIYRKKSENII 109
++++ LLS+Q+ D + A K L E + E +++ I +G Y +K+ +
Sbjct: 45 VLISALLSSQTKDEVNHGAMKRLSERHLLSMEDLSKAEESTIRDAIYPVGFYARKASYLK 104
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRIG 168
++ + + ++ IP+TL L LPGIG K A++++++ + I VDTH+ RI+NR+
Sbjct: 105 KVAALCLEKYQGDIPKTLSELLALPGIGPKMAHLVMNVGWESVHGICVDTHVHRITNRLE 164
Query: 169 LAPGKT-----------PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
P + SL +P + + LV G+ +C +P+C C+
Sbjct: 165 WVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPINPLLVGFGQTICTPLRPRCGDCL 224
Query: 218 ISNLCKR 224
ISNLC
Sbjct: 225 ISNLCPA 231
>gi|15897075|ref|NP_341680.1| DNA endonuclease III, (ntH-1) [Sulfolobus solfataricus P2]
gi|284173420|ref|ZP_06387389.1| DNA endonuclease III, (ntH-1) [Sulfolobus solfataricus 98/2]
gi|1707778|emb|CAA69576.1| endonuclease III [Sulfolobus solfataricus P2]
gi|13813246|gb|AAK40470.1| DNA endonuclease III, probable (ntH-1) [Sulfolobus solfataricus P2]
gi|261601730|gb|ACX91333.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus solfataricus
98/2]
Length = 236
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 25 LEEIFYLFSLKWPSPK-------GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
E IF+ S + + L + F ++VA +LS STD + KA L
Sbjct: 5 AETIFHKLSATYIIKEEDFIAYYVWLKTKDCFKVLVATILSQNSTDKSAIKAYLELERKV 64
Query: 78 D-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN------KIPQTLEGL 130
TP+K+ +++ ++ G+YR K++ + +S I++ ++ + L
Sbjct: 65 GVTPEKLSNANLADIESALKISGLYRTKAKRLKEISRIILERYNGLIDSLLNTSNARDEL 124
Query: 131 TRLPGIGRKGANV---ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRII 186
+L GIG K A+V +G VDTHI R+S R+G+ P + +L +
Sbjct: 125 LKLEGIGEKTADVVLLTCYGYYGYKVFPVDTHITRVSKRLGIVPTNAKYSLISSTLKELF 184
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ H+ L+ HGR CKARKP C SCII C+
Sbjct: 185 SAYDLLHLHHMLIAHGRQTCKARKPLCNSCIIKECCEYY 223
>gi|18313897|ref|NP_560564.1| U/G & T/G mismatch specific glycosylase (PA-MIG) [Pyrobaculum
aerophilum str. IM2]
gi|7141252|gb|AAF37270.1|AF222335_1 U/G and T/G mismatch-specific DNA glycosylase [Pyrobaculum
aerophilum]
gi|18161465|gb|AAL64746.1| U/G & T/G mismatch specific glycosylase (Pa-MIG) [Pyrobaculum
aerophilum str. IM2]
Length = 230
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 94/213 (44%), Gaps = 12/213 (5%)
Query: 27 EIFYLFSLKWPS-PKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + +L + + + ++VA LL ++T V + +P +
Sbjct: 14 KFRDAIIKWYREFGEKDLPWRKAGDPWAVLVAALLLRKTTVKQVVDIYREFLRRYPSPAR 73
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ ++++ I+ +G+ ++ + LS L+ F+ +IP + L LPG+G A+
Sbjct: 74 LADASVEEIKAIIQPLGMEHVRATLLKKLSEELVRRFNGQIPCDRDALKSLPGVGDYAAS 133
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQSLLRIIP--PKHQYNAH 195
+L A G P +D ++ R+ R+ T ++ ++P P+ +
Sbjct: 134 EVLLTACGKPEPLLDRNMIRVIERVFGIKSKKRRPHTDRELWNFARSLVPRDPELAKEFN 193
Query: 196 YWLVLHGRYVCKARKPQCQSCII-SNLCKRIKQ 227
+ ++ R VC A+ P+C C + +N+C ++
Sbjct: 194 FGVLDFARKVCTAKSPKCSLCPLANNVCVFYQK 226
>gi|50287173|ref|XP_446016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525323|emb|CAG58940.1| unnamed protein product [Candida glabrata]
Length = 392
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIG 99
F L++AV+LS+Q+ D +A ++ + + I+++G
Sbjct: 151 FQLLIAVMLSSQTKDEITAEAMLNIMRYCLNELHDPNGMTLESVLMMDESIIDEKIKSVG 210
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDT 158
+R+K+ I +L + FD+ +P + + LPG+G K + L A+G I VD
Sbjct: 211 FHRRKATYIYKSVRMLRDNFDSDVPTNVNDMLSLPGVGPKMTYLALQRAWGKMDGICVDV 270
Query: 159 HIFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
H+ R+ KTP+ ++L +P Y + LV G+ +C AR +C
Sbjct: 271 HVDRLCKMWRWVDAKKCKTPDHTRKALQTWLPKCLWYEINTVLVGFGQVICMARGKRCDI 330
Query: 216 CIISNLCKR 224
C+ +++C
Sbjct: 331 CLANDICNA 339
>gi|303390292|ref|XP_003073377.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
gi|303302523|gb|ADM12017.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
Length = 238
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRK----- 103
F ++V++LLS+Q+ D +A + L + + + +
Sbjct: 50 FHILVSLLLSSQTKDEITYEAMERLRTLLPEGGAADGRDCGLTMENVTSSSVGYIDSCIK 109
Query: 104 ----KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDT 158
++ +L I + +P+ ++ L LPGIG K A + ++ A + I VDT
Sbjct: 110 RVGFHTKKAENLKRITEILREKGLPEEMKDLVSLPGIGNKMAILYMNHACGSVVGISVDT 169
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
H+ RISNRIGL K + L +I+P + + LV +G+ VC AR+P+C+ C I
Sbjct: 170 HVHRISNRIGLVKTKDAESTRRELEKIVPKREWETINRVLVGYGQTVCVARRPKCEECCI 229
Query: 219 SNLCKR 224
+ C
Sbjct: 230 RSKCPS 235
>gi|189423447|ref|YP_001950624.1| HhH-GPD family protein [Geobacter lovleyi SZ]
gi|189419706|gb|ACD94104.1| HhH-GPD family protein [Geobacter lovleyi SZ]
Length = 225
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 14/217 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD- 78
K L+ IF ++ P+ F + V +L+ + NV KA +L
Sbjct: 1 MADKRLDRIFTTLLERYG-PRHWWPGETPFEVCVGAILTQNTNWGNVEKAIANLKAADRL 59
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN--------KIPQTLEGL 130
+ + + L IR G + K+ + + + L ++ QT L
Sbjct: 60 SVTGIADLLPAALAALIRPAGYFNVKAVRLQAFTTFLQQQYQGSLDRLFAAPWQQTRTEL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IP 187
+ GIG + A+ IL A P+ VD + RI +R+GL + + +
Sbjct: 120 LAVKGIGPETADSILLYAGHKPSFVVDAYTRRIFSRLGLVDERISYDGLRRHFMDRLTLD 179
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H LV G+ C+ R PQC SC ++ C
Sbjct: 180 TALFNEYHALLVELGKQACRPR-PQCSSCCLAAQCSY 215
>gi|302418820|ref|XP_003007241.1| A/G-specific adenine DNA glycosylase [Verticillium albo-atrum
VaMs.102]
gi|261354843|gb|EEY17271.1| A/G-specific adenine DNA glycosylase [Verticillium albo-atrum
VaMs.102]
Length = 424
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 28/198 (14%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V T Q + A + + R +G Y + + + ++
Sbjct: 1 MLQQTRVAVVIDYWNRWTAKWPTIQDLAAAEPDHVLSAWRGLGYYSRATRIHEAARLVVA 60
Query: 117 NEFDNKIPQTLEGLTR--LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
++ + +PG+GR A I ++ FG VD ++ R+ +R G
Sbjct: 61 DDEMQGLLPQDVAELESKVPGVGRYTAGAISAIVFGHAAPMVDGNVLRVLSRQLGVFGNV 120
Query: 175 P------NKVEQSLLRII-----------------PP--KHQYNAHYWLVLHGRYVCKAR 209
+ + + ++ PP L+ G +C
Sbjct: 121 KTDKTTIDMLWAAADALVKAVASDGDTGGSSRDDQPPVSDRPGRWGQALMELGSTICTP- 179
Query: 210 KPQCQSCIISNLCKRIKQ 227
KP C C I+ C+ +
Sbjct: 180 KPDCAQCPITASCRAYAE 197
>gi|258597336|ref|XP_001347977.2| A/G-specific adenine glycosylase, putative [Plasmodium falciparum
3D7]
gi|254832670|gb|AAN35890.2| A/G-specific adenine glycosylase, putative [Plasmodium falciparum
3D7]
Length = 613
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 8/180 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + ++ ++ Q+ V + + + + +G Y +++N+
Sbjct: 212 YQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYN-RAKNL 270
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ I++++++ P L+ L LPGIG + I + I +DT+I RI +RI
Sbjct: 271 LECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIFSRIT 330
Query: 169 LAPGKTPNKVEQSLLRIIP------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + + + + G VC P C C I+ C
Sbjct: 331 DTINYYNSGTLLKHCEKVSEILCSGESNYSDLSQAFMDLGSSVCN-NSPDCSQCPINKYC 389
>gi|254247181|ref|ZP_04940502.1| A/G-specific DNA glycosylase [Burkholderia cenocepacia PC184]
gi|124871957|gb|EAY63673.1| A/G-specific DNA glycosylase [Burkholderia cenocepacia PC184]
Length = 316
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 64/175 (36%), Gaps = 10/175 (5%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + A + +G Y ++ N+ + +++
Sbjct: 1 MLQQTQVSTVIPYYTRFLDRFPDVAALAAAPSDDVMALWAGLGYYS-RARNLHRCAQVVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
E P T + L LPGIGR A I S A+G +D ++ R+ R+ G
Sbjct: 60 AEHGGVFPATPDALAELPGIGRSTAAAIASFAYGARATILDGNVKRVLARVFGVEGSPGE 119
Query: 177 K-VEQSLLRI----IP----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K VE + + +P P L+ G +C KP C C + C
Sbjct: 120 KRVENDMWALAESLLPDAANPADVSAYTQGLMDLGATLCVRGKPDCARCPFAGDC 174
>gi|226356223|ref|YP_002785963.1| DNA-(apurinic or apyrimidinic site) lyase [Deinococcus deserti
VCD115]
gi|226318213|gb|ACO46209.1| putative DNA-(apurinic or apyrimidinic site) lyase (Endonuclease
III) [Deinococcus deserti VCD115]
Length = 237
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 81/213 (38%), Gaps = 17/213 (7%)
Query: 28 IFYLFSLKW-PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ ++ P P ++ LL Q+T + L + L
Sbjct: 1 MIARLRAEYHPDPPLPRPERQVLDALIRTLLGQQNTSAVATRQFNALKSAYPRWEAALLD 60
Query: 87 GEKKLQNYIRTIG--IYRKKSENIISLSHILINE---------FDNKIPQTLEGLTRLPG 135
G ++ +R G + + K+ I + L + L LPG
Sbjct: 61 GPDGIETVLRAAGGGLAQMKAGYIHGILVHLDERLGTLDLSAVRKLNDQEARTLLEGLPG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQYN- 193
+G K A++IL P + VDT+I RI+ R+ L P + P KVE+ ++ +
Sbjct: 121 VGMKTASLILLFDLLRPALPVDTNIERIAKRLELVPQRWTPEKVERWFDAVV-RRDWAER 179
Query: 194 --AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H V HGR C+ R P+C C++ LC
Sbjct: 180 ATFHVAGVRHGRLTCRPRDPRCDQCVLRGLCPS 212
>gi|76797739|ref|ZP_00780006.1| endonuclease III [Streptococcus agalactiae 18RS21]
gi|76586887|gb|EAO63378.1| endonuclease III [Streptococcus agalactiae 18RS21]
Length = 166
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
K FE P + K+++ YI IG+YR K+ + + LI FD K+P+T
Sbjct: 6 KLHPPFFERFPNPLVLAQADPKEIEPYISKIGLYRNKARFLNQCAKQLIEHFDGKVPRTR 65
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRII 186
+ L L G+GRK ANV++S+ FGIP VDTH+ RI + +P ++E+ ++ ++
Sbjct: 66 QELESLAGVGRKTANVVMSVGFGIPAFAVDTHVTRICKHHQICKQSASPLEIEKRVMEVL 125
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
PP+ AH ++ GR +C + P+C
Sbjct: 126 PPEEWLAAHQSMIYFGRAICHPKNPKCDQ 154
>gi|4586250|emb|CAB40991.1| adenine DNA glycosylase like protein [Arabidopsis thaliana]
gi|7267975|emb|CAB78316.1| adenine DNA glycosylase like protein [Arabidopsis thaliana]
Length = 608
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 56/199 (28%), Gaps = 10/199 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNK 68
L++ E ++I + K +L + N + + V+ ++ Q+ V K
Sbjct: 122 LFSENETQKIRMGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMK 181
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
K + T + + L + + +E + + LE
Sbjct: 182 YYKRWMQKWPTIYDLGQASLENLIVSRSRELSFLRGNEKKEVNEMWAGLGYYRRARFLLE 241
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
G + N S+ ++ + +++ P
Sbjct: 242 GAKMVVAGTEGFPNQASSLMKVKGIGQYTAGAIASIAFNEVSQFHFFQSSMKLAAQLVDP 301
Query: 189 KHQYNAHYWLVLHGRYVCK 207
+ + L+ G +C
Sbjct: 302 SRPGDFNQSLMELGATLCT 320
>gi|238494694|ref|XP_002378583.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
gi|220695233|gb|EED51576.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
Length = 347
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 52/273 (19%)
Query: 4 SKKSDSYQ-----GNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH-- 48
++++ + + G+ + + P+ ELY+ +
Sbjct: 46 TRRAPARKIKDEDGSFKVEPPSNWDTIYATVKKMREANPTAPVDTMGCAELYWRASSPRD 105
Query: 49 --FTLIVAVLLSAQSTDVNVNKATKHLFEI-----ADTPQKMLAIGEKK----------- 90
F +VA++LS+Q+ D A + L A + + E
Sbjct: 106 RRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEKPLR 165
Query: 91 ----------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
L I +G + K++ I + + IL +++ + IP T E L +LP
Sbjct: 166 DSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMKLP 225
Query: 135 GIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G K A + +S A+G VD H+ RI+N G KTP ++L +P +
Sbjct: 226 GVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWNKTKTPEDTRKALESWLPKDKWHE 285
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ LV G+ VC +C C ++ LCK
Sbjct: 286 INKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKS 318
>gi|226291738|gb|EEH47166.1| endonuclease III [Paracoccidioides brasiliensis Pb18]
Length = 474
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q V TK + T + +LA+ +L I+TIG + K++ I + IL +E+
Sbjct: 269 QEMKELVWDHTKQQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEY 328
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKV 178
D+ IP T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP +
Sbjct: 329 DSDIPPTIEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEET 388
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+L +P + + LV G+ VC +C C ++ LCK
Sbjct: 389 RAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCGECELAGSGLCKS 436
Score = 36.4 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE------LYYVN------HFTL 51
++K+ + G + +++ + K P+ + LY+ + F +
Sbjct: 146 ARKTTAADGTVKVEPPLNWEKIYDTVKEMRRKNPTAPVDTMGCSQLYWRSSSPRERRFHI 205
Query: 52 IVAVLLSAQSTDVNVNKATKHLF 74
++A++LS+Q+ D A + L
Sbjct: 206 LIALMLSSQTKDTVTALAMQRLH 228
>gi|167469055|ref|ZP_02333759.1| adenine DNA glycosylase [Yersinia pestis FV-1]
Length = 311
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+ + +G Y ++ N+ + +++ + P T + + LPGIGR A ILS++
Sbjct: 11 DDVLHLWTGLGYYA-RARNLHKAAQMVVEHHQGEFPTTFDQILALPGIGRSTAGAILSLS 69
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGR 203
G +D ++ R+ R G K + Q + P + ++ G
Sbjct: 70 LGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGVGQFNQAMMDLGA 129
Query: 204 YVCKARKPQCQSCIISNLCKRI 225
VC KP+C+ C ++ C
Sbjct: 130 MVCTRSKPKCELCPLNIGCMAY 151
>gi|110667125|ref|YP_656936.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
gi|109624872|emb|CAJ51281.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
Length = 223
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 12/210 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++ E+ P + + ++ +LS D +AT LFE + M
Sbjct: 4 DIRELHRDLVSLHERPD-PAHTTDGVRQLLGTILSQSVADAQTARATHALFEAYPDYRAM 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLS----------HILINEFDNKIPQTLEGLTRL 133
++L + I G+ +K+ I + L+ + LT +
Sbjct: 63 ETAPHEELADIIEVAGLKNQKAARIQRALTAIRKETGGEYTLMFLANQSTEAAQSWLTDI 122
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQY 192
G+G K A+V+L+ F PT VDTH+ R++ R GL NK L ++P +Y
Sbjct: 123 KGVGPKTASVVLNFHFEKPTFAVDTHVERLAKRFGLLDSTASNKRAHTELNELVPDDLKY 182
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ H ++ HGR C A+ P C + + C
Sbjct: 183 SLHVLMITHGREYCTAQSPNCANSVCQTYC 212
>gi|68476685|ref|XP_717635.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
gi|68476832|ref|XP_717561.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439276|gb|EAK98596.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439353|gb|EAK98672.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
Length = 320
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATK-------HLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
F L+++++LS+Q+ D +A K + + +L + E ++ YI+ +G +
Sbjct: 100 FQLLISLMLSSQTKDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFH 159
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHI 160
+K++ I IL+ D IP+T+E + LPG+G K ++L +GI VD H+
Sbjct: 160 NRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIGVDVHL 219
Query: 161 FRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R++ G TP K L +P + + + +V G+ +C R C C +
Sbjct: 220 HRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRAANCDICTL 279
Query: 219 SN--LCKRIKQ 227
+ LCK + +
Sbjct: 280 ARDGLCKGVNK 290
>gi|50310813|ref|XP_455429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644565|emb|CAG98137.1| KLLA0F07711p [Kluyveromyces lactis]
Length = 391
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
L+V+++LS+Q+ D KA ++ E L I ++G
Sbjct: 136 QLLVSLMLSSQTKDEVNAKAMHNIMEYCMEELGDPEGITLGSLLKIEEKILDKEIYSVGF 195
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+ +K+ I + +L ++FD +P T+EG LPG+G K + L ++ VD H
Sbjct: 196 HTRKASYIKKAAVMLRDQFDGDVPTTIEGFMSLPGVGPKMGYLALQKSWAKIDGIGVDVH 255
Query: 160 IFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R++ KTP + L +P Y + LV G+ +C R +C+ C
Sbjct: 256 VDRLAKMWKWVDPKVCKTPEHTRKQLESWLPRSLWYEINPVLVGFGQVLCMPRSKRCELC 315
Query: 217 IISNLCKRIKQ 227
+++++C + +
Sbjct: 316 LVNDICPGVDK 326
>gi|330860947|emb|CBX71224.1| hypothetical protein YEW_GO28090 [Yersinia enterocolitica W22703]
Length = 90
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 64/85 (75%)
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
++L+ AFG PTI VDTHIFR+ NR G APG ++VE LL+++P + + + H+WL+LHG
Sbjct: 1 MVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEAKLLKVVPAEFKLDCHHWLILHG 60
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
RY C ARKP+C SCII +LC+ ++
Sbjct: 61 RYTCIARKPRCGSCIIEDLCEFKEK 85
>gi|7021393|gb|AAF35322.1|AF222908_2 Ntg1 [Candida albicans]
Length = 311
Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATK-------HLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
F L+++++LS+Q+ D +A K + + +L + E ++ YI+ +G +
Sbjct: 100 FQLLISLMLSSQTKDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFH 159
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHI 160
+K++ I IL+ D IP+T+E + LPG+G K ++L +GI VD H+
Sbjct: 160 NRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIGVDVHL 219
Query: 161 FRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R++ G TP K L +P + + + +V G+ +C R C C +
Sbjct: 220 HRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRAANCDICTL 279
Query: 219 SN--LCKRIKQ 227
+ LCK + +
Sbjct: 280 ARDGLCKGVNK 290
>gi|238878754|gb|EEQ42392.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 320
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 12/191 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATK-------HLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
F L+++++LS+Q+ D +A K + + +L + E ++ YI+ +G +
Sbjct: 100 FQLLISLMLSSQTKDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFH 159
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHI 160
+K++ I IL+ IP+T+E + LPG+G K ++L +GI VD H+
Sbjct: 160 NRKAQYIRKTCSILMENHGGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIGVDVHL 219
Query: 161 FRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R++ G TP K L +P + + + +V G+ +C R C C +
Sbjct: 220 HRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRAANCDICTL 279
Query: 219 SN--LCKRIKQ 227
+ LCK + +
Sbjct: 280 ARDGLCKGVNK 290
>gi|145356922|ref|XP_001422672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582915|gb|ABP00989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 76.5 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + + +LS+Q+ D + A L TP+ +L E L + +G +R+K++ +
Sbjct: 60 YLTLTSAMLSSQTRDEINHAAMARLRAHGCTPENVLNTDEDALDAMLNPVGFHRRKAQYL 119
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ + IL++E+D IP ++E L LPG+G K A +++++ + PT I VD H+ RI+ R+
Sbjct: 120 RATAKILLDEYDGDIPSSVETLCALPGVGPKMAYLVMNVGWQKPTGICVDVHVHRITERL 179
Query: 168 GLAPGK-----------TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
G P + TP SL R +P + LV G+ C +P+C C
Sbjct: 180 GWTPERAIGKNGSPRKKTPEDTRASLERWLPRDEWIEINPLLVGFGQLTCTPLRPKCAEC 239
Query: 217 IISNL--CKR-IKQ 227
++ C K+
Sbjct: 240 PLAADASCPSAFKE 253
>gi|67474622|ref|XP_653060.1| A/G-specific adenine glycosylase [Entamoeba histolytica HM-1:IMSS]
gi|56469977|gb|EAL47671.1| A/G-specific adenine glycosylase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 307
Score = 76.5 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 73/186 (39%), Gaps = 5/186 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++++ + +L + + + ++V+ ++ Q+ V + K T
Sbjct: 44 KIKQMHEKILKFYEKEGRKLPWRETTDKYKILVSEVMLQQTQVTRVIEKYKSWLIRFPTI 103
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +G + + + L+ + ++ IP +++ L LPGIG
Sbjct: 104 QDLAKANLADVLEEWNGLGFNS-RGKRLRDLAIEVCERYNGIIPSSVDKLLNLPGIGPYT 162
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-LRIIPPKHQYNAHYWLV 199
AN +L + VD +I RI KTP + + + +P + H L+
Sbjct: 163 ANAVLIFSENQDIATVDANIRRILIHELSLDEKTPENILFAYANKCLPLGRSRDWHNALM 222
Query: 200 LHGRYV 205
+G V
Sbjct: 223 DYGALV 228
>gi|94268173|ref|ZP_01291108.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93451700|gb|EAT02475.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 217
Score = 76.1 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 16/217 (7%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF----- 74
+ + I+ + P+ +I +L+ + NV +A +L
Sbjct: 1 MSRPTIAAIYQRLLAHFG-PQHWWPGETALEIISGAVLTQNTAWRNVEQAIANLKAAELL 59
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD-------NKIPQTL 127
++ + +L IR G Y K+ + +L + E D +
Sbjct: 60 PEDTCLTRLATLPAAELAALIRPAGYYNIKAGRLQNLLGRIHAEHDSLAAFLAQQSTTLR 119
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRII 186
L + GIG + A+ I+ A P VDT+ RI +R GL P + ++V++ +
Sbjct: 120 RQLLEIKGIGPETADSIMLYAAQRPVFVVDTYTHRIFSRHGLLPEEADYHQVQEIFHDAL 179
Query: 187 PPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
P + H +V G+ C+ P+C +C + L
Sbjct: 180 PAEAPLYNEYHALIVRLGKEYCRKSNPRCPTCPLEEL 216
>gi|256372112|ref|YP_003109936.1| HhH-GPD family protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008696|gb|ACU54263.1| HhH-GPD family protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 294
Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 6/191 (3%)
Query: 41 GELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
L + + + ++VA + Q+ V + E TP+ + G
Sbjct: 27 RPLPWRARPCDPWHVLVAETMLVQTQVARVEETFVAFIERFPTPRALADGGLVAALESWG 86
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G YR+ + + +++ + P + L LPG+GR A + G+ + +
Sbjct: 87 RLGYYRRAER-LWRAAVVIVETWAGACPVGEDALRALPGVGRYVARAVAVQCGGLAALPI 145
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
DT+ R+ R L + + +EQ ++ + G C+A PQC +C
Sbjct: 146 DTNARRVLVRALLGAPASDSILEQVGCELVNGCDADRLTQAVFDVGALRCRA-APQCDAC 204
Query: 217 IISNLCKRIKQ 227
+ C+ ++
Sbjct: 205 ELRRSCRTHRE 215
>gi|168022853|ref|XP_001763953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684692|gb|EDQ71092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML----AIGEKKLQNYIRTIGIYRKK 104
F +VA ++S+Q+ D A + L + + L ++ +G YR+K
Sbjct: 29 FQALVAAMISSQTRDAVTGAAMQRLRAMPGGLNVAHIASDDVEIDALAEILKPVGFYRQK 88
Query: 105 SENIISLSHILINEFDNK-IPQTLEGLTRLPGIGRKGANVILS--MAFGIPTIGVDTHIF 161
++ + S++ L N +P +LE L +LPG+G K A ++L G + VDT++
Sbjct: 89 AKFMKSIAQSLAAPPHNGAVPNSLEELMKLPGVGPKVALLVLWVAFGMGEEGLIVDTNVR 148
Query: 162 RISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
R+ +R+G P TP ++L +P + + V G+ VCK P+C+ C +S
Sbjct: 149 RVCSRLGWVPADATPELTRRTLESWMPRSMWADTSFLFVGFGQQVCKPLAPKCEGCKVSQ 208
Query: 221 LCKR-IKQ 227
LC KQ
Sbjct: 209 LCPSAFKQ 216
>gi|156839963|ref|XP_001643667.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156114287|gb|EDO15809.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 429
Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQ 92
+ Y +++ V+LS+Q+ D A ++ E ++ L
Sbjct: 177 PINYR--LQVLIGVMLSSQTKDEINAAAMHNITEYCINELEIPEGITIDALLEIDQEILD 234
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
I ++G + +K++ + + IL + ++ IP +EGL LPG+G K + L A+G
Sbjct: 235 ELIHSVGFHSRKAKYLKETALILKEKHNSDIPTNIEGLLALPGVGPKMGYLTLQKAWGKI 294
Query: 153 T-IGVDTHIFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
I VD H+ R++ K P + L +P + Y + LV G+ +C +
Sbjct: 295 DGICVDVHVHRLAKMWKWVDEKKCKTPEHTRKELESWLPRQLWYEINSVLVGFGQVICMS 354
Query: 209 RKPQCQSCIISNLCKRIKQ 227
R +C C+ +++C +
Sbjct: 355 RGKRCDICLANDVCNARDK 373
>gi|220935177|ref|YP_002514076.1| HhH-GPD family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996487|gb|ACL73089.1| HhH-GPD family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 217
Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 84/215 (39%), Gaps = 12/215 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L +++ L P+ + F ++V +L+ + NV +A L
Sbjct: 1 MNGQRLRKVYQLLFEAHG-PQHWWPANSGFEVMVGAVLTQNTAWRNVERAIAALKAANAL 59
Query: 80 PQKMLAI-GEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLTR 132
+ + + +L IR G + K+ + +L ++ + L
Sbjct: 60 SPEAMLDLSDAELARLIRPSGYFNVKARRLKALCRWYLDHGGRRRLRHWPTEKLRASLLS 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII---PPK 189
+ GIG + A+ IL AF P +D + R+ R+G + + L +
Sbjct: 120 VHGIGPETADDILLYAFDRPVFVIDAYTRRLLGRLGHPHAQAAYDDFRMSLESTLGQDER 179
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V HG+ VC+ KP+C+ C++S C+
Sbjct: 180 LYNEYHALIVAHGKDVCRP-KPRCEQCVLSTKCEF 213
>gi|164428361|ref|XP_001728450.1| hypothetical protein NCU11220 [Neurospora crassa OR74A]
gi|157072116|gb|EDO65359.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 625
Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/184 (10%), Positives = 48/184 (26%), Gaps = 29/184 (15%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ ++++ + Q+ V T Q + A +++ + + +G Y + +
Sbjct: 208 AYEVLLSETMLQQTRVSTVIAYYNKWLAALPTMQSLAAAQPEEVLSLWKGLGYYSRATRL 267
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ + ++ +
Sbjct: 268 HALAQLVCPPPEEGG-------------------------GDVKSKEVLEVVWEAAKRLV 302
Query: 168 GLAPGKTPNKVEQSLLRIIPP--KHQYNAHYWLVLHGRYVCKA--RKPQCQSCIISNLCK 223
+ E PP L+ G VC KP+C C + + C+
Sbjct: 303 EAVAWDGTDVTEDGREGKEPPVSDRPGTWGQGLMELGATVCLPGPAKPKCGQCPVKDTCR 362
Query: 224 RIKQ 227
++
Sbjct: 363 AYQE 366
>gi|126179382|ref|YP_001047347.1| HhH-GPD family protein [Methanoculleus marisnigri JR1]
gi|125862176|gb|ABN57365.1| DNA-3-methyladenine glycosylase III [Methanoculleus marisnigri JR1]
Length = 226
Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 14/210 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQ 81
++L +I+ + + F +V +L+ + N +A +L + P+
Sbjct: 7 EDLIQIYDALFAAFGH-QHWWPAKTPFETMVGAILTQNVSWTNAAQAIANLEDAGMLDPR 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTLEGLTRL 133
+ + I Y +K+E I S + + EF + + E L L
Sbjct: 66 LLAEADTADIAPLIVPSRYYNQKAERIREFSRVYVREFRADPAAMAAMETGELRERLLAL 125
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLRIIPP--KH 190
G G++ + IL P VD + RI +R L G + + ++ + P +
Sbjct: 126 RGFGKETTDTILLYVCEKPVFVVDAYTRRIFSRYGFLPEGASYDLTQRLFAENLEPDAEL 185
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
+ H +V G +CK R P C C I
Sbjct: 186 FNDYHAQIVRLGNTICK-RSPLCDRCPIRE 214
>gi|83771969|dbj|BAE62099.1| unnamed protein product [Aspergillus oryzae]
Length = 269
Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
++ + + D + K K L + + +LA+ ++L I +G + K++ I +
Sbjct: 65 LIETSMIKEEPDEDTFKLEKPLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAA 124
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLA 170
+ IL +++ + IP T E L +LPG+G K A + +S A+G VD H+ RI+N G
Sbjct: 125 AIILRDQYQSDIPSTAEELMKLPGVGLKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWN 184
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
KTP ++L +P + + LV G+ VC +C C ++ LCK
Sbjct: 185 KTKTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKS 240
>gi|289615515|emb|CBI57756.1| putative nuclear and mitochondrial base-excision repair protein
[Sordaria macrospora]
Length = 805
Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 3 SSKKSDSYQGNSPLGCLYT-------PKELEEIFYLFSLKW---PSPKGE--------LY 44
SSKK + + T P + EE++ L P+ L
Sbjct: 141 SSKKRTARKPARKTTDALTGEVKVEPPSDWEEVYRLVKEMRISGPAANAAVDTMGCERLA 200
Query: 45 YVNH------FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----------PQKMLAIGE 88
N F +VA++LS+Q+ D +A L + + MLA+
Sbjct: 201 SNNASARDRRFHTLVALMLSSQTKDTVNAEAMLRLKKELPPHTEGAEPGLNLENMLAVEP 260
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL--- 145
L I +G + K++ + + IL + +++ IP T+EGL LPG+G K A++ +
Sbjct: 261 TLLNELIGKVGFHNNKTKYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSAE 320
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
+ + IGVD H+ RI+N G T P + +L +P ++ LV G+
Sbjct: 321 NGWNRVEGIGVDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEINWLLVGFGQ 380
Query: 204 YVCKARKPQCQSCI--ISNLCKRIKQ 227
VC +C C + LCK ++
Sbjct: 381 SVCLPVGRKCGDCELGLRGLCKSAER 406
>gi|189346903|ref|YP_001943432.1| HhH-GPD family protein [Chlorobium limicola DSM 245]
gi|189341050|gb|ACD90453.1| HhH-GPD family protein [Chlorobium limicola DSM 245]
Length = 278
Score = 75.3 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 5/192 (2%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E + + + + + ++V+ ++ Q+ V
Sbjct: 8 QEPIEVFRRKIFAFYGDSRRSFPWRETRDRYAVMVSEIMLQQTQADRVVPKFTAWMGRFP 67
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + + +G + + S + ++ F +P L LPGIG
Sbjct: 68 DVAALASAPLRDVLALWSGLGYNSRGQR-LQSCARMVTERFGGVVPAAPAELKTLPGIGD 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
I A + VDT+I RI + L + ++ + +++PP + H
Sbjct: 127 YTCRSIPVFADNLDVAAVDTNIRRIIIHEFALPEETSKRSIQIAAEQLLPPGRSRDWHNA 186
Query: 198 LVLHGRYVCKAR 209
L+ +G +R
Sbjct: 187 LMDYGSLCLTSR 198
>gi|326773919|ref|ZP_08233201.1| A/G-specific adenine glycosylase [Actinomyces viscosus C505]
gi|326636058|gb|EGE36962.1| A/G-specific adenine glycosylase [Actinomyces viscosus C505]
Length = 204
Score = 75.3 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 11/183 (6%)
Query: 35 KWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ + +L + + ++V+ ++S Q+ V A + P ++
Sbjct: 23 WYDAHARDLPWRRPGTTPWEVLVSEVMSQQTPVARVVPAWQEWMRRWPGPAELAQAPTAA 82
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G R+ + + ++ + +P L+ L LPG+G A +L+ A G
Sbjct: 83 VLRVWGRLGYPRRALRLV-ECARSVVEQHGGVLPDDLDALLALPGVGEYTAGAVLAFAHG 141
Query: 151 IPTIGVDTHIFRISNR----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHY--WLVLHGRY 204
+ +DT++ R+ R L + L ++P AH+ ++ G
Sbjct: 142 RRALVLDTNVRRVLARAVGGQALPAPSLNRAERERALGLLPDDDATAAHWSVAVMELGAL 201
Query: 205 VCK 207
VC
Sbjct: 202 VCT 204
>gi|313127078|ref|YP_004037348.1| endoiii-related endonuclease [Halogeometricum borinquense DSM
11551]
gi|312293443|gb|ADQ67903.1| predicted endoIII-related endonuclease [Halogeometricum borinquense
DSM 11551]
Length = 277
Score = 75.3 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 89/234 (38%), Gaps = 34/234 (14%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E + + + + F +V +LS ++DV A L +
Sbjct: 30 RAEAVVDELGQMY--WQKAYGGQDAFECLVRTILSQNTSDVASQPAHDSLMDRYAGGDGD 87
Query: 84 LAI---------------GEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------- 119
A + +L I + G+Y +KSE II + + F
Sbjct: 88 SADGDSADGDLAAALADAEQSELAETIASAGLYNQKSEMIIGAAERICESFGGADGFDEF 147
Query: 120 --DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK-TP 175
D + L + G+G K A+ +L + G VDTH+ RI R+GLA
Sbjct: 148 VKDEDPDTVRKRLLDIHGVGPKTADCVLLFSGGRGGVFPVDTHVHRIGRRMGLASADADH 207
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCKRI 225
V + L +P + H ++ GR CKARKP C ++C + +LC R+
Sbjct: 208 EDVREHLEADVPAEKCGFGHTAMIQFGREYCKARKPACLDGPEACPLYDLCDRV 261
>gi|239994548|ref|ZP_04715072.1| Endonuclease III/Nth [Alteromonas macleodii ATCC 27126]
Length = 105
Score = 75.3 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 14 SPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
P L ++++EI + +P L + + +TL++AVLLSAQ TD VN+ T L
Sbjct: 6 KPAKPLSKQEKVKEIMRILDDLYPEIPIFLDHKDPYTLLIAVLLSAQCTDERVNQITPKL 65
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
F AD P M+ + +++Q+ IR G+ KS+ I
Sbjct: 66 FARADNPYDMVLMSIEEIQDIIRPCGLSPMKSKGIWH 102
>gi|109946935|ref|YP_664163.1| DNA glycosylase MutY [Helicobacter acinonychis str. Sheeba]
gi|109714156|emb|CAJ99164.1| A/G-specific adenine glycosylase [Helicobacter acinonychis str.
Sheeba]
Length = 289
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 57 LSAQST-DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ + V + + T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVVERFYFPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKT 174
E +++P + L +LPGIG AN IL F T VD +I R + GL P
Sbjct: 60 AKEHHSQLPNDYQSLLKLPGIGVYTANAILCFGFRKKTACVDANIKRALLRLFGLDPNIQ 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQRKANNFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|148262279|ref|YP_001228985.1| HhH-GPD family protein [Geobacter uraniireducens Rf4]
gi|146395779|gb|ABQ24412.1| DNA-3-methyladenine glycosylase III [Geobacter uraniireducens Rf4]
Length = 228
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 14/210 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
IF + ++ P F + V +L+ + NV KA +L + + +
Sbjct: 21 IFRILLDRYG-PLHWWPAETPFEVCVGAILTQNTNWGNVEKAIGNLKKEGLLSAEAMRDV 79
Query: 88 EKK-LQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTLEGLTRLPGIGR 138
+ L IR G + KS + L D + L ++ GIGR
Sbjct: 80 PVERLAEVIRPAGFFNVKSARLKDFVAWLFMRHDGKLKQMFSGDWQDLRKELLQVRGIGR 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRIIPP--KHQYNAH 195
+ + IL A P+ VD + R+ + ++ ++ + +P + H
Sbjct: 140 ETCDSILLYAGNKPSFVVDAYTKRLFAHLDVISEKADYEEIRALFMENLPEDVEMFNEYH 199
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+V H + C+ +KP C C + CK +
Sbjct: 200 ALIVQHCKEHCR-KKPLCPGCDLHFSCKAV 228
>gi|292655041|ref|YP_003534938.1| endonuclease III [Haloferax volcanii DS2]
gi|291372380|gb|ADE04607.1| endonuclease III [Haloferax volcanii DS2]
Length = 268
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 34/228 (14%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHF------TLIVAVLLSAQSTDVNVNKATKHLF 74
T E + ++ + + +V +LS ++D A L
Sbjct: 29 TATRAEVVVDRLGERY--------WRKAYGGQGGFECLVRTILSQNTSDKASQPAHDELM 80
Query: 75 EIADTPQKMLA---IGEKKLQNYIRTIGIYRKKSENIISLS-----------HILINEFD 120
D + + + IR+ G+Y +KS+ I ++ +
Sbjct: 81 AQYDGGDLAESLAAADREGIVEAIRSGGLYNQKSKLIQGVAEEVLADFGSEADFDRYVRE 140
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNK-V 178
+ L + G+G K A+ +L A G VDTH+ RI+ RIGLAP ++ V
Sbjct: 141 EAPATVRDRLLEMKGVGPKTADCVLLFAGGRGGVFPVDTHVHRIARRIGLAPADADHEGV 200
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLC 222
+L R IP + H ++ GR CKARKP C ++C ++++C
Sbjct: 201 RAALERDIPDEKCGFGHTAMIQFGREFCKARKPACLDGPEACPMTDVC 248
>gi|208434098|ref|YP_002265764.1| A/G-specific adenine glycosylase [Helicobacter pylori G27]
gi|208432027|gb|ACI26898.1| A/G-specific adenine glycosylase [Helicobacter pylori G27]
Length = 290
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 56 LLSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MMSQQTQINTVVERFYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEI 59
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGK 173
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 CVKEHNSQLPNDYQSLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNI 119
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
T ++ + P +N + L+ G +C KP+C C + C
Sbjct: 120 TAKDLQIKANDFLNPNESFNHNQALIDLGALICSP-KPKCAICPFNPYC 167
>gi|295667235|ref|XP_002794167.1| endonuclease III [Paracoccidioides brasiliensis Pb01]
gi|226286273|gb|EEH41839.1| endonuclease III [Paracoccidioides brasiliensis Pb01]
Length = 474
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V TK + T + +LA+ +L I+TIG + K++ I + IL +E+D+ IP
Sbjct: 275 VWDHTKQQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPP 334
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 335 TIEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 394
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 395 WLPRDKWHEINKLLVGLGQTVCLPVARRCGECELAGSGLCKS 436
Score = 36.8 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE------LYYVN------HFTL 51
++K+ + G + +++ E K P+ + LY+ + F +
Sbjct: 146 ARKTTAVDGTVKVEPPSNWEKIYETVKEMRRKNPTAPVDTMGCSQLYWRSSSPRDRRFHI 205
Query: 52 IVAVLLSAQSTDVNVNKATKHLF 74
++A++LS+Q+ D A + L
Sbjct: 206 LIALMLSSQTKDTVTALAMQRLH 228
>gi|197119883|ref|YP_002140310.1| endonuclease III-like protein [Geobacter bemidjiensis Bem]
gi|197089243|gb|ACH40514.1| endonuclease III-related protein [Geobacter bemidjiensis Bem]
Length = 228
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 13/213 (6%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-T 79
T L E+F ++ F + V +L+ + +NV KA +L +
Sbjct: 10 TRAALLELFETLLSRYG-ALNWWPADTPFEVCVGAILTQNTNWLNVEKAIVNLKREGLLS 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT-------R 132
+ + I E +L IR G + KS + L + +
Sbjct: 69 AEALREIDEGRLAELIRPSGFFNVKSARLKGFVGWLFERYGSLDAMFQGDWIGLREELSA 128
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQ 191
+ GIG + + IL A G P+ VD + R+ +R+GL ++V + +P +
Sbjct: 129 VRGIGPETCDSILLYAGGKPSFVVDAYTRRLFSRLGLMREEDDYHRVRALFMDHLPAEVP 188
Query: 192 --YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V + C+ +KP C C ++ C
Sbjct: 189 LFNEYHALIVEQCKRHCR-KKPLCDGCPLTRFC 220
>gi|164424761|ref|XP_960699.2| hypothetical protein NCU06654 [Neurospora crassa OR74A]
gi|157070649|gb|EAA31463.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 815
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----------PQKMLAIGEKKLQNYIRTI 98
F +VA++LS+Q+ D +A L + + MLA+ L I +
Sbjct: 223 FHTLVALMLSSQTKDTVNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNELIGKV 282
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL---SMAFGIPTIG 155
G + K+ + + IL + +++ IP T+EGL LPG+G K A++ + + + IG
Sbjct: 283 GFHNNKTRYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRVEGIG 342
Query: 156 VDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VD H+ RI+N G T P + +L +P ++ LV G+ VC +C
Sbjct: 343 VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEINWLLVGFGQSVCLPVGRKC 402
Query: 214 QSCI--ISNLCKRIKQ 227
C + LCK ++
Sbjct: 403 GDCELGLRGLCKAAER 418
>gi|18307439|emb|CAD21502.1| related to DNA repair protein NTG1 [Neurospora crassa]
Length = 835
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADT----------PQKMLAIGEKKLQNYIRTI 98
F +VA++LS+Q+ D +A L + + MLA+ L I +
Sbjct: 243 FHTLVALMLSSQTKDTVNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNELIGKV 302
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL---SMAFGIPTIG 155
G + K+ + + IL + +++ IP T+EGL LPG+G K A++ + + + IG
Sbjct: 303 GFHNNKTRYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRVEGIG 362
Query: 156 VDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VD H+ RI+N G T P + +L +P ++ LV G+ VC +C
Sbjct: 363 VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEINWLLVGFGQSVCLPVGRKC 422
Query: 214 QSCI--ISNLCKRIKQ 227
C + LCK ++
Sbjct: 423 GDCELGLRGLCKAAER 438
>gi|170093764|ref|XP_001878103.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646557|gb|EDR10802.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 236
Score = 74.9 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKS 105
F +V+++LS+Q+ D + A L E + A+ E + + I +G +R+K+
Sbjct: 51 FATLVSLMLSSQTKDEVTDAAVSKLREALGGSLTVDAMIEAEPSVISEAIAKVGFWRRKT 110
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTHIFRIS 164
+ + + L +EFD+ +P+T++ L LPG+G K A + L +A+ IGVD H+ RI+
Sbjct: 111 DYLQRAAQRLRDEFDSDVPKTVDELCSLPGVGPKMAFLALQVAWDLNHGIGVDVHVHRIT 170
Query: 165 NRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--SN 220
NR+G P K P + +L +P + ++ LV G+ VC P+C SC +
Sbjct: 171 NRLGWHKKPTKNPEETRLNLQSWLPKELHREINHMLVGFGQVVCLPVGPKCDSCALSTKQ 230
Query: 221 LCKRIK 226
LC +
Sbjct: 231 LCPSAR 236
>gi|261403086|ref|YP_003247310.1| HhH-GPD family protein [Methanocaldococcus vulcanius M7]
gi|261370079|gb|ACX72828.1| HhH-GPD family protein [Methanocaldococcus vulcanius M7]
Length = 230
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DT 79
K L +I+ + + P+ + ++V +L+ ++ NV KA ++L
Sbjct: 10 KEKLLFKIYKVLLDSYG-PQHWWPAETRYEVVVGAVLTQNTSWKNVEKAIRNLKNKDLID 68
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGL 130
K+L I E L+ I+ G Y K++ + +++ ++ + + L
Sbjct: 69 EIKILNIDEDVLKALIKPAGFYNIKAKRLKNITKYIVENYKTTEDMARANKDVKELRKEL 128
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK 189
+ GIG + A+ IL A + +D + RI +R+ + K +++++ +P
Sbjct: 129 LSIKGIGPETADSILLYALDKESFVIDAYTKRIFSRLNIINEKMSYDEIKKLFETNLPKD 188
Query: 190 H--QYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
H +V H + VCK + P C +C I
Sbjct: 189 LQIYKEYHALIVEHAKRVCK-KNPLCDNCPIKK 220
>gi|254778858|ref|YP_003056963.1| DNA glycosylase MutY [Helicobacter pylori B38]
gi|254000769|emb|CAX28693.1| A/G-specific adenine glycosylase [Helicobacter pylori B38]
Length = 290
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Query: 56 LLSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MMSQQTQINTVVERFYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEI 59
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGK 173
+ E +++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 CVKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNI 119
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 HAKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 167
>gi|48477665|ref|YP_023371.1| endonuclease III [Picrophilus torridus DSM 9790]
gi|48430313|gb|AAT43178.1| endonuclease III [Picrophilus torridus DSM 9790]
Length = 215
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKM 83
+ EI+ + N F +++ +L+ ++ NV KA + L T +
Sbjct: 3 IPEIYKRLFSFYGDLH-WWPAENDFEVLIGAILTQNTSWRNVEKAIESLKSSGQLTIDWI 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG------IG 137
+ + K L IR+ G Y +K++ I + + + N IG
Sbjct: 62 IKMDCKDLALKIRSAGFYNQKAKYIKNACISIKAIYGNLDNMKKNFNEVYDFLSGLKGIG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIG---LAPGKTPNKVEQSLLRIIPPKHQYNA 194
+ + IL A T +D + R+ +R+ + + + VE+SL + N
Sbjct: 122 PETRDSILLYALNYRTFVIDNYTLRLFSRLYGKNFSYIEIKSSVEESLKTVF---ELKNF 178
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V + C+ +KP C C +++LC
Sbjct: 179 HAMIVELSKDYCR-KKPLCLKCPLNDLCLY 207
>gi|322380696|ref|ZP_08054835.1| A/G-specific adenine glycosylase [Helicobacter suis HS5]
gi|321146864|gb|EFX41625.1| A/G-specific adenine glycosylase [Helicobacter suis HS5]
Length = 290
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 7/175 (4%)
Query: 57 LSAQSTDVNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V +K + T + ++ + +G Y +++N+ + I
Sbjct: 1 MSQQTQIEVVLDKFYLPFLQAFPTLIDLANAPLDRVLLLWKGLGYYA-RAKNLHKSAQIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI-FRISNRIGLAPGKT 174
++ +P L LPGIG A+ IL F +DT++ + GL
Sbjct: 60 CQKYGGCLPSNYTDLLALPGIGAYSASAILCFGFRQNVGVLDTNVSRVLLRLFGLDLKSK 119
Query: 175 PNKV--EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
K + + P + ++ + L+ G VC KP C C +S C K+
Sbjct: 120 NLKTLLQDKARAFVNPTNSFDHNQALIDLGALVCTP-KPSCHICPLSFSC-YGKE 172
>gi|190345325|gb|EDK37193.2| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG-- 87
+ PS + + F L+++++LS+Q+ D A K L + +
Sbjct: 210 ERIPSKIRPHGFDSPRTYRFQLLISLMLSSQTKDEVNFAAIKTLDDELMKRGFPNGLCLE 269
Query: 88 ------EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
E+ + I+ +G + +K+ I S +L + IP + + LPG+G K
Sbjct: 270 AVLATSEQDINQCIQKVGFHHRKAGYIKRASQMLHDNHSGDIPDNIRDIVALPGVGPKMG 329
Query: 142 NVILSMAFGIPTIG-VDTHIFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
++L + VD HI R++ G A +TP + L +P + + + L
Sbjct: 330 YLLLQRGWYKNEGIGVDVHIHRLAQMWGWVSAKARTPEQTRLELESWLPRRLWGDINPIL 389
Query: 199 VLHGRYVCKARKPQCQSCII--SNLCK 223
V G+ +C C C + LCK
Sbjct: 390 VGFGQVICPPNYGNCDICTLGKQKLCK 416
>gi|210134342|ref|YP_002300781.1| DNA glycosylase MutY [Helicobacter pylori P12]
gi|210132310|gb|ACJ07301.1| A/G-specific adenine glycosylase [Helicobacter pylori P12]
Length = 289
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E +++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 VKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIH 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + P +N + L+ G +C KP+C C + C
Sbjct: 120 AKDLQIKANDFLNPNESFNHNQALIDLGALICSP-KPKCAICPFNPYC 166
>gi|167392925|ref|XP_001740351.1| A/G-specific adenine DNA glycosylase [Entamoeba dispar SAW760]
gi|165895546|gb|EDR23212.1| A/G-specific adenine DNA glycosylase, putative [Entamoeba dispar
SAW760]
Length = 307
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 5/186 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++++ + +L + + + ++V+ ++ Q+ V + K T
Sbjct: 44 KIKQMHEKILGFYEKEGRKLPWRETTDKYKILVSEVMLQQTQVTRVIEKYKSWLIRFPTI 103
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
Q + + +G + + + L+ + + IP ++ L LPGIG
Sbjct: 104 QDLAKASLADVLEEWNGLGF-NSRGKRLRDLAIEVCERYKGIIPSNVDKLLNLPGIGPYT 162
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-LRIIPPKHQYNAHYWLV 199
AN +L + VD +I RI KTP + + + +P + H L+
Sbjct: 163 ANAVLIFSENQDIATVDANIRRILIHELSLDEKTPENILFAYANKCLPLGRSRDWHNALM 222
Query: 200 LHGRYV 205
+G V
Sbjct: 223 DYGALV 228
>gi|224093156|ref|XP_002309812.1| predicted protein [Populus trichocarpa]
gi|222852715|gb|EEE90262.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AF 149
+++ I +G Y +K+ N+ ++ I + ++D IP +LE L LPGIG K A++++++
Sbjct: 200 IKDLIYPVGFYTRKASNLKKIAKICLLKYDGDIPSSLEDLLSLPGIGPKMAHLVMNIAWN 259
Query: 150 GIPTIGVDTHIFRISNRIGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ I VDTH+ RI NR+G TP + ++L +P + LV G
Sbjct: 260 NVQGICVDTHVHRICNRLGWVARPGTKQKTSTPEETREALQLWLPKDEWVPINPLLVGFG 319
Query: 203 RYVCKARKPQCQSCIISNLCKR-IKQ 227
+ +C +P+C C IS C K+
Sbjct: 320 QTICTPLRPRCGMCCISEFCPSAFKE 345
>gi|253702180|ref|YP_003023369.1| HhH-GPD family protein [Geobacter sp. M21]
gi|251777030|gb|ACT19611.1| HhH-GPD family protein [Geobacter sp. M21]
Length = 228
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 82/221 (37%), Gaps = 13/221 (5%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
L T L E+F ++ F + V +L+ + +NV KA +
Sbjct: 2 KDKLDKERTRAALMELFEALLARYG-ALNWWPADTPFEVCVGAILTQNTNWLNVEKAIVN 60
Query: 73 LFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L + L ++ L IR G + KS + L+ + +
Sbjct: 61 LKREGLLSAEALREIDEGRLAESIRPSGFFNVKSARLKGFVEWLLERYGSLDAMFEGDWV 120
Query: 132 RLPG-------IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLL 183
RL IG + + IL A G P+ VD + R+ +R+GL ++V +
Sbjct: 121 RLREELSAVRGIGPETCDSILLYAGGKPSFVVDAYTRRLFSRLGLVREEDDYHQVRALFM 180
Query: 184 RIIPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+P K H +V + C+ +KP C+ C +S C
Sbjct: 181 DHLPAKVPLFNEYHALIVEQCKRHCR-KKPLCEGCPLSRFC 220
>gi|291534983|emb|CBL08095.1| A/G-specific DNA glycosylase [Roseburia intestinalis M50/1]
Length = 354
Score = 74.6 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 33/203 (16%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + + E +L +G Y + N+ + ++
Sbjct: 1 MLQQTRVEAVKPYFERFTTALPDAKALAVCPEDELLKLWEGLGYYN-RVRNMQKAAVEVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ ++P E L +L GIG A + S+A+GIP VD ++ R+ R+
Sbjct: 60 EYYGGQLPADYEKLLKLKGIGHYTAGAVASIAYGIPVPAVDGNVLRVLTRVSADDTDIMK 119
Query: 177 K-VEQSLLRIIPP------------------------------KHQYNAHYWLVLHGRYV 205
+ + +++ + L+ G +
Sbjct: 120 QSFRNEMEKLLEKLMHGADGRNEKNVFPWMEDADDLRAKVYHQNLAGAFNQALMELGATI 179
Query: 206 CKAR-KPQCQSCIISNLCKRIKQ 227
C P C C + C+ KQ
Sbjct: 180 CVPNGAPLCTECPWKDFCEAKKQ 202
>gi|78189104|ref|YP_379442.1| HhH-GPD [Chlorobium chlorochromatii CaD3]
gi|78171303|gb|ABB28399.1| HhH-GPD [Chlorobium chlorochromatii CaD3]
Length = 281
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 77/196 (39%), Gaps = 5/196 (2%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFE 75
L + +++E++ + + N + ++V+ ++ Q+ V + +
Sbjct: 5 LPSKRQIEQLQAKVFAFYGEHGRSFPWRNTTDRYAVMVSEVMLQQTQAERVVERFEAWLV 64
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T Q + +++ +G + + + ++ +F +P E L +LPG
Sbjct: 65 AFPTVQALADAPLREVLALWSGLGYNSRAER-LQRCAQTIVADFGGVVPALPEVLLQLPG 123
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
IG + I A VDT+I RI + GL P +++ R++P
Sbjct: 124 IGAYTSRSIPIFADNFDVATVDTNIRRIVLHEFGLPETLKPRELQMVADRLLPHGQSRKW 183
Query: 195 HYWLVLHGRYVCKARK 210
H L+ +G ++K
Sbjct: 184 HNALMDYGALHLTSQK 199
>gi|87312107|ref|ZP_01094213.1| HhH-GPD protein [Blastopirellula marina DSM 3645]
gi|87285203|gb|EAQ77131.1| HhH-GPD protein [Blastopirellula marina DSM 3645]
Length = 221
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
++ + + + ++V +L+ ++ NV KA +L E P K+
Sbjct: 8 VYDRLLAHYGH-QSWWPGDSPLEIMVGAVLTQNTSWKNVEKAIVNLKEEGLLDPFKLHET 66
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILIN--------EFDNKIPQTLEGLTRLPGIGR 138
++L IR G YR K++ + +L +++ F + E L L GIG
Sbjct: 67 PVEELAEIIRPAGYYRLKAKRLQNLMRYVVDVHSGDLEAMFACSVDSLREDLLALNGIGP 126
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPK--HQYNAH 195
+ A+ IL A +PT VDT+ R+ R G ++++ + +P H
Sbjct: 127 ETADAILLYAGNLPTFVVDTYTSRVLKRHGWIEQEADYHQIQDQFVSQLPEDVALFNEYH 186
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNL 221
LV G C+ + P+C++C + +L
Sbjct: 187 ALLVRVGNGHCR-KTPKCETCPLCDL 211
>gi|328951775|ref|YP_004369109.1| HhH-GPD family protein [Desulfobacca acetoxidans DSM 11109]
gi|328452099|gb|AEB07928.1| HhH-GPD family protein [Desulfobacca acetoxidans DSM 11109]
Length = 215
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTP 80
+++ ++++ + P+G + + V +L+ + NV A L +
Sbjct: 2 KEKITTLYHILYQAYG-PQGWWPGDSPLEVAVGAILTQNTNWKNVATAIARLKQAGLLNA 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTR 132
+ + + +++L +IR G Y K+ + S L + + ++ + + L
Sbjct: 61 EALFELPQEELVEHIRPAGYYNIKARRLKSFLAFLFSAYGGSLEEMAAAELEEVRQQLLA 120
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPK-- 189
+ GIG + A+ IL A P VD + FRI +R L + + ++++ L+ +PP
Sbjct: 121 VKGIGPETADSILLYALEKPIFVVDAYTFRILSRHNLISDPSSYDQLQSIFLQALPPDTA 180
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL--CK 223
H LV G+ C+ R P+C++C + C
Sbjct: 181 LYKEYHALLVQTGKDCCRPR-PRCEACPVQGFHGCP 215
>gi|237784955|ref|YP_002905660.1| A/G-specific DNA glycosylase [Corynebacterium kroppenstedtii DSM
44385]
gi|237757867|gb|ACR17117.1| A/G-specific DNA glycosylase [Corynebacterium kroppenstedtii DSM
44385]
Length = 347
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 81/254 (31%), Gaps = 59/254 (23%)
Query: 27 EIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + + L + + ++++ ++S Q+ V A + + TP
Sbjct: 9 FLVDELNDWFILAGRHLPWREPGCSAWGVLLSEVMSQQTPVSRVEPAWREWMDRWPTPAD 68
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
G ++ +G R+ + + ++++ +P T++ L LPGIG A
Sbjct: 69 FARAGRDEVLRAWGRLGYPRRALR-LHECARTIVDKHSGAVPATVDELLDLPGIGEYTAR 127
Query: 143 VILSMAFGIPTIGVDTHIFRISNR------------------IGLAPGKTPNKV------ 178
+ A+G VDT+I R+ R + + +
Sbjct: 128 AVACFAYGWAVPVVDTNIRRVMARAVHGKYLQGPARRADLDDMRALMPVSEEQAGSSVGA 187
Query: 179 ------EQSLLRIIPPK------------------------HQYNAHYWLVLHGRYVCKA 208
E++ + +P + ++ G VC +
Sbjct: 188 IVQHIREKAGIPEVPVEAGTLFDGPGIGLGHLSNEQLTDVERSAVFSASIMELGALVCTS 247
Query: 209 RKPQCQSCIISNLC 222
R +C+ C + C
Sbjct: 248 RVARCEQCPLVRTC 261
>gi|148975167|ref|ZP_01812091.1| DNA-lyase [Vibrionales bacterium SWAT-3]
gi|145965091|gb|EDK30341.1| DNA-lyase [Vibrionales bacterium SWAT-3]
Length = 227
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 12/204 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+F + + + +++ +L + N KA +L E +
Sbjct: 18 VFDTLEQHYGY-FDWWQRNDSYEIVLGAILVQNTNWKNAEKALINLDEKCNPRSIAEMDL 76
Query: 88 EKKLQNYIRTIGIYRKK-------SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+L +R+ G Y +K +E + + + + Q + L + GIG +
Sbjct: 77 -DELAQKVRSSGYYNQKAIKLKAVTEWFLKYQYDMSVVREQNKDQLRKELLEVKGIGGET 135
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQYNAHYWL 198
A+ IL A G P+ +D + RI R GL K+ K + +IP K H L
Sbjct: 136 ADAILVYAIGKPSFVIDAYARRIFTRNGLDVPKSYEKFRALMESVIPLDTKRYGYYHGLL 195
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
V HG+ C KP+CQ C ++++C
Sbjct: 196 VEHGQQFCNP-KPKCQHCPLNSMC 218
>gi|225679960|gb|EEH18244.1| endonuclease III lyase [Paracoccidioides brasiliensis Pb03]
Length = 474
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V TK + T + +LA+ +L I+TIG + K++ I + IL +E+D+ IP
Sbjct: 275 VWDHTKQQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPP 334
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 335 TIEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 394
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 395 WLPRDKWHEINKLLVGLGQTVCLPVARRCGECELAGSGLCKS 436
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE------LYYVN------HFTL 51
++K+ + G + +++ + K P+ + LY+ + F +
Sbjct: 146 ARKTTAADGTVKVEPPLNWEKIYDTVKEMRRKNPTAPVDTMGCSQLYWRSSSPRERRFHI 205
Query: 52 IVAVLLSAQSTDVNVNKATKHLF 74
++A++LS+Q+ D A + L
Sbjct: 206 LIALMLSSQTKDTVTALAMQRLH 228
>gi|241949395|ref|XP_002417420.1| DNA base excision repair N-glycosylase, putative; DNA-(apurinic or
apyrimidinic site) lyase, putative; endonuclease III
homolog, putative [Candida dubliniensis CD36]
gi|223640758|emb|CAX45072.1| DNA base excision repair N-glycosylase, putative [Candida
dubliniensis CD36]
Length = 320
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATK-------HLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
F L+++++LS+Q+ D +A K + + + + E ++ +YI+ +G +
Sbjct: 100 FQLLISLMLSSQTKDEVNYQAMKNLHEGLLKVHPDGLCIESLSKLSEAEIDSYIKKVGFH 159
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHI 160
+K++ I IL+ F IP+T+E + LPG+G K ++L A+GI VD H+
Sbjct: 160 NRKAQYIKKTCSILMENFGGDIPKTIEEIVALPGVGPKMGFLLLQSAWGINAGVGVDVHL 219
Query: 161 FRISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R++ G TP K L +P + + + +V G+ +C R C C +
Sbjct: 220 HRLALMWGWVSQKANTPEKARLELQEWLPKNYWADINPLVVGFGQVICVPRAANCDICSL 279
Query: 219 SN--LCK 223
+ LCK
Sbjct: 280 ARDGLCK 286
>gi|167561493|ref|ZP_02354409.1| A/G-specific adenine glycosylase [Burkholderia oklahomensis EO147]
Length = 316
Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 10/175 (5%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V E + A + +G Y ++ N+ + ++
Sbjct: 1 MLQQTQVSTVVPYYMRFLERYPDVAALAAAPIDDVMALWAGLGYYS-RARNLHRCAQAVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
P + E L LPGIGR A I S AFG +D ++ R+ R+ G +
Sbjct: 60 ELHGGAFPASPEVLAELPGIGRSTAAAIASFAFGARATILDGNVKRVLARVFGVEGFPGD 119
Query: 177 K-VEQSLLRI----IPPK----HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K VE + + +P L+ G +C KP C C + C
Sbjct: 120 KRVENEMWALAEALLPDAAEQADVTAYTQGLMDLGATLCARGKPDCARCPFAGDC 174
>gi|327353694|gb|EGE82551.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ATCC 18188]
Length = 539
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +E ++ + + K E V ++ V V +
Sbjct: 289 VAAVKKREEARQMIKKEENEGQTFKREAQGDVKVETKVEEEQERETKKVLVWDRNNQHTK 348
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + +LA+ +L IRT+G + K++ I + + IL +E+++ IP T EGL RLPG
Sbjct: 349 STLTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPG 408
Query: 136 IGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+G K A + +S A+G VD H+ RI+N G KTP + +L +P +
Sbjct: 409 VGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALESWLPKDKWHEV 468
Query: 195 HYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ LV G+ VC +C C ++ LCK
Sbjct: 469 NKLLVGLGQTVCLPVARRCGECELAGTGLCKS 500
Score = 34.9 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE------LYYVN------HFTL 51
++KS G + +++ +I K P+ + LY+ + F +
Sbjct: 154 ARKSTGPNGVVKVEPPSNWEKIYDIVKEMRRKNPTAPVDTMGCSQLYWRDSSPRDRRFHI 213
Query: 52 IVAVLLSAQSTDVNVNKATKHLF 74
++A++LS+Q+ D A + L
Sbjct: 214 LIALMLSSQTKDTVTAIAMQRLH 236
>gi|320333147|ref|YP_004169858.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
gi|319754436|gb|ADV66193.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
Length = 258
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 15/226 (6%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGE---LYYVNHFTLIVAVLLSAQSTDVNVNKA 69
PL P+E + + G+ + +++ +LS ++ + A
Sbjct: 4 ARPLNAARPPEERAALLRELHARTRDAYGQKLLVPRREALHELISTILSQRTNWRDEETA 63
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI------ 123
+ L +I D + +++ + IR K+ I + + + N
Sbjct: 64 YQELVKIGD-WDAIAEAPVEQVAHAIRASNYPEVKAPRIQATLKAICAQRGNYDLSFLVD 122
Query: 124 ---PQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
L+ LT LPG+G K A+++L F P VDTH+ RI+ R+G P +
Sbjct: 123 LPHEDGLKWLTDLPGVGVKTASLVLLFNFSKPVFPVDTHVHRITTRVGAIPRMGEAVAHK 182
Query: 181 SLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+LL+++ P Y H L+ HG+ VC +P+C C++ +LC
Sbjct: 183 ALLKLLAPDPPFLYELHINLLKHGQQVCTFSRPRCPKCVLRDLCDA 228
>gi|82596189|ref|XP_726159.1| A/G-specific adenine glycosylase [Plasmodium yoelii yoelii str.
17XNL]
gi|23481449|gb|EAA17724.1| A/G-specific adenine glycosylase, putative [Plasmodium yoelii
yoelii]
Length = 315
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 9/178 (5%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V T + + + +G Y +++N++ I++
Sbjct: 1 MLQQTKVATVLNYYLKWMNKWPTIFDLTKSNLDDILTEWKGLGYYN-RAKNLLECCKIVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
N+++ P L+ L LPGIG A I + I +DT+I RI +RI +
Sbjct: 60 NKYNGIFPNNLKLLKDLPGIGNYTAKAISIHLYNSKDICIDTNIIRIFSRITDTINYYGS 119
Query: 177 KVEQSLLRIIPP------KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK-RIKQ 227
+ + + + + L+ G +C PQC C ++ C +K+
Sbjct: 120 TILSQHCEEVSKILCTDACNYSDFNQALMDLGSSICN-TSPQCSICPLNKYCLIYLKE 176
>gi|303281312|ref|XP_003059948.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458603|gb|EEH55900.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 335
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 70/224 (31%), Gaps = 58/224 (25%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+S Q+ V E T + ++++ +G YR+ + ++
Sbjct: 1 MSQQTQIDRVATYWLRWTERWPTAAHLAEATQEEVNELWAGLGYYRRARFLLDGARWVVA 60
Query: 117 NEFDN-KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ K+P L ++PG+G A+ + S+AF P VD ++ R+ +R+ G
Sbjct: 61 EDGGGGKMPSDAASLGKIPGVGPYTASAVASIAFDEPIAAVDGNVLRVVSRLACVRGGGD 120
Query: 176 ---------NKVEQSLLRIIPPKHQYNAHYW----------------------------- 197
+ ++ + + +
Sbjct: 121 VTKPGTSAGKACKAVADALLCAERPGDHNQARSHEGSRASFFTHRSGSFTTLYLIACVAF 180
Query: 198 -------------------LVLHGRYVCKARKPQCQSCIISNLC 222
++ G VC R P+C C ++++C
Sbjct: 181 RLTDDGLFFSYEIARRIQAMMELGATVCTPRNPKCGECPVASMC 224
>gi|255021570|ref|ZP_05293613.1| HhH-GPD family protein [Acidithiobacillus caldus ATCC 51756]
gi|254968958|gb|EET26477.1| HhH-GPD family protein [Acidithiobacillus caldus ATCC 51756]
Length = 238
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTP 80
P++ E+ + P+ + F ++V +L+ ++ V KA L +
Sbjct: 2 PEDWRELLARLQQAFG-PQHWWPADSPFEVMVGAILTQNTSWTQVEKAIAGLRKAQLLDG 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT----------LEGL 130
+ +L + L+ +R G YR K+ +++L L E P+ L
Sbjct: 61 KALLHTPPEVLEPLLRCTGYYRLKTRRLLALCAFLQREGCLGRPEHLGARDDLTTLRRKL 120
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRIIPPK 189
+ G+G + A+ IL A P VD + R++ R+G A + + + +
Sbjct: 121 LGVYGVGEETADSILLYALQRPISVVDAYTKRLAQRLGWADARVSYAALQSRMEAQLRRN 180
Query: 190 HQY---NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V+HG+ C++R P C C + C+
Sbjct: 181 DVRGRQELHALIVVHGKTYCRSR-PVCADCPLLRDCRH 217
>gi|55378639|ref|YP_136489.1| endonuclease III [Haloarcula marismortui ATCC 43049]
gi|55231364|gb|AAV46783.1| endonuclease III [Haloarcula marismortui ATCC 43049]
Length = 278
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 34/231 (14%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA------ 77
E + + K + + +V +LS ++D A L
Sbjct: 31 RAETVVDRLGEMY-WTKTY-GGRDAYECLVRTILSQNTSDKASQPAHDDLMARYGGGEDA 88
Query: 78 ---------DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------- 119
D + + + +L I + G+Y +KSE II+L+ + E+
Sbjct: 89 NSEGDIDSTDLARALADADQPELAETISSAGLYNQKSERIIALAQRICEEYGGEAGFDAF 148
Query: 120 --DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK-TP 175
D+ L + G+G K A+ +L A G VDTH+ RI+ R+GLAP
Sbjct: 149 VRDSDPEAVRSTLLDMNGVGPKTADCVLLFAGGRGGVFPVDTHVHRIARRMGLAPADADH 208
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLC 222
V L R +P H ++ GR C ARKP C +C ++ C
Sbjct: 209 ETVRAYLERDVPAAKCGFGHTAIIQFGREYCSARKPACLDDPDACPLAGHC 259
>gi|289208913|ref|YP_003460979.1| HhH-GPD family protein [Thioalkalivibrio sp. K90mix]
gi|288944544|gb|ADC72243.1| HhH-GPD family protein [Thioalkalivibrio sp. K90mix]
Length = 216
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 12/210 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ E+ + + + F ++V +L+ ++ NV +A +L +
Sbjct: 4 RVSEVRQRLQGAYGDLQ-WWPAESAFEVMVGAVLTQNTSWTNVERAIANLRAGDVLDPES 62
Query: 84 LAIGEKKL-QNYIRTIGIYRKKSENIISLSHILINEF------DNKIPQTLEGLTRLPGI 136
L ++ +IR G + K++ + L L + + L + G+
Sbjct: 63 LLELPHEILAEHIRPSGYFNVKADRLRHLLRFLEQQGGVEALARMETEALRSALLSVKGV 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR--IIPPKHQ-YN 193
G + A+ I+ AF P VD + R+ R+GL + + + + P +
Sbjct: 123 GPETADDIVLYAFERPVFVVDAYTRRLFERLGLPHARGAYDDLRVWVESELGPDAQAFND 182
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
H +V HG+ C+ KP CQ C +S++C
Sbjct: 183 LHALIVEHGKQRCRP-KPLCQGCPLSDVCP 211
>gi|289580004|ref|YP_003478470.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|289529557|gb|ADD03908.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
Length = 278
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 26/224 (11%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA------ 77
E + ++ + + FT +V +LS ++D A L +
Sbjct: 38 RAERVVDRLGERY--WQKTYGGQDAFTCLVRTILSQNTSDKASQPAHDALIDRYGHSSSR 95
Query: 78 -DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF-----------DNKIPQ 125
D + + +L I + G+Y +KS +I + + +EF D
Sbjct: 96 ADLAAALAHAEQSQLAETISSAGLYNQKSAMLIDAAEWVCDEFGSADEFDRFVTDETPDT 155
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK-TPNKVEQSLL 183
E L + G+G K A+ +L A G VDTH+ RI R+G+AP + +V L
Sbjct: 156 VRETLLDVRGVGPKTADCVLLFAGGRGGVFPVDTHVHRIYRRMGIAPPEADHEEVRTVLE 215
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCK 223
+P H + GR C ARKP C ++C ++++C+
Sbjct: 216 AEVPAAKCGFGHTATIQFGREFCTARKPACLEDPEACPMADICE 259
>gi|284036648|ref|YP_003386578.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
gi|283815941|gb|ADB37779.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
Length = 241
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 13/210 (6%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ + + Y + ++ +LS ++T N A + + E +++
Sbjct: 15 HQRLNEHYGIQPIQ-GYSDPMHELIGTILSHRTTHANEVMAYRTMRERFPQWEQVRDAPL 73
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRLPGIGRK 139
L + IR+ K+ I +L L E + LT+LPGIG K
Sbjct: 74 PDLIDAIRSANYPEIKAPYIQNLLTHLFRETGQANVDFLGQLSTEDAMAWLTKLPGIGMK 133
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQ--YNAHY 196
A ++L F P + VDTH+ R++ R+GL K K LL +P +N H
Sbjct: 134 TATILLLFKFQKPVLPVDTHVHRVTQRLGLIGPKVSAEKAHTILLSYLPLDALVLFNFHK 193
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
HG+ VC P+C C++ +C +
Sbjct: 194 HFYWHGQRVCTWYFPKCSECVLQTMCDYYQ 223
>gi|34451620|gb|AAQ72367.1| TspRI [Thermus sp. R]
Length = 225
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 76/184 (41%), Gaps = 7/184 (3%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + L V +L A++ V++ + L + + E +L+ +R +G R ++
Sbjct: 34 EDPYVLFVVEVLLARTRAERVSEVARELVQRWPEFCSLARADEAELEQMLRPLGFQRVRA 93
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ + + + +P E + LP GR AN +L + + VD ++ R+ +
Sbjct: 94 SALKRAAEEVCTRWGGNLPLEEEKIASLPRSGRYVANAVLIYSTCARKVAVDVNVARVVS 153
Query: 166 RIGLAPGKTPNKVEQSLLRI-------IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
R+ E++L + + ++ L+ GR +C KP+C C +
Sbjct: 154 RVFGFILVNGKDREENLWALAQRLVECTSGCEVRSLNWALLDVGREICHPTKPRCPLCPV 213
Query: 219 SNLC 222
+C
Sbjct: 214 REIC 217
>gi|322418099|ref|YP_004197322.1| HhH-GPD family protein [Geobacter sp. M18]
gi|320124486|gb|ADW12046.1| HhH-GPD family protein [Geobacter sp. M18]
Length = 221
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 13/210 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L E++ + F + V +L+ + +NV KA +L +
Sbjct: 9 RLLELYDALYRHYG-ALNWWPADTPFEVCVGAILTQNTNWLNVEKAIVNLKREGLLSVEA 67
Query: 84 LAIGEKK-LQNYIRTIGIYRKKSENIISLSHIL-------INEFDNKIPQTLEGLTRLPG 135
+ + L IR G + KS + L F + L ++ G
Sbjct: 68 IQEIHRDRLAELIRPSGFFNVKSVRLKGFVGWLLERHGSLDAMFRGDWRALRDELIKVRG 127
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPKHQ--Y 192
+G + + IL A P+ VD + R+ +R+G+ ++V + +PP
Sbjct: 128 VGPETCDSILLYAGEKPSFVVDAYTRRLFSRLGVVKEDDDYHRVRSLFMEHLPPDVPLFN 187
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V + C+ +KP C C + ++C
Sbjct: 188 EYHALIVEQCKRHCR-KKPSCDGCPLRHVC 216
>gi|325088276|gb|EGC41586.1| endonuclease III [Ajellomyces capsulatus H88]
Length = 533
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V + T + +LA+ +L I+++G + K++ I + + IL +E+++ IP
Sbjct: 335 VWDQNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPP 394
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 395 TVEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 454
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 455 WLPKDKWHEINKLLVGLGQTVCLPVARRCGECELAGTGLCKS 496
>gi|220931064|ref|YP_002507972.1| HhH-GPD family protein [Halothermothrix orenii H 168]
gi|219992374|gb|ACL68977.1| HhH-GPD family protein [Halothermothrix orenii H 168]
Length = 224
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTP 80
L EI++ K+ P+ + F +I+ +L+ + NV KA ++L + P
Sbjct: 14 KAGLNEIYHRLYKKFG-PQHWWPADSRFEVIIGAILTQAVSWQNVEKAIENLKKHKVLYP 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN--------EFDNKIPQTLEGLTR 132
+++L + E+ L I+ G Y K+ I + + L F + + + L
Sbjct: 73 EELLHLEEEILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQEPLSKIRDKLLE 132
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRIIPPKH- 190
+ GIG + A+ IL A P +D + RI +RIG ++ ++ +P +
Sbjct: 133 VYGIGPETADSILLYAGEFPVFVIDAYTKRIFSRIGYIEENIGYHTLQKMIMDNLPARTG 192
Query: 191 -QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
H LV G+ +CK P C+ C ++
Sbjct: 193 IYNEYHALLVALGKEICKKNNPLCEKCPLN 222
>gi|296109162|ref|YP_003616111.1| HhH-GPD family protein [Methanocaldococcus infernus ME]
gi|295433976|gb|ADG13147.1| HhH-GPD family protein [Methanocaldococcus infernus ME]
Length = 220
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLA 85
+I+ + + F +I+ +L + V K + + + +K+L
Sbjct: 2 KIYEKLLNTYGY-QNWWPAETRFEVIIGSILVQGTQWSRVEKVIEEMKKRDLIDEEKILK 60
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRLPGI 136
I E +L N IR +G Y++K+ + L+ ++N + + E L + GI
Sbjct: 61 IDEDELINIIRKVGYYKRKARALKELTGFIVNNYGSTDEMAKSDESLISLREKLLSIKGI 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--QYNA 194
G++ A+ IL A T V+ + R+ R+ + K K+++ IP
Sbjct: 121 GKETADSILLYALDRETFVVNAYTKRLFGRLNIIHEKDYEKIKRFFESQIPRDLKIYKEY 180
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ +V H + C+ + P+C +C + N+C
Sbjct: 181 NALIVEHCKRACR-KVPKCLTCPLKNICPY 209
>gi|91793226|ref|YP_562877.1| Iron-sulfur cluster loop [Shewanella denitrificans OS217]
gi|91715228|gb|ABE55154.1| Iron-sulfur cluster loop [Shewanella denitrificans OS217]
Length = 77
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 53/72 (73%)
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
+DTHIFR++NR APGK +VE +L+++P + + + H+W +LHGRY C ARKP+C S
Sbjct: 1 MDTHIFRMANRTRFAPGKNVQEVEDRMLKVVPSEFKVDVHHWFILHGRYTCLARKPRCGS 60
Query: 216 CIISNLCKRIKQ 227
CII +LC+ ++
Sbjct: 61 CIIEDLCEFKEK 72
>gi|308182316|ref|YP_003926443.1| DNA glycosylase MutY [Helicobacter pylori PeCan4]
gi|308064501|gb|ADO06393.1| DNA glycosylase MutY [Helicobacter pylori PeCan4]
Length = 289
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + + T + + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVIERFYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E +++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHHSQLPNDYQSLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|154273841|ref|XP_001537772.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415380|gb|EDN10733.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 532
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V + T + +LA+ +L I+++G + K++ I + + IL +E++ IP
Sbjct: 335 VWDQNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNFDIPP 394
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 395 TVEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 454
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 455 WLPKDKWHEINKLLVGLGQTVCLPVARRCGECELAGTGLCKS 496
>gi|212526280|ref|XP_002143297.1| DNA repair protein Ntg1, putative [Penicillium marneffei ATCC
18224]
gi|210072695|gb|EEA26782.1| DNA repair protein Ntg1, putative [Penicillium marneffei ATCC
18224]
Length = 418
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 54/275 (19%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGE------LYYVN------HFTL 51
+KK G+ + + + +I P+ + L++ F
Sbjct: 120 AKKIKREDGSVEIQPPSNWETMYDIVKKMRAANPTAPVDTMGCANLHWRTSPPKEQRFHT 179
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEI----------------------------------- 76
+VA++LS+Q+ D A + L
Sbjct: 180 LVALMLSSQTKDTVTAVAMQRLHTELGQEGEQNQTNASPSKPLIKKEEDDDTDGIKLGSA 239
Query: 77 ----ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
T Q +LA+ ++L I ++G + K++ I ++ IL +++D+ IP T E L +
Sbjct: 240 NKDSTLTVQNILAVSPERLNQMIWSVGFHNNKTKYIKQVAEILRDQYDSDIPTTPEELMK 299
Query: 133 LPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPG+G K A + +S A+G VD H+ RI+N G K P + +L +P
Sbjct: 300 LPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNMWGWHATKNPEETRIALQSWLPRDKW 359
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ + LV G+ C +C C ++ LCK
Sbjct: 360 HEINKLLVGLGQTACLPVGRKCGECDLAGTGLCKS 394
>gi|240282136|gb|EER45639.1| endonuclease III [Ajellomyces capsulatus H143]
Length = 533
Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V + T + +LA+ +L I+++G + K++ I + + IL +E+++ IP
Sbjct: 335 VWDQNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPP 394
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 395 TVEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 454
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 455 WLPKDKWHEINKLLVGLGQTVCLPVARRCGECELAGTGLCKS 496
>gi|290983237|ref|XP_002674335.1| predicted protein [Naegleria gruberi]
gi|284087925|gb|EFC41591.1| predicted protein [Naegleria gruberi]
Length = 316
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F ++V+++LS+Q+ D A + L E + +M + EK++Q+ I +G Y++KS
Sbjct: 135 FQVLVSLMLSSQTKDQITAAAVRKLQENNVLSVAEMNKLSEKEIQDLIYPVGFYKRKSTY 194
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNR 166
+ + IL+ ++D+ IP+T++ L LPG+G K A + +S A VDTH+ RISNR
Sbjct: 195 LKKVCKILLEKYDSDIPKTVKELCDLPGVGPKMAYLCMSSALKQTVGIGVDTHVHRISNR 254
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
+ KTP + L +P + ++ LV G+ VCK
Sbjct: 255 LEWVNTKTPEQTRMKLEEFVPQEEWDVINHMLVGFGQTVCKP 296
>gi|254581382|ref|XP_002496676.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
gi|238939568|emb|CAR27743.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
Length = 360
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
L+ A++LS+Q+ D +A +++ + + K+ + L I+++G
Sbjct: 137 QLLTALMLSSQTKDEVTAQAMENIMQYSMEEFKITQGITLETLLRIDEKKLDELIKSVGF 196
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+ +K++ + ++ IL+N FD+ IP L G+ LPG+G K + L A+G VD H
Sbjct: 197 HTRKAKYVKQMAQILVNTFDSDIPTDLPGILSLPGVGPKMGILALQKAWGKMDGIGVDLH 256
Query: 160 IFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R+ G KTP + L +P + Y + LV G+ +C +R +C C
Sbjct: 257 VDRLCKMWGWVDAKKCKTPEHTRKQLESWLPRELWYEINPLLVGFGQVICMSRGKRCDLC 316
Query: 217 IISNLCKRI 225
+ +++C +
Sbjct: 317 LANDVCNAV 325
>gi|225559205|gb|EEH07488.1| DNA base excision repair N-glycosylase 1, mitochondrial precursor
[Ajellomyces capsulatus G186AR]
Length = 535
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
V + T + +LA+ +L I+++G + K++ I + + IL +E+++ IP
Sbjct: 336 VWDQNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAVILRDEYNSDIPP 395
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
T+EGL RLPG+G K A + +S A+G VD H+ RI+N G KTP + +L
Sbjct: 396 TVEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALES 455
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+P + + LV G+ VC +C C ++ LCK
Sbjct: 456 WLPKDKWHEINKLLVGLGQTVCLPVARRCGECELAGTGLCKS 497
>gi|171184906|ref|YP_001793825.1| HhH-GPD family protein [Thermoproteus neutrophilus V24Sta]
gi|170934118|gb|ACB39379.1| HhH-GPD family protein [Thermoproteus neutrophilus V24Sta]
Length = 225
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 41 GELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
L + + + +++A +L ++T V K L + +P + ++L+ ++
Sbjct: 25 RSLPWRVSGSPWHVLLAAVLLRKTTVAQVLKVWPRLVQRYSSPSALAGADRERLEEDLKP 84
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G+ R ++ ++ L+ +L + + ++P E L LPG+G A+ +L + G+P +D
Sbjct: 85 LGLERVRARLLLELAELLCSRYRCEVPCRREDLEGLPGVGPYIASEVLLLGCGVPAPLLD 144
Query: 158 THIFRISNR-----IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL--VLHGRYVCKARK 210
+ R+ R T + ++ + P + + +WL V GR VC+ +
Sbjct: 145 RNAIRVLERALGLKSDRRRPHTDPALWRAAQMLTPVELRLARCFWLGVVDLGRKVCRPKN 204
Query: 211 PQCQSCIISNLCKR 224
P+C +C + ++C+
Sbjct: 205 PRCGACPLKDVCRY 218
>gi|23010115|ref|ZP_00050917.1| COG0177: Predicted EndoIII-related endonuclease [Magnetospirillum
magnetotacticum MS-1]
Length = 271
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 92/235 (39%), Gaps = 15/235 (6%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
S + +P + EI + P + ++ + +++ LLS ++ +
Sbjct: 29 PAPRRSRRAEAPAPSDALRDKALEIHRRLCGVYDCPIPYFHSLDPLSELISSLLSHRTRN 88
Query: 64 VNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE----- 118
+ +A K L + ++++ IR + K+ I ++ +
Sbjct: 89 ADSGRAFKALRARWPDWAAVEEAPVEEVEETIRGVTWPELKAPRIKAVLAAVRERVGALD 148
Query: 119 ----FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLA--- 170
+ + + L +PGIG K + +LS + + VD+H R++ R GL
Sbjct: 149 LAFLEEMSVDEARGWLEGIPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGPK 208
Query: 171 --PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
G + + L + Y+ H L+LHG+ VC R P C C++ ++C
Sbjct: 209 VDVGPSHGMLRAQLPADWSAQKLYDNHEVLMLHGQRVCFHRSPACDRCVLLDICP 263
>gi|91201716|emb|CAJ74776.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 216
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ L +I+ P+ F +I+ +L+ + NV KA ++ ++
Sbjct: 2 KMSKKNTLLKIYRKMYDSLG-PQQWWPGETPFEIIIGAILTQNTNWSNVEKAINNIKKVN 60
Query: 78 D-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN--------EFDNKIPQTLE 128
TP+ + ++ +L +R G + K++ + + + L + F E
Sbjct: 61 KLTPKGIHSLSLPELAELVRPSGFFNVKAKRVKTFVNWLFSKYEGNLTAMFHQDCRTLRE 120
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIP 187
L + GIG + A+ IL A +PT +D + RI +R GL P ++ ++++ +P
Sbjct: 121 ELLSINGIGPETADSILLYAGNMPTFVIDAYTHRIFSRHGLVPEESAYDEMKSFFEDNLP 180
Query: 188 P--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
K H +V G+ CK ++ C+ C +
Sbjct: 181 EDTKLFNEYHALIVNIGKLFCKPKR-VCEQCPLLEF 215
>gi|322437279|ref|YP_004219491.1| iron-sulfur cluster loop [Acidobacterium sp. MP5ACTX9]
gi|321165006|gb|ADW70711.1| iron-sulfur cluster loop [Acidobacterium sp. MP5ACTX9]
Length = 241
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 86/218 (39%), Gaps = 15/218 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ EI + P + N + LLS+++ ++ + L T + +
Sbjct: 14 RIIEIDRRLLAHYGQPPPRDVW-NPLDQFIYSLLSSRTKTEQSHQVMRDLRARFGTWENL 72
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRLP 134
+++ ++ I K+ + + + + L +
Sbjct: 73 RDAAVAEIEQTLQIITFPEVKALWLKKDLMEITARCGELSLEFLAKYRTNKIRSWLEQFE 132
Query: 135 GIGRKGANVILSMAF-GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--- 190
G+G K + +++ + + VD+H R++ R+GL P E+ L+R IP
Sbjct: 133 GVGAKTSAAVVNFSTLRRRALCVDSHHLRVTQRLGLTPRADAAITEERLMRKIPADWDAI 192
Query: 191 QYNAHYWLVL-HGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + H+ L+ HG+ +C +P C+ C + ++C ++
Sbjct: 193 KLDDHHSLIKKHGQELCTFAEPHCRRCPLLDMCPEGQK 230
>gi|255713108|ref|XP_002552836.1| KLTH0D02552p [Lachancea thermotolerans]
gi|238934216|emb|CAR22398.1| KLTH0D02552p [Lachancea thermotolerans]
Length = 383
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP---------QKMLAIGEKKLQNYIRTIG 99
F L++A++LS+Q+ D KA +L E M I ++ + I +
Sbjct: 138 FQLLIALMLSSQTKDEVNAKAMFNLVEYCKEELGEPEGVTLDAMFKIDQETIAQLIYPVS 197
Query: 100 IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDT 158
Y +K+ I +L + FD +P + GL LPG+G K + L A+G VD
Sbjct: 198 FYTRKALYIKKTIELLRDNFDGDMPPDIAGLVSLPGVGPKMGYLALQKAWGKVDGIGVDV 257
Query: 159 HIFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
H+ R+ P + L +P ++ Y + LV G+ +C R +C
Sbjct: 258 HVDRLCKMWKWVDPSKAKSPEHTRKLLEEWLPYEYWYEINPVLVGFGQVICLPRGKRCDL 317
Query: 216 CIISNLCKR 224
C+ S++C
Sbjct: 318 CMASDVCNA 326
>gi|293191843|ref|ZP_06609304.1| putative A/G-specific adenine glycosylase [Actinomyces
odontolyticus F0309]
gi|292820426|gb|EFF79411.1| putative A/G-specific adenine glycosylase [Actinomyces
odontolyticus F0309]
Length = 278
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 8/183 (4%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + +V ++S Q+ V E TP + A + +G +
Sbjct: 7 SDWGTLVFEIMSQQTPIARVQPIWLEWMERWPTPADVAAASSADIIVAWANLGYPSRALR 66
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + ++ + ++P +L+ LT LPG+G A+ +L+ GI +DT++ R+ R
Sbjct: 67 -LKACAAAIVEKHGGEVPLSLKELTLLPGVGTYTASALLAFRHGIRVPVLDTNVRRVLVR 125
Query: 167 I----GLAPGKTPNKVE-QSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
P TP+K E ++P L+ G VC P C C I
Sbjct: 126 FLDGREFPPHTTPSKAETMRADAMLPEDGHKAAEVSLSLMEFGALVCSQLSPSCDECTIH 185
Query: 220 NLC 222
+ C
Sbjct: 186 DNC 188
>gi|255513717|gb|EET89982.1| HhH-GPD family protein [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 252
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-ADTPQK 82
++ ++ + + + F +I +L+ Q++ NV KA +L A P K
Sbjct: 37 DIPALYKILLRHFG-FRSWWPGETQFEIIAGAILTQQTSWSNVEKAITNLKSHGALDPAK 95
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN-------EFDNKIPQTLEGLTRLPG 135
+ ++ E++LQ IR+ G YR+K++ + ++S +I+ + L + G
Sbjct: 96 IASMPEERLQKLIRSSGFYRQKAKRLKAVSKHIISSSGSVKAFLSKDKAALRKELLSMDG 155
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--HQY 192
IG + A+ +L A G VD + RI +R+ K ++++ +P
Sbjct: 156 IGPETADSVLLYAAGKRIFVVDAYTKRIMSRLYGTNPKIGYDELQSHFHAELPKSVSIYK 215
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ H LV G+ CK KP+C C + CK K
Sbjct: 216 DMHAQLVELGKNYCK-TKPECSPCPLKGGCKYYK 248
>gi|291539544|emb|CBL12655.1| A/G-specific DNA glycosylase [Roseburia intestinalis XB6B4]
Length = 354
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 33/203 (16%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V + + + E +L +G + N+ + ++
Sbjct: 1 MLQQTRVEAVKPYFERFTTALPDAKALAVCPEDELLKLWEGLG-CYNRVRNMQKAAVEVV 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ ++P E L +L GIG A + S+A+GIP VD ++ R+ R+
Sbjct: 60 ENYGGQLPADYEKLLKLKGIGHYTAGAVASIAYGIPVPAVDGNVLRVLTRVSADDTDIMK 119
Query: 177 K-VEQSLLRIIPP------------------------------KHQYNAHYWLVLHGRYV 205
+ + +++ + L+ G +
Sbjct: 120 QSFRNEMEKLLEKLMHGADGRNEKNVFPWMEDADDLRAKVYHQNLAGAFNQALMELGATI 179
Query: 206 CKAR-KPQCQSCIISNLCKRIKQ 227
C P C C + C+ KQ
Sbjct: 180 CVPNGAPLCTECPWKDFCEAKKQ 202
>gi|239614218|gb|EEQ91205.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ER-3]
Length = 415
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +E ++ + + K E V ++ V V +
Sbjct: 165 VAAVKKREEARQMIKKEENEGQTFKREAQGDVKVETKVEEEQERETKKVLVWDRNNQHTK 224
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + +LA+ +L IRT+G + K++ I + + IL +E+++ IP T EGL RLPG
Sbjct: 225 STLTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPG 284
Query: 136 IGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+G K A + +S A+G VD H+ RI+N G KTP + +L +P +
Sbjct: 285 VGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALESWLPKDKWHEV 344
Query: 195 HYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ LV G+ VC +C C ++ LCK
Sbjct: 345 NKLLVGLGQTVCLPVARRCGECELAGTGLCKS 376
>gi|261204483|ref|XP_002629455.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
gi|239587240|gb|EEQ69883.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
Length = 416
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +E ++ + + K E V ++ V V +
Sbjct: 166 VAAVKKREEARQMIKKEENEGQTFKREAQGDVKVETKVEEEQERETKKVLVWDRNNQHTK 225
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
T + +LA+ +L IRT+G + K++ I + + IL +E+++ IP T EGL RLPG
Sbjct: 226 STLTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPG 285
Query: 136 IGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
+G K A + +S A+G VD H+ RI+N G KTP + +L +P +
Sbjct: 286 VGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGWHKTKTPEETRAALESWLPKDKWHEV 345
Query: 195 HYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ LV G+ VC +C C ++ LCK
Sbjct: 346 NKLLVGLGQTVCLPVARRCGECELAGTGLCKS 377
>gi|160902966|ref|YP_001568547.1| HhH-GPD family protein [Petrotoga mobilis SJ95]
gi|160360610|gb|ABX32224.1| HhH-GPD family protein [Petrotoga mobilis SJ95]
Length = 216
Score = 72.6 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 12/209 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQK 82
++ EI+ + P+ N F + V +L+ + NV K+ ++L + P+K
Sbjct: 3 KVYEIYKDLYGFYG-PQHWWPADNWFEVTVGAILTQNTAWNNVEKSIENLKQRDLLEPEK 61
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPG 135
+ I E L IR+ G Y KS+ + + L + E L + G
Sbjct: 62 LSKIKEDDLAQLIRSSGFYNLKSKRLKNFLEWLKKYNYDIDKIKNKSVTSLREELLSIKG 121
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYN 193
IG++ A+ IL AF +P +D + R+ +R+GL + ++ + + +
Sbjct: 122 IGKETADSILLYAFEMPVFVIDAYTKRMFSRLGLILSREYDEFQDFFEKNLTKDVQLYNE 181
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + CK + P+C C + C
Sbjct: 182 YHALIVKHSKVYCK-KTPKCSDCFLKEKC 209
>gi|223993751|ref|XP_002286559.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977874|gb|EED96200.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 175
Score = 72.6 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 71/175 (40%), Gaps = 14/175 (8%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + V+ ++ Q+ +V + T + E+++ ++ +G YR +S
Sbjct: 1 TAYGVWVSEIMLQQTRVESVIPYYLKWMDKFPTVHDLANASEEEVNSHWAGLGFYR-RSR 59
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + ++ ++ +P T++ L ++ GIGR A+ + S+A+G+ VD ++ R+ +R
Sbjct: 60 LLHAGAKRVVKDYKGIVPNTVDELLKIEGIGRYTASAVASIAYGVEVPVVDGNVCRVLSR 119
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKH-------------QYNAHYWLVLHGRYVCKA 208
+ V + L + + L+ G C
Sbjct: 120 LTGVANHIKAGVMKDDLGWTLAERIVKANGEGERVGTPGEVNQALMELGATYCSP 174
>gi|307596439|ref|YP_003902756.1| HhH-GPD family protein [Vulcanisaeta distributa DSM 14429]
gi|307551640|gb|ADN51705.1| HhH-GPD family protein [Vulcanisaeta distributa DSM 14429]
Length = 232
Score = 72.6 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIYRK 103
+ F ++ +L+ + D N +A ++L + TPQ+++ IGE L N I+ G++R
Sbjct: 32 NDIFKALIVTILTQNTNDRNALRAYENLIRVAGDITPQRLIGIGEDALANAIKPAGMHRI 91
Query: 104 KSENIISLSHILINEF--------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
++ II LS +++ + D+ + + + L LPG+G K A+VIL + G PT
Sbjct: 92 RARKIIELSRVILERYGGDLTWIVDSPLDEARKALLELPGVGEKTADVIL-VNLGKPTFP 150
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRII--PPKHQYNAHYWLVLHGRYVCKARKPQC 213
VDTHI RIS R+G+ + +++++ + I+ P H L+ GR VC+AR P+C
Sbjct: 151 VDTHITRISIRLGIVKSRNYREIQKAWMGILTPDPSRYLEVHLKLIQFGRDVCRARNPRC 210
Query: 214 QSCIISNLCKRI 225
C +C
Sbjct: 211 DMCGFKEVCNYY 222
>gi|225849644|ref|YP_002729878.1| endonuclease III [Persephonella marina EX-H1]
gi|225645619|gb|ACO03805.1| endonuclease III [Persephonella marina EX-H1]
Length = 213
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYY-VNHF-TLIVAVLLSAQSTDVNVNKATKHLFEIA 77
++ EI+ + Y N F + +L+ ++ NV KA K+L +
Sbjct: 1 MEESKILEIYRTLLDFFGYQNWWPVYSDNPFVEISFGAILTQNTSWKNVEKALKNLIDED 60
Query: 78 D-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+K+ I E+KLQ I+ G Y++KS +I S + T + L + GI
Sbjct: 61 LVDLEKVSCIHEEKLQEIIKPAGFYKRKSRTLIEFSRRFKDIEK--DKITRDLLLSVKGI 118
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLRIIPPKH--QYN 193
G++ A+ IL A P VD + R+ +RI + +++++ + +P
Sbjct: 119 GKETADSILLYALNRPYFVVDAYTRRVFSRIGFFDKNLSYDEIQELFEKNLPEDTDIYKE 178
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V G+ C+ +KP C+ C + CK
Sbjct: 179 YHALIVELGKSFCR-KKPLCKDCPLFANCKF 208
>gi|313672755|ref|YP_004050866.1| hhh-gpd family protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939511|gb|ADR18703.1| HhH-GPD family protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 212
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
I+ ++ K + F + + +L+ ++ NV ++ ++L + +P+K+L +
Sbjct: 3 IYRYLFNRYGDLK-WWPAESAFEVAIGAILTQNTSWRNVERSIENLKKFELLSPEKILGL 61
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ--------TLEGLTRLPGIGR 138
+L N IR G Y +K+E +I S ++ E + I + L L G+G
Sbjct: 62 DFSELANLIRPSGFYNQKAERLIIFSRFILEECNGDIKYLNKLETADARKRLLLLKGVGP 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--QYNAHY 196
+ A+ IL A +D + R+ NR+G+ + + +++++ ++P + H
Sbjct: 122 ETADSILLYACDHTIFVIDKYTMRMFNRVGMGWSEKYDIFQKNIMELLPHDLNIYRHYHA 181
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+V + + C++ KP C+ C I+ +CK+I
Sbjct: 182 LIVENSKNYCRS-KPFCEGCPIAKICKKI 209
>gi|323473767|gb|ADX84373.1| HhH-GPD family protein [Sulfolobus islandicus REY15A]
gi|323476417|gb|ADX81655.1| HhH-GPD family protein [Sulfolobus islandicus HVE10/4]
Length = 227
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-----------------NHFTLIVAVLLSAQSTDVNVN 67
+ +I + + K L + +I++ +L S V
Sbjct: 2 VRKILDTLLEIFENNKSILKEKGWIVSSETSYEWWDGLKSAEEIIISAILVQMSRWEIVK 61
Query: 68 KATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + K+ E++L + ++ I Y+ K + +I+LS I+IN +
Sbjct: 62 GKVEEMRSKGLTDFYKLYNTTEQELYDVLKGINFYKTKVKRLINLSKIIINLGSVEKFYD 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L + GIG + A+ IL A P + R+ +R+ K N+V++ + +
Sbjct: 122 RNLLLSIDGIGEETADSILLFAGHKPNFPPSEYGKRVLSRVLGISIKKKNEVKRLVEENL 181
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V GR C P+C+ CI+ +CK ++
Sbjct: 182 ERNVYEYKLLHAGIVTVGRAFCFIENPKCEDCILKKVCKYYRE 224
>gi|157363140|ref|YP_001469907.1| HhH-GPD family protein [Thermotoga lettingae TMO]
gi|157313744|gb|ABV32843.1| HhH-GPD family protein [Thermotoga lettingae TMO]
Length = 223
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-A 77
+ K L +I+ + + P+G + F +IV +L+ ++ NV KA ++ + A
Sbjct: 1 MDVRKFLLKIYKILYGSYG-PQGWWPAESWFEVIVGAVLTQNTSWNNVEKAIHNIRKAGA 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK----IPQTLEGLTRL 133
P + + +L I++ G Y K+ + +L +L + T E L +
Sbjct: 60 LDPVILFRLRNDQLSQLIKSAGFYNLKTVRLKNLLSLLSEYNFDFHSLSRNITREILLNV 119
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
GIG++ A+ IL AF P VD + R+ R+G+ K Q++ +P
Sbjct: 120 NGIGKETADSILLYAFDKPVFVVDNYTKRVFERLGILNKKDSYDKIQAIFHDLPKDTGLY 179
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + +C KP+C C + C
Sbjct: 180 KEYHALIVKHAKDICLKNKPKCNICCVKGFC 210
>gi|317008814|gb|ADU79394.1| DNA glycosylase MutY [Helicobacter pylori India7]
Length = 289
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + + T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVVERFYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQ 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|239617764|ref|YP_002941086.1| HhH-GPD family protein [Kosmotoga olearia TBF 19.5.1]
gi|239506595|gb|ACR80082.1| HhH-GPD family protein [Kosmotoga olearia TBF 19.5.1]
Length = 212
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQK 82
LEEI+ L + P+G F +IV +L+ NV +A ++L A P+K
Sbjct: 4 RLEEIYCLLYDVYG-PQGWWPADTQFEVIVGAVLTQNVAWKNVERAIENLKNADALEPEK 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK--IPQTLEGLTRLPGIGRKG 140
++ + ++KL I+ G Y KSE ++ ++ ++E + + L ++ GIG++
Sbjct: 63 LIGLEKEKLALLIKPTGFYNAKSETLLRVTKAYLSERWEDLSTKELRKRLLKIKGIGKET 122
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNAHYWL 198
A+ I+ AF VD + R R+G+ +T ++V++ + P + H +
Sbjct: 123 ADSIILYAFDRAIFVVDKYTVRFVTRLGITTHETYDEVQRIFHEQLKPDVELYKEYHALI 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V H + CK ++P C C I + CK K+
Sbjct: 183 VEHAKKYCK-KQPDCAGCFIGD-CKFRKE 209
>gi|149908207|ref|ZP_01896871.1| endonuclease III, putative (nth2) [Moritella sp. PE36]
gi|149808749|gb|EDM68682.1| endonuclease III, putative (nth2) [Moritella sp. PE36]
Length = 230
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 12/212 (5%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P L +IF + + ++V +L+ + NV KA +L TPQ
Sbjct: 19 PTRLNDIFIQLMRHYGHLP-WWPADTEYEMMVGAILTQNTNWKNVEKALANLAGKL-TPQ 76
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL-------EGLTRLP 134
++LA+ L IR+ G Y +K+ + +L+ + L +
Sbjct: 77 QILAMPVDTLAQLIRSSGYYNQKAIKLKALTLWYQEYDFDISQARCIEGTILRNELLAVN 136
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQY 192
GIG + A+ IL A +D + RI +RIG +K+ L + IP
Sbjct: 137 GIGPETADSILVYALDKTFFIIDNYTRRILHRIGFELPTGYDKLRLLLEQNIPRDITTYQ 196
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H LV H + C + PQCQ C ++ C++
Sbjct: 197 QYHALLVEHAKRYCT-KIPQCQHCPLNKCCQK 227
>gi|146419315|ref|XP_001485620.1| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 17/207 (8%)
Query: 34 LKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG-- 87
+ P + + F L+++++L +Q+ D A K L + +
Sbjct: 210 ERIPLKIRPHGFDSPRTYRFQLLISLMLLSQTKDEVNFAAIKTLDDELMKRGFPNGLCLE 269
Query: 88 ------EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
E+ + I+ +G + +K+ I S +L + IP + + LPG+G K
Sbjct: 270 AVLATSEQDINQCIQKVGFHHRKAGYIKRASQMLHDNHSGDIPDNIRDIVALPGVGPKMG 329
Query: 142 NVILSMAFGIPTIG-VDTHIFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
++L + VD HI R++ G A +TP + L +P + + + L
Sbjct: 330 YLLLQRGWYKNEGIGVDVHIHRLAQMWGWVSAKARTPEQTRLELESWLPRRLWGDINPIL 389
Query: 199 VLHGRYVCKARKPQCQSCII--SNLCK 223
V G+ +C C C + LCK
Sbjct: 390 VGFGQVICPPNYGNCDICTLGKQKLCK 416
>gi|332672984|gb|AEE69801.1| A/G-specific adenine glycosylase [Helicobacter pylori 83]
Length = 289
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVIERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCALCPLNPYC 166
>gi|321260781|ref|XP_003195110.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii
WM276]
gi|317461583|gb|ADV23323.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
gattii WM276]
Length = 452
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 95/245 (38%), Gaps = 23/245 (9%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH------------FT 50
+ K P +E ++ + +P E+ F
Sbjct: 102 AKKPLPQVALAKPHSAPAKWEEQYQLIEKMRRGFVAPVDEMGCERPRTNAEGDPKTFRFH 161
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIAD---TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
++++++LS+Q+ D + A L T + + +Q I +G +R+K+E
Sbjct: 162 ILISLMLSSQTKDAVTSAAVTSLHTSLPGGLTAASLATAPLETIQECINKVGFWRRKAEY 221
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLP---GIGRKGANVILSMAFGIPTIG-VDTHIFRI 163
I + L+ + ++ + + L G+G K A + L A+ I VD H+ RI
Sbjct: 222 IQEAAKSLLEQEGDEKGDVPKTVEGLCKLKGVGPKMAFLALQCAWDINAGIGVDVHVHRI 281
Query: 164 SNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--S 219
+NR+ T P + +L +PP + +V G+ +C P+C C++
Sbjct: 282 TNRLKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLMVGFGQVICLPVGPRCDICLLGQK 341
Query: 220 NLCKR 224
+C
Sbjct: 342 EICPS 346
>gi|325968210|ref|YP_004244402.1| DNA-(apurinic or apyrimidinic site) lyase [Vulcanisaeta moutnovskia
768-28]
gi|323707413|gb|ADY00900.1| DNA-(apurinic or apyrimidinic site) lyase [Vulcanisaeta moutnovskia
768-28]
Length = 231
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 44 YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI--ADTPQKMLAIGEKKLQNYIRTIGIY 101
+ F +V +L+ + D N +A ++L I TP+K++ IGE L N I+ G++
Sbjct: 30 NSNDIFKALVVTILTQNTNDKNALRAYENLVRIIGDITPEKLVNIGEDALANAIKPAGMH 89
Query: 102 RKKSENIISLSHILINEFDN--------KIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
R ++ II LS +++ + + + + L LPG+G K A+VIL + G
Sbjct: 90 RIRARKIIELSRVILENYRGDLTWIKDLPLDEARKALLELPGVGEKTADVIL-VNLGKLA 148
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--PPKHQYNAHYWLVLHGRYVCKARKP 211
VDTHI RIS R+G+A + ++++++ +RI+ P H L+ GR +C AR P
Sbjct: 149 FPVDTHITRISIRLGIAKSRNYHEIQRAWMRILTPDPSRYLEIHLKLIQFGRDICIARNP 208
Query: 212 QCQSCIISNLCKRI 225
+C C +C
Sbjct: 209 RCDMCGFREVCTYY 222
>gi|114556233|ref|XP_001155201.1| PREDICTED: mutY homolog isoform 1 [Pan troglodytes]
Length = 371
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---- 176
+ LPG+GR A I S+AFG T VD ++ R+ R+ +
Sbjct: 22 HMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVS 81
Query: 177 -KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ +++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 82 QQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQR 133
>gi|308183938|ref|YP_003928071.1| DNA glycosylase MutY [Helicobacter pylori SJM180]
gi|308059858|gb|ADO01754.1| DNA glycosylase MutY [Helicobacter pylori SJM180]
Length = 289
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQISTVIERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E +++P + L +LPGIG AN IL F T VD +I R+ GL P
Sbjct: 60 VKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLNPNIH 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNLYC 166
>gi|71911370|ref|YP_282920.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS5005]
gi|71854152|gb|AAZ52175.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS5005]
Length = 333
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 6/168 (3%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ Q+ V K E + + E++L +G Y + N+ + ++
Sbjct: 1 MLQQTQVNTVIPYYKRFLEWFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVM 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAP 171
+F P T + + L GIG A I S++F +P VD ++ R+ +
Sbjct: 60 VDFGGIFPHTYDDIASLKGIGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGD 119
Query: 172 GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
K + + +I P + + L+ G + A+ P+ I
Sbjct: 120 PKNRKIFQAIMEILIDPDRPGDFNQALMDLGTDIESAKTPRPDESPIR 167
>gi|261839006|gb|ACX98771.1| hypothetical protein HPKB_0150 [Helicobacter pylori 52]
Length = 290
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 56 LLSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
++S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MMSQQTQINTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEI 59
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGK 173
+ E ++++P + L +LPGIG AN IL F VD +I R+ GL P
Sbjct: 60 CVKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNI 119
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
T ++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 TAKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCTLCPLNPYC 167
>gi|188526946|ref|YP_001909633.1| DNA glycosylase MutY [Helicobacter pylori Shi470]
gi|188143186|gb|ACD47603.1| A/G-specific adenine glycosylase [Helicobacter pylori Shi470]
Length = 289
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQISTVVERFYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|297790670|ref|XP_002863220.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309054|gb|EFH39479.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 495
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 36/222 (16%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNK 68
L++ E E+I + + +L + + + V+ ++ Q+ V
Sbjct: 71 LFSENETEKIRMGMLDWYDVNQRDLPWRKRRSESEKERRAYEVWVSEIMLQQTRVQTVMD 130
Query: 69 ATKHLFEIADTPQK-------------------MLAIGEKKLQNYIRTIGIYRKKSENII 109
K + T L G+ ++ +G YR+ +
Sbjct: 131 YYKRWMQKWPTIYDLAQASLEEMGKDKMKKELAYLCFGKLEVNEMWAGLGYYRRARFLLE 190
Query: 110 SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL 169
++ + + L ++ GIG A I S+AF VD ++ R+ R+
Sbjct: 191 GAKMVVAGKDGFPNQAS--SLMKVKGIGEYTAGAIASIAFNEAVPVVDGNVIRVLARLKA 248
Query: 170 APGKTPNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
++ + +++ P + + L+ G +C
Sbjct: 249 ISANPKDRLTARNFWKLAAQLVDPSRPGDFNQSLMELGATLC 290
>gi|229583846|ref|YP_002842347.1| HhH-GPD family protein [Sulfolobus islandicus M.16.27]
gi|238618769|ref|YP_002913594.1| HhH-GPD family protein [Sulfolobus islandicus M.16.4]
gi|228018895|gb|ACP54302.1| HhH-GPD family protein [Sulfolobus islandicus M.16.27]
gi|238379838|gb|ACR40926.1| HhH-GPD family protein [Sulfolobus islandicus M.16.4]
Length = 227
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-----------------NHFTLIVAVLLSAQSTDVNVN 67
+ +I + + K L + +I++ +L S V
Sbjct: 2 VRKILDTLLEIFENNKSILKEKGWIVSSETSYEWWDGLKSAEEIIISAILVQMSRWEIVK 61
Query: 68 KATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + K+ E++L + ++ I Y+ K + +I+LS I+IN +
Sbjct: 62 SKVEEMRSKGLTDFYKLYNTTEQELYDVLKGINFYKTKVKRLINLSKIIINLGSVEKFYD 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L + GIG + A+ IL A P + R+ +R+ K N+V++ + +
Sbjct: 122 RNLLLSIDGIGEETADSILLFAGHKPNFPPSEYGKRVLSRVLGISIKKKNEVKRLVEENL 181
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V GR C P+C+ CI+ +CK ++
Sbjct: 182 ERNVYEYKLLHAGIVTVGRAFCFIENPKCEDCILKKVCKYYRE 224
>gi|78186833|ref|YP_374876.1| HhH-GPD [Chlorobium luteolum DSM 273]
gi|78166735|gb|ABB23833.1| HhH-GPD [Chlorobium luteolum DSM 273]
Length = 285
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 74/202 (36%), Gaps = 5/202 (2%)
Query: 13 NSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH---FTLIVAVLLSAQSTDVNVNKA 69
++ L +++ + + + + + ++V+ ++ Q+ V
Sbjct: 6 STSAPSLPCKEQVRLFQEHIFSFYQLHRRSFPWRSALSRYAVMVSEVMLQQTQAERVVPK 65
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
P + + + +G + + + +++ + ++P T
Sbjct: 66 YLEWMRRFPDPGTLAVAPLRDVLELWSGLGYNSRALR-LQECARLVVAMYQGELPATPRE 124
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI-IPP 188
L LPGIG I + A + VDT+I RI P ++P +V Q+ + +P
Sbjct: 125 LKALPGIGEYSCRSIPAFADNLNVAAVDTNIRRILIHEFSLPEESPQRVLQAFADLVLPE 184
Query: 189 KHQYNAHYWLVLHGRYVCKARK 210
+ H L+ +G +++
Sbjct: 185 GRSRDWHNALMDYGALQLTSKR 206
>gi|51893804|ref|YP_076495.1| putative endonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|51857493|dbj|BAD41651.1| putative endonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 263
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 19/220 (8%)
Query: 25 LEEIFYLFSL------KWPSPKGELYYV-NHFTLIVAVLLSAQSTDVNVNKATKHL-FEI 76
+ E++ WPS F +I +L N KA + L
Sbjct: 14 VAEVYRRLLEAFGPRHWWPSALEPPPAKAQPFEMIAGAILVQNVAWSNAAKAVRALAEAG 73
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG------- 129
M A + ++ IR +R+K++ + + ++N + +P L
Sbjct: 74 LLDVAAMDAAPAEAVEPLIRPAAYFRQKAQRLKGFAAHVMNRYGGDLPAMLRRPADELRA 133
Query: 130 -LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRIIP 187
L LPGIG + A+ IL A G P + +D + RI R+G AP ++ P
Sbjct: 134 ELLALPGIGPETADCILCYAAGRPVMAMDAYTRRIFARLGVFAPDARYEAMQAFFHGWTP 193
Query: 188 PK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ H + G +C R P+C C +++LC R+
Sbjct: 194 ADAQLRGEYHALIDTLGNRLCLKRNPRCGQCPLADLCPRV 233
>gi|317179946|dbj|BAJ57732.1| A/G-specific adenine glycosylase [Helicobacter pylori F32]
Length = 289
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + + T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVIERFYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCALCPLNPYC 166
>gi|330834042|ref|YP_004408770.1| DNA-(apurinic or apyrimidinic site) lyase [Metallosphaera cuprina
Ar-4]
gi|329566181|gb|AEB94286.1| DNA-(apurinic or apyrimidinic site) lyase [Metallosphaera cuprina
Ar-4]
Length = 224
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 43 LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI-RTIGIY 101
L + F +VA +L+ ++D + KA L L+ + ++ + ++IG+Y
Sbjct: 31 LKTRDPFKSLVATILTQNTSDKSAKKAFDLLESKVGVTPSNLSNADLEVIKFCIKSIGLY 90
Query: 102 RKKSENIISLSHILINEFD--------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
KS I L+ + + + LTR+ GIG K +V+L G T
Sbjct: 91 NNKSITIRELARFIQETYHGDINKLLDVDPELARKELTRIKGIGNKTVDVVLLTCKGYKT 150
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VDTHIFRIS R+G+ V + + NAH L+ HGR CKA P+C
Sbjct: 151 FPVDTHIFRISKRLGIKGNYKV--VSEFWKNSVYDTL--NAHLILITHGRKTCKAINPKC 206
Query: 214 QSCIISNLCKRI 225
+SC+I++ C+
Sbjct: 207 ESCMINDCCRYY 218
>gi|317149841|ref|XP_001823231.2| hypothetical protein AOR_1_1642114 [Aspergillus oryzae RIB40]
Length = 886
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 52/273 (19%)
Query: 4 SKKSDSYQ-----GNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH-- 48
++++ + + G+ + + P+ ELY+ +
Sbjct: 119 TRRAPARKIKDEDGSFKVEPPSNWDTIYATVKKMREANPTAPVDTMGCAELYWRASSPRD 178
Query: 49 --FTLIVAVLLSAQSTDVNVNKATKHLFEI-----ADTPQKMLAIGEKK----------- 90
F +VA++LS+Q+ D A + L A + + E
Sbjct: 179 RRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEKPLR 238
Query: 91 ----------------LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
L I +G + K++ I + + IL +++ + IP T E L +LP
Sbjct: 239 DSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMKLP 298
Query: 135 GIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
G+G K A + +S A+G VD H+ RI+N G KTP ++L +P +
Sbjct: 299 GVGLKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWNKTKTPEDTRKALESWLPKDKWHE 358
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
+ LV G+ VC +C C ++ LCK
Sbjct: 359 INKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKS 391
>gi|242221333|ref|XP_002476417.1| predicted protein [Postia placenta Mad-698-R]
gi|220724324|gb|EED78375.1| predicted protein [Postia placenta Mad-698-R]
Length = 258
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL----------KWPSPKGELYYVNH---- 48
S +K S TP+ E + + +L
Sbjct: 1 SPRKQTSVAKALATPHP-TPERWREAYDTIKDMRSRIIAPVDTMGCDRPQLEETTPQNQR 59
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKS 105
F +V+++LS+Q+ D A L + A+ + I +G +R+K+
Sbjct: 60 FATLVSLMLSSQTKDEVTFAAVCKLRAAIGGALSVDALLAADDSAIGEAICKVGFWRRKT 119
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT----IGVDTHIF 161
+ I + IL +EF++ +P+T+E L LPG+G K A + L A+ + IGVD H+
Sbjct: 120 QYIKRATQILRDEFNSDVPKTVEELCSLPGVGPKMAFLALQDAWKLQVVNVGIGVDVHVH 179
Query: 162 RISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
RI+NR+G KTP + +L +P + + LV G+ VC P+C +C +S
Sbjct: 180 RITNRLGWHKPLTKTPEETRVNLESWLPLELHPKINALLVGFGQTVCLPVGPRCDTCELS 239
Query: 220 N-LCKRIK 226
N LC +
Sbjct: 240 NGLCPSAR 247
>gi|147920603|ref|YP_685600.1| endonuclease III [uncultured methanogenic archaeon RC-I]
gi|110620996|emb|CAJ36274.1| predicted endonuclease III [uncultured methanogenic archaeon RC-I]
Length = 307
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 12/210 (5%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
E+ + + L + + ++ +L+ T + K L
Sbjct: 85 NELLLRLKEYYKN-CWALKLHDPYISLIITILTQNKTADSARKTFHRLQHHYKGIDVYKM 143
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTRLPGIG 137
K + K++ II S +I+ + + E L L G+G
Sbjct: 144 ASADKKELEELIRTSGPYKADFIIRCSQEIIDRWGGSLEWMRTAPTQEAREALMSLYGVG 203
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKH--QYNA 194
K A+ +L A G + VDTHI R+S R GL+ ++ + + KH A
Sbjct: 204 PKTADCVLLFALGHSVVAVDTHICRVSERTGLSLATGDSEAAKRRVKEDLERKHRIPGMA 263
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H ++ GR CKA P C + ++C +
Sbjct: 264 HLLIINLGRDFCKAVLPLHHECPVEDICPK 293
>gi|315586145|gb|ADU40526.1| A/G-specific adenine glycosylase [Helicobacter pylori 35A]
Length = 289
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVIERFYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCTLCPLNPYC 166
>gi|145219738|ref|YP_001130447.1| HhH-GPD family protein [Prosthecochloris vibrioformis DSM 265]
gi|145205902|gb|ABP36945.1| HhH-GPD family protein [Chlorobium phaeovibrioides DSM 265]
Length = 289
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 72/185 (38%), Gaps = 5/185 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E WP+ + + + ++++V+ + Q+ V E
Sbjct: 19 IEAFHSKIFSSWPACRRTFPWRETRDRYSVMVSECMLQQTQAERVVPKYSAWIERFPDAA 78
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ +++ + +G + + + ++++F+ ++P + L LPGIG
Sbjct: 79 TLAHASLREVLSLWSGLGYNSRAQR-LQRSAVQVMDKFNGEVPSSPLLLKTLPGIGEYSC 137
Query: 142 NVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
I + A + VDT+I RI L P K+++ ++P + H L+
Sbjct: 138 RSIPAFADNLDVAAVDTNIRRILITEFSLPETLPPAKLQRLADAVLPVGRSRDWHNALMD 197
Query: 201 HGRYV 205
+G V
Sbjct: 198 YGSRV 202
>gi|317011986|gb|ADU82594.1| DNA glycosylase MutY [Helicobacter pylori Lithuania75]
Length = 289
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
E+++++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 AKEYNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQ 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|15789648|ref|NP_279472.1| endonuclease III [Halobacterium sp. NRC-1]
gi|169235361|ref|YP_001688561.1| DNA-(apurinic or apyrimidinic site) lyase endonuclease III
[Halobacterium salinarum R1]
gi|10580010|gb|AAG18952.1| endonuclease III [Halobacterium sp. NRC-1]
gi|167726427|emb|CAP13212.1| DNA-(apurinic or apyrimidinic site) lyase endonuclease III
[Halobacterium salinarum R1]
Length = 265
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 90/244 (36%), Gaps = 31/244 (12%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTD 63
S+ + G P L E++ + + F +V +LS ++D
Sbjct: 15 SRPTTFASGADPTQAALVVDRLGELY--WQKTYGG-------RAAFECLVRTVLSQNTSD 65
Query: 64 VNVNKATKHLFEIA-----DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
A L + D + + L + I G+Y +KS II ++ + E
Sbjct: 66 KASQPAHDALMQRYGAAADDLAAALADADQDVLADTISMAGLYNQKSATIIRIADRVCEE 125
Query: 119 FDNKIPQTLEGLT-----------RLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNR 166
+ + G+G K A+ +L A G P VDTH+ RI+ R
Sbjct: 126 YGGADGFDAFVREGDPDAVRAALLDMTGVGPKTADCVLLFAGGAPGVFPVDTHVHRIARR 185
Query: 167 IGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNL 221
+G+AP V +L +P H ++ GR C AR P C +C ++
Sbjct: 186 MGIAPAAADHEAVRAALEAAVPDAACGFGHTAMIQFGREYCTARDPACLDDPAACPLAEH 245
Query: 222 CKRI 225
C R+
Sbjct: 246 CDRV 249
>gi|317181452|dbj|BAJ59236.1| A/G-specific adenine glycosylase [Helicobacter pylori F57]
Length = 289
Score = 72.3 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + + T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVVERFYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCTLCPLNPYC 166
>gi|119357322|ref|YP_911966.1| HhH-GPD family protein [Chlorobium phaeobacteroides DSM 266]
gi|119354671|gb|ABL65542.1| HhH-GPD family protein [Chlorobium phaeobacteroides DSM 266]
Length = 298
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 5/191 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++E + + + + ++V+ ++ Q+ V + +
Sbjct: 28 DIELFHQKILGFHKDNRRSFPWRETTDRYAIMVSEIMLQQTQADRVTEKYQAWMRRFPDI 87
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + + +G + + + + + + F+ +P L LPGIG
Sbjct: 88 RTLADASLRDVLALWSGLGYNSRGQR-LQNCAREIEDRFNGVVPSLPTELKTLPGIGDYT 146
Query: 141 ANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
I A + VDT+I RI + L + ++++ +++P H L+
Sbjct: 147 CRSIPVFADNLDVAAVDTNIRRIIIHEFALPEDISKSQIQAVAEQLLPIGRSRLWHNALM 206
Query: 200 LHGRYVCKARK 210
+G +R
Sbjct: 207 DYGALFLTSRN 217
>gi|284173633|ref|ZP_06387602.1| HhH-GPD family protein [Sulfolobus solfataricus 98/2]
gi|261600983|gb|ACX90586.1| HhH-GPD family protein [Sulfolobus solfataricus 98/2]
Length = 227
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+I++ +L S V + + K+ E++L + ++ I Y+ K + +
Sbjct: 44 EIIISAILVQMSRWEIVKNKVEEMRNKGLTDFYKLYNTSEEELYSVLKGINFYKTKVKRL 103
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
I++S I+++ + L + GIG++ A+ IL A P + R+ +R+
Sbjct: 104 INISKIVVDLGTIEKFYDRNLLLSIDGIGQETADSILLFAGHKPNFPPSEYGKRVLSRVL 163
Query: 169 LAPGKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K ++V++ + + P H +V GR C +KP+C+ CI+ +CK
Sbjct: 164 GTSIKKKDEVKRMVEENLEPDVYKYKLLHAGIVTVGRAFCFTKKPKCEDCILKKVCKYYG 223
Query: 227 Q 227
+
Sbjct: 224 E 224
>gi|300706268|ref|XP_002995417.1| hypothetical protein NCER_101695 [Nosema ceranae BRL01]
gi|239604508|gb|EEQ81746.1| hypothetical protein NCER_101695 [Nosema ceranae BRL01]
Length = 264
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
+ GIGRK + + L+ + + I VDTH+ RI N + + KTP++ + L II K
Sbjct: 168 CLSIKGIGRKISILYLNKFYRLEGISVDTHVHRICNLLYICKTKTPDETSKILETIIDMK 227
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ LV +G+ +CK R P+C CI+ + C K
Sbjct: 228 EWSEFNSVLVGYGQVLCKPRGPKCTECIVKDNCSNFK 264
>gi|298242246|ref|ZP_06966053.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
gi|297555300|gb|EFH89164.1| HhH-GPD family protein [Ktedonobacter racemifer DSM 44963]
Length = 239
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + S + + + + VA +L ++T V +A + +
Sbjct: 17 ARASWLRGQLLSWFRSCGRTFPWRDPGREPYEITVAEVLLQRTTAAGVARAYRGFIKRYP 76
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + L+ +R +G++R+K+ + L+ + IP + + RL GIG
Sbjct: 77 SWASLALTPLEDLERALRPLGLWRQKALVLQHLAQSIEEHGGT-IPCSRTEIERLRGIGP 135
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIG----LAPGKTPNKVEQSLLRIIPPKHQYNA 194
A+ +L++ +G +D ++ R+ NR A + + L ++ +
Sbjct: 136 YTASAVLAIVYGQTEPLLDVNMVRLLNRFFGPTERAGEGRNRSLHRLALLLVSGEQCLQV 195
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ ++ G VCKAR+P CQ C + C ++
Sbjct: 196 NWSVLDFGALVCKARRPHCQECQLKVECWYVR 227
>gi|317176959|dbj|BAJ54748.1| A/G-specific adenine glycosylase [Helicobacter pylori F16]
Length = 289
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINMVIERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCALCPLNPYC 166
>gi|308061432|gb|ADO03320.1| DNA glycosylase MutY [Helicobacter pylori Cuz20]
Length = 289
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + + T + + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQINTVIERFYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|332981861|ref|YP_004463302.1| DNA-3-methyladenine glycosylase III [Mahella australiensis 50-1
BON]
gi|332699539|gb|AEE96480.1| DNA-3-methyladenine glycosylase III [Mahella australiensis 50-1
BON]
Length = 226
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTP 80
+L I+ + + P+ F ++V +L+ VNV KA ++L E A P
Sbjct: 5 KAKLMNIYDILYSCFG-PRHWWPADTPFEVMVGAILTQNVAWVNVEKAIRNLKEADALEP 63
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTR 132
K+ + ++L+ I+ G Y +K+ + +S ++ + + + L
Sbjct: 64 SKLAYMDLERLKALIKPTGFYNQKAPRLQHMSRYIVERCGGRVDSLFEGDMYEVRGVLLS 123
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK-- 189
PGIG + A+ +L A P +D + R+ +R+ L P K + + +P
Sbjct: 124 WPGIGPETADAMLLYAGNKPIFVIDAYTRRVFSRLCLLPSDVSYEKAQAYFMSNLPNDVQ 183
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H + + +C R P C C +S C+ ++
Sbjct: 184 LFNEYHALVDELAKRMCLKRNPSCGRCPLSQ-CRWAQK 220
>gi|322371204|ref|ZP_08045756.1| DNA-(apurinic or apyrimidinic site) lyase [Haladaptatus
paucihalophilus DX253]
gi|320549194|gb|EFW90856.1| DNA-(apurinic or apyrimidinic site) lyase [Haladaptatus
paucihalophilus DX253]
Length = 268
Score = 71.9 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 22/220 (10%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA---DTP 80
EE+ + + + FT +V +LS ++DV A L D
Sbjct: 32 RAEEVVDRLGELY--WQKTYGGQDAFTCLVRTILSQNTSDVASQPAHDDLVARYGGGDLA 89
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH-----------ILINEFDNKIPQTLEG 129
+ + +L + IR+ G+Y +K++ II + + + +
Sbjct: 90 ETLAKADHGELADTIRSAGLYNQKADVIIESAERVLADFGSAAAFDEFVREEEPNEVRSE 149
Query: 130 LTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIP 187
L + G+G K A+ +L + G VDTH+ RI R+G+AP V + L R +P
Sbjct: 150 LLDMNGVGPKTADCVLLFSGGQSGVFPVDTHVHRIYRRMGIAPADADHEDVREVLEREVP 209
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCK 223
+ H + GR C ARKP C ++C + +LC+
Sbjct: 210 AEKCGFGHTASIQFGREYCSARKPACLDGPEACPMFDLCE 249
>gi|331243824|ref|XP_003334554.1| hypothetical protein PGTG_15983 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313544|gb|EFP90135.1| hypothetical protein PGTG_15983 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 458
Score = 71.9 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTP---QKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+V+++LS+Q+ D +AT +L + +++N I +G ++KK++ I
Sbjct: 136 LVSLMLSSQTKDEVTAQATLNLRLHLKDSLTVDSLRNASLTEIENCINKVGFWKKKAQYI 195
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRI 167
++ L + ++ +P+TL G+G K A + LS A+ I IGVDTH+ RISNR+
Sbjct: 196 KLMADDLFLKHESDVPKTL-------GVGPKMAFLALSNAWAINLGIGVDTHVHRISNRL 248
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISN---LCKR 224
G P +L +P ++ LV G+ +C P+C+ C + LC
Sbjct: 249 GWLQTSDPEATRINLESWLPRDLFQEINHLLVGFGQVICLPVGPKCEDCYVGKVPGLCPS 308
Query: 225 IK 226
K
Sbjct: 309 SK 310
>gi|308063002|gb|ADO04889.1| DNA glycosylase MutY [Helicobacter pylori Sat464]
Length = 289
Score = 71.9 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 57 LSAQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V + E T + + + +++ R +G Y +++N+ + I
Sbjct: 1 MSQQTQISTVVERFYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKT 174
+ E ++++P + L +LPGIG AN IL F + VD +I R+ GL P T
Sbjct: 60 VKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIT 119
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++ + +N + L+ G +C KP+C C ++ C
Sbjct: 120 AKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPLNPYC 166
>gi|76802666|ref|YP_330761.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
gi|76558531|emb|CAI50123.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
Length = 268
Score = 71.9 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 20/197 (10%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHL---FEIADTPQKMLAIGEKKLQNYIRTIGIYR 102
+ F +V +LS ++D A L + D + + L I G+Y
Sbjct: 50 RDGFECLVRTVLSQNTSDTASQPAHDALLERYGGGDLAAALADADQPTLAETISGAGLYN 109
Query: 103 KKSENIISLSHILINEF-----------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+KS +I+L+ ++ + + + E L L G+G K A+ +L + G
Sbjct: 110 QKSTRLIALAEFVVETYGGADGFDGFVTEAPPDEVRETLLELNGVGPKTADCVLLFSGGR 169
Query: 152 P-TIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
VDTH+ RI+ R+GLAP V +L +P + H ++ GR C AR
Sbjct: 170 DGVFPVDTHVHRIARRMGLAPADADHEAVRSALEADVPGEKCGFGHTAMIQFGREYCTAR 229
Query: 210 KPQC----QSCIISNLC 222
KP C ++C +++ C
Sbjct: 230 KPACLDDPEACPLADRC 246
>gi|15899225|ref|NP_343830.1| DNA endonuclease III (ntH-2) [Sulfolobus solfataricus P2]
gi|227829324|ref|YP_002831103.1| HhH-GPD family protein [Sulfolobus islandicus L.S.2.15]
gi|229578097|ref|YP_002836495.1| HhH-GPD family protein [Sulfolobus islandicus Y.G.57.14]
gi|284996683|ref|YP_003418450.1| HhH-GPD family protein [Sulfolobus islandicus L.D.8.5]
gi|13815787|gb|AAK42620.1| DNA endonuclease III (ntH-2) [Sulfolobus solfataricus P2]
gi|227455771|gb|ACP34458.1| HhH-GPD family protein [Sulfolobus islandicus L.S.2.15]
gi|228008811|gb|ACP44573.1| HhH-GPD family protein [Sulfolobus islandicus Y.G.57.14]
gi|284444578|gb|ADB86080.1| HhH-GPD family protein [Sulfolobus islandicus L.D.8.5]
Length = 227
Score = 71.9 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-----------------NHFTLIVAVLLSAQSTDVNVN 67
+ +I + + K L + +I++ +L S V
Sbjct: 2 VRKILDTLLKIFENNKSILKEKGWIVSSETSYEWWDGLKSAEEIIISAILVQMSRWEIVK 61
Query: 68 KATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + K+ E++L + ++ I Y+ K + +I+LS I+IN +
Sbjct: 62 SKVEEMRSKGLTDFYKLCNTTEQELYDVLKGINFYKTKVKRLINLSKIIINLGSVEKFYN 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L + GIG + A+ IL A P + R+ +R+ K N+V++ + +
Sbjct: 122 RNLLLSIDGIGEETADSILLFAGHKPNFPPSEYGKRVLSRVLGISIKKKNEVKRLVEENL 181
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V GR C P+C+ CI+ +CK ++
Sbjct: 182 ERNVYEYKLLHAGIVTVGRAFCFIENPKCEDCILKKVCKYYRE 224
>gi|116747801|ref|YP_844488.1| HhH-GPD family protein [Syntrophobacter fumaroxidans MPOB]
gi|116696865|gb|ABK16053.1| DNA-3-methyladenine glycosylase III [Syntrophobacter fumaroxidans
MPOB]
Length = 222
Score = 71.5 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 16/217 (7%)
Query: 19 LYTPKE--LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ T + + IF + P+ F +IV +L+ ++ NV +A +L +
Sbjct: 1 MMTDRNGLIRLIFDRLHGFFG-PQNWWPADTPFEVIVGAILTQNTSWKNVARAVANLRDH 59
Query: 77 ADTPQK-MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTL 127
+ + A+ E L IR+ G Y +K+ + + +
Sbjct: 60 GLLSFEALCAVPEPLLAELIRSSGYYNQKARKLKAFCRHVCETGHAGLDGFLAQDTDTLR 119
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRII 186
L R+ G+G + A+ I+ A P+ VDT+ R+ +R G + +++ + +
Sbjct: 120 SELLRIRGVGPETADSIVLYAAHKPSFVVDTYTHRVFSRHGWVQESPSYDELRGFFMDCL 179
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
P H LV G C+ + P+C C + L
Sbjct: 180 EPDVGLFQELHALLVRTGHLFCR-KTPRCGGCPLEGL 215
>gi|254561880|ref|YP_003068975.1| hypothetical protein METDI3481 [Methylobacterium extorquens DM4]
gi|254269158|emb|CAX25124.1| hypothetical protein METDI3481 [Methylobacterium extorquens DM4]
Length = 254
Score = 71.5 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI + P + ++ + +++ LLS ++ + + +A K L
Sbjct: 29 KDKALEIHRRLCGVYECPIPYFHSLDPLSELISSLLSHRTRNADSGRAFKALRARWPDWT 88
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTR 132
++ A ++++ I + K+ I ++ + D + + L
Sbjct: 89 EIGAASVEEIETTIHGVTWPELKAPRIKAVLAAVQERVGALTLDFLGDMSVDEARGWLEA 148
Query: 133 LPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PGIG K + +LS + + VD+H R++ R GL K ++LR P
Sbjct: 149 IPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGAKVDVGPSHAVLRAQLPDDW 208
Query: 192 Y-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ H L+LHG+ VC R P C C++ ++C
Sbjct: 209 SAQKLYDNHEVLMLHGQRVCFHRSPACDRCVLLDICP 245
>gi|332295602|ref|YP_004437525.1| HhH-GPD family protein [Thermodesulfobium narugense DSM 14796]
gi|332178705|gb|AEE14394.1| HhH-GPD family protein [Thermodesulfobium narugense DSM 14796]
Length = 219
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
E++ + K E N F ++ +LS +TD+N +A +L +I +
Sbjct: 1 MKKNYYEKLLDKLETYFG--KIERKDENFFHELIKAILSQNTTDLNSVQAYNNLIKIINN 58
Query: 80 --PQKMLAIGEKKLQNYIRTIGIYRKKSENII----------SLSHILINEFDNKIPQTL 127
K+++ I+ G+ +K++ + + S+I KI + +
Sbjct: 59 DLQNLSKDEFCDKIKDSIKIAGLNNQKTKTLHSLGKKFLQNKNYSNIEDYFKKMKISEIV 118
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP 187
E + GIG K + + P VDTHI RI R+ + + I
Sbjct: 119 EVFLSIDGIGLKTVSCAILFGLHKPAFPVDTHISRIVQRVKKKKISKKDIQIEIEGSIHD 178
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ H +L+ GR +C+A+K CQ C I LC+ +
Sbjct: 179 WEKLKALHLYLIELGRNICRAKKQNCQMCPIKELCEDYR 217
>gi|308125989|ref|ZP_05778508.2| endonuclease III [Vibrio parahaemolyticus K5030]
gi|308111306|gb|EFO48846.1| endonuclease III [Vibrio parahaemolyticus K5030]
Length = 62
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GKT + VEQ LL+++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 1 MGKTVDDVEQKLLKVVPKEFKLDVHHWLILHGRYTCLARKPRCGSCIIEDLCEYKEK 57
>gi|300712085|ref|YP_003737899.1| DNA-(apurinic or apyrimidinic site) lyase [Halalkalicoccus jeotgali
B3]
gi|299125768|gb|ADJ16107.1| DNA-(apurinic or apyrimidinic site) lyase [Halalkalicoccus jeotgali
B3]
Length = 267
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA---DTP 80
E + + ++ + + F +V +LS ++D A + L E D
Sbjct: 32 RAEAVVDVLGERY--WQKTYGGQDAFECLVRTILSQNTSDKASQPAHESLMERYGGGDLV 89
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT--------- 131
+ + +L I + G+Y +KS+ +I+ + + EF ++
Sbjct: 90 EALAEAHRDELAETISSAGLYNQKSDVMIAAAEEIREEFGSEAEFDAFVRESEPETVRSR 149
Query: 132 --RLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIP 187
+ G+G K A+ +L + G VDTH+ RI R+G+AP + V + L +P
Sbjct: 150 LLEINGVGPKTADCVLLFSGGRGGVFPVDTHVHRIYRRMGIAPPEADHEAVREVLEEQVP 209
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCKRI 225
+ H + GR C ARKP C ++C + + C+R+
Sbjct: 210 AEKCGFGHTASIQFGREFCSARKPACLDGPEACPLYDCCERV 251
>gi|323452320|gb|EGB08194.1| hypothetical protein AURANDRAFT_14127 [Aureococcus anophagefferens]
Length = 213
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATK--HLFEIADTPQKMLAIGEKKLQNYI--RTIGIYRKK 104
F +VA++LSA++TD + + T + A L+ + + R K
Sbjct: 35 FQTLVALILSARTTDEATMSCVRDLQWADGGLTADTLAAADASTLERALANHEVAFPRNK 94
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT--IGVDTHIFR 162
+ + + + + + +P+ L + LPG+G K A ++ A+G + VDTH R
Sbjct: 95 ARYLRRAAELCRDSYGGDVPRDLPSIRALPGVGDKVAALLTQAAWGDDAGGVAVDTHFHR 154
Query: 163 ISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
I+NR+G T ++ + +P A+ LV G+ VC P C+SC ++ C
Sbjct: 155 IANRLGWVATATAAATKRDVEAFLPRDRWVAANPLLVGFGQEVC-GYAPNCESCPVAA-C 212
Query: 223 K 223
Sbjct: 213 P 213
>gi|240139469|ref|YP_002963944.1| hypothetical protein MexAM1_META1p2915 [Methylobacterium extorquens
AM1]
gi|240009441|gb|ACS40667.1| hypothetical protein MexAM1_META1p2915 [Methylobacterium extorquens
AM1]
Length = 254
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI + P + ++ + +++ LLS ++ + + +A K L
Sbjct: 29 KDKALEIHRRLCGVYECPIPYFHSLDPLSELISSLLSHRTRNADSGRAFKALRARWPDWT 88
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTR 132
++ A ++++ I + K+ I ++ + D + + L
Sbjct: 89 EIEAASVEEIEATIHGVTWPELKAPRIKAVLAAVQERVGALTLDFLGDMSVNEARGWLEA 148
Query: 133 LPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PGIG K + +LS + + VD+H R++ R GL K ++LR P
Sbjct: 149 IPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGAKVDVGPSHAVLRAQLPDDW 208
Query: 192 Y-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ H L+LHG+ VC R P C C++ ++C
Sbjct: 209 SAQKLYDNHEVLMLHGQRVCFHRSPACGRCVLLDICP 245
>gi|284165866|ref|YP_003404145.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
gi|284015521|gb|ADB61472.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
Length = 269
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-----D 78
EE+ + + + FT +V +LS ++D A L + D
Sbjct: 31 RAEEVVDRLGELY--WQKTYGGQDAFTCLVRTVLSQNTSDKASQPAHDALIDRYGGPDVD 88
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF-----------DNKIPQTL 127
+ + +L I + G+Y +KSE +I + ++ EF D
Sbjct: 89 LAASLADAEQSRLAETISSAGLYNQKSEVLIRTAEWVLEEFGSAAAFDAFVKDEDPAAVR 148
Query: 128 EGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRI 185
E L + GIG K A+ +L A G VDTH+ RI R+G+AP ++ V L R
Sbjct: 149 ETLLSIRGIGPKTADCVLLFAGGRGGVFPVDTHVHRIYRRMGIAPAAADHEGVRAVLERE 208
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCK 223
+P H + GR C ARKP C +C ++++C+
Sbjct: 209 VPAAKCGFGHTATIQFGREYCTARKPACLEDPDACPMADVCE 250
>gi|289192102|ref|YP_003458043.1| HhH-GPD family protein [Methanocaldococcus sp. FS406-22]
gi|288938552|gb|ADC69307.1| HhH-GPD family protein [Methanocaldococcus sp. FS406-22]
Length = 222
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKM 83
+ I+ + + + + + ++V +L+ ++ NV KA +L +K+
Sbjct: 9 IYNIYRILLNYYGN-QNWWPAETRYEVVVGAILTQNTSWKNVEKAINNLKNENLLDEEKI 67
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG---------LTRLP 134
L + E KL+ I+ G Y K++ + +++ +++ + N L +
Sbjct: 68 LNVDEDKLKELIKPAGFYNLKAKRLKNVTKFIVDNYGNTEEMAKTDKDTLTLRAELLSIN 127
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH--Q 191
G+G++ A+ IL A + VD + R+ +R+G+ K +++++ + +P
Sbjct: 128 GVGKETADSILLYALDRESFVVDAYTKRMFSRLGIINEKAKYDEIKEIFEKSLPKDLEIY 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCII 218
H +V H + C+ +KP C +C I
Sbjct: 188 KEYHALIVEHCKKFCR-KKPLCDNCPI 213
>gi|289812124|ref|ZP_06542753.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 191
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 10/179 (5%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + L + + + ++ ++ Q+ V + T +
Sbjct: 12 DWYDKYGRKTLPWQINKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLD 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + + PQT + LPG+GR A ILS+A
Sbjct: 72 EVLHLWTGLGYYA-RARNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLAL 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRI----IPPKHQYNAHYWLVLHGR 203
G +D ++ R+ R G +VE +L + P + + ++ G
Sbjct: 131 GKHYPILDGNVKRVLARCYAVSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGA 189
>gi|255030371|ref|ZP_05302322.1| endonuclease III (DNA repair) [Listeria monocytogenes LO28]
Length = 85
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +VE++L R +P + +AH++++ GRY CKAR P+C +C + LC+ K+
Sbjct: 20 WKDSVVEVEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLRYLCREGKK 76
>gi|325968642|ref|YP_004244834.1| HhH-GPD family protein [Vulcanisaeta moutnovskia 768-28]
gi|323707845|gb|ADY01332.1| HhH-GPD family protein [Vulcanisaeta moutnovskia 768-28]
Length = 230
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 18/221 (8%)
Query: 24 ELEEIFYLFSL------KWP----SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
L EIF +P S + +++ +L Q+ V++ L
Sbjct: 7 RLIEIFRKMKDELESVGWYPVDAESTRWWGGAETPDEVVITAMLVQQTRWDVVHEVLNRL 66
Query: 74 FE-IADTPQKMLAIGEKKLQNYIRTIGIYRKK----SENIISLSHILINEFDNKIPQTLE 128
+ + + L I+ + K + +++ I +
Sbjct: 67 RRLSLNKLEVIANTDPNYLAEVIKGVNYRFTKAQRLVKFAKNVTMIGGLGKLRLRGDVRD 126
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQSLLRIIP 187
L G+GR+ A+ I+ A IPT+ + + R+ +R+ GL G + ++ L ++P
Sbjct: 127 FLLNQEGVGRETADSIMLFALNIPTMPISQYTKRVFSRLLGLKLGDNYDMWKEFLEGLLP 186
Query: 188 PKHQYN--AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
H ++ G+ C P C C + ++C +
Sbjct: 187 RDLYTYKLIHASIITIGKKYCLPTDPLCNKCPLRDVCLYAR 227
>gi|227826682|ref|YP_002828461.1| HhH-GPD family protein [Sulfolobus islandicus M.14.25]
gi|227458477|gb|ACP37163.1| HhH-GPD family protein [Sulfolobus islandicus M.14.25]
Length = 227
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-----------------NHFTLIVAVLLSAQSTDVNVN 67
+ +I + + K L + +I++ +L S V
Sbjct: 2 VRKILDTLLEIFENNKSILKEKGWIVSSETSYEWWDGLKSAEEIIISAILVQMSRWEIVK 61
Query: 68 KATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + K+ E++L + ++ I Y+ K + +I+LS I+IN +
Sbjct: 62 SKVEEMRSKGLTDFYKLYNTTEQELYDVLKGINFYKTKVKRLINLSKIIINLGSVEKFYD 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L + GIG + A+ IL A P + R+ +R+ K N+V++ + +
Sbjct: 122 RNLLLSIDGIGEETADSILLFAGHKPNFPPSEYGKRVLSRVLGISIKKKNEVKRLVEENL 181
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V GR C P+C+ CI+ +CK ++
Sbjct: 182 ELNVYEYKLLHAGIVTVGRAFCFIENPKCEDCILKKVCKYYRE 224
>gi|51892440|ref|YP_075131.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|51856129|dbj|BAD40287.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 232
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 30 YLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ ++ SP+ + + ++LS ++ + K L +L + +
Sbjct: 8 RALAARYGSPRHG-NPTDPTDCLFYLMLSRKTPIRTAARVYKRLRATVRGWDGLLGLTQV 66
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRLPGIGRKG 140
+L + G+ ++ ++++++ +L + F + L L LPG+G K
Sbjct: 67 ELVRLLWGSGLEEIRAGHLLAVAGLLRDRFGAVTLEPLRQWPDDECLAFLMSLPGMGMKT 126
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLV 199
A ++ P D H R+ R+G+ + ++ ++ L RI+P Y H LV
Sbjct: 127 ALCVMLYGLDRPVFPADAHCIRVLKRMGVIDARLAHRPAQRELARIVPGHLGYVLHVNLV 186
Query: 200 LHGRYVCKARKPQCQSCIISNLC 222
HG+ +C AR P+C C+++N C
Sbjct: 187 AHGQQICTARCPRCAECVVANYC 209
>gi|15669625|ref|NP_248438.1| endonuclease III [Methanocaldococcus jannaschii DSM 2661]
gi|41018436|sp|Q58829|Y1434_METJA RecName: Full=Putative endonuclease MJ1434
gi|1592082|gb|AAB99444.1| endonuclease III, putative (nth2) [Methanocaldococcus jannaschii
DSM 2661]
Length = 220
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQ 81
+ + +I+ + + + + ++V +L+ ++ NV +A +L
Sbjct: 7 EMIYKIYKILLDYYGH-QNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMEDLLEEV 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG---------LTR 132
K+L + E KL+ IR G Y K++ + +++ ++ + N L
Sbjct: 66 KILNVDEDKLKELIRPAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILRAELLS 125
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH- 190
+ G+G++ A+ IL A + VD + R+ +R+G+ K +++++ + +P
Sbjct: 126 INGVGKETADSILLYALDRESFVVDAYTKRMFSRLGVINEKAKYDEIKEIFEKNLPKDLE 185
Query: 191 -QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C+ +K C +C I C
Sbjct: 186 IYKEYHALIVEHCKKFCR-KKALCDNCPIKEFC 217
>gi|77920165|ref|YP_357980.1| putative endonuclease [Pelobacter carbinolicus DSM 2380]
gi|77546248|gb|ABA89810.1| DNA-3-methyladenine glycosylase III [Pelobacter carbinolicus DSM
2380]
Length = 232
Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 14/214 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TP 80
L + + + P + F +++ L+ + NV A L + TP
Sbjct: 18 KDTLLFLCNRLAEHFG-PLHWWPADSPFEVVIGAFLTQNTAWRNVELAIAALKKTIPLTP 76
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT--------LEGLTR 132
Q + A+ + L+ IR G +R+K++ + + L+ + + + L
Sbjct: 77 QALCALQRQDLEELIRPAGFFRQKAQRLQLFATCLLEKHQGDLDAMLSGPLSQVRQTLLT 136
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPP--K 189
GIG + A+ IL A P+ VD + R+ R G+ G T + + +P
Sbjct: 137 FKGIGPETADSILLYAGHRPSFVVDAYTRRLFKRYGVLEGDETYEDIRALFMAHLPRQVD 196
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
H +V + C+ ++P C++C + C
Sbjct: 197 LFNEYHALIVEQCKTFCR-KRPLCENCPLQPECP 229
>gi|322379337|ref|ZP_08053713.1| A/G-specific adenine glycosylase [Helicobacter suis HS1]
gi|321148250|gb|EFX42774.1| A/G-specific adenine glycosylase [Helicobacter suis HS1]
Length = 290
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Query: 57 LSAQSTDVNV-NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+S Q+ V +K + T + ++ + +G Y +++N+ + I
Sbjct: 1 MSQQTQIEVVLDKFYLPFLQAFPTLIDLANAPLDRVLLLWKGLGYYA-RAKNLHKSAQIC 59
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI-FRISNRIGLAPGKT 174
++ +P L LPGIG A+ IL F +DT++ + GL
Sbjct: 60 CQKYGGCLPSNYTDLLALPGIGAYSASAILCFGFRQNVGVLDTNVSRVLLRLFGLDLKSK 119
Query: 175 PNKV--EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K + + P + ++ + L+ G +C KP C C +S C
Sbjct: 120 NLKTLLQDKARTFVNPTNSFDHNQALIDLGSLICTP-KPSCHICPLSFSC 168
>gi|170286948|dbj|BAG13472.1| endonuclease III [uncultured Termite group 1 bacterium]
Length = 90
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
DTH+ RI+N + L P K+E+ L++ IP K+ N + + GR +CKAR P C
Sbjct: 20 DTHVIRITNLLKLTEYDDPVKIEKDLMKTIPKKYWMNFSFLIQTLGRIICKARNPGHIVC 79
Query: 217 IISNLCKRIKQ 227
++ +C ++
Sbjct: 80 PLNEICPSSQK 90
>gi|222099288|ref|YP_002533856.1| Repair endonuclease [Thermotoga neapolitana DSM 4359]
gi|221571678|gb|ACM22490.1| Repair endonuclease [Thermotoga neapolitana DSM 4359]
Length = 396
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 14/211 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE---IADTP 80
+LEE+ ++V +L+ + NV +A +++ E D
Sbjct: 179 KLEELHEELRSIHGPVGKWWP-GTPEEIMVTAILTQNTNWKNVERAMRNIEEALGKDDIL 237
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL-------TRL 133
+K+ ++ +++ + IR G + K++ + +L L N L ++
Sbjct: 238 EKLSSLSTERIAHLIRPAGFFNIKAKRLKALLEFLREYNFNLKLLKRMPLGALRELLLKI 297
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
GIG++ A+ IL A P VD++ R+ RI K +++++ + P
Sbjct: 298 KGIGKETADAILLYALEKPIFVVDSYTKRLLARIFNIELKDYDEIQKLFMSCYPHDVRLY 357
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C ++ P+C+ C + C
Sbjct: 358 QELHGLIVEHAKRFC-SKNPKCRECPLKKKC 387
>gi|26340274|dbj|BAC33800.1| unnamed protein product [Mus musculus]
Length = 310
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 22/45 (48%)
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+++ P + + + G VC ++P C C + +LC+ ++
Sbjct: 33 QQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQR 77
>gi|229583309|ref|YP_002841708.1| HhH-GPD family protein [Sulfolobus islandicus Y.N.15.51]
gi|228014025|gb|ACP49786.1| HhH-GPD family protein [Sulfolobus islandicus Y.N.15.51]
Length = 227
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV-----------------NHFTLIVAVLLSAQSTDVNVN 67
+ +I + + K L + +I++ +L S V
Sbjct: 2 VRKILDTLLKIFENNKSILKEKGWIVSSETSYEWWDGLKSAEEIIISAILVQMSRWEIVK 61
Query: 68 KATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + K+ E++L + ++ I Y+ K + +I+LS I+IN +
Sbjct: 62 SKVEEMRSKGLTDFYKLCNTTEQELYDVLKGINFYKTKVKRLINLSKIIINLGSVEKFYN 121
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
L + GIG + A+ IL A P + R+ +R+ K N+V++ + +
Sbjct: 122 RNLLLSIDGIGEETADSILLFAGHKPNFPPSEYGKRVLSRVLGISIKKKNEVKRLVEENL 181
Query: 187 PPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V GR C P+C+ CI+ +CK ++
Sbjct: 182 ERNVYEYKLLHAGIVTVGRAFCFIENPKCKDCILKKVCKYYRE 224
>gi|295099302|emb|CBK88391.1| Predicted EndoIII-related endonuclease [Eubacterium cylindroides
T2-87]
Length = 106
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK 189
L G+GRK ANV+ S+AF IP+ VDTH+ RIS R+GLA KVE+ L R I
Sbjct: 1 MSLAGVGRKTANVVRSVAFDIPSFAVDTHVDRISKRLGLAKPYDSVEKVEEKLKRKIDRD 60
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
H+ + GRY+C +R P+C C ++CK+ K
Sbjct: 61 RWNRGHHEFIFFGRYLCHSRNPECYRCPFIDICKKDK 97
>gi|58269828|ref|XP_572070.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113763|ref|XP_774466.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257104|gb|EAL19819.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228306|gb|AAW44763.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 452
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 23/245 (9%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL-----------KWPSPKGELYYVN-HFT 50
+ K P +E + + P E F
Sbjct: 102 AKKPLPQVALAKPHAAPAKWEEQYRLIEKMRRGIVAPVDDMGCERPRTNTEGDPKTFRFH 161
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE---KKLQNYIRTIGIYRKKSEN 107
++++++LS+Q+ D + A L ++ + +Q I +G +R+K+E
Sbjct: 162 ILISLMLSSQTKDAVTSAAVTSLHTSLPGGLSAASLAAAPLETIQECINKVGFWRRKAEY 221
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLP---GIGRKGANVILSMAFGIPTIG-VDTHIFRI 163
I + L+ + ++ + + L G+G K A + L A+ I VD H+ RI
Sbjct: 222 IQEAAKTLLEQEGDEKGDVPKTVEGLCKLKGVGPKMAFLALQCAWDINAGIGVDVHVHRI 281
Query: 164 SNRIGLAPGKT--PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII--S 219
+NR+ T P + +L +PP + +V G+ +C P+C C++
Sbjct: 282 TNRLKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLMVGFGQVICLPVGPRCDICLLGQK 341
Query: 220 NLCKR 224
+C
Sbjct: 342 EICPS 346
>gi|295395514|ref|ZP_06805709.1| endonuclease III [Brevibacterium mcbrellneri ATCC 49030]
gi|294971685|gb|EFG47565.1| endonuclease III [Brevibacterium mcbrellneri ATCC 49030]
Length = 84
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
++ ++K + + L + +I + + +P + EL + N F L++A +LSAQ
Sbjct: 4 VIPARKRRQFAQETRLAKVR---RARKIDRILAQVFPDARAELDFTNPFELLIATVLSAQ 60
Query: 61 STDVNVNKATKHLFEIADTPQ 81
+TDV VN+ T LF +
Sbjct: 61 TTDVRVNQVTPALFARYPSAH 81
>gi|55376682|ref|YP_134533.1| endonuclease III [Haloarcula marismortui ATCC 43049]
gi|55229407|gb|AAV44827.1| endonuclease III [Haloarcula marismortui ATCC 43049]
Length = 233
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENII 109
+V +LS D N +A++ LF + + +L + IR G+ +K+ I
Sbjct: 45 RQLVTTILSQNVADENTRRASEALFTAYSDFAAIESADHDELADTIRVAGLPDQKAARIQ 104
Query: 110 SL----------SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
++ L + LT + G+G K A+V+L+ FG PT+ VDTH
Sbjct: 105 RALAAIREETGGAYSLAFLDAMPTDEAKGWLTDIKGVGPKTASVVLNFHFGKPTMAVDTH 164
Query: 160 IFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCII 218
+ R+S R GL NK L IIP + Y H L+ HGR C AR P C
Sbjct: 165 VERVSKRFGLVTESATNKRAHDELDAIIPDELTYPLHVLLITHGREFCSARSPDCA---- 220
Query: 219 SNLCKRI 225
+ +C+R
Sbjct: 221 NPVCERY 227
>gi|121997381|ref|YP_001002168.1| HhH-GPD family protein [Halorhodospira halophila SL1]
gi|121588786|gb|ABM61366.1| HhH-GPD family protein [Halorhodospira halophila SL1]
Length = 234
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 23/230 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
+S+ + G T + L + + F ++V +L+ +
Sbjct: 1 MSTTAPRPHPG-------LTEERLAWLLERLVAHHGE-QHWWPAETAFEVLVGAILTQNT 52
Query: 62 TDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH------I 114
+V +A + L P ++ +++ IR G + K+ + +L
Sbjct: 53 AWSHVERAMEQLRVAGLLDPVALIEADPEEVATAIRPAGYFNVKTRRLRNLCITYLQEGC 112
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+ + E L + G+GR+ A+ IL AF P VD + RI R+G G
Sbjct: 113 MEGMQLQRTEALREKLLAVNGVGRETADDILLYAFHRPVFVVDAYTRRILQRLGWIQGDE 172
Query: 175 PNK-----VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ VE +L H +V G+ C+ P+C C ++
Sbjct: 173 GYERLRGGVEAALGPNT--AAFNELHAQIVALGKDTCRP-TPRCPDCPLN 219
>gi|253745075|gb|EET01183.1| Endonuclease III [Giardia intestinalis ATCC 50581]
Length = 321
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
L T + +L G ++L I +G R+K+E + +++ + I+ + IP L G+
Sbjct: 120 MKLDTWRLTAKNVLDSGVEELGRIIYPVGFSRRKAEYMKNVAQVCIDSYGGDIPGDLAGI 179
Query: 131 TRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKT---------PNKVEQ 180
+LPG G K ++++ + +G I VDTH+ RI+ R+ P+ V +
Sbjct: 180 LKLPGFGPKMGHLLVQIVYGQVEGIAVDTHVCRITQRLRWVEKGMCEPDGKVLNPDDVAK 239
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKRIK 226
L+ +P + ++ LV G+ VCKA P+C C+I+ C K
Sbjct: 240 QLVETLPKDKWGDINHLLVGFGQTVCKASFPECSRCLIAGTGHC-YYK 286
>gi|258592802|emb|CBE69111.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 228
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 19/208 (9%)
Query: 30 YLFSLKWPS------PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQK 82
+ + P+ + F +IV +L+ + +NV KA L P+
Sbjct: 8 RRLLSLYRNLFRYFGPQRWWPARSRFEVIVGAILTQNTAWINVEKAITALRTARLLNPRG 67
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHI--------LINEFDNKIPQTLEGLTRLP 134
+ ++ ++ L IR G Y K+E + ++ + + + E L +
Sbjct: 68 IDSVPQEHLATLIRPSGYYNMKTERLKHVTRFLLTRYGGSVRRMGRTGLSELREELLGIS 127
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
G+G + A+ IL A P VD + R+ +A ++++ + +P
Sbjct: 128 GVGEETADSILLYAGDRPIFVVDAYTRRVLERHGLIAKNTRYGEIQRLFMTHLPTDATLF 187
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIIS 219
H LV G+ C+ R P C C +
Sbjct: 188 NEYHALLVAVGKTYCR-RTPNCDKCPLR 214
>gi|297728949|ref|NP_001176838.1| Os12g0212266 [Oryza sativa Japonica Group]
gi|255670145|dbj|BAH95566.1| Os12g0212266 [Oryza sativa Japonica Group]
Length = 962
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++Q ++ P + + ++ G +C+ KP C C +SN C+ +
Sbjct: 726 RIKQLTGELVDPSRPGDFNQAIMELGATLCRKTKPGCSQCPVSNHCQAL 774
>gi|257075427|ref|ZP_05569788.1| T/G-specific DNA glycosylase [Ferroplasma acidarmanus fer1]
Length = 223
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 85/208 (40%), Gaps = 5/208 (2%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ I + K + + + +++A ++ ++ VN+ +
Sbjct: 15 RIRNIILAWGEKNMRNFPWRHTGDPYKILIAEIMLHRTRAEQVNRIYDSFIMKYPDIYAI 74
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ G L+N ++++G+ + + + L+ +I ++D IP + L LPGIG A+
Sbjct: 75 VDAGPHALKNDLKSLGL-SYRGDMLYRLAAQIIEKYDGNIPDNINDLASLPGIGDYAASA 133
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPG----KTPNKVEQSLLRIIPPKHQYNAHYWLV 199
++ A+ P +DT+ RI +R+ + + + + II + ++
Sbjct: 134 VMCSAYKSPAPFLDTNTVRIISRVYGIKPTDSSRRSKEFKMIMNSIIDSSDTRKLMFSML 193
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VC P+C C ++ C K+
Sbjct: 194 DFAAIVCTHHTPECSVCGLNRDCIFHKE 221
>gi|303245100|ref|ZP_07331418.1| HhH-GPD family protein [Methanothermococcus okinawensis IH1]
gi|302484543|gb|EFL47489.1| HhH-GPD family protein [Methanothermococcus okinawensis IH1]
Length = 217
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLA 85
+I+ + + + +++ +++ + NV KA +L +++L
Sbjct: 2 KIYNKLLSHFG-IQYWWPAETKYEVVIGAIITQNISWKNVEKALNNLKNEDLIDEKRILK 60
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD---------NKIPQTLEGLTRLPGI 136
I +KL+ I+ G Y K+E + +++ +++ + L + G+
Sbjct: 61 INTEKLKELIKPAGFYNIKAERLKNITKYIVDNYKTTDELAKTEKDTNILRNELLNIKGV 120
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKH--QYN 193
G++ A+ IL A VD + RI +R G+ +++ I P
Sbjct: 121 GKETADSILLYALDRKIFVVDAYTRRIFSRYGIINKDMDYDEIRLIFEDNIIPSLNIYKE 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H +V G+ CK + P C +C ++ C+++
Sbjct: 181 YHALIVELGKNYCKKKNPLCNTCPLNLYCRKL 212
>gi|41223388|tpe|CAD59973.1| TPA: putative endonuclease III homologue [Trypanosoma brucei]
Length = 151
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKT--P 175
+P++ EGL LPG+G K A++ L A + VDTH+ RI+ R P P
Sbjct: 11 HKGTVPRSYEGLVSLPGVGPKMAHLFLQEADSVVIGIGVDTHVHRIAQRFHWVPSTVKSP 70
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
++L +P K+ + LV G+ +C R P+C C S LC ++
Sbjct: 71 EDTRKALEAWLPAKYWGEINGMLVGLGQTICTPRIPRCSECPASGLCPSAFRE 123
>gi|256811111|ref|YP_003128480.1| HhH-GPD family protein [Methanocaldococcus fervens AG86]
gi|256794311|gb|ACV24980.1| HhH-GPD family protein [Methanocaldococcus fervens AG86]
Length = 211
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQK 82
EL +I+ + + + + ++V +L+ ++ NV KA +L +K
Sbjct: 4 ELLKIYKVLLDFYGH-QNWWPAETRYEVVVGAILTQNTSWKNVEKAINNLKNENLLEEEK 62
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRL 133
+L I E KL+ I+ G Y K++ + + + +++ + + + L +
Sbjct: 63 ILNIDEDKLKELIKPAGFYNLKAKRLKNTTKFIVDNYGSTEGMAKTDKDTLTLRKELLSI 122
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH-- 190
G+G++ A+ IL A + VD + R+ +R+G+ K +++++ + +P
Sbjct: 123 NGVGKETADSILLYALDRESFVVDAYTKRMFSRLGIINEKAKYDEIKEIFEKSLPKDLEI 182
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISN 220
H +V H + C+ +KP C+ C IS+
Sbjct: 183 YKEYHALIVEHCKKFCR-KKPLCEKCPISH 211
>gi|218530896|ref|YP_002421712.1| endonuclease III FCL domain protein [Methylobacterium
chloromethanicum CM4]
gi|218523199|gb|ACK83784.1| Endonuclease III FCL domain protein [Methylobacterium
chloromethanicum CM4]
Length = 254
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI + P + ++ + +++ LLS ++ + + +A K L
Sbjct: 29 KHKALEIHRRLCGVYECPIPYFHSLDPLSELISSLLSHRTRNADSGRAFKALRARWPDWT 88
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTR 132
++ A K+++ I + K+ I ++ + D + + L
Sbjct: 89 EIDAASVKEIEATIHGVTWPELKAPRIKAVLAAVQERVGALSLDFLGDMSVDEARGWLEA 148
Query: 133 LPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PGIG K + +LS + + VD+H R++ R GL K ++LR P
Sbjct: 149 IPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGAKVDVGPSHAVLRAQLPDDW 208
Query: 192 Y-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ H L+LHG+ VC R P C C++ ++C
Sbjct: 209 SAQKLYDNHEVLMLHGQRVCFHRSPACGRCVLLDICP 245
>gi|242279095|ref|YP_002991224.1| HhH-GPD family protein [Desulfovibrio salexigens DSM 2638]
gi|242121989|gb|ACS79685.1| HhH-GPD family protein [Desulfovibrio salexigens DSM 2638]
Length = 217
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 13/215 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
+ + L E + S + P + F + V +L + NV KA K+L E
Sbjct: 1 MSREQTLIEYYKALSERLG-PCHWWPGESPFEIAVGAILVQNTNWANVEKAIKNLKENDG 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK--------IPQTLEG 129
TPQ + ++LQ I+ G +R K+ + + L + E
Sbjct: 60 LTPQGLRKFSIEELQELIKPSGFFRMKAIRLNNFLDFLDVNSAKCITDLEDAETFELREK 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPP 188
L + GIG + A+ IL A P VD + RI NR L ++++ + ++ P
Sbjct: 120 LLAVNGIGPETADSILLYALNKPVFVVDAYTRRIFNRHMLVHEDIDYHELQDYFMDVLDP 179
Query: 189 --KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ H +V + CK KP C++C +
Sbjct: 180 DVEMYNEYHALIVRTAKEWCKKSKPDCENCPLGKF 214
>gi|167389834|ref|XP_001739104.1| endonuclease III [Entamoeba dispar SAW760]
gi|165897321|gb|EDR24512.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 306
Score = 69.6 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 83/239 (34%), Gaps = 25/239 (10%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWPSPKG----ELYYVN-------------HFTLIV 53
+ +Y+ E+ E + + +L + F ++
Sbjct: 2 KRKDKEEIIYSEDEVNERLAILEEIKKKVETFDEKKLQFGTNLITELSPDEQSKPFYALI 61
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--LQNYIRTIGIYRKKSENIISL 111
LLS ++ + K +L E + + L + +K + I+
Sbjct: 62 GALLSTKTCETLRLKVMNNLIEHYKKLTPEIMSKTSEDILNELLDGCYGKVRKIKFILEC 121
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG---VDTHIFRISNRIG 168
S ++ N +++ +P ++ L +LPGIG K A +I ++ F + +
Sbjct: 122 SKVIHNSYNDIVPDDIDELKKLPGIGPKLAKIICAIGFKKIEGITVDQRSLLLLSRLEWI 181
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL--CKRI 225
L N + + +P +H +L +Y+CK P C C ++ CK
Sbjct: 182 LKDISNDNDAMKEVEEWLPKEHWSYFSKATILFAKYICKP-NPLCDECPLAKHYVCKYY 239
>gi|323335667|gb|EGA76950.1| Ntg2p [Saccharomyces cerevisiae Vin13]
Length = 292
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
++ +LSAQ+ D + +A ++ E K+ L N IR +
Sbjct: 62 QFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSF 121
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTH 159
Y +K+ I + +L++ FD+ IP +EG+ LPG+G K + L +G I I VD H
Sbjct: 122 YTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVGICVDVH 181
Query: 160 IFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R+ E + L +P Y + LV G+ +C AR +C C
Sbjct: 182 VHRLCKMWNWVDPIKCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLC 241
Query: 217 IISNLCKRIKQ 227
+ +++C +
Sbjct: 242 LANDVCNARNE 252
>gi|295099303|emb|CBK88392.1| Predicted EndoIII-related endonuclease [Eubacterium cylindroides
T2-87]
Length = 107
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
EI +P+ + EL + F L+VAV+LSAQ+TD +VNK T LF T + M
Sbjct: 3 ANEILDEMEKLYPNAECELKHETPFQLLVAVVLSAQTTDESVNKVTPALFAAYPTSKAMA 62
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+++YIR IG+YR K+ +I+ LS L +F
Sbjct: 63 QASLSDIESYIRRIGLYRNKARSILKLSQDLEEKFH 98
>gi|257053763|ref|YP_003131596.1| DNA-(apurinic or apyrimidinic site) lyase [Halorhabdus utahensis
DSM 12940]
gi|256692526|gb|ACV12863.1| DNA-(apurinic or apyrimidinic site) lyase [Halorhabdus utahensis
DSM 12940]
Length = 274
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 27/227 (11%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA------ 77
++ + + + F +V +LS ++DV A L +
Sbjct: 32 RAAKVVDRLGELY--WQKTYGGQDAFECLVRTILSQNTSDVASQPAHDALMDRYGSEDEE 89
Query: 78 --DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR--- 132
D + + +L I G+Y +KS II ++ + E+ +
Sbjct: 90 EVDLVDALADAEQAELAETISGAGLYNQKSARIIEIAQRIREEYGGEDDFDAFVREEPAE 149
Query: 133 --------LPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAP-GKTPNKVEQSL 182
+ G+G K A+ +L A G VDTH+ RI R+G+AP G V + L
Sbjct: 150 AVRETLLAMNGVGPKTADCVLLFAGGRDGVFPVDTHVHRIYRRLGIAPPGADHEAVREVL 209
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQC----QSCIISNLCKRI 225
+ +P H + GR C AR+P C ++C + +LC R+
Sbjct: 210 EKKVPEGKCGFGHTASIQFGREYCSAREPACLDGPEACPLYDLCDRV 256
>gi|222054193|ref|YP_002536555.1| HhH-GPD family protein [Geobacter sp. FRC-32]
gi|221563482|gb|ACM19454.1| HhH-GPD family protein [Geobacter sp. FRC-32]
Length = 223
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 78/214 (36%), Gaps = 14/214 (6%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADT 79
+EL +F + F + V +L+ + NV KA +L + +
Sbjct: 9 RRQELLWVFNSLFEHYGKLH-WWPAETPFEVCVGAILTQNTNWGNVEKAIANLKKADLLS 67
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN--------EFDNKIPQTLEGLT 131
+ + ++L I+ G + KS + L F + E L
Sbjct: 68 AITLRDVPVEELAQVIKPAGFFNVKSARLKDFVGWLFERYLGRLESMFAGDWLELREELL 127
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPK- 189
++ GIGR+ + IL A P+ VD + R+ +GL V + +P
Sbjct: 128 KVRGIGRETCDSILLYAGNKPSFVVDAYTKRLFTHLGLVSAKDDYEAVRALFMDNLPADA 187
Query: 190 -HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C+ +KP C C + + C
Sbjct: 188 ALFNEFHALIVQHCKVHCR-KKPLCSGCRLHSSC 220
>gi|332535312|ref|ZP_08411112.1| endonuclease III [Pseudoalteromonas haloplanktis ANT/505]
gi|332035259|gb|EGI71765.1| endonuclease III [Pseudoalteromonas haloplanktis ANT/505]
Length = 59
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GK VEQ L +++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 1 MGKDVVAVEQKLEKVVPKEFKVDVHHWLILHGRYTCVARKPKCGSCIIEDLCEFKEK 57
>gi|239995441|ref|ZP_04715965.1| Endonuclease III/Nth [Alteromonas macleodii ATCC 27126]
Length = 115
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
P +G K A V++S FGIP VDTHI R+ R GL+ GK+ + E+ R+ P + +
Sbjct: 1 PAVGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPKERWND 60
Query: 194 AHYWLVLHGRYVCKARKPQCQSCII 218
H ++L+GR C AR C+I
Sbjct: 61 LHLQIILYGREYCPARGFDLNKCVI 85
>gi|315127003|ref|YP_004069006.1| endonuclease III [Pseudoalteromonas sp. SM9913]
gi|315015517|gb|ADT68855.1| endonuclease III [Pseudoalteromonas sp. SM9913]
Length = 59
Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
GK +VE+ L +++P + + + H+WL+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 1 MGKNVVEVEKKLEKVVPKEFKVDVHHWLILHGRYTCVARKPKCGSCIIEDLCEFKDK 57
>gi|15807425|ref|NP_296158.1| endonuclease III [Deinococcus radiodurans R1]
gi|6460251|gb|AAF11977.1|AE002073_7 endonuclease III [Deinococcus radiodurans R1]
Length = 259
Score = 69.2 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 13/209 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ ++ + + +++ +LS ++T + A + L + D +
Sbjct: 30 VKERLHEEYGD-QDPTPRRDPMHELISTILSQRTTHADEEAAYQELRTLGD-WDAITLAP 87
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE---------GLTRLPGIGR 138
+ + IR K+ I + L LT LPG+G
Sbjct: 88 TDAVAHAIRRSNYPESKAPRIQETLRRIKAAPGGYDLDFLRDLPVKDALKWLTDLPGVGV 147
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHY 196
K A+++L + P VDTH+ R+S R+G+ G+ L P + Y H
Sbjct: 148 KTASLVLLFNYARPVFPVDTHVHRVSTRVGVIPRMGEQAAHRALLALLPPDPPYLYELHI 207
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ HGR VC +P+C CI+ C
Sbjct: 208 NFLSHGRQVCTWTRPKCGKCILRERCDAY 236
>gi|323478064|gb|ADX83302.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfolobus islandicus
HVE10/4]
Length = 233
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQK 82
+L I+ + + + L N F ++VA +LS STD + KA L + TP+K
Sbjct: 11 KLSAIYTIKEEDYIAYYVWLKTRNCFKVLVATILSQNSTDKSALKAYLELEKKVGVTPEK 70
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT------LEGLTRLPGI 136
+ ++N ++ G+Y+ K++ + +S I++ +++ I E L + GI
Sbjct: 71 LSDADLSDIENALKISGLYKTKAKRLKIISKIILEKYNGLIDNLLNSSNPREELLKFEGI 130
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAH 195
G K A+V+L G +DTHI R+S R+G+ P + + +L + H
Sbjct: 131 GEKTADVVLLTCRGYEVFPIDTHITRVSKRLGIVPMNAKYELISSTLKELFSAYDLLQLH 190
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L+ HGR CKARKP C SCII C+
Sbjct: 191 LLLIAHGRQTCKARKPLCNSCIIKECCEYY 220
>gi|222479474|ref|YP_002565711.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
gi|222452376|gb|ACM56641.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
Length = 233
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV-NH-------FTLIVAVLLSAQSTDVNVNKATK 71
+T + ++ + + + +V +LS D N ++AT
Sbjct: 6 WTESRVRDLHDDLVSLYEPVDRVAEHGADPTAEPGEGVRQLVTTILSQNVADANTSRATT 65
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL----------SHILINEFDN 121
LF+ D + A ++L+ IR G+ +K+ I ++ L
Sbjct: 66 ALFDRYDDFAAIEAADHEELKETIRVAGLADQKAARIQRALAAIREETGGAYSLAFLDAM 125
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
E L + G+G K A+V+L+ FG PT+ VDTH+ R+S R GL P N+
Sbjct: 126 ATDDAKEWLMEIKGVGPKTASVVLNFHFGKPTMAVDTHVERVSKRFGLVPESASNQAAHD 185
Query: 182 LL-RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L +++P + Y H L+ HGR C AR C + +C+R
Sbjct: 186 ALDKLVPDELIYPLHVLLIRHGRERCSARGADCD----NPVCERY 226
>gi|110597450|ref|ZP_01385737.1| Helix-hairpin-helix motif:HhH-GPD [Chlorobium ferrooxidans DSM
13031]
gi|110340994|gb|EAT59465.1| Helix-hairpin-helix motif:HhH-GPD [Chlorobium ferrooxidans DSM
13031]
Length = 272
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 75/197 (38%), Gaps = 5/197 (2%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ +++E + + + + + + ++V+ ++ Q+ V + +
Sbjct: 2 IVLHQQQIEGFREKIFDFYRTNRRSFPWRETTDRYAVMVSEIMLQQTQADRVAEKFRVWM 61
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E + + + + +G + + + +++ FD +P T + L LP
Sbjct: 62 ERFPDTETLALSSLRDVLALWSGLGYNSRGQR-LQLSARLIMERFDGIVPSTPDQLKSLP 120
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
GIG + I A + VDT+I RI + L ++ + +++P
Sbjct: 121 GIGEYTSRSIPVFADNLDVAAVDTNIRRIIMHEFTLPEDTRKAAIQVAAEQLLPHGRSRE 180
Query: 194 AHYWLVLHGRYVCKARK 210
H L+ +G +R+
Sbjct: 181 WHNALMDYGSLALTSRR 197
>gi|193212760|ref|YP_001998713.1| HhH-GPD family protein [Chlorobaculum parvum NCIB 8327]
gi|193086237|gb|ACF11513.1| HhH-GPD family protein [Chlorobaculum parvum NCIB 8327]
Length = 277
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 69/183 (37%), Gaps = 5/183 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + + + + + ++V+ ++ Q+ V + E Q
Sbjct: 6 VESFQSKILEFYQQNRRSFPWRMTTDRYAIMVSEVMLQQTQADRVARRFPLWLERFPDVQ 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ + +G + + + ++ +FD +P L LPGIG +
Sbjct: 66 TLASASLREVLDAWSGLGYNSRGQRLHRAAAMVV-EQFDGCVPSDPARLIELPGIGAYTS 124
Query: 142 NVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
I A + VDT+I R+ + + L TP + ++P + H L+
Sbjct: 125 RSIPVFADNLDLAAVDTNIRRVLIHELNLPESITPKALLAVAEEVLPKGRSRDWHNALMD 184
Query: 201 HGR 203
+G
Sbjct: 185 YGA 187
>gi|170288346|ref|YP_001738584.1| HhH-GPD family protein [Thermotoga sp. RQ2]
gi|170175849|gb|ACB08901.1| HhH-GPD family protein [Thermotoga sp. RQ2]
Length = 220
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 14/216 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI---ADTP 80
L E++ S +++ +L+ + NV + +++ +
Sbjct: 2 RLTELYRKLLEIHGSVGKWWP-GTPEEIVITAILTQNTNWKNVERVMENIKNAVKGNNLL 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTLEGLTRL 133
+++ ++ E+K+ I+ G + K++ + +L L N E L ++
Sbjct: 61 KELDSLPEEKVAELIKPAGFFNIKTKRLKALLKFLKEYNYNLSRLRDLPTHILRERLLKI 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
GIG++ A+ IL A P VD++ R+ RI ++V++ + P
Sbjct: 121 KGIGKETADAILLYALEKPIFVVDSYTRRLLKRIFNIELNDYDEVQKLFMTHYPEDVRLY 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + C + P+C C + C + Q
Sbjct: 181 QEFHGLIVEHAKKFCN-KTPKCGVCPLRKECYHVSQ 215
>gi|198283588|ref|YP_002219909.1| HhH-GPD family protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665212|ref|YP_002426212.1| base excision repair protein, HhH-GPD family [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248109|gb|ACH83702.1| HhH-GPD family protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517425|gb|ACK78011.1| base excision repair protein, HhH-GPD family [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 223
Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
+F + + P+ + F ++V +L+ + NV KA +L + + + +LA+
Sbjct: 10 VFGMLEEAFG-PQDWWPAQSPFEVMVGAILTQNTAWRNVEKAIANLRAVDALSVRALLAL 68
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINE----------FDNKIPQTLEGLTRLPGI 136
E L +R G YR K+ +++L L IP + L + GI
Sbjct: 69 PEGDLAELLRPSGFYRIKTRRLLALCRFLEARGVGAAPEQLARQANIPTLRKDLLAVHGI 128
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH---QY 192
G + A+ IL A G+P + VD + RI +R+GL + +V+ + + P +
Sbjct: 129 GAETADSILLYALGLPVMVVDAYTRRIGSRLGLLEDDLSYGEVQAGMEAELQPGDVQTRN 188
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H LV G+ C+ R P+C C + C
Sbjct: 189 ALHALLVSLGKDYCRPR-PRCGLCPLHACCAY 219
>gi|328860800|gb|EGG09905.1| hypothetical protein MELLADRAFT_26899 [Melampsora larici-populina
98AG31]
Length = 228
Score = 68.8 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADT---PQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+V+++LS+Q+ D ++A +L + +++N I +G +R+K+ +
Sbjct: 52 LVSLMLSSQTKDQITHQAVLNLKRNLSNGLSVNSLRNSSLLQIENCINKVGFWRRKASYL 111
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNR- 166
++ L + + +P+TL +G K A + L+ A+ I VDTH+ RI+NR
Sbjct: 112 KEMAEDLYSFHQSDVPKTLGK-----RVGPKMAFLALASAWSINEGIGVDTHVHRITNRL 166
Query: 167 -IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI---ISNLC 222
L P P + +L +P ++ LV G+ +C P+C++C I LC
Sbjct: 167 GWHLPPTTEPEQTRLNLQSWLPKNLHQEINHLLVGFGQLICLPIGPKCETCFVGQIEGLC 226
Query: 223 KR 224
Sbjct: 227 PS 228
>gi|320534536|ref|ZP_08034992.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133248|gb|EFW25740.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 91
Score = 68.4 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K ANV+L AFG P I VDTH+ R+S R+G K P +VE+ + + P + + L
Sbjct: 1 KTANVVLGNAFGQPAITVDTHVGRLSRRLGWTTSKDPLRVEKDIAALWEPWRWTDGCHRL 60
Query: 199 VLHGRYVCKARKPQCQSCII--SNLCK 223
+ HGR VC AR P+C C + + LC
Sbjct: 61 IEHGRQVCSARSPRCGECALLEAGLCP 87
>gi|291279215|ref|YP_003496050.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290753917|dbj|BAI80294.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 213
Score = 68.4 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 88/212 (41%), Gaps = 13/212 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-ADTPQKM 83
L ++ + + F + + +L+ + NV KA ++ +P+++
Sbjct: 2 LNRLYNILFANYGD-LNWWPAETPFEVCIGAILTQNTNWKNVEKAINNMKIKGVLSPKEI 60
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE--------FDNKIPQTLEGLTRLPG 135
L L++ I+ G Y +K+E + + ++N+ I + + L L G
Sbjct: 61 LNTDLNVLKDLIKPAGFYNQKAERLQIFCNFIMNQLNGDILNLKKYSIHEARDKLLSLKG 120
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYN 193
+G++ A+ IL A VD + R+ R G+ +K + + + + N
Sbjct: 121 VGKETADSILLYALDFKIFVVDAYTMRLFRRYGIGYFDNYDKCQDFVHKDFHGELYDYKN 180
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H +V + CK +KP C C++ CK++
Sbjct: 181 FHACIVEICKTYCK-KKPLCNICLLKKYCKKV 211
>gi|307594552|ref|YP_003900869.1| HhH-GPD family protein [Vulcanisaeta distributa DSM 14429]
gi|307549753|gb|ADN49818.1| HhH-GPD family protein [Vulcanisaeta distributa DSM 14429]
Length = 230
Score = 68.4 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 77/225 (34%), Gaps = 25/225 (11%)
Query: 25 LEEIFYLFSLKWPSPKGELYY-----------------VNHFTLIVAVLLSAQSTDVNVN 67
+ E + K EL +I+ +L Q+ V+
Sbjct: 1 MNETVNRLIETFRGIKSELESVGWYPVDAESTRWWGGAETPDEVIITAILVQQTRWDVVH 60
Query: 68 KATKHL-----FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ L I + ++ ++ + +++ I E
Sbjct: 61 EVLNRLRKLGLNTIESIANADPNYLAEVIKGVNYRFTKAQRLVKLARNITVIGGLERLRL 120
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI-GLAPGKTPNKVEQS 181
+ L G+GR+ A+ I+ A I T+ + + R+ +R+ G+ PG + +++
Sbjct: 121 KGDVRDFLLNQEGVGRETADSIMLFALNILTLPISQYTKRVFSRVLGINPGNDYDSWKRT 180
Query: 182 LLRIIPPKHQ-YNAHYW-LVLHGRYVCKARKPQCQSCIISNLCKR 224
L +IP Y + ++ G+ C P C C + +LC
Sbjct: 181 LEDLIPRDLYTYKLVHASVITIGKKYCLPDNPLCDKCPLRDLCLY 225
>gi|21226379|ref|NP_632301.1| T/G-specific DNA glycosylase [Methanosarcina mazei Go1]
gi|20904634|gb|AAM29973.1| T/G-specific DNA glycosylase [Methanosarcina mazei Go1]
Length = 224
Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
+++ I + + + + + + VA ++ ++ V +
Sbjct: 13 KIKIIRTELLIWGEENLRKFPWRETSDPYKIAVAEVMLHRTKADQVKNIYEQFILKYPDF 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ ++ G + ++ ++++G++ +++ + ++ ++ ++ ++P + L +PG+G
Sbjct: 73 ESIVKAGREAIKADLKSLGLF-WRADLLYDMAVEVMEKYGGELPLDRKKLMTMPGVGNYI 131
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ----SLLRIIPPKHQYNAHY 196
+ IL + P +DT+ R+ RI ++ + + ++ +
Sbjct: 132 SAAILCFGYNFPEPVLDTNTVRVLGRIFGLKITDSSRRSKLFYGIMHDLVNFWDPRTVSF 191
Query: 197 WLVLHGRYVCKAR-KPQCQSCIISNLCKRIKQ 227
L+ VC KP+C+ C + ++C +
Sbjct: 192 ALIDFANVVCIPSDKPRCEICSLRDICIYYSK 223
>gi|190407301|gb|EDV10568.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae RM11-1a]
gi|207341351|gb|EDZ69433.1| YOL043Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273941|gb|EEU08860.1| Ntg2p [Saccharomyces cerevisiae JAY291]
gi|259149442|emb|CAY86246.1| Ntg2p [Saccharomyces cerevisiae EC1118]
gi|323346595|gb|EGA80881.1| Ntg2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352347|gb|EGA84882.1| Ntg2p [Saccharomyces cerevisiae VL3]
Length = 380
Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
++ +LSAQ+ D + +A ++ E K+ L N IR +
Sbjct: 150 QFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSF 209
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTH 159
Y +K+ I + +L++ FD+ IP +EG+ LPG+G K + L +G I I VD H
Sbjct: 210 YTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVGICVDVH 269
Query: 160 IFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R+ E + L +P Y + LV G+ +C AR +C C
Sbjct: 270 VHRLCKMWNWVDPIKCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLC 329
Query: 217 IISNLCKRIKQ 227
+ +++C +
Sbjct: 330 LANDVCNARNE 340
>gi|146295729|ref|YP_001179500.1| HhH-GPD family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145409305|gb|ABP66309.1| DNA-3-methyladenine glycosylase III [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 224
Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L EIF W P+ F ++V +L+ ++ +V KA +L + +
Sbjct: 7 QKLYEIFQRLYEFWG-PQNWWPAETKFEMVVGAILTQNTSWSSVEKAISNLKKANILSIE 65
Query: 83 MLAIGEKKL-QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRL 133
+ ++ IR G Y +K++ + L NEF++ + + E L
Sbjct: 66 GILQTPDEILAQLIRPTGYYNQKAKRLKDFCSFLKNEFNSDLQKLFSLEISELREKLLSQ 125
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQ 191
GIG + A+ I+ P VD + R+ R+GL + N+++ +++ + K
Sbjct: 126 KGIGYETADSIILYGAEKPIFVVDAYTKRLFFRLGLIESEKIDYNQLQSTIMENLEHKTS 185
Query: 192 --YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V H + +CK +KP+C+ C + +C+
Sbjct: 186 LFNEFHALIVKHCKEICKNKKPECKKCCLHKMCEA 220
>gi|6324530|ref|NP_014599.1| Ntg2p [Saccharomyces cerevisiae S288c]
gi|14285602|sp|Q08214|NTG2_YEAST RecName: Full=DNA base excision repair N-glycosylase 2
gi|1419843|emb|CAA99045.1| endonuclease III-like glycosylase 2 [Saccharomyces cerevisiae]
gi|151945590|gb|EDN63831.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae YJM789]
gi|285814846|tpg|DAA10739.1| TPA: Ntg2p [Saccharomyces cerevisiae S288c]
gi|323303033|gb|EGA56836.1| Ntg2p [Saccharomyces cerevisiae FostersB]
Length = 380
Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
++ +LSAQ+ D + +A ++ E K+ L N IR +
Sbjct: 150 QFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSF 209
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTH 159
Y +K+ I + +L++ FD+ IP +EG+ LPG+G K + L +G I I VD H
Sbjct: 210 YTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIAGICVDVH 269
Query: 160 IFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R+ E + L +P Y + LV G+ +C AR +C C
Sbjct: 270 VHRLCKMWNWVDPIKCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLC 329
Query: 217 IISNLCKRIKQ 227
+ +++C +
Sbjct: 330 LANDVCNARNE 340
>gi|15643148|ref|NP_228192.1| repair endonuclease, putative [Thermotoga maritima MSB8]
gi|4980885|gb|AAD35467.1|AE001718_4 repair endonuclease, putative [Thermotoga maritima MSB8]
Length = 232
Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 14/211 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI---ADTP 80
L E++ S +++ +L+ + NV +A +++ +
Sbjct: 14 RLTELYRKLLEIHGSVGKWWP-GTPEEIVITAVLTQNTNWKNVERAMENIKNEVKGNNLL 72
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTLEGLTRL 133
+++ ++ E+K+ IR G + K++ + L L N E L ++
Sbjct: 73 KELDSLPEEKVAELIRPAGFFNIKTKRLKELLKFLKEYNYNLSRLRDLPTHILRERLLKI 132
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
GIG++ A+ IL A P VD++ R+ RI ++V++ + P
Sbjct: 133 KGIGKETADAILLYALEKPVFVVDSYTRRLLKRIFNIELNDYDEVQKLFMTHYPEDVRLY 192
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C ++ P+C C + C
Sbjct: 193 QEFHGLIVEHAKKFC-SKTPKCGVCPLKKEC 222
>gi|118581886|ref|YP_903136.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
gi|118504596|gb|ABL01079.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
Length = 299
Score = 68.0 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 5/205 (2%)
Query: 1 MVSSKK-SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
M+S ++ ++ Y L I+ F P P + + ++V+ ++
Sbjct: 1 MLSPQRLTEQYHAAGELDAATVTAFRRAIYRHFHA-NPRPMPWRETSDPYHILVSEVMLQ 59
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ V E T + + ++L + +G R+ + + +
Sbjct: 60 QTQVERVKAKYAQFLETFPTVRHLATAPLEELLRLWQGLGYNRRAIA-LKRCAEQIHILH 118
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNK 177
+ P T+ L LPGIG A + + AFG+P ++T+I + G + +
Sbjct: 119 EGNFPTTIHELQNLPGIGPYTARAVAAFAFGLPEPFIETNIRTVFIHFFFHKQEGISDRQ 178
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHG 202
+ + + + +Y L+ +G
Sbjct: 179 LMPLVGATLDHSDPRHWYYALMDYG 203
>gi|148269671|ref|YP_001244131.1| HhH-GPD family protein [Thermotoga petrophila RKU-1]
gi|281411619|ref|YP_003345698.1| HhH-GPD family protein [Thermotoga naphthophila RKU-10]
gi|147735215|gb|ABQ46555.1| DNA-3-methyladenine glycosylase III [Thermotoga petrophila RKU-1]
gi|281372722|gb|ADA66284.1| HhH-GPD family protein [Thermotoga naphthophila RKU-10]
Length = 220
Score = 68.0 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 14/211 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE---IADTP 80
L E++ S + + +L+ + NV + +++ +
Sbjct: 2 RLTELYRKLLEIHGSVGKWWP-GTPEEIAITAILTQNTNWKNVERVMENIKNAVKGNNLL 60
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTLEGLTRL 133
+++ ++ E+K+ IR G + K++ + +L L N E L ++
Sbjct: 61 KELDSLPEEKVAELIRPAGFFNIKTKRLKALLKFLKEYNYNLSRLRDLPTHILRERLLKI 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
GIG++ A+ IL A P VD++ R+ RI ++V++ + P
Sbjct: 121 KGIGKETADAILLYALEKPIFVVDSYTRRLLKRIFNIELNDYDEVQRLFMTHYPEDVRLY 180
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C ++ P+C C + C
Sbjct: 181 QEFHGLIVEHAKKFC-SKTPKCGVCPLKKEC 210
>gi|94986389|ref|YP_605753.1| HhH-GPD [Deinococcus geothermalis DSM 11300]
gi|94556670|gb|ABF46584.1| HhH-GPD [Deinococcus geothermalis DSM 11300]
Length = 242
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
++ + + +P L IF ++ K L +++ +LS ++
Sbjct: 1 MNETPALNVARPAPERAAL----LRWIFARLRAEYGE-KQLLPRREAMHELISTILSQRT 55
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN 121
T + A + L ++ D ++A + + + IR K+ I + + +E +
Sbjct: 56 TQQDEELAYQALRQLGD-WDAIIAAPTEAVAHAIRRSNYPESKAPRIQATLRAIRDERGS 114
Query: 122 KIPQTL---------EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
L + LT LPG+G K A+++L + P VDTH+ R++ R+G+
Sbjct: 115 YDLDFLAELPVKDALKWLTALPGVGIKTASLVLLFNYARPVFPVDTHVHRVTTRVGVIGR 174
Query: 173 KTPNKVEQSLLRIIPPKHQY--NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++LL+++PP + H L+ HG+ VC +P+C C++ C
Sbjct: 175 MGEQAAHRALLQLLPPDPPFLFELHLNLLRHGQKVCTWVRPKCPVCVLRARCDA 228
>gi|167391460|ref|XP_001739785.1| endonuclease III [Entamoeba dispar SAW760]
gi|165896410|gb|EDR23825.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 147
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
L N I+ +G Y K++ + I+ +F+N++PQT + L LPG+G K A++ILS+ F
Sbjct: 8 LINCIKGVGFYTTKAKRLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASLILSIGFD 67
Query: 151 I-PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
++ +DTHIF IS+R+G A G +P KV L +P + + +V G+ C+
Sbjct: 68 RLESLAIDTHIFVISHRLGWADGSSPEKVRLQLESWLPKEEWSLFNKSIVAFGQCCCRKI 127
Query: 210 KPQCQSCIISNLCKRIKQ 227
P+C+ C I + C +
Sbjct: 128 HPKCKQCPIQDKCHYYHK 145
>gi|219125923|ref|XP_002183219.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405494|gb|EEC45437.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 645
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 10/171 (5%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + V+ ++ Q+ V T + E + + +G YR ++
Sbjct: 190 TAYGVWVSEIMLQQTRVEAVVPYWVRWMIRFPTVHDLALADEDAVNAHWAGLGFYR-RAR 248
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ S + ++N+ + +P+ ++ L LPG+GR A+ I S+AF + VD ++ R+ R
Sbjct: 249 LLHSAAKYIVNDCNGALPENVQELLHLPGVGRYTASAIASIAFNVNVPVVDGNVCRVLAR 308
Query: 167 IGLAPGKTPNKVEQSLLRII---------PPKHQYNAHYWLVLHGRYVCKA 208
+ + + ++ G C
Sbjct: 309 LRGIANNIKAPALKDNHGWDLAAQIVSAGDGSAPGEVNQAIMELGATYCAP 359
>gi|270339627|ref|ZP_06005483.2| A/G-specific adenine glycosylase [Prevotella bergensis DSM 17361]
gi|270334338|gb|EFA45124.1| A/G-specific adenine glycosylase [Prevotella bergensis DSM 17361]
Length = 293
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 13/171 (7%)
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
K T + A E ++ + +G Y + + I+ K P T
Sbjct: 1 MDYWKRFMATYPTVDDLAAASEDEVLKLWQGLGYYSRARNLHKAARQIVA---MGKFPDT 57
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRI 185
+ +L G+G A I S AF P VD + R+ +R+ + + ++ +
Sbjct: 58 PADIKKLKGVGDYTAAAIASFAFSFPVPAVDGNCHRVLSRVYGIDTPINSTQGKKLFQAL 117
Query: 186 IPP---------KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + ++ G C + P C C + C+ ++Q
Sbjct: 118 AEQLMTEGRGNADRPEDFNAAMMDFGATQCTPKPPACIVCPFNEQCEALRQ 168
>gi|323307092|gb|EGA60375.1| Ntg2p [Saccharomyces cerevisiae FostersO]
Length = 380
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
++ +LSAQ+ D + +A ++ E K+ L N IR +
Sbjct: 150 QFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSF 209
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG-IPTIGVDTH 159
Y +K+ I + +L++ FD+ IP +EG+ LPG+G K + L +G I I VD H
Sbjct: 210 YTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIXGICVDVH 269
Query: 160 IFRISNRIGLAPGKTPNKVE---QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ R+ E + L +P Y + LV G+ +C AR +C C
Sbjct: 270 VHRLCKMXNWVDPIKCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLC 329
Query: 217 IISNLCKRIKQ 227
+ +++C +
Sbjct: 330 LANDVCNARNE 340
>gi|189500238|ref|YP_001959708.1| HhH-GPD family protein [Chlorobium phaeobacteroides BS1]
gi|189495679|gb|ACE04227.1| HhH-GPD family protein [Chlorobium phaeobacteroides BS1]
Length = 222
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 5/193 (2%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+++ + + K + + + ++++ ++ Q+ V E
Sbjct: 5 REKIACLQEKVFAFYRDNKRRFPWRETVDRYAVLISEVMLQQTQADRVVGKYLAWMERFP 64
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ K + +G + + + ++ E D +P + E L LPGIG
Sbjct: 65 DIPALAEASLKDVLASWSGLGYNARGQR-LHRCAMTILKEHDGVVPPSQEKLIELPGIGA 123
Query: 139 KGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
+ I A + VDT+I RI + +GL P ++ ++P H
Sbjct: 124 YTSRSIPIFADNLDIATVDTNIRRIYIHELGLPENIRPGELLSLAEEMLPEGRSREWHNA 183
Query: 198 LVLHGRYVCKARK 210
L+ +G RK
Sbjct: 184 LMDYGALYLTGRK 196
>gi|117924346|ref|YP_864963.1| DNA-3-methyladenine glycosylase III [Magnetococcus sp. MC-1]
gi|117608102|gb|ABK43557.1| DNA-3-methyladenine glycosylase III [Magnetococcus sp. MC-1]
Length = 229
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 13/211 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
++ + P+ +HF +++ LL ++ + A + L A L
Sbjct: 21 LYSHLLQHYG-PQHWWPAQSHFEMMLGALLVQNTSWSAAHGAVRALQLAALDSPAALRSA 79
Query: 88 EKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG-------LTRLPGIGRK 139
+ + I+ G +R+K++ + +L+ + D+ + L + GIG +
Sbjct: 80 PDESIHERIQGAGYFRQKTKKLKALAQFMGQYQDSPQRLFEQEGAALRATLLTVHGIGPE 139
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQ--YNAHY 196
A+ I G P VD + R+ R+G P + V+Q++ ++P H
Sbjct: 140 TADCICCYEAGQPWFVVDRYTQRLFQRLGWLDQPWPYETVQQAVHALLPHSAPVLGEFHA 199
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+V H + C A KPQCQ C +++ C + +
Sbjct: 200 LIVQHSKQHCSA-KPQCQGCPVTHYCAFVAR 229
>gi|149185054|ref|ZP_01863371.1| endonuclease III family protein [Erythrobacter sp. SD-21]
gi|148831165|gb|EDL49599.1| endonuclease III family protein [Erythrobacter sp. SD-21]
Length = 239
Score = 67.2 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 16/226 (7%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPSP-KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
PLG + L + L ++ + + ++V ++ A++ N AT L
Sbjct: 6 PLGPDPRTETLRRLQALLVQRFGRVERAAAEWRRPEWVLVQGVIGARTKSEVSNAATDRL 65
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH---------ILINEFDNKIP 124
+ + + + ++LQ + T +E + + L + + +
Sbjct: 66 LKRYGSWEGVAKAPLEELQAELATQTYPNIAAERLKASLTALIELRGLVDLSHLAEMETL 125
Query: 125 QTLEGLTRLPGIGRKGANVILS-MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
+ L +LPGIGRK A +++ P I +D H RI R+GL P K ++
Sbjct: 126 PAMRWLEQLPGIGRKIAAGVMNASTLDRPAIVLDGHHTRILQRMGLVPPKASTDRAFEVI 185
Query: 184 RIIPPKHQY----NAHYWLVL-HGRYVCKARKPQCQSCIISNLCKR 224
+ PK + + H+ L+ G+ C+ P C +C+ LCK
Sbjct: 186 MPVMPKEWHGADFDEHHLLMKKLGQTTCRPAAPDCAACLALPLCKS 231
>gi|332296597|ref|YP_004438520.1| HhH-GPD family protein [Thermodesulfobium narugense DSM 14796]
gi|332179700|gb|AEE15389.1| HhH-GPD family protein [Thermodesulfobium narugense DSM 14796]
Length = 221
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 16/214 (7%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
+ +L + + + + P+G + +IV + + ++ NV KA L +
Sbjct: 1 MTKEIDLLKNYEILYDTFG-PQGWWPADSPLEVIVGAVFTQNTSWKNVEKAIFKLKQENL 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP-------QTLEGL 130
T K++ I + KL +I+++G Y K++ + +L + F L
Sbjct: 60 LTLNKLVDIEQDKLAMFIKSVGYYNIKAKRLKNLISEIYRNFKKIEEVKKLDLIDARRFL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+ GIG + A+ IL A P +DT+ R R+ + ++
Sbjct: 120 LGINGIGYETADSILLYALEYPIFVIDTYTLRWLERLNIKFSGNKKEIYHKSQDFFMKNL 179
Query: 191 QY------NAHYWLVLHGRYVCKARKPQCQSCII 218
H +V G+ CK +KP C+ C
Sbjct: 180 PNETELFKEYHALIVKLGKEFCK-KKPDCKECPF 212
>gi|188582085|ref|YP_001925530.1| HhH-GPD family protein [Methylobacterium populi BJ001]
gi|179345583|gb|ACB80995.1| HhH-GPD family protein [Methylobacterium populi BJ001]
Length = 259
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 90/236 (38%), Gaps = 16/236 (6%)
Query: 4 SKKSDSYQGNSPLG-CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ P + EI + P + ++ + +++ LLS ++
Sbjct: 10 PAAPRQKRREMPATDSAPLKDKALEIHRRLCGVYECPISYFHSLDPLSELISSLLSHRTR 69
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--- 119
+ + +A K L ++ + ++ IR++ K+ I ++ +
Sbjct: 70 NADSGRAFKALRARWPDWAEIEQASVEDIEATIRSVTWPELKAPRIKAVLAAVRERVGAL 129
Query: 120 ------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPG 172
D + + L +PGIG K + +LS + + VD+H R++ R GL
Sbjct: 130 SLDFLGDMSVDEARGWLEAIPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGS 189
Query: 173 KTPNKVEQSLLRIIPPKHQY-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
K ++LR P + H L+LHG+ VC P C C++ ++C
Sbjct: 190 KVDVGPSHAVLRAQLPDDWSAQKLYDNHEVLMLHGQRVCFHHSPACGRCVLLDICP 245
>gi|227496751|ref|ZP_03927024.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
gi|226833743|gb|EEH66126.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
Length = 86
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDTH+ R+S R+G K P KVE+ + + P + + L+ HGR VC AR P+C+
Sbjct: 12 TVDTHVGRLSRRLGWTEHKDPFKVEKDIASLWDPTRWTDGCHRLIEHGRAVCHARSPRCE 71
Query: 215 SCII--SNLCK 223
C++ + LC
Sbjct: 72 QCLLLAAGLCP 82
>gi|21673988|ref|NP_662053.1| A/G-specific adenine glycosylase, putative [Chlorobium tepidum TLS]
gi|21647133|gb|AAM72395.1| A/G-specific adenine glycosylase, putative [Chlorobium tepidum TLS]
Length = 273
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 67/183 (36%), Gaps = 5/183 (2%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + + + + + ++V+ ++ Q+ V E +
Sbjct: 6 VEAFQAKIFDFYEKNRRSFPWRLTTDRYAVMVSEVMLQQTQADRVASRFARWLERFPDVR 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ + +++ +G + + + +I + ++P L LPGIG +
Sbjct: 66 SLASASLREVLEEWSGLGYNGRGQRLHRAAAM-IIERYGGEVPAEPAQLIELPGIGVYTS 124
Query: 142 NVILSMAFGIPTIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
I A + VDT+I R+ + + L+ TP + ++P + H L+
Sbjct: 125 RSIPVFADNLDIAAVDTNIRRVLIHELNLSESITPKALLDVAEVVLPKGRSRDWHNALMD 184
Query: 201 HGR 203
+G
Sbjct: 185 YGA 187
>gi|312794282|ref|YP_004027205.1| helix-hairpin-helix motif protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181422|gb|ADQ41592.1| helix-hairpin-helix motif protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 230
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 10/201 (4%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ K+P + E + + ++ +L ++ V H+ + + +
Sbjct: 16 FYRTNGRKYPW-RCE---RTPYKVYLSEVLLQRTRADQVEPVFNHIVSVCPDIRTLYNRF 71
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
++ +Q + + E + ++ +D KIP L +PGIG A I
Sbjct: 72 DEVVQRMLSLGRRC--RLEYFKTGLEYMLKNYDGKIPADRNLLLAIPGIGNYIAAAIRIF 129
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI----IPPKHQYNAHYWLVLHGR 203
+GIP + +DT++ R+ R+ + ++ + + +P K Y ++
Sbjct: 130 GYGIPDVIIDTNVVRVLCRLYGLQPDGETRRKKYFIELAGTHLPQKSFVEYSYGILDFAA 189
Query: 204 YVCKARKPQCQSCIISNLCKR 224
VC+ +P C C ++ LC
Sbjct: 190 EVCRPHRPGCNMCELNFLCDY 210
>gi|167628251|ref|YP_001678750.1| base excision repair protein, hhh-gpd family [Heliobacterium
modesticaldum Ice1]
gi|167590991|gb|ABZ82739.1| base excision repair protein, hhh-gpd family [Heliobacterium
modesticaldum Ice1]
Length = 231
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 12/200 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRT 97
P+ ++V +L+ NV A + L + + +++ +R+
Sbjct: 21 PRHWWPADTTLEMVVGAILTQNVAWKNVVTAIEQLKQAGLLDISALAEAPREQVARLVRS 80
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQT--------LEGLTRLPGIGRKGANVILSMAF 149
Y +K+E + + +++E+ ++ + L + GIG++ A+ I+
Sbjct: 81 TRYYNQKAERLQGFARRIVDEYGGRLENLLSLEAGELRKRLLDIKGIGKETADCIILYGA 140
Query: 150 GIPTIGVDTHIFRISNR-IGLAPGKTPNKVEQSLLRIIPPKHQ--YNAHYWLVLHGRYVC 206
P VD + RI +R + ++++ + P H + G C
Sbjct: 141 QQPIFVVDAYTRRIFSRLGYFSEKVGYDEMQAFFAERLEPDLYLFQEYHAQIDGLGNRYC 200
Query: 207 KARKPQCQSCIISNLCKRIK 226
A+ P C C + + C +
Sbjct: 201 LAKGPSCAECPLGDCCTYYR 220
>gi|316965796|gb|EFV50469.1| putative helix-hairpin-helix motif protein [Trichinella spiralis]
Length = 488
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 76/200 (38%), Gaps = 18/200 (9%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYV----NH--------FTLIVAVLLSAQSTDVNVNKA 69
K + + + L + N + + V+ ++ Q+ V
Sbjct: 83 EKVIPNFRNILLSWYECNCRSLPWRCLVKNPTLDRNTKAYYVWVSEIMCQQTQVATVKDY 142
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ E + + +++ +G Y +++N+ + I+ + KIPQT E
Sbjct: 143 FERWIEKWPSVVDLTETSLEEVNKIWSGLGYYS-RAKNLYEAAKIIRLSKNGKIPQTAEE 201
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-----R 184
L +LPG+GR A I S+AFG VD +I R+ +R+ +++ + L
Sbjct: 202 LEKLPGVGRYTACAISSIAFGERKATVDGNIQRVLSRMLCVGENPTSRIVKDHLWKIADN 261
Query: 185 IIPPKHQYNAHYWLVLHGRY 204
I + + L+ G
Sbjct: 262 AICSDRPGDFNQALMEIGSL 281
>gi|308161443|gb|EFO63889.1| Endonuclease III [Giardia lamblia P15]
Length = 323
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
L T + ++ G +L I +G R+K+E + +++ I ++ + IP+ L G+
Sbjct: 120 MKLNTWRLTAKNVVDSGLDELGRIIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGI 179
Query: 131 TRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLAPGKT---------PNKVEQ 180
+LPG G K ++++ + +G I VDTH+ RI+ R+ P+ V +
Sbjct: 180 LKLPGFGPKMGHLLVQIVYGQVEGIAVDTHVCRIAQRLRWVEKGMCEPNGKMLNPDDVAK 239
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
L+ +P + ++ LV G+ VCKA P+C C+I+
Sbjct: 240 QLVETLPKDKWRDINHLLVGFGQTVCKASFPECNRCLIA 278
>gi|242821687|ref|XP_002487731.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
gi|218712652|gb|EED12077.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
Length = 443
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 51/251 (20%)
Query: 25 LEEIFYLFSLKWPSP------KGELYYV--NH----FTLIVAVLLSAQSTDVNVNKATKH 72
+ +I P+ EL++ + F ++A++LS+Q+ D A +
Sbjct: 156 IYDIVKKMRTANPTALVDTMGCAELHWRASSPKDQRFQTLIALMLSSQTKDTVTAVAMQR 215
Query: 73 LFEIADTPQKMLAIGEKK------------------------------------LQNYIR 96
L ++ K L IR
Sbjct: 216 LHTELGEGEQPNNPSPSKTLIKKEENDADSIKVALEKKPSTLTVQNVLAVSPERLNELIR 275
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG- 155
++G + K++ I ++ IL +++++ IP T E L LPG+G K A + +S A+G
Sbjct: 276 SVGFHNNKTKYIKQVAIILRDKYESDIPPTPEELMALPGVGPKMAYLCMSAAWGKYLGIG 335
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
VD H+ RI+N G KTP + +L +P + + L+ G+ C +C
Sbjct: 336 VDVHVHRITNLWGWHATKTPEETRIALQLWLPRDKWHEINKLLIGLGQTACLPVGRRCGE 395
Query: 216 CIIS--NLCKR 224
C ++ LCK
Sbjct: 396 CDLAGTGLCKS 406
>gi|332298161|ref|YP_004440083.1| HhH-GPD family protein [Treponema brennaborense DSM 12168]
gi|332181264|gb|AEE16952.1| HhH-GPD family protein [Treponema brennaborense DSM 12168]
Length = 288
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 8/191 (4%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ + + ++ + + + ++V+ ++ Q+ V + E
Sbjct: 4 LSAARVSDFQQTILDQYRQSGRSFPWRETSDPYRILVSEIMLQQTQTERVLPKYEAWLER 63
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + +G +++ + + + + P+T + L LPGI
Sbjct: 64 FPTARSLADASLADALGLWNGLGY-NRRARFLQEACRAVCSSYGGVFPRTADELDALPGI 122
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP----PKHQY 192
G A + + A+G P + ++T+I + + ++ LL II
Sbjct: 123 GPYTARAVCTFAYGTPEVFIETNIRSVYIFFFFTAARDSAVSDKELLPIIDRTLYRADPR 182
Query: 193 NAHYWLVLHGR 203
+Y L+ +G
Sbjct: 183 TWYYALMDYGA 193
>gi|291546577|emb|CBL19685.1| Predicted EndoIII-related endonuclease [Ruminococcus sp. SR1/5]
Length = 153
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T + E+ ++P L Y + + L+V+V L+AQ TD VN + L+
Sbjct: 1 MTTQELAYEVISRLKKEYPDADCTLDYDDAWKLLVSVRLAAQCTDARVNVVVQDLYAKYP 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ A + ++ +R G+ + K+ +I + IL ++ +K+P+ L +LPG+GR
Sbjct: 61 DVAALAAAEPEAIEAIVRPCGLGKSKARDISACMRILHEQYHDKVPEDFNALLKLPGVGR 120
Query: 139 KGANVILSMAFGIPTIGV 156
K
Sbjct: 121 KKRKPDHGGRIRQACHCN 138
>gi|159111056|ref|XP_001705761.1| Endonuclease III [Giardia lamblia ATCC 50803]
gi|157433850|gb|EDO78087.1| Endonuclease III [Giardia lamblia ATCC 50803]
Length = 323
Score = 66.5 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
+L I +G R+K+E + +++ I ++ + IP+ L G+ +LPG G K ++++ +
Sbjct: 138 DELGRIIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGILKLPGFGPKMGHLLVQIV 197
Query: 149 FGIPT-IGVDTHIFRISNRIGLAPGKT---------PNKVEQSLLRIIPPKHQYNAHYWL 198
+G I VDTH+ RI+ R+ P+ V + L+ +P + ++ L
Sbjct: 198 YGQVEGIAVDTHVCRIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLL 257
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
V G+ VCKA P+C C+I+
Sbjct: 258 VGFGQTVCKASFPECNRCLIA 278
>gi|312792801|ref|YP_004025724.1| hhh-gpd family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179941|gb|ADQ40111.1| HhH-GPD family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 232
Score = 66.5 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAI 86
I+ W P+ F ++++ +L+ + +V KA +L + + +L
Sbjct: 21 IYNKLYEFWG-PQHWWPAETKFEMVISAILAQNISWNSVEKAICNLKRANILSIEGILQT 79
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRLPGIGR 138
++KL ++ G Y +K++ + + L EF++ + + + L GIG
Sbjct: 80 SDEKLAELVKPAGYYNQKTKRLKEFCNFLKKEFNSDLEKLFALDISSLRQVLLSQKGIGF 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPP--KHQYNA 194
+ A+ I+ P VD++ R+ R+GL + N ++ ++ + P K
Sbjct: 140 ETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYNDLQAIIMANLTPQTKFFNEF 199
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + +CK++KP C C + +C +
Sbjct: 200 HALIVKHCKEICKSKKPICNKCCLRLICNYFNE 232
>gi|163783118|ref|ZP_02178113.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159881798|gb|EDP75307.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 217
Score = 66.5 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 21 TPKELEEIFYLFSLKWPSP---KGELYYV-----NH-FTLIVAVLLSAQSTDVNVNKATK 71
+ EL E++ + +L Y + +++ +L+ + NV +A
Sbjct: 4 SRSELLEVYETLLNAYGEQNWWPVDLRYHREMGSDPREEIVIGAILTQNTAWKNVERALD 63
Query: 72 HLFE-IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
+L + + +L KLQ IR G YR+K+E + +++ L N + + E L
Sbjct: 64 NLKRAKLLSFEGILKTPVGKLQELIRPSGYYRQKAERLKNVAEFL-NPVSSVEKISREEL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP-- 188
+ G+GR+ A+ +L A P +D + RI R+ G + + +P
Sbjct: 123 LDIKGVGRETADAVLLYAGNRPFFVIDAYTKRIVKRVFGIEGSY-EGLRRWFEDNLPKDI 181
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K H L H + C+ +KP C C I++LC
Sbjct: 182 KLYKEFHALLDEHAKRFCR-KKPACDKCPINHLC 214
>gi|194333846|ref|YP_002015706.1| HhH-GPD family protein [Prosthecochloris aestuarii DSM 271]
gi|194311664|gb|ACF46059.1| HhH-GPD family protein [Prosthecochloris aestuarii DSM 271]
Length = 278
Score = 66.5 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 5/179 (2%)
Query: 36 WPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ S + E + + + ++V+ ++ Q+ V + + A ++
Sbjct: 18 YRSNRREFPWRETTDRYAVMVSEVMLQQTQAERVVPKYLAWMHRFPDVRSLAASPLREAL 77
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
+ +G + E + + ++I+EFD +P L RLPGIG + I A
Sbjct: 78 SLWNGLGY-NARGERLYRAAGMIIDEFDGVVPGEPHELIRLPGIGSYTSRSIPIFADNRD 136
Query: 153 TIGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
VDT+I RI + L + + + ++PP H L+ +G +++
Sbjct: 137 IATVDTNIRRILIYELALPESISASDLFAVAESVLPPSKSRQWHNALMDYGALYLTSKR 195
>gi|307718171|ref|YP_003873703.1| hypothetical protein STHERM_c04580 [Spirochaeta thermophila DSM
6192]
gi|306531896|gb|ADN01430.1| hypothetical protein STHERM_c04580 [Spirochaeta thermophila DSM
6192]
Length = 253
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSE 106
F + V +L + N +A L E + + + E++ L IR G Y K+
Sbjct: 69 AFEIAVGAVLVQNTAWTNARRALAVLLERSLCSPERILGLEEEALARLIRPCGYYTLKAR 128
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ L+ ++ L + G+GR+ A+ IL +G+P VD + RI +R
Sbjct: 129 RLAHLARFFLSCDG---LPERNALLGVWGVGRETADSILLYGYGVPVFVVDAYTRRIFSR 185
Query: 167 IGL--APGKTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+GL + +V ++ +PP H H LV H + C+ ++P C C + C
Sbjct: 186 LGLLASDDTPYEEVRSAVEEAVPPDHVCYNEFHALLVEHAKRFCR-KRPLCGECPLRLEC 244
>gi|194336561|ref|YP_002018355.1| HhH-GPD family protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309038|gb|ACF43738.1| HhH-GPD family protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 278
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 68/192 (35%), Gaps = 5/192 (2%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
+ + +E + + + + + ++V+ ++ Q+ V
Sbjct: 1 MTLSLNSRNIERFRQQIFDFYQLNRRSFPWRETTDRYAVMVSEIMLQQTQADRVVGKFLA 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
+ + + + +++ +G + + + + +++ FD +P E L
Sbjct: 61 WMDTFPDTETLASATLREVLILWSGLGYNSRGQR-LQNCAKVIMERFDGVVPARPEQLIT 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
LPGIG I A + VDT+I RI + L+ +++ ++
Sbjct: 120 LPGIGEYTCRSIPVFADNLDVAAVDTNIRRIIIHEFSLSEDTPKREIQSVAELLLAKGRS 179
Query: 192 YNAHYWLVLHGR 203
H L+ +G
Sbjct: 180 REWHNALMDYGS 191
>gi|39996713|ref|NP_952664.1| A/G-specific adenine glycosylase [Geobacter sulfurreducens PCA]
gi|39983594|gb|AAR34987.1| A/G-specific adenine glycosylase, putative [Geobacter
sulfurreducens PCA]
gi|298505724|gb|ADI84447.1| endonuclease III family protein [Geobacter sulfurreducens KN400]
Length = 285
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 75/191 (39%), Gaps = 10/191 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TP + + + S + EL + + + ++V+ ++ Q+ V +
Sbjct: 16 LTPAVADLFRRIVYDWYASQRRELPWRETFDPYAILVSEIMLQQTQVERVREKYPTFLAE 75
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + A +++ + +G R+ N+ + ++ ++P L RLPGI
Sbjct: 76 FPNLRALAAAPLERVLAAWQGLGYNRRAV-NLKRCAEAVVASLGGELPADPNELVRLPGI 134
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII----PPKHQY 192
G + + + AF P ++T+I + A + + + L+ +I +
Sbjct: 135 GTYTSRAVAAFAFNTPLPFIETNIRSVYIHHFFADQSSIHD--RDLMPLIEQTLDRDNPR 192
Query: 193 NAHYWLVLHGR 203
+Y L+ +G
Sbjct: 193 EWYYALMDYGS 203
>gi|320582064|gb|EFW96282.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase [Pichia
angusta DL-1]
Length = 383
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML--------AIGEKKLQNYIRTIGI 100
F +++++LS+Q+ D + K L + + I E L I +G
Sbjct: 154 FQCLISLMLSSQTKDEVNFQVMKILQDYFISKGYEHGLSLEAILDIDELVLDQLIYKVGF 213
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+R+K+ I ++IL +++ +IP+T+E +T PG+G K ++L +A+ I T VDTH
Sbjct: 214 HRRKATYIKQTANILHEKYNGEIPRTIEEITSFPGVGPKMGFLLLQIAWNINTGIGVDTH 273
Query: 160 IFRISNRIGLAP---GKTPNKVEQSLLRIIP--PKHQYNAHYWLVLHGRYVCKARKPQCQ 214
+ R++ P +P V + ++ + + LV G+ VC ++P+C
Sbjct: 274 MQRMAKIFKWVPASKNMSPEYVRRCFESMLWDHKEEWSRINPILVGFGQVVCLPQRPRCD 333
Query: 215 SCIISN--LCKRIKQ 227
C +S +C + +
Sbjct: 334 VCTLSRTGICPAVDK 348
>gi|319790406|ref|YP_004152039.1| HhH-GPD family protein [Thermovibrio ammonificans HB-1]
gi|317114908|gb|ADU97398.1| HhH-GPD family protein [Thermovibrio ammonificans HB-1]
Length = 221
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKM 83
+ ++ + + P+ F + V +L+ +T N ++A +L + TP+ +
Sbjct: 6 IAQLLQVLLEHFG-PQNWWPAETPFEVCVGAVLTQNTTWENASRAVGNLKKANLLTPEAL 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLTRLPGIG 137
+ E +LQN I+ G +R+K+ + LS ++ E + L + GIG
Sbjct: 65 SSTDEGELQNLIKPAGFFRQKARYLKELSRFVVREGGIEGLKAQPLKVLRPKLLNVKGIG 124
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPP-----KH 190
+ A+ IL A P+ VD + R+ R+G+ G++ N+V+ + IPP K
Sbjct: 125 PETADSILLYALDKPSFVVDKYTKRLLYRLGVLEGESVSYNRVKTLVEGEIPPTEEHLKE 184
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V + CK R P C+ C + LC
Sbjct: 185 YKELHALIVELCKRYCKTR-PNCRECPLRELC 215
>gi|109899281|ref|YP_662536.1| Iron-sulfur cluster loop [Pseudoalteromonas atlantica T6c]
gi|109701562|gb|ABG41482.1| Iron-sulfur cluster loop [Pseudoalteromonas atlantica T6c]
Length = 83
Score = 66.1 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 147 MAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC 206
M F PTI VD HIF +SNRI +A GK + EQ+ L+++P + + + H WL+LH RY+C
Sbjct: 1 MCFAGPTIAVDAHIFSVSNRIKIAMGKNVDLAEQNQLKVVPAEFKVDVHDWLILHDRYIC 60
Query: 207 KARKPQCQSCIISNLCKRIKQ 227
AR+P+C +C+I +LC+ +
Sbjct: 61 MARQPRCGACVIEDLCEFKDK 81
>gi|218658756|ref|ZP_03514686.1| endonuclease III protein [Rhizobium etli IE4771]
Length = 80
Score = 66.1 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 42/53 (79%)
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P + L++++P ++ Y+AH+WL+LHGRY CKAR+P+C+ C+I+++CK ++
Sbjct: 7 PTRSRARLMKVVPKQYLYHAHHWLILHGRYTCKARRPECERCVIADICKSPEK 59
>gi|298530217|ref|ZP_07017619.1| HhH-GPD family protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509591|gb|EFI33495.1| HhH-GPD family protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 215
Score = 65.7 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 12/192 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL-QNYIRT 97
P F + V +L+ + NV KA +L + +A + +L IR
Sbjct: 20 PSQWWPGETPFEICVGAVLTQNTNWSNVQKAINNLKSRDLLHPEKMASLDDELLAELIRP 79
Query: 98 IGIYRKKSENIISLSHILINEFDNKIP--------QTLEGLTRLPGIGRKGANVILSMAF 149
G +R K+ + +L L E +P Q + L ++ GIG + A+ IL A
Sbjct: 80 SGYFRIKARRLKNLLEFLRLECAYHLPDLSSQDLQQLRDKLLQVKGIGPETADSILLYAL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
P+ VD + RI NR L +++ + +P H LV G+ C
Sbjct: 140 EKPSFVVDAYTSRILNRHLLVHEDIDYHELRDFFMDRLPRDVALYNEYHALLVRTGKKWC 199
Query: 207 KARKPQCQSCII 218
P+C C +
Sbjct: 200 NKNNPRCDGCPL 211
>gi|159041229|ref|YP_001540481.1| HhH-GPD family protein [Caldivirga maquilingensis IC-167]
gi|157920064|gb|ABW01491.1| HhH-GPD family protein [Caldivirga maquilingensis IC-167]
Length = 233
Score = 65.7 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 15/217 (6%)
Query: 25 LEEIFYLFSLK---WPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
EEI S P+ ++ + +I++ +L Q+ V++ L +
Sbjct: 11 FEEISEKLSENGWFISEPESPKWWGGALSPEEVIISAILVQQTKWERVSEVMAKLRQGGL 70
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLT 131
+T + + + L N + + K+ ++ ++ + + + L
Sbjct: 71 NTLKTIAELNPLDLANALSGVNFRFTKASRLVRIARTITSMGGLRALSKLSDDEVRVMLL 130
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-- 189
+ G+G + A+ I+ A TI + T+ R+ RI G +L++++P
Sbjct: 131 SMDGVGYETADSIMLFALNRVTIPISTYTIRVIKRIYGYLGGGYEDWRLTLMKLLPRGLY 190
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
H +V G+ C P+C C + N C+ K
Sbjct: 191 EYKLFHAGVVTTGKEWCLKETPRCIECPLRNQCRFAK 227
>gi|321250635|ref|XP_003191874.1| A/G-specific adenine DNA glycosylase [Cryptococcus gattii WM276]
gi|317458342|gb|ADV20087.1| A/G-specific adenine DNA glycosylase, putative [Cryptococcus gattii
WM276]
Length = 552
Score = 65.7 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ + L+ G +CK P+C C + CK +
Sbjct: 267 GDWNQALMELGSQICKPANPECGICPLRKFCKGYAE 302
>gi|303239373|ref|ZP_07325901.1| HhH-GPD family protein [Acetivibrio cellulolyticus CD2]
gi|302593159|gb|EFL62879.1| HhH-GPD family protein [Acetivibrio cellulolyticus CD2]
Length = 227
Score = 65.7 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQ 81
+L EI+ L K+ + F +IV +L+ + NV KA +L +
Sbjct: 8 DQLLEIYGLLFEKFGD-QHWWPAKTQFEVIVGAVLTQFISWSNVVKAIDNLKKSNLLDAG 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKS--------ENIISLSHILINEFDNKIPQTLEGLTRL 133
K+ + ++ I+ G + +K+ + L F + E L ++
Sbjct: 67 KLYECDIEIIKELIKPAGFFNRKAVILKSVVAFVVEEFEGNLDKMFKTPLGVLREMLLKV 126
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPK--H 190
GIG + A+ IL A VD + RI +R+G V+ ++ +P +
Sbjct: 127 RGIGPETADSILLYAGYKKIFVVDAYTVRIFSRLGFIKNDEKYHDVQAFFMKHLPEEVDL 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V G C +KP+C SC++ + C
Sbjct: 187 YNQFHALIVKLGSDCCSGKKPKCASCVLKSRC 218
>gi|325283633|ref|YP_004256174.1| iron-sulfur cluster loop [Deinococcus proteolyticus MRP]
gi|324315442|gb|ADY26557.1| iron-sulfur cluster loop [Deinococcus proteolyticus MRP]
Length = 227
Score = 65.7 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 14/193 (7%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIG-------- 99
++ ++L+ Q+T + + L + L ++++ +R G
Sbjct: 26 PLDGLIRLILAQQNTWAVAQRQWEALKAAYPHWEAALLAEPEEIETVLRGAGGGLACSKS 85
Query: 100 ---IYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+ L + L LPG+G++ A+++L P V
Sbjct: 86 RAVWGILRRLEEERGRPSLRFLHRLPPAEARTVLQALPGVGQRTASLLLLFHLAQPAAAV 145
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLLR-IIPPKHQ--YNAHYWLVLHGRYVCKARKPQC 213
D++I R+ +R+ + P ++ L ++P H V HGR +C P+C
Sbjct: 146 DSNIERLLHRLEVVPPGWKADRQELWLEGVLPADAPLRAAFHRAGVRHGREICTRHAPRC 205
Query: 214 QSCIISNLCKRIK 226
+C++ C +
Sbjct: 206 PACVLREWCPSAQ 218
>gi|260362407|ref|ZP_05775361.1| endonuclease III [Vibrio parahaemolyticus K5030]
gi|308111310|gb|EFO48850.1| endonuclease III [Vibrio parahaemolyticus K5030]
Length = 71
Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ EI P+P+ EL + + F L++AVLLSAQ+TDV+VNKAT LF +A+T
Sbjct: 1 MNKEKRIEILERLRENNPNPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT 60
Query: 80 PQKM 83
PQ +
Sbjct: 61 PQSI 64
>gi|163852137|ref|YP_001640180.1| HhH-GPD family protein [Methylobacterium extorquens PA1]
gi|163663742|gb|ABY31109.1| HhH-GPD family protein [Methylobacterium extorquens PA1]
Length = 254
Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+ EI + P + ++ + +++ LLS ++ + + +A K L
Sbjct: 29 KHKALEIHRRLCGVYECPIPYFHSLDPLSELISSLLSHRTRNADSGRAFKALRARWSDWT 88
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTR 132
++ A ++++ I + K+ I ++ + D + + L
Sbjct: 89 EIEAASVEEIEATIHGVTWPELKAPRIKAVLAAVQERVGALSLDFLGDMSVDEARGWLEA 148
Query: 133 LPGIGRKGANVILSMAFGIP-TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PGIG K + +LS + + VD+H R++ R GL K ++LR P
Sbjct: 149 IPGIGPKTSAAVLSFSTLRMPALPVDSHHHRVAQRTGLIGAKVDVGPSHAVLRAQLPDDW 208
Query: 192 Y-----NAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ H L+LHG+ VC R P C C++ ++C
Sbjct: 209 SAQKLYDNHEVLMLHGQRVCFHRSPTCGRCVLLDICP 245
>gi|226357357|ref|YP_002787097.1| DNA-(apurinic or apyrimidinic site) lyase [Deinococcus deserti
VCD115]
gi|226319347|gb|ACO47343.1| putative DNA-(apurinic or apyrimidinic site) lyase (endonuclease
III) [Deinococcus deserti VCD115]
Length = 247
Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 16/218 (7%)
Query: 22 PKELEEI---FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P+ E + + ++ E + +++ +LS ++ + + A + L + D
Sbjct: 14 PERAELLQWMYARLRDEYGEKPLE-PRRDPMHELISTILSQRTNWRDEDAAYQELRTLGD 72
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE---------G 129
++A + + + IR K+ I + + + L
Sbjct: 73 -WDAIIAAPTEAVAHAIRRSNYPESKAPRIQATLRAIRDAPGGYNLDFLRELPVKDALKW 131
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
LT LPG+G K A+++L + P VDTH+ R++ R+G P ++LL ++PP
Sbjct: 132 LTDLPGVGIKTASLVLLFNYARPVFPVDTHVHRVNTRVGTIPRMGEQAAHRALLGLLPPD 191
Query: 190 HQYNA--HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H L+ HG+ VC +P+C C++ C
Sbjct: 192 PPLLYELHINLLKHGQKVCTWSRPRCLQCVLRERCDAF 229
>gi|312878128|ref|ZP_07738060.1| HhH-GPD family protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311795086|gb|EFR11483.1| HhH-GPD family protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 232
Score = 65.3 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAI 86
I+ W P+ F +++ +L+ + +V KA +L + + +L
Sbjct: 21 IYNKLYEFWG-PQHWWPAETKFEMVIGAILAQNISWNSVEKAICNLKRANILSIEGILQT 79
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRLPGIGR 138
++KL I+ G Y +K++ + + L EF++ + + + L GIG
Sbjct: 80 SDEKLAELIKPAGYYNQKTKRLKEFCNFLKREFNSDLEKLFALDISSLRQVLLSQKGIGF 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPP--KHQYNA 194
+ A+ I+ P VD++ R+ R+GL + N ++ ++ + P K
Sbjct: 140 ETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYNDLQAIIMANLTPQTKFFNEF 199
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + +CK++KP C C + +C +
Sbjct: 200 HALIVKHCKEICKSKKPICNKCCLRLICNYFNE 232
>gi|219119818|ref|XP_002180661.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408134|gb|EEC48069.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 65.3 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAIGEKKLQNYIR 96
+ + F ++++++LS+Q+ D V +A + + + + ++A+ +L +YI
Sbjct: 34 RTQTPRDFR--FQVLISLMLSSQTKDATVGEAIRSMQKANVLNVESIVAMDASELNSYIN 91
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG- 155
+G + K++ I IL +FDN IP T + LPG+G K A + ++A+ T
Sbjct: 92 KVGFHNNKTKFIKQTVEILKEKFDNDIPPTASIMMELPGVGPKMAYICENVAWNRQTGIG 151
Query: 156 VDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGR 203
VDTH+ R+ N + TP + L +P + V G+
Sbjct: 152 VDTHMHRLFNALNWVKSNTPEQTRVQLESWLPRDKWAEVNLLWVGFGQ 199
>gi|160871663|ref|ZP_02061795.1| base excision repair protein, HhH-GPD family [Rickettsiella grylli]
gi|159120462|gb|EDP45800.1| base excision repair protein, HhH-GPD family [Rickettsiella grylli]
Length = 219
Score = 65.3 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 83/205 (40%), Gaps = 11/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAI 86
I+ + + + F ++V LL+ + NV KA HL + ++ + +L +
Sbjct: 9 IYESLRTMYGR-QLWWPAESPFEVMVGALLTQNTNWSNVEKAFIHLKKQSNLSANAILRL 67
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLTRLPGIGRKG 140
L++ ++ G +R K+ + + + + E L + GIG +
Sbjct: 68 PTSVLESCLKPSGYFRIKTRRLQNYCRWYLKQGGYNGLDQRSTSTLREELLSVQGIGTET 127
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPP--KHQYNAHYW 197
A+ IL AF P +D + R+ R+ G + ++ +P H
Sbjct: 128 ADDILLYAFNRPVFVIDAYTRRLLQRLNRIQGHENYEYCQKIFETQLPKRVDLYKQYHAL 187
Query: 198 LVLHGRYVCKARKPQCQSCIISNLC 222
+V+H + C+ KP C C++ + C
Sbjct: 188 IVVHAKQHCRKTKPVCLQCLLQSRC 212
>gi|73749386|ref|YP_308625.1| HhH-GPD family DNA repair protein [Dehalococcoides sp. CBDB1]
gi|289433344|ref|YP_003463217.1| HhH-GPD family protein [Dehalococcoides sp. GT]
gi|73661102|emb|CAI83709.1| DNA repair protein, HhH-GPD family [Dehalococcoides sp. CBDB1]
gi|288947064|gb|ADC74761.1| HhH-GPD family protein [Dehalococcoides sp. GT]
Length = 223
Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 15/218 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQ 81
+ L +IF K+ P+ + F ++ +L+ + NV KA L E + +
Sbjct: 8 QNLADIFQRLLKKYG-PQHWWPAESRFEMMAGAVLTQSAAWTNVEKAISRLKEANLLSAE 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTRL 133
+L + L IR G + K + +LS+ L + + + L +
Sbjct: 67 AILQAADNALAESIRPSGYFNVKVRKLKALSNWLQTGYGGQAEKLLEIESSVLRNELLSV 126
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRII--PPKH 190
GIG + A+ IL A G P +D + RI +R+GL + +++ +
Sbjct: 127 WGIGEETADSILLYACGKPVFVIDAYTRRIFSRLGLTEKEAGYDHLQRLFTANLAADAAL 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
H +V H + C+ KP C+ C++ ++C+ ++
Sbjct: 187 YNEYHALIVRHAKEHCR-VKPGCEGCVLKDVCRFDYRE 223
>gi|303246513|ref|ZP_07332792.1| HhH-GPD family protein [Desulfovibrio fructosovorans JJ]
gi|302492223|gb|EFL52098.1| HhH-GPD family protein [Desulfovibrio fructosovorans JJ]
Length = 216
Score = 64.9 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 12/192 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRT 97
P G + F + V +L+ + NV +A +L + + A+ ++L IR
Sbjct: 20 PSGWWPADSAFEMAVGAILTQNTNWANVARAIDNLKAAGRFSAEALYALPVEELAELIRP 79
Query: 98 IGIYRKKSENIISLSHILINEFDNKI--------PQTLEGLTRLPGIGRKGANVILSMAF 149
G +R K+ + +L ++++E I E L + G+G + A+ IL
Sbjct: 80 AGYFRVKAARLRNLLALIVHELGGDITALADGGLDAARERLLAVKGVGPETADSILLYGL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
+P+ VD + RI NR LAP ++ + + +P H LV G C
Sbjct: 140 SLPSFVVDAYTARICNRHALAPEDAGYEELRELFMDALPEDTALYNEFHALLVRVGNGWC 199
Query: 207 KARKPQCQSCII 218
+ R P+C SC +
Sbjct: 200 RPRAPRCDSCPL 211
>gi|218888239|ref|YP_002437560.1| HhH-GPD family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218759193|gb|ACL10092.1| HhH-GPD family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 223
Score = 64.9 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 19/211 (9%)
Query: 30 YLFSLKWPS------PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD--TPQ 81
L + + P G + V +L+ + NV KA L + + Q
Sbjct: 7 RLLREMYAAMHARLGPSGWWPGETPLEICVGAVLTQNTAWTNVEKAICRLRDAGALASGQ 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI--------PQTLEGLTRL 133
+L++ E +L IR G +R K+ + +L L + L ++
Sbjct: 67 TLLSLPEAELSELIRPAGFFRLKAVRLRNLLRFLDDACGFDFGVLAGQDLDDLRPRLLKV 126
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPK--H 190
G+G + A+ +L A G+PT VD + RI +R G+ P P ++ + ++ P
Sbjct: 127 SGVGPETADSVLLYAVGLPTFVVDAYTRRILHRHGMVPDDIPYHELRDVFMDVLEPDVPL 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
H +V + C+AR P+C C + +
Sbjct: 187 YNEYHALIVRVAKDWCRARAPRCADCPLCSF 217
>gi|150020420|ref|YP_001305774.1| HhH-GPD family protein [Thermosipho melanesiensis BI429]
gi|149792941|gb|ABR30389.1| HhH-GPD family protein [Thermosipho melanesiensis BI429]
Length = 216
Score = 64.9 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 12/211 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT---KHLFEIADTPQ 81
++ ++ L ++ + +++ +L+ + NV KA +
Sbjct: 1 MKNLYNLLKKEYGKLGKWWPGTST-EILITAILTQNTNWKNVEKAMENIYKFTTKDNLLF 59
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-----KIPQTLEGLTRLPGI 136
+ ++KL I+ G + K+E I +L + L N K P E L ++ GI
Sbjct: 60 FLYDTPKEKLAEIIKPAGFFNIKAERIKNLLNFLKKRNFNLKYVEKEPNLREKLLKIKGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNA 194
G++ A+ IL AF P VD + R+ RI + +K+++ + P
Sbjct: 120 GKETADSILLYAFEFPIFVVDAYTKRLLKRIYGLNIEDYDKIQELFHKNYPKDTRLYQEF 179
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H +V H + C+ +KP C C C +
Sbjct: 180 HGLIVEHAKKYCR-KKPLCSKCFFGKKCNYL 209
>gi|320532334|ref|ZP_08033181.1| base excision DNA repair protein, HhH-GPD family [Actinomyces sp.
oral taxon 171 str. F0337]
gi|320135444|gb|EFW27545.1| base excision DNA repair protein, HhH-GPD family [Actinomyces sp.
oral taxon 171 str. F0337]
Length = 198
Score = 64.5 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 9/170 (5%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ +L + + ++V+ ++S Q+ V A + P ++
Sbjct: 26 AWYDVHARDLPWRRPGTTPWEVLVSEVMSQQTPVARVIPAWQEWMRRWPGPTELAQAPTA 85
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ +I + ++++ +P L+ L LPG+G A +L+ A
Sbjct: 86 EVLRVWGRLGYPRRALR-LIECARSVVDQHGGVLPDDLDALLALPGVGEYTAGAVLAFAH 144
Query: 150 GIPTIGVDTHIFRISNR----IGLAPGKTPNKVEQSLLRIIPPKHQYNAH 195
G + +DT++ R+ R L + L ++P AH
Sbjct: 145 GRRALVLDTNVRRVLARAVGGQALPAPSLNRAERERALNLLPDDDPAAAH 194
>gi|154250400|ref|YP_001411225.1| HhH-GPD family protein [Fervidobacterium nodosum Rt17-B1]
gi|154154336|gb|ABS61568.1| HhH-GPD family protein [Fervidobacterium nodosum Rt17-B1]
Length = 225
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 21/211 (9%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTPQKMLA 85
I WP + E +IV+ +L+ + NV +A ++ E+ D +
Sbjct: 21 IHGSLGKWWPGEREE--------IIVSAVLTQNTNWKNVERALNNIKEVCSGDILICLHN 72
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTLEGLTRLPGIGR 138
+ +++L N IR G Y K++ + L + L N + + L + GIG+
Sbjct: 73 LPDEQLTNLIRPAGFYNIKAKRLRQLLNWLENYEFKLDKIAGKDAFELRKELLEINGIGK 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNAHY 196
+ A+ I+ AF P +D + R+ RI ++ + + H
Sbjct: 133 ETADSIILYAFEKPIFVIDAYTKRLLKRIFGIEFNDYDEYREFFEDNYEKTVELYQEFHG 192
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+V H + C + KP+C C I + C +Q
Sbjct: 193 LIVEHAKLYCTS-KPKCDICPI-DFCLFNRQ 221
>gi|225871801|ref|YP_002753255.1| base excision DNA repair protein, HhH-GPD family [Acidobacterium
capsulatum ATCC 51196]
gi|225793588|gb|ACO33678.1| base excision DNA repair protein, HhH-GPD family [Acidobacterium
capsulatum ATCC 51196]
Length = 239
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 20/227 (8%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ L ++ + + P+ + +V L+ + +V ++ +L
Sbjct: 1 MTAASRLRTLYDTLAAAYG-PQHWWPSESPLETMVGACLTQGTAWTSVERSLANLRARDL 59
Query: 79 TPQK-MLAIGEKKLQNYIRTIGIYRKKSENI--------ISLSHILINEFDNKIPQTLEG 129
+LA+ E +L+ IR G ++K+ + L +
Sbjct: 60 LQFDALLALPEDELRELIRPSGFMQRKAATLRALLELVANEYGGSLERFAEAPAETARAQ 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPP 188
L + GIG + A+ IL A G P + VD ++ R+ R GLAP + +V+Q L
Sbjct: 120 LLAITGIGPETADAILLYALGQPAMVVDEYLRRVVVRHGLAPERVRYAEVQQLALAAFAE 179
Query: 189 K--------HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H H +V G+ C R P C C + + +Q
Sbjct: 180 ETDPAALADHCNEFHALVVQVGKAHC-GRTPNCAQCPLRGDLEYYQQ 225
>gi|297569523|ref|YP_003690867.1| HhH-GPD family protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925438|gb|ADH86248.1| HhH-GPD family protein [Desulfurivibrio alkaliphilus AHT2]
Length = 258
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 58/248 (23%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF------------- 74
I+ + P+ ++V +L+ ++ NV KA +L
Sbjct: 7 IYRQLQDFFG-PQHWWPGDTPLEIMVGAVLTQNTSWGNVEKAIDNLKAAGLLPTTLATTN 65
Query: 75 ----------------------------------EIADTPQKMLAIGEKKLQNYIRTIGI 100
+ + + + L IR G
Sbjct: 66 HPSGKTGDSPPREPGDGDGATGQQGRAANNFGEPDQNQCLLALRQLPPEVLAELIRPAGY 125
Query: 101 YRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPGIGRKGANVILSMAFGIPT 153
Y K+ + +L + + + + L + GIG + A+ I A G P
Sbjct: 126 YNLKARRLHNLLACIADGYGRVENFLALAANDLRQQLLAVKGIGPETADSICLYAAGKPI 185
Query: 154 IGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVCKARK 210
VD + RI +R L P + + +++ +P H +V G+ CK R
Sbjct: 186 FVVDAYTHRIFSRHQLLPEEADYHAIQEIFTDALPADPVLYNEYHALIVRLGKEFCKKRN 245
Query: 211 PQCQSCII 218
P+C C +
Sbjct: 246 PRCPECPL 253
>gi|282165629|ref|YP_003358014.1| putative endonuclease III [Methanocella paludicola SANAE]
gi|282157943|dbj|BAI63031.1| putative endonuclease III [Methanocella paludicola SANAE]
Length = 293
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 14/211 (6%)
Query: 26 EEIFYLFSLKWPSPKGE-LYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD--TPQK 82
++ + + + + + ++ +L+ T + + L + K
Sbjct: 75 NKLLLRLREFYR--RCWVMKLQDPYISLIITILTQNKTADSARRTFHKLQHRYNGIDVHK 132
Query: 83 MLAIGEKKLQNYIRTIGIYRKKS------ENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
M +K+L+ I G Y+ + I L + E L L G+
Sbjct: 133 MAGADKKELEELIHYSGPYKAAYIIECSRQIIERWGGSLEWMKKVSTEEAREALLSLYGV 192
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH--QYN 193
G K A+ +L + G VDTHI R+S R+GL+ ++ + + KH
Sbjct: 193 GPKTADCVLLFSLGHSVTPVDTHICRVSQRLGLSTSTGDSEAAKRKVKEDLEKKHRIPGM 252
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
AH ++ GR CKA P C + ++C +
Sbjct: 253 AHLLIINLGRDFCKALVPLHHICPVEDICPK 283
>gi|242208038|ref|XP_002469871.1| predicted protein [Postia placenta Mad-698-R]
gi|220731102|gb|EED84950.1| predicted protein [Postia placenta Mad-698-R]
Length = 562
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 27/200 (13%)
Query: 30 YLFSLKWP--SPKGELYYVNHFT----------------LIVAVLLSAQSTDVNVNKATK 71
+ + + + + V+ ++ Q+ V
Sbjct: 83 EALLEWYEGVHAARGMPWRKPYDPSMNNDQRAQRAYEVLVWVSEIMLQQTQVATVIPYYN 142
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T + + A + + + R +G Y + + + + + +
Sbjct: 143 RWMKKYPTIRDLAASDIETVNSIWRGLGYYSRAARLLAGAQKAVRDFGGRLPDNAKDMEA 202
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+PGIGR A I S+A+ + V L G T VE
Sbjct: 203 NIPGIGRYSAGAICSIAYNDRILAVHAPPKSKQTLDILWQGAT-AMVEGGT-------RP 254
Query: 192 YNAHYWLVLHGRY-VCKARK 210
+ + L+ G C+A K
Sbjct: 255 GDLNQALIELGSTPWCQAVK 274
>gi|315185377|gb|EFU19150.1| HhH-GPD family protein [Spirochaeta thermophila DSM 6578]
Length = 253
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSE 106
F + V +L + N +A L E + + + E++ L IR G Y K+
Sbjct: 69 AFEIAVGAVLVQNTAWTNARRALAVLLERSLCSPEGILGLEEEALARLIRPCGYYTLKAR 128
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ L+ ++ L + G+GR+ A+ IL +G+P VD + RI +R
Sbjct: 129 RLAHLARFFLSCDG---LPERNALLGVWGVGRETADSILLYGYGVPVFVVDAYTRRIFSR 185
Query: 167 IGL--APGKTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+GL + +V ++ + +P H H LV H + C+ ++P C C + C
Sbjct: 186 LGLLASDDTPYEEVRSAVEKTLPLDHVCYNEFHALLVEHAKRFCR-KRPLCGECPLRLEC 244
>gi|15605742|ref|NP_213119.1| endonuclease III [Aquifex aeolicus VF5]
gi|2982908|gb|AAC06526.1| endonuclease III [Aquifex aeolicus VF5]
Length = 220
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 17/214 (7%)
Query: 22 PKELEEIFYLFSLKWPSP---KGELYYV-----NH-FTLIVAVLLSAQSTDVNVNKATKH 72
+EL E++ + +L Y + +I+ +L+ ++ NV KA ++
Sbjct: 6 KRELIELYDKLLQFYGKQNWWPVDLEYHKTHGSDPREEVIIGAILTQNTSWKNVEKALEN 65
Query: 73 LFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
L K + + L I+ G YR+KS + ++ + E L
Sbjct: 66 LKREKALNLKAIKEIPTEKLMELIKPAGFYRQKSLYLKEFANKFPSISHL-KNVKREDLL 124
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH- 190
++ GIG++ A+ IL A VD + R+ R+ G ++++ + +P
Sbjct: 125 KVKGIGKETADAILLYALDRLEFVVDAYTKRLLERLWNIKGSY-EEIKRLFEKNLPKDLE 183
Query: 191 -QYNAHYWLVL-HGRYVCKARKPQCQSCIISNLC 222
H L+ H + CK +KP C+ C + C
Sbjct: 184 IYREFH-ALIDIHAKEFCK-KKPLCEECPLREKC 215
>gi|15921205|ref|NP_376874.1| hypothetical protein ST0964 [Sulfolobus tokodaii str. 7]
gi|15621990|dbj|BAB65983.1| 240aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 240
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 90/233 (38%), Gaps = 32/233 (13%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-----------------VNHFTLIVAVLLSAQS 61
+ T ++I ++ K L ++++ +L +
Sbjct: 10 MKTSLRADKIIQKLIQEFEKNKELLRQAGWIVSDVNSFEWWDGLKTADEILISSILVQMT 69
Query: 62 TDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
V K + L +I + K+ + E++++ I+ + Y+ K++ + L+ I+ +
Sbjct: 70 KWEIVKKVIERLRQIGLNKLDKLANLSEEEIEELIKGVNFYKTKAKRLKKLATIVKEKGL 129
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
I + + L + GIG + A + +P + RI +RI K+ +
Sbjct: 130 ENIVKNEKTLKEIEGIGDETAESLQLFVANLPVFPRSEYASRILSRIL------GEKISK 183
Query: 181 SLLRIIPPKHQYN-------AHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+I+ + + H +V G+ C + KP+C SCI +LC K
Sbjct: 184 KEAKILAESYLKDDVYKLKLFHAGIVTIGKIFCLS-KPKCNSCIFKDLCAYYK 235
>gi|147669995|ref|YP_001214813.1| HhH-GPD family protein [Dehalococcoides sp. BAV1]
gi|146270943|gb|ABQ17935.1| HhH-GPD family protein [Dehalococcoides sp. BAV1]
Length = 223
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQ 81
+ L +I+ K+ P+ + F ++ +L+ + NV KA L E + +
Sbjct: 8 QNLADIYQRLLKKYG-PQHWWPAESRFEMMAGAVLTQSAAWTNVEKAISRLKEANLLSAE 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTRL 133
+L + L IR G + K + +LS+ L + + + L +
Sbjct: 67 AILQAADSALAESIRPSGYFNVKVRKLKALSNWLQTGCGGQAEKLLEIESSVLRDELLSV 126
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRII--PPKH 190
GIG + A+ IL A G P +D + RI +R+GL +++++ +
Sbjct: 127 WGIGEETADSILLYACGKPVFVIDAYTRRIFSRLGLTEKEAGYDRLQRLFTANLAADAAL 186
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
H +V H + C+ KP C+ C++ ++C+ ++
Sbjct: 187 YNEYHALIVRHAKEHCR-VKPGCEGCVLKDVCRFDYRE 223
>gi|205373881|ref|ZP_03226683.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus coahuilensis
m4-4]
Length = 78
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +VE++L+R IP + H+ L+ GRY CKA+ PQC+SC + LC+ K+
Sbjct: 8 CKWKDSVLEVEKTLMRKIPSEKWSVTHHRLIFFGRYHCKAQNPQCESCPLLELCREGKK 66
>gi|147920389|ref|YP_685836.1| putative DNA glycosylase [uncultured methanogenic archaeon RC-I]
gi|110621232|emb|CAJ36510.1| putative DNA glycosylase [uncultured methanogenic archaeon RC-I]
Length = 220
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-D 78
+++ ++++ S ++ + F I +L Q+ NV++ L
Sbjct: 1 MKMNDIKTLYHILSAEFGPLYDWWVAGSPFERIAGAILVQQTRWENVDRVLTELKNRDLM 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR-----L 133
+P + A+ ++L++ +R G YR K++++ +++ + + + + R L
Sbjct: 61 SPGSIAALPLEELEDIVRPTGFYRNKAKSLKAVAEYFTASPIDSMSNKPQHVLRKELLAL 120
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ-- 191
GIG + A+VIL G P+ +D + ++ +G+ ++++ +P
Sbjct: 121 RGIGNETADVILLYVAGKPSFVIDAYTKKLCGCMGI--QGNYAELQRLFEDALPRDVPVY 178
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ H +V HG+ C + C SC ++ L ++ +
Sbjct: 179 QHYHALIVEHGKRYCGRKG--CDSCAVARL-RKYR 210
>gi|88604441|ref|YP_504619.1| HhH-GPD [Methanospirillum hungatei JF-1]
gi|88189903|gb|ABD42900.1| HhH-GPD [Methanospirillum hungatei JF-1]
Length = 288
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 76/186 (40%), Gaps = 6/186 (3%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
P ++ + S + + + + + + ++V+ ++ Q+ V K I
Sbjct: 14 PASIDRFNAMLSEFYVKNRRPMPWRDEITPYRVVVSEIMLQQTQVPRVLKKFDEFIRIFP 73
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
+ + + + +G ++++ ++ ++ ++IN +D +P+ L LPGIG
Sbjct: 74 DFAALAQASLEDVLRAWQGLGY-NRRAKYLLQIAQVIINRWDGIVPEDPAVLQTLPGIGA 132
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR--IIPPKHQYNAHY 196
A I+ + P + ++T++ R+ + +E + + H +Y
Sbjct: 133 ATAGSIVVFIYDRPVVFIETNVRRVFIHHFFQDRVGVSDMEIYPVLTWTLDHNHPREWYY 192
Query: 197 WLVLHG 202
++ +G
Sbjct: 193 SIMDYG 198
>gi|320105404|ref|YP_004180994.1| iron-sulfur cluster loop [Terriglobus saanensis SP1PR4]
gi|319923925|gb|ADV81000.1| iron-sulfur cluster loop [Terriglobus saanensis SP1PR4]
Length = 258
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 78/224 (34%), Gaps = 25/224 (11%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD----- 78
L ++ + P + + + T ++ LLSA++ + + L + +
Sbjct: 20 RLADLDARLRAMYGPPTPRIVW-DPLTQLIYSLLSARTKTPESHAVLRTLRDRYEGWPRE 78
Query: 79 ----TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQ 125
K+ +++ I +K+ + + K +
Sbjct: 79 DGIVCWDKLRDAPVAEIEESIALATFPDRKAPQLKQTLEEITRRVGKLSLDSLATYKTEK 138
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGV--DTHIFRISNRIGLAPGKTPNKVEQSLL 183
L + PG+G K + +++ ++ H G VE+ L+
Sbjct: 139 IRAWLEQFPGVGVKTSGAVVNFSWLHRKAICIDSHHQRIAIRLGLAPKGADARAVEEQLM 198
Query: 184 RIIPPK---HQYNAHYWLV-LHGRYVCKARKPQCQSCIISNLCK 223
I P + Q + H+ LV LHG+ C R+P+C C + +C
Sbjct: 199 AIAPEEWTAEQMDEHHSLVKLHGQERCTFREPRCSRCALREVCP 242
>gi|167997017|ref|XP_001751215.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697196|gb|EDQ83532.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 272
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 88/240 (36%), Gaps = 35/240 (14%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPS---------PKGELYYVNHFTLIVAVLLSAQST 62
P P+E E+ S + +V +LS +T
Sbjct: 19 SPYPDFARPYPEECYEVRNRLSQLHGTEDEHEDRTLTGCPSVRRTVLDSLVGTILSQNTT 78
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL---------SH 113
D N KA L + T +++ A KK+++ IR G+ K++ II++ S
Sbjct: 79 DNNSRKAFASLKQAFPTWEEVHAADPKKVEDAIRCGGLAETKAKRIINILDTIFTERGSI 138
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
L + Q L+R G+G K +L VDTH+FR+S +G P
Sbjct: 139 CLEYVRSMNVDQIKAELSRFKGVGPKTVACVLMFHLEQNEFPVDTHVFRLSKMLGWVPAS 198
Query: 174 -TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS-----------CIISNL 221
K + +P + +Y+ H LV HG+ C P+C C + N
Sbjct: 199 ADREKTYLHMNSRVPDEVKYDLHCLLVTHGKR-C----PRCAKGGRAQTAPDGPCPLINW 253
>gi|88602750|ref|YP_502928.1| HhH-GPD [Methanospirillum hungatei JF-1]
gi|88188212|gb|ABD41209.1| DNA-3-methyladenine glycosylase III [Methanospirillum hungatei
JF-1]
Length = 226
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 18/223 (8%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IAD 78
+ +L + + F I+ +L+ + +A L E
Sbjct: 4 WNTADLIHFYTALRDAHG-LQHWWPADTAFETIIGAILAQNVSWRGARQAVCALQEADLM 62
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT--------LEGL 130
+ G+ + IR+ Y +K+ I++ + D + + E L
Sbjct: 63 DADILYQAGQDTIAPLIRSSRYYNQKARKIMTFLSWFLETCDGDVSRMASLPTDQVREEL 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK 189
L G G + + IL A P VD + RI +R G + +++++ + + P
Sbjct: 123 LNLSGFGPETVDSILLYALEKPVFVVDAYTRRIGSRQGWFEDDASYDQMQEFFMNRLSPD 182
Query: 190 --HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL----CKRIK 226
+ H +V G +CK + P C C + + C+ +
Sbjct: 183 VPLYNDYHAQIVYLGNKLCK-KTPLCSICPVRDTGSTRCQYAR 224
>gi|291334218|gb|ADD93884.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C1463]
Length = 89
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + I + +P PK L + N FTL++AVLLSAQ+TD VN TK LF+ A
Sbjct: 1 MNKKERALFIEAKLNELFPRPKAPLNHTNAFTLLIAVLLSAQTTDKRVNVVTKELFKKAQ 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + ML +GE+ + YI+T G+ KK +
Sbjct: 61 SAKDMLKLGEQNVYQYIKTCGLAPKKPKQ 89
>gi|170741581|ref|YP_001770236.1| helix-hairpin-helix DNA-binding motif-containing protein
[Methylobacterium sp. 4-46]
gi|168195855|gb|ACA17802.1| helix-hairpin-helix motif [Methylobacterium sp. 4-46]
Length = 239
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 15/217 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P+ I + P + ++ + +V+ LLS ++ + +A K L
Sbjct: 6 PETALVIHRRLCAAYGCPIAYFHDLDPLSELVSSLLSHRTRNAESGRAFKALRARYPDWA 65
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTR 132
+++A +++ I + +K+ + ++ + D + L
Sbjct: 66 ELIAAPVAEVEAVITGVTWPEQKAPRLQAVLRAVRERHGSLSLDFLRDLDVASARAWLEA 125
Query: 133 LPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRIGLA-----PGKTPNKVEQSLLRII 186
+PGIG K + +LS + P + VD+H R++ R+GL G + L
Sbjct: 126 IPGIGPKTSAAVLSFSTLRRPALPVDSHHHRVAQRLGLIGPKVDVGPAHAILRAQLPEAW 185
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ Y+ H ++LHG+ C R P C +C++ +LC
Sbjct: 186 SAQDLYDNHEVMMLHGQRCCFHRAPACGTCVLLDLCP 222
>gi|156541064|ref|XP_001599788.1| PREDICTED: similar to RE40459p, partial [Nasonia vitripennis]
Length = 134
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTH 159
+++K + + S I+I +F+ IP+ ++ L LPG+G K A++ + +A+ + VDTH
Sbjct: 1 FQRKVQYLKKTSKIIIEKFNGDIPKNVKDLCSLPGVGPKMAHICMQIAWKEISGIGVDTH 60
Query: 160 IFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI 217
+ RISNR+ AP KTP + L + +P + ++ V G+ +C +++P+C C+
Sbjct: 61 VHRISNRLKWVPAPTKTPEETRNVLEKWLPRELWGEINHLFVGFGQVICHSQRPKCSDCM 120
Query: 218 ISNLCKRIK 226
N+C K
Sbjct: 121 NRNICPFAK 129
>gi|227904081|ref|ZP_04021886.1| hypothetical DNA-(apurinic or apyrimidinic site) lyase
[Lactobacillus acidophilus ATCC 4796]
gi|227868100|gb|EEJ75521.1| hypothetical DNA-(apurinic or apyrimidinic site) lyase
[Lactobacillus acidophilus ATCC 4796]
Length = 115
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 62/107 (57%)
Query: 18 CLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
L + +E + +P KGEL + N F L+ AV++SAQ+TD VN+ +
Sbjct: 4 KLLSDEEARNVLKRILELYPDAKGELQWDNKFHLLCAVVMSAQTTDKMVNRVMPKFSKDF 63
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
TP+ + +K++ IRTIG+YR K++++ + IL+ +++++IP
Sbjct: 64 PTPENLADAPIEKIEEDIRTIGLYRSKAKHLKETAKILVEKYNSQIP 110
>gi|258406277|ref|YP_003199019.1| HhH-GPD family protein [Desulfohalobium retbaense DSM 5692]
gi|257798504|gb|ACV69441.1| HhH-GPD family protein [Desulfohalobium retbaense DSM 5692]
Length = 218
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF-EIADTPQKMLAIGEKKLQNYIRT 97
P F +++ +L+ + NV +A L + + + A+ ++L IR
Sbjct: 21 PSHWWPGETPFEIVLGAILTQNTNWENVRRALNALRAQNLLSAPALAALDTEELAALIRP 80
Query: 98 IGIYRKKSENIISLSHILINEFDNKI--------PQTLEGLTRLPGIGRKGANVILSMAF 149
G YR K+ I + +E P+ E L + GIG + A+ I A
Sbjct: 81 AGYYRVKAGRIKNFLRFFEHEAGFDFTVLQALPTPEIRERLLGVNGIGPETADSIALYAL 140
Query: 150 GIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
PT VDT+ RI + + ++ +P H +V G++ C
Sbjct: 141 DKPTFVVDTYTARIFGRHGQIPEEISYADLQAYFTEALPEDTALFNEFHAQIVRVGKHWC 200
Query: 207 KARKPQCQSCIISNL 221
K ++PQC C +
Sbjct: 201 KKKQPQCHRCPLEPF 215
>gi|67477224|ref|XP_654116.1| endonuclease III [Entamoeba histolytica HM-1:IMSS]
gi|56471138|gb|EAL48730.1| endonuclease III, putative [Entamoeba histolytica HM-1:IMSS]
Length = 304
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 25/239 (10%)
Query: 11 QGNSPLGCLYTPKELEEIFYLFSLKWP--------------SPKGEL---YYVNHFTLIV 53
+ +Y+ E+ E + +P EL F ++
Sbjct: 2 KRKDKEEIIYSEDEISERLAILEEIKKKVETFDEKKLQFGTNPITELSPDEKSKPFYALI 61
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--LQNYIRTIGIYRKKSENIISL 111
LLS ++ + K +L E + + L + +K + I+
Sbjct: 62 GALLSTKTCETLRLKVMNNLIEHYKKLTPEIMSKASEDILNELLDGCYGKVRKIKFILEC 121
Query: 112 SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRIGLA 170
S ++ N +++ +P ++ L +LPGIG K A +I ++ F I VD + +R+
Sbjct: 122 SKVIHNNYNDIVPDNIDELKKLPGIGPKLAKIICAIGFKKIEGITVDQRSLLLLHRLEWI 181
Query: 171 --PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL--CKRI 225
N + + +P +H +L +Y+CK P C C ++ CK
Sbjct: 182 LKDTSNDNDAMKEVEEWLPKEHWNYFSKDTILFAKYLCKP-NPLCDQCPLAKHYVCKYY 239
>gi|222528627|ref|YP_002572509.1| HhH-GPD family protein [Caldicellulosiruptor bescii DSM 6725]
gi|222455474|gb|ACM59736.1| HhH-GPD family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 225
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 20 YTPKELEE----IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+++ + ++ W P+ F +++ +L+ + +V KA +L
Sbjct: 1 MKQEDVSQFLYNVYNKLYEYWG-PQHWWPAETKFEMVIGAILAQNISWNSVEKAICNLKR 59
Query: 76 IADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL------- 127
+ + + L I+ G Y +K++ + + L EF++ + +
Sbjct: 60 ANILSIEGIFQTSDEMLSELIKPAGYYNQKAKRLKEFCNFLKREFNSDLEKLFALDISSL 119
Query: 128 -EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLR 184
+ L GIG + A+ I+ P VD++ R+ R+GL + N ++ ++
Sbjct: 120 RQVLLSQKGIGFETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYNDLQAIVMT 179
Query: 185 IIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ P+ H +V H + +CK++KP C C + +C +
Sbjct: 180 NLTPQTQLYNEFHALIVKHCKEICKSKKPICNKCCLKLICNYYNE 224
>gi|78222863|ref|YP_384610.1| HhH-GPD [Geobacter metallireducens GS-15]
gi|78194118|gb|ABB31885.1| HhH-GPD [Geobacter metallireducens GS-15]
Length = 285
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 72/189 (38%), Gaps = 6/189 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TP+ + + L + + + ++V+ ++ Q+ V
Sbjct: 16 LTPEAATLFRQIVYGHYRRHGRTLPWRETSDPYAILVSEIMLQQTQVDRVTGKYMSFLSA 75
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ + A + + +G R+ N+ S ++ E+ +P T+ L +LPGI
Sbjct: 76 FPDFRALAAAPLDAVLAAWQGLGYNRRAL-NLKRCSEAVVTEYGGTLPSTIAELEKLPGI 134
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR--IIPPKHQYNA 194
G A + + AF +P+ ++T+I + + + E + L + +
Sbjct: 135 GHYTARAVAAFAFSVPSAFIETNIRTVFIHHFFNDSEKVHDREIAPLVEGALDYGNPREW 194
Query: 195 HYWLVLHGR 203
+Y L+ +G
Sbjct: 195 YYALMDYGA 203
>gi|108805043|ref|YP_644980.1| HhH-GPD [Rubrobacter xylanophilus DSM 9941]
gi|108766286|gb|ABG05168.1| HhH-GPD [Rubrobacter xylanophilus DSM 9941]
Length = 231
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 81/228 (35%), Gaps = 26/228 (11%)
Query: 14 SPLGCLYTPKELEEIFYLFSLK-------WPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
SP C+ P++ I + +P + E F +++A L ++T V
Sbjct: 2 SPATCMR-PEDRSRIAASLAALGIERGYSYPWHRAE----EPFRVLLAEYLLRRTTRKVV 56
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
+ + + + + ++ L R G+ + + + + +
Sbjct: 57 ARVYERVLSRYPSAAALATARDEDLWAVAREAGL---RRRTLQLIEIARQIVQQGGVQPS 113
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP----------N 176
E L LP +G A+ +L +F +D ++ R+ R+
Sbjct: 114 RERLLDLPFVGPYIADAVLLYSFNERVFPLDNNVQRVLYRVMQGTHPPKSMDPYRDKALE 173
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
++ L + + + H +++ VC+A P C++C + LC
Sbjct: 174 QIADVLTKNLDAVRLRHLHQGILVVAWEVCRA-APICRACTLRTLCLY 220
>gi|118368896|ref|XP_001017654.1| hypothetical protein TTHERM_00339900 [Tetrahymena thermophila]
gi|89299421|gb|EAR97409.1| hypothetical protein TTHERM_00339900 [Tetrahymena thermophila
SB210]
Length = 252
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 14/196 (7%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT-PQKMLAIGEKKLQNYIRTIGIYRK 103
++ F +VA++L+ Q+T+ NV K+ ++L + PQ++ + +K Y+ I K
Sbjct: 44 HIQDFQTLVAIILNQQTTNYNVEKSMRNLKFNINFTPQQVSIMNQKTFGKYLDGITYPGK 103
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
KS II ++ L+NEFD ++P + L+++ G+G+K + + + +
Sbjct: 104 KSVQIIEMAETLVNEFDGQVPTDPKELSKIKGVGKKTIELYQKRLENRNSKHIKLTPKTL 163
Query: 164 SN-------------RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
++ L I P H + L +C+ K
Sbjct: 164 LFLIRTQVIEDQDIGIYKDETQLNNQDIQDYLQSFIDPILWKTLHIPIDLFVDEICQEEK 223
Query: 211 PQCQSCIISNLCKRIK 226
P+C C +S+ C +
Sbjct: 224 PKCSECPLSDKCPSFQ 239
>gi|217077424|ref|YP_002335142.1| base excision repair protein, HhH-GPD family [Thermosipho africanus
TCF52B]
gi|217037279|gb|ACJ75801.1| base excision repair protein, HhH-GPD family [Thermosipho africanus
TCF52B]
Length = 210
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI---ADTPQ 81
++ ++ L + S + +IV +L+ + NV +A +++++ + +
Sbjct: 1 MKNLYKLLLKAYGSVGKWWPGTSE-EIIVTAVLTQNTNWKNVERALENIYKNKTKENLLE 59
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD-----NKIPQTLEGLTRLPGI 136
+ + L I+ G + K+ + +L L ++ E L ++ GI
Sbjct: 60 YLYELPIGYLSELIKPAGFFNLKARRLKNLLSFLKEYDFELSKIKRLKNLREKLLKINGI 119
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNA 194
G++ A+ IL A IP VD + R+ R+ + V+ P K
Sbjct: 120 GKETADSILLYALEIPVFVVDAYTKRLLKRMYNINLSDYDSVQNLFYENYPKNVKLFQEL 179
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +V H + VC+ + P C C IS+ CK+
Sbjct: 180 HGLIVEHSKAVCR-KNPICSECKISDNCKK 208
>gi|327399717|ref|YP_004340586.1| HhH-GPD family protein [Hippea maritima DSM 10411]
gi|327182346|gb|AEA34527.1| HhH-GPD family protein [Hippea maritima DSM 10411]
Length = 209
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 11/204 (5%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
E+F ++ + +++ +L+ + NV KA +L + +
Sbjct: 7 EVFNKLLDRYGK-QHWWPAQTKDEVVIGAILTQNTAWKNVEKAIDNLKKARLCSLNDINK 65
Query: 87 GEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG------LTRLPGIGRK 139
E ++ I+ G + +K + +++ L + G+GR+
Sbjct: 66 AELDLIKEAIKPAGFFNQKGLYLKNVATFFHKHGGFDQLSKFNASKLRELLLSIKGVGRE 125
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNAHYW 197
A+ IL AF P VD + + R + V++ + +P H
Sbjct: 126 TADSILLYAFEKPMFVVDAYTKKFLKRHEILTSDDYELVQRFFMENLPKDVGLFNEYHAL 185
Query: 198 LVLHGRYVCKARKPQCQSCIISNL 221
+V + + C+ KP C+ C + +L
Sbjct: 186 IVKNAKEYCR-TKPICRGCPLEDL 208
>gi|109899286|ref|YP_662541.1| Iron-sulfur cluster loop [Pseudoalteromonas atlantica T6c]
gi|109701567|gb|ABG41487.1| Iron-sulfur cluster loop [Pseudoalteromonas atlantica T6c]
Length = 55
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
VE+ L +++P + + + H+WL+LHGRY C ARKP+C SCI+ +LC+ +
Sbjct: 1 MVEKKLHKVVPAEFKVDVHHWLILHGRYTCIARKPRCGSCIVEDLCEFKDK 51
>gi|15639334|ref|NP_218783.1| A/G-specific adenine glycosylase, putative [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189025576|ref|YP_001933348.1| A/G-specific adenine glycosylase [Treponema pallidum subsp.
pallidum SS14]
gi|3322622|gb|AAC65331.1| A/G-specific adenine glycosylase, putative [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018151|gb|ACD70769.1| possible A/G-specific adenine glycosylase [Treponema pallidum
subsp. pallidum SS14]
gi|291059733|gb|ADD72468.1| HhH-GPD family protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 277
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 66/185 (35%), Gaps = 6/185 (3%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
++E+ + + + + + ++V+ + Q+ V +
Sbjct: 10 DIEKFQNAILDFYAQQGRDFPWRSTCDAYAILVSEFMLQQTQTERVCPKYAEWLHRFPSL 69
Query: 81 QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + +G +++ + + +++ + +P L +LPG+G
Sbjct: 70 ESLACAPFAHVLQAWIGLGY-NRRARFLHQSAKLIVERYCAVVPDDPSELKKLPGVGDYT 128
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI--IPPKHQYNAHYWL 198
A + A+ T+ ++T+I + R + E L + ++ +Y L
Sbjct: 129 AAAVACFAYNKATVFLETNIRAVFIRFFFPDTHQVSDRELLSLVRCTLYEENPRRWYYAL 188
Query: 199 VLHGR 203
+ +G
Sbjct: 189 MDYGA 193
>gi|257457287|ref|ZP_05622458.1| HhH-GPD family protein [Treponema vincentii ATCC 35580]
gi|257445209|gb|EEV20281.1| HhH-GPD family protein [Treponema vincentii ATCC 35580]
Length = 277
Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 75/194 (38%), Gaps = 7/194 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKH 72
L + TP + + + + + + ++++V+ + Q+ V +
Sbjct: 4 LEAVPTPDYADFQKAIL-DYYAAHGRSFPWRTTNDPYSILVSEFMLQQTQTERVVEKYNR 62
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
E+ T Q + A ++ +G +++ + + + +E+ +P + E L
Sbjct: 63 WMEVFPTVQDLAAASLVQVLEQWVGLGY-NRRARFLHQCAQTIASEYAGIVPDSPEALRT 121
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKH 190
L GIG A I + A+ P ++T+I + G + ++ + + K+
Sbjct: 122 LSGIGPYTAAAISTFAYNKPNAFIETNIRAVFIFFFFKDRSGISDKEIFPHIEASLYTKN 181
Query: 191 QYNAHYWLVLHGRY 204
+Y L+ +G
Sbjct: 182 PRLWYYALMDYGAE 195
>gi|288818636|ref|YP_003432984.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288788036|dbj|BAI69783.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308752225|gb|ADO45708.1| HhH-GPD family protein [Hydrogenobacter thermophilus TK-6]
Length = 220
Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 19 LYTPKELEEIFYLFSLKWP----SPKGELYYVNHF-----TLIVAVLLSAQSTDVNVNKA 69
+ L +++ + P E Y+ N +I++ +L+ ++ NV ++
Sbjct: 1 MSLKISLRKLYEKLLDLYGYQNWWPIDEEYHKNMGTDPRDEVIISAVLTQNTSWKNVERS 60
Query: 70 TKHLFEI-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ + + + + ++ EK LQ+ IR G Y KS+ + L+ + +N + +
Sbjct: 61 LERIKREGILSLEFVRSVDEKTLQDLIRPAGFYTLKSKRLKELA-LFMNPTEKVKYVSRG 119
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
L ++ GIGR+ A+VIL A G +D + R R G ++ +P
Sbjct: 120 DLLKIKGIGRETADVILLYAGGRLYFVIDKYTQRFIERFYGLKGSY-ESLKNFFEENLPK 178
Query: 189 --KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
K H + H + CK+ P C C + ++C
Sbjct: 179 DVKVYKEFHALMDEHAKRFCKSI-PLCGGCPLKDMC 213
>gi|307719106|ref|YP_003874638.1| A/G-specific adenine glycosylase [Spirochaeta thermophila DSM 6192]
gi|306532831|gb|ADN02365.1| putative A/G-specific adenine glycosylase [Spirochaeta thermophila
DSM 6192]
Length = 272
Score = 62.6 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 68/191 (35%), Gaps = 8/191 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ +P + + + + V+ ++ Q+ V + +
Sbjct: 12 QEEVLGFHRREGRDFPWRRT----RDPYAIFVSEMMLQQTQTSRVVGKYGEFLARFPSWE 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ + +G +++ + + I++ + ++P L LP +G A
Sbjct: 68 VLAGARLGEVLEVWQGLGY-NRRARGVWESARIVVERWGGRLPDEPGVLEGLPMVGPYTA 126
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL--LRIIPPKHQYNAHYWLV 199
+ + A+G P + V+T+I + + E + +Y L+
Sbjct: 127 RAVATFAYGRPCVFVETNIRTVFLDRFFPGREGVRDAEILPLVEETLYRDDVRTWYYALM 186
Query: 200 LHGRYVCKARK 210
G + KAR+
Sbjct: 187 DLGAAI-KARR 196
>gi|312623064|ref|YP_004024677.1| hhh-gpd family protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312203531|gb|ADQ46858.1| HhH-GPD family protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 225
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 20 YTPKELEE----IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+++ + ++ W P+ F +++ +L+ + ++ KA +L +
Sbjct: 1 MKQEDISQFLYNVYNKLYEYWG-PQHWWPAETKFEMVIGAILAQNISWISAKKAICNLKK 59
Query: 76 -IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL------- 127
+ + +L E+KL I+ G Y +K++ + + L EF++ + +
Sbjct: 60 LNILSVEGILQTPEEKLAELIKAAGYYNQKAKRLKEFCNFLKREFNSDLEKLFALDISSL 119
Query: 128 -EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLR 184
+ L GIG + A+ I+ P VD++ R+ R+GL + N ++ ++
Sbjct: 120 RQVLLSQKGIGFETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYNDLQAIIMA 179
Query: 185 IIPP--KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ P K H +V H + +CK++KP C C + +C +
Sbjct: 180 NLTPQTKFFNEFHALIVKHCKEICKSKKPICNKCCLRLICNYYNE 224
>gi|15678524|ref|NP_275639.1| endonuclease III-like protein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2621567|gb|AAB85002.1| endonuclease III homolog [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 175
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
+ ++ V + ++ E + + G++ ++ + ++G+ R ++ N+ L+ +
Sbjct: 1 MLHRTRAEQVLEIYENFVEKFPDFKSVCEAGQETIEKEMESLGL-RWRARNLHKLACEIE 59
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ +P+ L LPGIG ++ L + IP +DT+ RI R+ +
Sbjct: 60 SRHGGAVPKNKNDLLELPGIGNYISSAFLCFSKNIPEPLLDTNTVRIIGRLFDLEISDSS 119
Query: 177 KVEQSLL----RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ ++ +I+ + ++ G VC+A P C C + C ++
Sbjct: 120 RRKKDFETVMRKILEFGDCRHLSLSMIDFGEAVCRASDPLCHECPLKLSCNFYRR 174
>gi|224005196|ref|XP_002296249.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
gi|209586281|gb|ACI64966.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
Length = 202
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++A++LS+Q+ D V + + L + T + + + L I +G + K++ I
Sbjct: 45 YQVLMALMLSSQTKDAVVGETMRSLQKHGLTVENIHKTDSELLNKLIGKVGFHNNKTKYI 104
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF-GIPTIGVDTHIFRISNRI 167
+ I+I +++ IP T + L LPG+G K A ++ S+AF + IGVDTH+ RI N++
Sbjct: 105 KQATEIIITQYNGDIPSTADELMTLPGVGPKMAYIVESVAFGTVTGIGVDTHMHRIFNQL 164
Query: 168 GLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
K P + L +P + V G+ V
Sbjct: 165 AWVDSKNPEGTREQLEGWLPRDKWDEVNVLWVGFGQEV 202
>gi|167645377|ref|YP_001683040.1| HhH-GPD family protein [Caulobacter sp. K31]
gi|167347807|gb|ABZ70542.1| HhH-GPD family protein [Caulobacter sp. K31]
Length = 242
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 12 GNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
SPL + + P+ ++ + +V +S ++ D +
Sbjct: 8 STSPLEAMR---------DGLLRTFG-PQRPTKRLDPVSQLVKSSISGRTKDAVSWAVYQ 57
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL---- 127
L E T + + ++Q+ I+ + +K+ ++ ++ K+
Sbjct: 58 RLKERFATWEDLAETPAAEVQDLIKDVTFPEEKARHLPHALRLIQVRSGWKLSLDHLAEL 117
Query: 128 ------EGLTRLPGIGRKGANVILSMA-FGIPTIGVDTHIFRISNRIGLAPGKTPNK-VE 179
L LPG+G K A +L+ + + + VDTH+ R+++R+GL P
Sbjct: 118 ELDSARWWLQGLPGVGVKVAASVLNFSPLNMRALVVDTHVHRVASRMGLVPASYDTAHAY 177
Query: 180 QSLLRIIPP----KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++L+ ++P + Y H+ + G+ +C P+C +C + C R+
Sbjct: 178 RALMDLVPDSWTAEDLYELHWLMKGLGQLLCSHHAPRCGACALKATCSRV 227
>gi|296282210|ref|ZP_06860208.1| endonuclease III family protein [Citromicrobium bathyomarinum
JL354]
Length = 235
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 20/226 (8%)
Query: 15 PLGCLYTPKELEEIFYLFSLKWPS-PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHL 73
PLG + L ++ ++ + ++V ++ A++ N AT L
Sbjct: 4 PLGDDPRTETLRQLQPRLIQRFGRIERAPRERRAPEWVLVQGVIGARTRSETSNAATDRL 63
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI---------NEFDNKIP 124
+ + + + LQ + T E + + L+ + +
Sbjct: 64 LAEYGSWEAVADAPLEALQAQLATQTYPNVAGERLKACLTDLVARRGAVDLSHLEPMETD 123
Query: 125 QTLEGLTRLPGIGRKGAN-VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
+ L +LPG+GRK A V+ + + +D+H R+ R+GL P ++
Sbjct: 124 AAMVWLEQLPGVGRKIAAGVVNTSTLDRKALVLDSHHRRVLQRMGLVPQ--KADTARAYA 181
Query: 184 RIIP--PKHQY----NAHYWLV-LHGRYVCKARKPQCQSCIISNLC 222
I+P P + H+ L+ GR C+ C C LC
Sbjct: 182 AIMPAMPSEWSAADYDEHHLLMKEIGRAFCRPASMACGECPAQALC 227
>gi|254424749|ref|ZP_05038467.1| hypothetical protein S7335_4909 [Synechococcus sp. PCC 7335]
gi|196192238|gb|EDX87202.1| hypothetical protein S7335_4909 [Synechococcus sp. PCC 7335]
Length = 254
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 84/238 (35%), Gaps = 15/238 (6%)
Query: 5 KKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
+ D P ++ I +++ P + ++ + +V+ LLS ++ +
Sbjct: 9 QSPDQSPNQGPDQSENNTHKVIAIHQKLCVEYGCPIAYFHNLDPLSELVSSLLSHRTKNK 68
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF----- 119
+ +A K L + + + +Q I +K+ I + + E
Sbjct: 69 DSGRAFKQLRAAFPDWKLVRDAKTEAVQAAIAPCTWPEQKAPRIQQILQQITKERGTLSI 128
Query: 120 ----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI------GL 169
D + + L L G+G K + +L+ + +
Sbjct: 129 DFLADIPVAEARAWLETLTGVGPKTSAAVLAFSTLRRRALPVDSHHHRVAVRTELIPKKV 188
Query: 170 APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
G + +E L + Y+ H L+LHG++ C R P C C+I +LC +Q
Sbjct: 189 TVGPSHAILEAQLPEDWSAQQVYDNHEVLMLHGQHCCHYRNPTCDRCVILDLCPFGQQ 246
>gi|293324784|emb|CBK55600.1| C. elegans protein R10E4.5c, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 140
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
V+ I VDTH+ RISNR+G TP K +++L ++P ++ LV
Sbjct: 2 ANLVMQIAWGECVGIAVDTHVHRISNRLGWIKTSTPEKTQKALEILLPKSEWQPINHLLV 61
Query: 200 LHGRYVCKARKPQCQSCIISNLCKR 224
G+ C+ +P+C +C+ C
Sbjct: 62 GFGQMQCQPVRPKCGTCLCRFTCPS 86
>gi|297379366|gb|ADI34253.1| A/G-specific adenine glycosylase [Helicobacter pylori v225d]
Length = 252
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+ Y +++N+ + I + E ++++P + L +LPGIG AN IL F +
Sbjct: 1 MLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKS 60
Query: 154 IGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
VD +I R+ GL P T ++ + +N + L+ G +C KP+
Sbjct: 61 ACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPK 119
Query: 213 CQSCIISNLC 222
C C ++ C
Sbjct: 120 CAICPLNPYC 129
>gi|134106101|ref|XP_778061.1| hypothetical protein CNBA0640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260764|gb|EAL23414.1| hypothetical protein CNBA0640 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 575
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 15/171 (8%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ + V+ ++ Q+ V + E T + +++ R +G YR+
Sbjct: 128 AYEIWVSEVMLQQTQVTTVIAYWQRWMERWPTISDLAKADVEEVNAAWRGLGYYRRARSL 187
Query: 108 IISLSHILINEFDNKIPQTLEGLT--RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ ++ N N + + G+GR A I SMA+G+ T VD +I R+
Sbjct: 188 LAGAKTVMGNSKYNGRLPDDPAVLEKEIDGVGRYTAGAICSMAYGVRTPIVDGNIHRLLT 247
Query: 166 RIGLAPGK--------TPNKVEQSLLRIIPPKHQ-----YNAHYWLVLHGR 203
R+ +V L++ +P + + + L+ G
Sbjct: 248 RLLAVHAPQTGPATIKFLWRVADELIKHLPSGDKHNNVVGDWNQALMELGS 298
>gi|315185734|gb|EFU19501.1| HhH-GPD family protein [Spirochaeta thermophila DSM 6578]
Length = 272
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 8/191 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E+ +P + + + + V+ ++ Q+ V + +
Sbjct: 12 QEEVLGFHRREGRDFPWRRT----RDPYAIFVSEMMLQQTQTSRVVGKYGEFLARFPSWE 67
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ ++ + +G +++ + + +++ + ++P+ E L LP +G A
Sbjct: 68 VLAGARLGEVLEVWQGLGY-NRRARGVWESARMVVEWWGGRLPKEPELLEVLPMVGPYTA 126
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL--LRIIPPKHQYNAHYWLV 199
+ + A+G P + ++T+I + + E + +Y L+
Sbjct: 127 RAVATFAYGKPCVFIETNIRTVFLDRFFPGREGVRDAEILPLVEETLYRDDVRTWYYALM 186
Query: 200 LHGRYVCKARK 210
G + KAR+
Sbjct: 187 DVGAAI-KARR 196
>gi|302871235|ref|YP_003839871.1| HhH-GPD family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574094|gb|ADL41885.1| HhH-GPD family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 234
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAI 86
I+ W P+ F +++ +L+ + + KA +L + + +L
Sbjct: 22 IYNKLYEFWG-PQNWWPAETKFEMVIGAILAQNISWNSAEKAICNLKRANILSVEGILQT 80
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRLPGIGR 138
++KL I+ G Y +K++ + + L EF++ + + + L GIG
Sbjct: 81 PDEKLAELIKPAGYYNQKAKRLKEFCNFLKREFNSDLEKLFALDILSLRKILLSQKGIGF 140
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPP-KHQYNA 194
+ A+ I+ P VD++ R+ R+GL + + + + ++ P K
Sbjct: 141 ETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYSDLQAIIMAKLTPQTKFFNEF 200
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + +CK++KP C C + +C +
Sbjct: 201 HALIVKHCKEICKSKKPICNKCCLRLICNYFDE 233
>gi|326503606|dbj|BAJ86309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 723
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP- 187
L + G+G K + I ++ VD ++ RI R+ + ++ E + + P
Sbjct: 569 YLISINGLGAKSVDCIRLLSLEHKAFPVDVNVARIVTRLQWVELQCCSE-EFHSVDLYPL 627
Query: 188 ----------------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ Y H ++ G+ +C P C +C C+ K
Sbjct: 628 MQDVQSYLWPRLCTIDKEKLYELHCLMITFGKVICTKVDPNCNACPFRGDCRYYK 682
>gi|294944113|ref|XP_002784093.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
gi|239897127|gb|EER15889.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
Length = 292
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 37 PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA-----IGEKKL 91
P E F L++AV+LS+Q+ D KA +L + + EK L
Sbjct: 9 PEATEE---DRCFQLLIAVMLSSQTKDQENAKAMHNLHSHFKGNGGLTRANLAGMDEKDL 65
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
IR +G + K+ N+I +++IL +F+ K+P ++E L LPG+G K A +++ + G
Sbjct: 66 DAQIRGVGFHNTKTRNLIKVANILKEQFNGKVPDSMEDLLSLPGVGPKMAVLVMEIGHGH 125
Query: 152 PT--IGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
I VDTH+ RI+ +G KTP Q L +P + + + LV G+ V
Sbjct: 126 RDAGICVDTHVHRIAAMLGWTKNAKTPEATRQQLEARLPLEVWPDMNLLLVGLGQMV--Q 183
Query: 209 RKP-----QCQSC--IISNL 221
++P +C C ++ L
Sbjct: 184 QRPFELLRRCIDCIHPLAAL 203
>gi|329766249|ref|ZP_08257807.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137308|gb|EGG41586.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 170
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/141 (41%), Positives = 86/141 (60%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F++++ +LSA++ D KA K LF +++ K ++ I++IG Y KS+ I
Sbjct: 27 FSILIGTILSARTKDETTTKAVKVLFSKYKNAKELANAKTKDVEKIIKSIGFYHVKSKRI 86
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
I ++ I+ +++ K+P LE L LPG+GRK AN +L AF P I VD H+ RISNR+G
Sbjct: 87 IEVAKIIDSKYKGKVPDNLEKLVELPGVGRKTANCVLVYAFDKPAIPVDIHVHRISNRLG 146
Query: 169 LAPGKTPNKVEQSLLRIIPPK 189
L KTP + E L+RIIP K
Sbjct: 147 LVNTKTPEETEHELMRIIPKK 167
>gi|302338793|ref|YP_003803999.1| HhH-GPD family protein [Spirochaeta smaragdinae DSM 11293]
gi|301635978|gb|ADK81405.1| HhH-GPD family protein [Spirochaeta smaragdinae DSM 11293]
Length = 268
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 8/181 (4%)
Query: 29 FYLF-SLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
F + + + + + ++++ ++ Q+ V + L PQ M
Sbjct: 6 FRRLIYEFYKKNRRSFPWRETNDPWLILLSEMMLQQTQTSRVATKWESLAGRFPNPQTMA 65
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ +L + +G + + + +P T +GL LP IG A +
Sbjct: 66 DVELAELLSLWSGLGY--NRRALALKKIAERVVSTGGSLPDTYDGLVALPMIGPYTAKAV 123
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSLLRIIPPKHQYNAHYWLVLHG 202
L+ A+ P + ++T+I RI + ++ + + K N +Y L+ +G
Sbjct: 124 LAFAYNRPVVFIETNIRRIFIHHFFPDQEKVTDRQILPLVEETLDRKDPRNWYYALMDYG 183
Query: 203 R 203
Sbjct: 184 S 184
>gi|222628678|gb|EEE60810.1| hypothetical protein OsJ_14411 [Oryza sativa Japonica Group]
Length = 1072
Score = 61.9 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 51/164 (31%), Gaps = 9/164 (5%)
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
A + I ++ + + + + L + + L
Sbjct: 299 WEALMNAPFADVVDCIKDRGQHSQMAFRILAFLIRMKRDHGNIDLEWLRFIPRAKAKQYL 358
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--- 187
+ G+G K + I ++ ++F + + +++ P
Sbjct: 359 HSVIGLGHKSVDCIRLLSLRHRAFPAS-YLFSNQIILPIDTNIAHIVTRLGWVQLRPLPS 417
Query: 188 -----PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+Y H ++ G+ +C+ KP C +C ++ CK K
Sbjct: 418 SQEFHRVDKYELHCQMITFGKAICRKSKPNCGACPFTSECKYYK 461
>gi|219852759|ref|YP_002467191.1| HhH-GPD family protein [Methanosphaerula palustris E1-9c]
gi|219547018|gb|ACL17468.1| HhH-GPD family protein [Methanosphaerula palustris E1-9c]
Length = 297
Score = 61.9 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 3/173 (1%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
F P + + ++++ ++ Q+ V + T + + A +
Sbjct: 43 FYHAHGRPMAWRETRDPYRILISEVMLQQTQVNRVKEKYPLFIGAFPTFKTLAAAPLSSV 102
Query: 92 QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ + +G R+ + ++ ++ + + L LPGIG+ A I++ AF
Sbjct: 103 LDRWQGLGYNRRAVALHRAAGIVV-ADWGGHLKEDPADLVTLPGIGKATAASIVAFAFNR 161
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSL--LRIIPPKHQYNAHYWLVLHG 202
PT+ ++T+I R+ A E R + ++ +Y L+ G
Sbjct: 162 PTVFIETNIRRVFIHYFCADRDGVTDGEILPLVERTLDRENPREWYYALMDFG 214
>gi|123499885|ref|XP_001327722.1| endonuclease III [Trichomonas vaginalis G3]
gi|121910655|gb|EAY15499.1| endonuclease III, putative [Trichomonas vaginalis G3]
Length = 82
Score = 61.9 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 148 AFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
I VDTH+ R++NR+ PN Q L II +A +G+ +C+
Sbjct: 5 WNESTGITVDTHVHRLANRLHFVKTNNPNATSQKLSEIIDKDLWKDASQAFYYYGQQICQ 64
Query: 208 ARKPQCQSCIISNLCKRIK 226
A+KPQC CIIS+ C K
Sbjct: 65 AKKPQCDDCIISD-CPSRK 82
>gi|317153228|ref|YP_004121276.1| HhH-GPD family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316943479|gb|ADU62530.1| HhH-GPD family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 219
Score = 61.9 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI-GEKKLQNYIRT 97
P F + V +L+ + NV KA +L + + +L IR
Sbjct: 20 PSRWWPGDTPFEIAVGAILTQNTNWRNVEKAIANLKARDLLSARAMHALDTGELAELIRP 79
Query: 98 IGIYRKKSENIISLSHILINE--------FDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G Y K+ + + + L +E + + + + G+G + A+ IL A
Sbjct: 80 AGYYNIKAARLRNFLNFLNDEAGFEIESLKTQGMDELRSKVLSINGVGPETADSILLYAL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
+PT VD + +R+ +R GLA G + + + +P H +V G+ C
Sbjct: 140 EMPTFVVDAYTYRMMDRHGLAHEGIDYHGLRSIFMDALPEDVSLYNEFHALIVRVGKDWC 199
Query: 207 KARKPQCQSCIISNL 221
+ + C +C +
Sbjct: 200 RKKAGLCATCPLQPF 214
>gi|300681535|emb|CBH32632.1| conserved hypothetical protein, expressed [Triticum aestivum]
Length = 950
Score = 61.9 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
+K + A I + + S L
Sbjct: 452 TDKVNWEAVQQASFVDVAKCIAGRGQHYLLALRIQAFLTRIKKDHGSFDLDWLRCLPRES 511
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
+ L + G+G K + I ++ VD ++ RI R+ + ++ E + +
Sbjct: 512 AKKYLLSINGLGAKSVDCIRLLSLEHKAFPVDVNVARIVTRLQWVELQCCSE-EFHSVDL 570
Query: 186 IP-----------------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P + Y H ++ G+ +C P C +C C+ K
Sbjct: 571 YPLMQDVQNYLWPRLCTIDKEKLYELHCLMITFGKVICTKVDPNCNACPFRGDCRYYK 628
>gi|254673056|emb|CBA07684.1| putative A/G-specific adenine glycosylase [Neisseria meningitidis
alpha275]
Length = 236
Score = 61.5 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LR 184
+ L G+GR A I + +F +D ++ R+ R+ G +K ++
Sbjct: 1 METLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKFENSLWTLAES 60
Query: 185 IIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++P + L+ G VCK KP C C+++++C+ KQ
Sbjct: 61 LLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCLMADICEAKKQ 105
>gi|115433258|ref|XP_001216766.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189618|gb|EAU31318.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 667
Score = 61.5 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ + IGVD H+ RI+N G K P + +L +P + + LV G
Sbjct: 5 CMSAAWGKHEGIGVDVHVHRITNLWGWHKTKNPEETRMALESWLPKDKWHEINKLLVGLG 64
Query: 203 RYVCKARKPQCQSCIIS--NLCKR 224
+ VC +C C ++ LCK
Sbjct: 65 QTVCLPVGRRCGECDLAGTKLCKS 88
>gi|85375167|ref|YP_459229.1| endonuclease III family protein [Erythrobacter litoralis HTCC2594]
gi|84788250|gb|ABC64432.1| endonuclease III family protein [Erythrobacter litoralis HTCC2594]
Length = 225
Score = 61.5 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 82/215 (38%), Gaps = 16/215 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + ++ ++V ++ AQ+ N +T L + + +
Sbjct: 2 LRRLQAALIARFGRIVRPADMRRPPEWVLVHGVIGAQTKTAASNASTDGLLAECGSWEAV 61
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRLP 134
A ++L+ ++ ++ + + +I E + +E L RLP
Sbjct: 62 AAAPVEELEVRLQRQTFPSVAAQRLKDCLNAIIAERGAVDLRHLSNLAIEDAMEWLERLP 121
Query: 135 GIGRK-GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY- 192
G+ RK A V+ + F + VD H RI R+G+ P K L I P+
Sbjct: 122 GVARKNSAGVMNASLFERKAMVVDGHHRRIMQRMGMVPPKADTARTYDALMPIVPEEWSA 181
Query: 193 ---NAHYWLVL-HGRYVCKARKPQCQSCIISNLCK 223
+ H+ L+ G+ C+ R P C+ C + C+
Sbjct: 182 ADMDEHHLLLKKLGQTHCRPRAPHCEGCPVRADCR 216
>gi|300681534|emb|CBH32631.1| conserved hypothetical protein [Triticum aestivum]
Length = 840
Score = 61.5 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
+K + A I + + S L
Sbjct: 452 TDKVNWEAVQQASFVDVAKCIAGRGQHYLLALRIQAFLTRIKKDHGSFDLDWLRCLPRES 511
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
+ L + G+G K + I ++ VD ++ RI R+ + ++ E + +
Sbjct: 512 AKKYLLSINGLGAKSVDCIRLLSLEHKAFPVDVNVARIVTRLQWVELQCCSE-EFHSVDL 570
Query: 186 IP-----------------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
P + Y H ++ G+ +C P C +C C+ K
Sbjct: 571 YPLMQDVQNYLWPRLCTIDKEKLYELHCLMITFGKVICTKVDPNCNACPFRGDCRYYK 628
>gi|323247407|gb|EGA31365.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
Length = 77
Score = 61.5 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ EI P P EL + + F L++AVLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYI 95
P ML +G + +++YI
Sbjct: 61 PAAMLELGVEGVKSYI 76
>gi|289620474|emb|CBI53047.1| unnamed protein product [Sordaria macrospora]
Length = 604
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 189 KHQYNAHYWLVLHGRYVCKA--RKPQCQSCIISNLCKRIKQ 227
L+ G VC + P+C+ C I C+ +
Sbjct: 454 DRAGRWGQALMELGATVCLPAPKNPKCELCPIQATCRAYAE 494
>gi|330718079|ref|ZP_08312679.1| A/G-specific adenine glycosylase [Leuconostoc fallax KCTC 3537]
Length = 299
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 6/164 (3%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V + T + + E + +G Y ++ ++ + L E +
Sbjct: 1 MDTVLPYFERFMSTLPTVKDLADADEDVVLKLWEGLGYYS-RARHLQKAAQFLTYECNGV 59
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-----IGLAPGKTPNK 177
P T + L +LPG+G A I S++F VD ++FR+ +R +A KT
Sbjct: 60 WPTTAKDLQQLPGVGPYTAAAIASISFNEVVPAVDGNMFRVFSRLLKIDDDIARPKTRQV 119
Query: 178 VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
++L I+ P + + ++ G A+ P + + +
Sbjct: 120 FYDAILPIVDPVRPGDFNQAIMDLGSSYMTAKNPDSEHSPVKDF 163
>gi|299739957|ref|XP_002910259.1| A/G-specific adenine DNA glycosylase [Coprinopsis cinerea
okayama7#130]
gi|298404019|gb|EFI26765.1| A/G-specific adenine DNA glycosylase [Coprinopsis cinerea
okayama7#130]
Length = 599
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 74/226 (32%), Gaps = 34/226 (15%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSP--KGELYYVNH--------------FTLI 52
+++ + + + P+EL + + + K + + + +
Sbjct: 75 AWKHSRAMHRISKPEELRK---ALLEWFDTVRDKRGMPWRKPFDRTFTREQLAQRAYEVW 131
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
++ ++ Q+ + T + + ++ + +G Y + S +
Sbjct: 132 ISEIMLQQTQVI-TGSTELTWSVRFPTIKDLAKGAIDEVNALWKGLGYYSRASRLLAGAQ 190
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
++ + ++PGIGR A I S+A+G +D ++ R+ +R +
Sbjct: 191 KVVNELGGLLPDNAKDMEAKIPGIGRYSAGAICSIAYGEKAPVLDGNVTRLLSRFLMLYA 250
Query: 173 KTPNK-------VEQSLLRIIPP-------KHQYNAHYWLVLHGRY 204
K + +P ++ + + L+ G
Sbjct: 251 NPKAKGTLDVLWAAADAMVQVPGTPKDPTYQNPGDINQALIELGST 296
>gi|269861210|ref|XP_002650318.1| endonuclease III [Enterocytozoon bieneusi H348]
gi|220066231|gb|EED43722.1| endonuclease III [Enterocytozoon bieneusi H348]
Length = 228
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 15/195 (7%)
Query: 40 KGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP------QKMLAIGEKKLQN 93
K L Y F +++ ++LS Q+ D ++A L L L+
Sbjct: 38 KTSLTYK--FQILIKLILSVQTKDEITHEALYSLNNKLIKKTKQELGIDNLYYNMNVLEK 95
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP- 152
I +G Y KK I +++ + + + + G+G K + +
Sbjct: 96 AINKVGFYHKKIIYIKNIT--AKLHINPNLLNDISIVKSFNGVGPKISALYSQYGLNKFI 153
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
VD H+ RI NRI KTP + + L + ++N + LV G+ +CKA KP
Sbjct: 154 EHSVDLHVHRILNRIQFVNTKTPIQTQNILKCN---EIEFNINNVLVGFGQIICKA-KPL 209
Query: 213 CQSCIISNLCKRIKQ 227
C C I+ C +
Sbjct: 210 CTLCSINRQCPYNNK 224
>gi|91773816|ref|YP_566508.1| DNA-3-methyladenine glycosylase III [Methanococcoides burtonii DSM
6242]
gi|91712831|gb|ABE52758.1| 3-Methyladenine DNA glycosylase [Methanococcoides burtonii DSM
6242]
Length = 237
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 85/207 (41%), Gaps = 13/207 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ + +I+ + K + F +++ +L+ Q+ NV KA + L
Sbjct: 33 MKNERIHDIYKVLLEKIGHLQ-WWPAETPFEVVIGAILTQQTKWTNVEKAIEGLKRYDLI 91
Query: 80 PQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFD-----NKIPQTLEGLTRL 133
+ LA + + ++ IR G YR+K++ + ++ E + + L
Sbjct: 92 EPEKLARADLELIEKIIRCCGFYRQKAKRLKDIAGFFAREGIDDVLSMPTTELRNLMLSL 151
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQ 191
G+G + A+ I+ A P +D + R+ IG+ ++++ R +P
Sbjct: 152 RGVGNETADSIVLYAANKPKFVIDAYTTRMMKCIGI--EGNYLQLQEMFERDLPEDVSLY 209
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCII 218
H +V + + C + QC++CI+
Sbjct: 210 KEYHALIVEYAKSYCGKK--QCENCIL 234
>gi|294496530|ref|YP_003543023.1| DNA-3-methyladenine glycosylase III [Methanohalophilus mahii DSM
5219]
gi|292667529|gb|ADE37378.1| DNA-3-methyladenine glycosylase III [Methanohalophilus mahii DSM
5219]
Length = 210
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKM 83
L+ ++ ++ P+ F +IV +L+ Q+ NV KA +L + K+
Sbjct: 6 LQSVYDTLIREFG-PQQWWPAETPFEVIVGAILTQQTKWTNVEKAIDNLKQKNMIEAGKL 64
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE-----FDNKIPQTLEGLTRLPGIGR 138
I ++L+ +R G YR+K+ + +S + F + L L GIG
Sbjct: 65 AEIDLQELEEDVRCTGFYRQKASRLQEISSYFDHHGEEALFSLPTEKLRRRLLELKGIGP 124
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNAHY 196
+ A+ IL A G P +D + RI IG+ ++++ + IP + H
Sbjct: 125 ETADSILLYAAGKPCFVIDAYTTRIMRCIGIEGNYH--QLQEIFEKNIPKDVEMYKEYHA 182
Query: 197 WLVLHGRYVCKARKPQCQSCIISN 220
+V + + C A K QC C++
Sbjct: 183 LIVEYAKRYC-ATK-QCDKCLLKE 204
>gi|239906402|ref|YP_002953143.1| putative DNA glycosylase [Desulfovibrio magneticus RS-1]
gi|239796268|dbj|BAH75257.1| putative DNA glycosylase [Desulfovibrio magneticus RS-1]
Length = 216
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 12/195 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL------- 91
P G + V +L+ + KA L E +L +
Sbjct: 20 PSGWWPAKTPLEMAVGAILTQNTNWQGAAKAVAGLREAGLLDPHVLHAASLEAVAERIRP 79
Query: 92 --QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + + + L L + Q + L + G+G + A+ IL
Sbjct: 80 AGHFRVKAGRLKNLMALIVEELGGDLTALAGYDLDQARDKLLSVKGVGPETADSILLYGL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
+P VD + RI R GLAP + +++ + + +P H LV G C
Sbjct: 140 NLPAFVVDAYTARICFRHGLAPEEAGYDELRELFMDALPEDVRLYNEFHALLVRVGNAWC 199
Query: 207 KARKPQCQSCIISNL 221
+ R P+C +C +
Sbjct: 200 RPRAPKCAACPLERF 214
>gi|312134533|ref|YP_004001871.1| hhh-gpd family protein [Caldicellulosiruptor owensensis OL]
gi|311774584|gb|ADQ04071.1| HhH-GPD family protein [Caldicellulosiruptor owensensis OL]
Length = 234
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAI 86
I+ W P+ F +++ +L+ + + KA +L + + +L
Sbjct: 22 IYNKLYEFWG-PQNWWPAETKFEMVIGAILAQNISWNSAEKAICNLKRANILSVEGILQT 80
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRLPGIGR 138
++KL I+ G Y +K++ + + L EF++ + + + L GIG
Sbjct: 81 PDEKLAELIKPAGYYNQKAKRLKEFCNFLKREFNSDLEKLFALDISSLRKALLSQKGIGF 140
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS---LLRIIPP-KHQYNA 194
+ A+ I+ P VD++ R+ R+GL + + + + ++ P K
Sbjct: 141 ETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKISYSDLQAIIMAKLTPQTKFFNEF 200
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H +V H + +CK++KP C C + +C + +
Sbjct: 201 HALIVKHCKEICKSKKPICNKCCLRLICNYLDE 233
>gi|330860946|emb|CBX71223.1| hypothetical protein YEW_GO28080 [Yersinia enterocolitica W22703]
Length = 125
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
++ I P P EL Y F L+++VLLSAQ+TDV+VNKAT L+ +A+T
Sbjct: 1 MNQEKRVAILTRLRDNDPHPTTELVYSTPFELLISVLLSAQATDVSVNKATAKLYPVANT 60
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRK 139
PQ +L +G L++YI+TIG++ K+EN+I IL+ K + + + +
Sbjct: 61 PQAILDLGVDGLKSYIKTIGLFNTKAENVIKTCRILLENITAKYQKIAQHWKHYQVLAVR 120
>gi|56758404|gb|AAW27342.1| unknown [Schistosoma japonicum]
Length = 124
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLA--PGKTP 175
L L G+G K A + + A+ T VDTH+ RI+NR+ + P KTP
Sbjct: 1 MHTTWLSLSIFLIILLGVGPKMAYLAMKCAWKKVTGIGVDTHVHRITNRLKWSKRPTKTP 60
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ +L +P ++ + LV G+ +C+ P C C+ ++C +
Sbjct: 61 EETRMALEEWLPREYWDEINLLLVGFGQQICRPVNPNCMGCLNRSICPSASK 112
>gi|116180194|ref|XP_001219946.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
gi|88185022|gb|EAQ92490.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
Length = 977
Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL---SMAFGIPTIGVDTHIFR 162
+ + + +L + F++ IP T+ GLT LPG+G K A++ + + + IGVD H+ R
Sbjct: 702 RYLKTTAALLRDNFNSDIPPTIAGLTSLPGVGPKMAHLCMSAPNGWNRVEGIGVDVHVHR 761
Query: 163 ISNRIGLAPG--KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCI--I 218
I+N G +TP + +L +P ++ LV G+ VC +C C +
Sbjct: 762 ITNLWGWQAPASRTPEETRAALESWLPRDRWREINWLLVGLGQSVCLPVGRRCGDCEVGL 821
Query: 219 SNLCKR 224
LCK
Sbjct: 822 RGLCKS 827
>gi|323697915|ref|ZP_08109827.1| HhH-GPD family protein [Desulfovibrio sp. ND132]
gi|323457847|gb|EGB13712.1| HhH-GPD family protein [Desulfovibrio desulfuricans ND132]
Length = 217
Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 12/195 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI-GEKKLQNYIRT 97
P F + + +L+ + NV KA +L + + L +L IR
Sbjct: 20 PSEWWPGETPFEIAIGAILTQNTNWKNVEKALSNLKDAGVLEAEPLHALSVPRLAELIRP 79
Query: 98 IGIYRKKSENIISLSHILINE--------FDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G Y K++ I + L +E D ++ + + + GIG + + IL A
Sbjct: 80 AGYYNIKAKRIHNFLQFLKDEAEFDLLALKDRELAELRPKVLSINGIGPETGDCILLYAL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
PT VD + RI R GLA ++ + +P H +V G C
Sbjct: 140 DFPTFVVDAYTARILGRHGLAWEDIDYHGLQSIFMDALPEDVALYNEYHALIVRVGANWC 199
Query: 207 KARKPQCQSCIISNL 221
+ + C +C +
Sbjct: 200 RKKAGLCDACPLQPF 214
>gi|85710081|ref|ZP_01041146.1| endonuclease III family protein [Erythrobacter sp. NAP1]
gi|85688791|gb|EAQ28795.1| endonuclease III family protein [Erythrobacter sp. NAP1]
Length = 234
Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 16/219 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
L + ++ + ++V ++ AQ+ N +T L + + +
Sbjct: 14 LRRLQAALIERFGRIIRPSDKRRDPVWVLVHGVIGAQTKTAASNASTDGLIAEYGSWEAV 73
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRLP 134
A L+ ++ ++ + + +I + + + + L LP
Sbjct: 74 AAAPVGDLEARLQRQTFPTVAAQRLKQCLNTIIEQRGSVDLRHLSNLETAEAMAWLETLP 133
Query: 135 GIGRK-GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPKHQY 192
G+ RK A V+ + +F + +D H RI R+G+ P K K +L+ I+P +
Sbjct: 134 GVARKNSAGVMNASSFNRRAMVIDGHHRRIMQRMGIVPAKADTAKTYDALMPIVPEEWSA 193
Query: 193 ---NAHYWLVL-HGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H+ L+ G+ C+ R C+ C + C+ ++
Sbjct: 194 ADIDEHHLLLKKLGQTCCRPRAALCEDCPAAPDCETARK 232
>gi|126179665|ref|YP_001047630.1| HhH-GPD family protein [Methanoculleus marisnigri JR1]
gi|125862459|gb|ABN57648.1| HhH-GPD family protein [Methanoculleus marisnigri JR1]
Length = 294
Score = 59.9 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
TP+ ++ L + + +L + + + ++V+ ++ Q+ V + +
Sbjct: 26 TPETIDLFRDLILSYFRAHGRDLPWRHTTDPYRILVSEIMLQQTQVERVVVRYREFLDRF 85
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + +G R+ + + ++ E+ +P +E L PGIG
Sbjct: 86 PDFASLARAPRSEVLLAWQGMGYNRRAIA-LQETARRVVEEYSGDLPADVETLATFPGIG 144
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAH 195
A+ I + AF +P + V+T+I RI G +++ + R + ++ +
Sbjct: 145 NATASAICAYAFNLPVVYVETNIRRIFIHFFFQDREGVRDDEILPLVERTLYRENPREWY 204
Query: 196 YWLVLHG 202
L+ +G
Sbjct: 205 SSLMDYG 211
>gi|189424051|ref|YP_001951228.1| HhH-GPD family protein [Geobacter lovleyi SZ]
gi|189420310|gb|ACD94708.1| HhH-GPD family protein [Geobacter lovleyi SZ]
Length = 298
Score = 59.9 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 4/176 (2%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
P E + + ++V+ ++ Q+ V + PQ + ++ + +
Sbjct: 49 PWREGTAPDPYRVLVSEVMLQQTQVDRVIPRFTAFVQQFPDPQSLAGASTPQVLAAWQGL 108
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
G R+ N+ + ++++ + ++P+ L +LPGIG A + + AF P + ++T
Sbjct: 109 GYNRRAL-NLQRAARMIVDLWGGRVPEDPVLLQQLPGIGPYTAGAVAAFAFNRPQVFLET 167
Query: 159 HIFRISNRIGLAP--GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+I + A G T ++ + ++ + L+ +G + K R P
Sbjct: 168 NIRAVLLHFFFADQEGITDKQLLPVVEAVLDRAEPRTWYNALMDYGSDL-KRRFPN 222
>gi|283850890|ref|ZP_06368176.1| HhH-GPD family protein [Desulfovibrio sp. FW1012B]
gi|283573813|gb|EFC21787.1| HhH-GPD family protein [Desulfovibrio sp. FW1012B]
Length = 216
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 12/195 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRT 97
P + F + V +L+ + NV +A +L + + +LA+ ++L IR
Sbjct: 20 PGRWWPDASPFEIAVGSILTQNVSWENVERAMANLKAGGEFTAEALLALPVEELARLIRP 79
Query: 98 IGIYRKKSENIISLSHILINE--------FDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ ++ K+ + +L +++++ + + L + G+G + A+ IL A
Sbjct: 80 VRYFQVKAARLRNLLALIVHDLGGDLTALARMDLETARQTLLAVRGVGPETADKILLFAL 139
Query: 150 GIPTIGVDTHI-FRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
G+P+ VD + LA +V + + +P H L G C
Sbjct: 140 GLPSFVVDAYTVRVCGRHALLAEDAGYGEVREMFMDALPEDPALFAEYHELLARVGNAWC 199
Query: 207 KARKPQCQSCIISNL 221
K + P+C +C ++
Sbjct: 200 KPKAPRCATCPLAAF 214
>gi|297723055|ref|NP_001173891.1| Os04g0358000 [Oryza sativa Japonica Group]
gi|255675367|dbj|BAH92619.1| Os04g0358000 [Oryza sativa Japonica Group]
Length = 1310
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++Y H ++ G+ +C+ KP C +C ++ CK K
Sbjct: 602 NRYELHCQMITFGKAICRKSKPNCGACPFTSECKYYK 638
>gi|320534534|ref|ZP_08034991.1| base excision DNA repair protein, HhH-GPD family [Actinomyces sp.
oral taxon 171 str. F0337]
gi|320133267|gb|EFW25758.1| base excision DNA repair protein, HhH-GPD family [Actinomyces sp.
oral taxon 171 str. F0337]
Length = 179
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
+ +P L + F L+VA +LSAQ+TD VN T LF +
Sbjct: 65 RAGAVDDELMALYPDAACALDHDGPFQLLVATVLSAQTTDARVNTVTPELFGRYPDAAAL 124
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
A + L+ +R +G R K+ +++ + L F+ ++P++ E L LPG GR
Sbjct: 125 GAARREDLEAILRPLGFQRAKAGHLLGIGQALTERFEGRVPRSREELVALPGGGR 179
>gi|39968419|ref|XP_365600.1| hypothetical protein MGG_02302 [Magnaporthe oryzae 70-15]
gi|145014129|gb|EDJ98770.1| hypothetical protein MGG_02302 [Magnaporthe oryzae 70-15]
Length = 375
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 85/239 (35%), Gaps = 31/239 (12%)
Query: 8 DSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGEL-----------YYVNHFTLIVAVL 56
++ +P C K I P L + +V +
Sbjct: 113 PNFPHPTPAEC----KRAHRILAKLHGARKRPTVPLTAGPAGRAGCGDAPSVLDALVRTI 168
Query: 57 LSAQSTDVNVNKATKHLFE----IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
LS ++D N +A + + D ++A G KL+ IR G+ KS I+S+
Sbjct: 169 LSQNTSDSNSARAKRSMDRAYGGRHDNWPAVVAGGVGKLEEAIRCGGLSVVKSRVIMSIL 228
Query: 113 HILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ + + + G+G K A+ +L G + VDTH+ R+
Sbjct: 229 ETCAQRYGSYSLDHLREASDEEAMREMLAFKGVGPKTASCVLLFCLGRESFAVDTHVHRL 288
Query: 164 SNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKARKPQCQSCIIS 219
+ +G G + + L IP + +Y H L+ HG+ CKA C +
Sbjct: 289 TGMLGWRPAGTSREEAHLHLDARIPDEDKYGLHVLLITHGKRCAECKAGGKSSGKCELR 347
>gi|254674023|emb|CBA09807.1| endonuclease III [Neisseria meningitidis alpha275]
Length = 71
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+EIF F P P EL + + F L++AVLLSAQ+TDV VNKAT LF +ADTPQ ML
Sbjct: 7 QEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKATAKLFPVADTPQAMLD 66
Query: 86 IGE 88
Sbjct: 67 WVW 69
>gi|217967235|ref|YP_002352741.1| HhH-GPD family protein [Dictyoglomus turgidum DSM 6724]
gi|217336334|gb|ACK42127.1| HhH-GPD family protein [Dictyoglomus turgidum DSM 6724]
Length = 223
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKM 83
+E+IF + K+ P+ F +I+ +L+ + NV KA ++L E P K+
Sbjct: 4 IEDIFKVLFDKYG-PQYWWPADTPFEVIIGAILTQATNWRNVEKAIRNLKEENLLDPFKL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD--------NKIPQTLEGLTRLPG 135
++ E+KL I+ +G Y+ K++ + + + + E+ N + E L ++ G
Sbjct: 63 YSLNEEKLSVLIKPVGFYKIKAQRLKNFINYFVKEYHGDLLAMNRNPTRELREELLKIKG 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS--LLRIIPP-KHQY 192
+G++ + IL F P +D + RI + +G+ P + Q + P +
Sbjct: 123 LGKETVDSILLYVFNRPVFVIDNYTKRIFSCLGIGSFDLPYEDWQKIFHNSLFPIYQLFQ 182
Query: 193 NAHYWLVLHGRYVCKARKPQCQS-CIISNL 221
H +V HG+ CK +C + C +
Sbjct: 183 EYHALIVEHGKRSCK----KCPNHCFLRRY 208
>gi|207110359|ref|ZP_03244521.1| endonuclease III (nth) [Helicobacter pylori HPKX_438_CA4C1]
Length = 55
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ L + + H+ L+L GRY CKA+ P C +C + C
Sbjct: 5 KEELSDLFKDNLSKLHHALILFGRYTCKAKNPLCGACFLKEFC 47
>gi|195953346|ref|YP_002121636.1| HhH-GPD family protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932958|gb|ACG57658.1| HhH-GPD family protein [Hydrogenobaculum sp. Y04AAS1]
Length = 213
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 27 EIFYLFSLKWP---SPKGELYYVNHF------TLIVAVLLSAQSTDVNVNKATKHLFEIA 77
E++ +F + ++ Y + +I+ +L+ + NV KA ++L
Sbjct: 5 ELYNIFLDSYGYQNWWPVDIDYHKTYNTDPKDEIIIGAILTQNTNWKNVEKALENLKNYK 64
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
K + + +L + + ++ NI+ + + + T E L + GIG
Sbjct: 65 LLSLKAIKHVDIELLKELIRPSGFFQRKANILK------DVSNIEFELTREILLNIKGIG 118
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH--QYNAH 195
++ A+ IL A+ P +D + RI R+ K ++ + IP H
Sbjct: 119 KETADSILLYAYNKPYFVIDMYTKRIIKRLFGLTFKEYDEYADFITSNIPKDIDIYKEYH 178
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
+V H + C+ + P C CI+ N C
Sbjct: 179 ALIVEHAKRYCQ-KTPNCDECILRNAC 204
>gi|326510413|dbj|BAJ87423.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR-IKQ 227
P + SL + +P + LV G+ +C +P+C SC I+ +C K+
Sbjct: 69 PEQTRMSLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCGSCGINTICPSAFKE 122
>gi|312073211|ref|XP_003139418.1| hypothetical protein LOAG_03833 [Loa loa]
gi|307765421|gb|EFO24655.1| hypothetical protein LOAG_03833 [Loa loa]
Length = 130
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISN 165
I ++ IL +D IP T+E L LPG+G K A + + A+ VDTH+ RISN
Sbjct: 5 YIKKVAKILKERYDGDIPNTIEELCSLPGVGEKMAYLAMCNAWDQMKGLGVDTHVHRISN 64
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
R+G P + +L ++P + + LV G+ C P+C C+ N+C
Sbjct: 65 RLGWIKTSNPKESRIALEALVPREEWQELNKLLVGFGQQTCLPVLPKCSECLNRNIC 121
>gi|225023249|ref|ZP_03712441.1| hypothetical protein EIKCOROL_00101 [Eikenella corrodens ATCC
23834]
gi|224943894|gb|EEG25103.1| hypothetical protein EIKCOROL_00101 [Eikenella corrodens ATCC
23834]
Length = 244
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+++F + P T +GL L G+GR A I + AFG +D ++ R+ R+ G
Sbjct: 1 MHDFGGRFPDTRQGLETLKGVGRSTAAAIAAFAFGRREAILDGNVKRVLCRVFAQDGAIG 60
Query: 176 NK-----VEQSLLRIIPP-KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+K + ++P + L+ G VCK KP C +C ++ +C +Q
Sbjct: 61 DKKFETVLWDLAESLLPAAEDMTPYTQGLMDLGAMVCKRSKPHCYACPMAEICLAKQQ 118
>gi|51245760|ref|YP_065644.1| endonuclease III [Desulfotalea psychrophila LSv54]
gi|50876797|emb|CAG36637.1| probable endonuclease III [Desulfotalea psychrophila LSv54]
Length = 206
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRT 97
P+ + F +IV +L+ ++ NV KA +L L +K L I+
Sbjct: 7 PQQWWPAKSPFEIIVGAVLTQGTSWKNVEKALANLEFAHLLNYDALLALPEKALAELIKP 66
Query: 98 IGIYRKKSENIISLSHILINEFDNKIP--------QTLEGLTRLPGIGRKGANVILSMAF 149
G + K+ + +L ++ + KI Q + L ++ G+G + A+ IL A
Sbjct: 67 AGFFNVKAARLGNLLVMIAENYGGKIDALLADELGQARQALLKVRGVGEETADAILLYAA 126
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKV-EQSLLRIIPPKHQ--YNAHYWLVLHGRYVC 206
G P +D++ RI +R + +T + +++ + I + H +V+ + C
Sbjct: 127 GKPIFVIDSYTHRIFSRHNMVDEETDYQTMQKTFMANIEEEASIFNEYHALIVMTAKKFC 186
Query: 207 KARKPQCQSCII 218
K KP C +C +
Sbjct: 187 KKNKPLCPNCPL 198
>gi|242065150|ref|XP_002453864.1| hypothetical protein SORBIDRAFT_04g019820 [Sorghum bicolor]
gi|241933695|gb|EES06840.1| hypothetical protein SORBIDRAFT_04g019820 [Sorghum bicolor]
Length = 1891
Score = 59.2 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+ + + L + G+G K + + VDT++ RI R+G P + E
Sbjct: 1445 QPDKAKDFLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLP--ESL 1502
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L ++ Y HY ++ G+ C KP C SC + CK
Sbjct: 1503 QLHLL---EMYELHYQMITFGKVFCTKSKPNCNSCPMRAECKHF 1543
>gi|50313205|gb|AAT74550.1| adenine glycosylase [Helicobacter pylori]
gi|50313207|gb|AAT74551.1| adenine glycosylase [Helicobacter pylori]
Length = 156
Score = 59.2 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 59 AQSTDVNVNKATK-HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
Q+ V + E T + + +++ R +G Y +++N+ + I +
Sbjct: 1 QQTQINTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVK 59
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPN 176
E ++++P + L +LPGIG AN IL F + VD +I R+ GL P
Sbjct: 60 EHNSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAK 119
Query: 177 KVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
++ + P +N + L+ G +C KP+C
Sbjct: 120 DLQIKANDFLNPNESFNHNQALIDLGALICSP-KPKC 155
>gi|206900687|ref|YP_002250561.1| HhH-GPD [Dictyoglomus thermophilum H-6-12]
gi|206739790|gb|ACI18848.1| HhH-GPD [Dictyoglomus thermophilum H-6-12]
Length = 223
Score = 59.2 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 18/210 (8%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKM 83
+E+IF L ++ P+ F +IV +L+ + NV KA K+L E P K+
Sbjct: 4 IEDIFKLLFDRYG-PQYWWPADTPFEVIVGAILTQATNWRNVEKAIKNLKEEHLLDPFKL 62
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHIL--------INEFDNKIPQTLEGLTRLPG 135
++ E+KL IR +G Y+ K++ + + I+ + E L ++ G
Sbjct: 63 YSLDEEKLSILIRPVGFYKIKAKRLKNFLKYFVEKYKGDLISMNKKSTKELREELLKING 122
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK--TPNKVEQSLLRIIPP-KHQY 192
+G++ + IL F P +D + +I + + E + P +
Sbjct: 123 LGKETVDSILLYVFNRPLFVIDNYTKKIFTCLEIGKLNLSYNEWQEIFHKSLFPIYQLFQ 182
Query: 193 NAHYWLVLHGRYVCKARKPQC-QSCIISNL 221
H +V HG+ CK+ C +C + N
Sbjct: 183 EYHALIVEHGKRECKS----CSNNCFLKNF 208
>gi|300742474|ref|ZP_07072495.1| LOW QUALITY PROTEIN: A/G-specific adenine glycosylase [Rothia
dentocariosa M567]
gi|300381659|gb|EFJ78221.1| LOW QUALITY PROTEIN: A/G-specific adenine glycosylase [Rothia
dentocariosa M567]
Length = 310
Score = 59.2 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
+ + + D ++P + L LPG+G A I AFG +DT+I R+ R
Sbjct: 91 RLHGAAVAMTKHHDGEVPADYDELLELPGVGAYTAAAITVFAFGRRATVIDTNIRRVHAR 150
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQYN------AHYWLVLHGRYVCKARKPQCQSCIISN 220
+ + + + N + ++ G VC A+ P+C+ C + +
Sbjct: 151 AVMGKALPHKYLNTAETTLAEELMPQNTAVSCVWNASVMELGALVCVAKNPRCEQCPLED 210
Query: 221 LCKRIK 226
+C +K
Sbjct: 211 ICAWVK 216
>gi|38346441|emb|CAE04435.2| OSJNBa0018J19.2 [Oryza sativa Japonica Group]
gi|116309571|emb|CAH66631.1| OSIGBa0105P02.5 [Oryza sativa Indica Group]
Length = 798
Score = 59.2 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++Y H ++ G+ +C+ KP C +C ++ CK K
Sbjct: 602 NRYELHCQMITFGKAICRKSKPNCGACPFTSECKYYK 638
>gi|312128249|ref|YP_003993123.1| hhh-gpd family protein [Caldicellulosiruptor hydrothermalis 108]
gi|311778268|gb|ADQ07754.1| HhH-GPD family protein [Caldicellulosiruptor hydrothermalis 108]
Length = 235
Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAI 86
I+ W P+ F +++ +L+ + +V KA +L + + +L
Sbjct: 21 IYNKLYEFWG-PQHWWPAETKFEMVIGAILAQNISWNSVEKAICNLKRANILSIEGILQT 79
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL--------EGLTRLPGIGR 138
++KL I+ G Y +K++ + + L EF++ + + + L GIG
Sbjct: 80 SDEKLSELIKPAGYYNQKAKRLKEFCNFLKREFNSDLEKLFALDISSLRQVLLSQKGIGF 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT--PNKVEQSLLRIIPPKHQ--YNA 194
+ A+ I+ P VD++ R+ R+GL + ++ +++ +
Sbjct: 140 ETADSIILYGAEKPIFVVDSYTKRLFYRLGLIESEKAKYEDIQNLVMQNLELDTYIFNEF 199
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
H +V H + CK++KP C++C +S C +
Sbjct: 200 HALIVKHCKERCKSKKPMCKNCCLSAFCIYL 230
>gi|31296708|gb|AAP46637.1| PG3 [Hordeum vulgare]
Length = 689
Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
I + Y H ++ G+ +C P C +C C+ K
Sbjct: 409 IDKEKLYELHCLMITFGKVICTKVDPNCNACPFRGDCRYYK 449
>gi|225436345|ref|XP_002270885.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1369
Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA---------------PGK 173
L + G+G K + + VDT++ RI+ R+G
Sbjct: 903 YLLSIRGLGLKSVECVRLLTLHHHAFPVDTNVGRITVRLGWVPLQPLPSDVYLHSLDQYP 962
Query: 174 TPNKVEQSLLRII---PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ +++ L + K Y HY ++ G+ C + P C +C + CK
Sbjct: 963 PMDTIQKYLWPRLCTLDQKTLYELHYQMITFGKVFCTKKNPYCDACPLRGDCKHY 1017
>gi|56808632|ref|ZP_00366359.1| COG1194: A/G-specific DNA glycosylase [Streptococcus pyogenes M49
591]
Length = 325
Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 6/153 (3%)
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
E + + E++L +G Y + N+ + ++ +F P T + +
Sbjct: 8 RFLEWFPQIKDLADAPEEQLLKAWEGLGYYS-RVRNMQKAAQQVMVDFGGIFPHTYDDIA 66
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRII 186
L GIG A I S++F +P VD ++ R+ + K + + +I
Sbjct: 67 SLKGIGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILI 126
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
P + + L+ G + A+ P+ I
Sbjct: 127 DPDRPGDFNQALMDLGTDIESAKTPRPDESPIR 159
>gi|167951083|ref|ZP_02538157.1| A/G-specific adenine glycosylase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 126
Score = 59.2 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 23/68 (33%)
Query: 160 IFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
++ + ++ P + + ++ G +C P+C C +
Sbjct: 3 ARHFMVEGWPGRSAVAKRLWELTRQLTPQQEAAAYNQGMMDLGATICTRGIPRCDLCPLG 62
Query: 220 NLCKRIKQ 227
+ C+ +Q
Sbjct: 63 DSCQAREQ 70
>gi|256830633|ref|YP_003159361.1| HhH-GPD family protein [Desulfomicrobium baculatum DSM 4028]
gi|256579809|gb|ACU90945.1| HhH-GPD family protein [Desulfomicrobium baculatum DSM 4028]
Length = 232
Score = 58.8 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRT 97
P F + + +L+ + NV KA L E P+ + + +++L +IR
Sbjct: 20 PSRWWPGRTPFEIALGAILTQNTAWTNVEKAMHALRESGLLDPRALARLTDEELATFIRP 79
Query: 98 IGIYRKKSENIISLSHILINEFDNKIP--------QTLEGLTRLPGIGRKGANVILSMAF 149
G +R K+ + + L D + L + GIG + A+ IL A
Sbjct: 80 AGAFRVKAARVRNFLLFLHRTCDLDMDGLRGETVETLRPALLEVSGIGPETADSILLYAL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPN-KVEQSLLRIIPPK--HQYNAHYWLVLHGRYVC 206
G+P+ VD + RI NR GL P ++ + + ++PP H +V G+ C
Sbjct: 140 GLPSFVVDAYTRRILNRHGLVPEDIAYGELREFFMDVLPPDPALYNEYHALIVRTGKNWC 199
Query: 207 KARKPQCQSCIIS 219
R+ +C C ++
Sbjct: 200 AKRQGKCPDCPLA 212
>gi|262172448|ref|ZP_06040126.1| A/G-specific adenine glycosylase [Vibrio mimicus MB-451]
gi|261893524|gb|EEY39510.1| A/G-specific adenine glycosylase [Vibrio mimicus MB-451]
Length = 231
Score = 58.8 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLR----IIPPKHQYNAHYWLVLHGR 203
+ P +D ++ R R G K VE L P + ++ G
Sbjct: 6 YKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGA 65
Query: 204 YVCKARKPQCQSCIISNLCKRIKQ 227
+C KP+C C + + C +Q
Sbjct: 66 MICTRSKPKCSLCPVESFCLAKQQ 89
>gi|291229796|ref|XP_002734857.1| PREDICTED: mutY homolog [Saccoglossus kowalevskii]
Length = 195
Score = 58.8 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 10/156 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ + + K EL + + + V+ ++ Q+ V
Sbjct: 38 ITSMRKSLLQWYDENKRELPWRKLSQLEDANKRSYAIWVSEIMLQQTQVATVIDYYNKWM 97
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
+ T Q + +++ +G Y + ++ + L LP
Sbjct: 98 QKWPTLQDLAKAKLEEVNEMWSGLGYYSRGRRLHEGAQKVVNELNGEMPSTADQLLQLLP 157
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
G+GR + I S+AF T VD ++ R+ R+
Sbjct: 158 GVGRYTSAAIASIAFNEVTGVVDGNVIRVLARMRAI 193
>gi|213583115|ref|ZP_03364941.1| endonuclease III [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 53
Score = 58.4 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ EI P P EL + + F L++AVLLSAQ+TDV+VNK
Sbjct: 1 MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNK 49
>gi|115446223|ref|NP_001046891.1| Os02g0496500 [Oryza sativa Japonica Group]
gi|48716417|dbj|BAD23025.1| transcriptional activator-like [Oryza sativa Japonica Group]
gi|48716542|dbj|BAD23146.1| transcriptional activator-like [Oryza sativa Japonica Group]
gi|113536422|dbj|BAF08805.1| Os02g0496500 [Oryza sativa Japonica Group]
Length = 1207
Score = 58.4 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
I + Y H ++ G+ +C P C++C S CK
Sbjct: 835 ISKEKLYELHCLMITFGKAICTKVSPNCRACPFSAKCKYY 874
>gi|94987566|ref|YP_595499.1| endonuclease III, putative [Lawsonia intracellularis PHE/MN1-00]
gi|94731815|emb|CAJ55178.1| endonuclease III, putative [Lawsonia intracellularis PHE/MN1-00]
Length = 226
Score = 58.0 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 17/212 (8%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE--IADTPQKML 84
EI+ K G +I+ +L+ + NV KA +L + K+L
Sbjct: 13 EIYEKLLNKL-QASGWWPAETTLEVIIGAILTQNTVWTNVEKALCNLRNAGVLHDGNKIL 71
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI--------PQTLEGLTRLPGI 136
+ + +L N I+ G + K++ + ++ + + L + G+
Sbjct: 72 TLTDSELSNLIKPAGFFNIKTKRLKAILQFFASSCSFSFEKLKDISLQHLRKKLLLVHGV 131
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQ--YN 193
G + A+ IL A P+ VD++ RI +R L + + L +P Q
Sbjct: 132 GPETADSILLYALNKPSFVVDSYTKRILSRHKLIQPTASYEDIRSLFLENLPCHLQLFNE 191
Query: 194 AHYWLVLHGRYVCKARKPQCQSCI---ISNLC 222
H +V ++ C + P C C ++++C
Sbjct: 192 YHALIVRTCKHWCHKKTPLCSQCPLFELNDIC 223
>gi|168067245|ref|XP_001785533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662839|gb|EDQ49643.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1894
Score = 58.0 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 69/191 (36%), Gaps = 23/191 (12%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + A +++ Q+ + L E + ++ + I+ G + +
Sbjct: 1215 KDKWEPLRARIVAEQTYSRDT------LTEDCVDWNAVQQASVHEVADVIKNRGQHNALA 1268
Query: 106 ENIISLSHILINEFDNKIPQTLE----------GLTRLPGIGRKGANVILSMAFGIPTIG 155
+ + + + + I L G+G K I + P+
Sbjct: 1269 GRLKAFLDRVHRDQNGVIDLEWIRKLPPEDAKAFLLSFRGVGLKSVECIRLLCLHHPSFP 1328
Query: 156 VDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
VDT++ RI+ R+G P P + + LL + + ++ G+ C KP C
Sbjct: 1329 VDTNVGRIAVRLGWVPLEPLPEETQLHLLELYELHYH------MITFGKVFCTKSKPNCN 1382
Query: 215 SCIISNLCKRI 225
+C + + CK
Sbjct: 1383 ACPLRSECKHY 1393
>gi|332711343|ref|ZP_08431275.1| A/G-specific DNA glycosylase [Lyngbya majuscula 3L]
gi|332349892|gb|EGJ29500.1| A/G-specific DNA glycosylase [Lyngbya majuscula 3L]
Length = 166
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 7/166 (4%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ +L + +++ V+ ++ Q+ V E T + + + ++
Sbjct: 2 DWYARAGRDLPWRRSWEPYSIWVSEIMLQQTQVKTVIPYYHRWMEQFPTLEHLASADLQQ 61
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G Y ++ N+ + + +++ PQ L + L GIGR A ILS AF
Sbjct: 62 VLKAWEGLGYYS-RARNLHACAKVIMQSHGGVFPQQLSQVLALSGIGRTTAGGILSAAFN 120
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR---IIPPKHQYN 193
P +D ++ R+ R+ +Q R ++ +H
Sbjct: 121 QPVAILDGNVKRVLARLVALSIPPAKATQQLWKRSEALLDHQHPRE 166
>gi|164428359|ref|XP_001728449.1| hypothetical protein NCU11219 [Neurospora crassa OR74A]
gi|157072115|gb|EDO65358.1| predicted protein [Neurospora crassa OR74A]
Length = 593
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 189 KHQYNAHYWLVLHGRYVCK--ARKPQCQSCIISNLCKRIKQ 227
L+ G VC + P C C I C+ +
Sbjct: 339 DRPGRWGQALMELGAAVCLAAPKTPLCHLCPIQATCRAYAE 379
>gi|309807278|ref|ZP_07701248.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
iners LactinV 03V1-b]
gi|308166338|gb|EFO68547.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
iners LactinV 03V1-b]
Length = 117
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
E +I Y +P KGEL + F L+ AVL+SAQ+TD VNK T LF+ + +
Sbjct: 11 EARQILYKIISLFPDAKGELKWGTPFQLLCAVLMSAQTTDKMVNKVTPILFKKFPNSKSL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
A ++ IR IG+YR K++++ + + ++ N++ +P+ +
Sbjct: 71 AAANISDIEACIRNIGLYRTKAKHLKATATLIENKYQGIVPKIKKHY 117
>gi|210613490|ref|ZP_03289730.1| hypothetical protein CLONEX_01937 [Clostridium nexile DSM 1787]
gi|210151149|gb|EEA82157.1| hypothetical protein CLONEX_01937 [Clostridium nexile DSM 1787]
Length = 62
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + E+ ++P L Y + L+V V L+AQ TD VN L+E
Sbjct: 1 MRKKELALEVIERLKKEYPDADCTLDYDEAWKLLVGVRLAAQCTDERVNIVVGKLYEKYP 60
Query: 79 T 79
Sbjct: 61 D 61
>gi|218187756|gb|EEC70183.1| hypothetical protein OsI_00912 [Oryza sativa Indica Group]
Length = 1952
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK------------TPN 176
L + G+G K + + VDT++ RI R+G P +
Sbjct: 1487 YLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLPESLQLHLLEMYP 1546
Query: 177 KVEQSLLRIIPP------KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+E + P + Y HY ++ G+ C KP C +C + CK
Sbjct: 1547 MLENIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRAECKHF 1601
>gi|50289277|ref|XP_447069.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526378|emb|CAG60002.1| unnamed protein product [Candida glabrata]
Length = 468
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
++V V+LSAQ+ D ++ + K L I ++G
Sbjct: 172 QVLVGVMLSAQTKDEVTAMGMYNIMKYCIEELKDAQGITLDALLRIDEQVLDELIHSVGF 231
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTH 159
+++K+ I + IL ++D +P + + LPG+G K + L A+G I VD H
Sbjct: 232 HKRKANFIKRTAAILNEKYDQDVPDNVTDILGLPGVGPKMGYLTLQKAWGKIEGICVDVH 291
Query: 160 IFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
+ R+ PN + L + +PP+ + LV G+ + K+R
Sbjct: 292 VDRLCKMWKWVDPDKCKTPNDTRKQLQKWLPPRLWTEINGLLVGFGQVIGKSR 344
>gi|328952062|ref|YP_004369396.1| HhH-GPD family protein [Desulfobacca acetoxidans DSM 11109]
gi|328452386|gb|AEB08215.1| HhH-GPD family protein [Desulfobacca acetoxidans DSM 11109]
Length = 291
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 34 LKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
+ L + + + ++V+ ++ Q+ V + + + ++
Sbjct: 34 QYYQEHGRVLPWRRTSDPYHILVSEIMLQQTQVERVLTKYELFLARFPNFEDLSRTSLRE 93
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G ++++ + +++ ++ EFD ++P L LPGIG A +L+ AF
Sbjct: 94 ILKVWQGLGY-NRRAKALQAIARQVVAEFDGRLPADRHLLQTLPGIGPATAGAVLAFAFE 152
Query: 151 IPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRI-IPPKHQYNAHYWLVLHGR 203
P I ++T+I R+ + A KTP+K+ L+ + + + + +Y L+ +G
Sbjct: 153 QPVIFLETNIRRVFLHFFYPAEDKTPDKMLLPLIILTLDSQRVRHWYYALMDYGA 207
>gi|145638443|ref|ZP_01794053.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittII]
gi|145272772|gb|EDK12679.1| A/G-specific adenine glycosylase [Haemophilus influenzae PittII]
Length = 197
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ + ++ G VC KP+C C ++ C K
Sbjct: 3 DFNQAMMDIGAMVCTRTKPKCDLCPLNIDCLAYK 36
>gi|193082832|emb|CAQ58412.1| putative transcriptional activator DEMETER [Hordeum vulgare subsp.
vulgare]
Length = 1981
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKV 178
+ E L + G+G K + + VDT++ RI R+G P P +
Sbjct: 1509 HVDPDKAKEYLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLPESL 1568
Query: 179 EQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ LL + P Y HY ++ G+ C KP C +C +
Sbjct: 1569 QLHLLELYPMLENIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRAE 1628
Query: 222 CKRI 225
CK
Sbjct: 1629 CKHF 1632
>gi|3980220|emb|CAA10322.1| putative adenine glycosylase [Streptomyces coelicolor A3(2)]
Length = 183
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV----EQSLLR 184
L LPGIG A + S A+G +DT++ R+ R PN +
Sbjct: 1 QLLALPGIGEYTAAAVASFAYGQRHAVLDTNVRRVLARAVTGVQYPPNATTAAERKLARA 60
Query: 185 IIPPK--HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
++P + + G VC A+K C C I+ C
Sbjct: 61 LLPEEQERAARWAAASMELGALVCTAKKESCHRCPIAAQC 100
>gi|242085358|ref|XP_002443104.1| hypothetical protein SORBIDRAFT_08g008620 [Sorghum bicolor]
gi|241943797|gb|EES16942.1| hypothetical protein SORBIDRAFT_08g008620 [Sorghum bicolor]
Length = 1856
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
+ + + L + G+G K + + VDT++ RI R+G P + E
Sbjct: 1409 QPDKAKDFLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLP--ESL 1466
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
L ++ Y HY ++ G+ C KP C SC + CK
Sbjct: 1467 QLHLL---EMYELHYQMITFGKVFCTKSKPNCNSCPMRVECKHF 1507
>gi|15921690|ref|NP_377359.1| endonuclease III [Sulfolobus tokodaii str. 7]
gi|15622477|dbj|BAB66468.1| 224aa long hypothetical endonuclease III [Sulfolobus tokodaii str.
7]
Length = 224
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 14/216 (6%)
Query: 26 EEIFYLFSLKWP-SPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
+E+ S + PK + Y + F VA +LS STD A +L
Sbjct: 5 KELLNKLSNVYSIDPKDFVAYYVCKNTSDVFKTFVATILSQNSTDKATYVAYNNLENKIG 64
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG-----LTR 132
T K+L+I E +L+ I+ +G+ K+ I +++ +++ +
Sbjct: 65 VTVDKILSISEDELKEVIKIVGLSNSKARYIKNIALFFKRNKIDELTRLPCDKLRELFLT 124
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG-LAPGKTPNKVEQSLLRIIPPKHQ 191
+ GIG K A+V+L F VDTHI R+ +R+G L ++ + +
Sbjct: 125 VDGIGEKTADVVLVNCFKCKFFPVDTHIKRVMSRLGILGSKPQYKEIADFFISSLNEDEL 184
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H L+LHGR C A+KP C C+I+ C+ +
Sbjct: 185 LELHQLLILHGRKTCTAKKPLCDKCVINYCCEYFSR 220
>gi|317472162|ref|ZP_07931494.1| hypothetical protein HMPREF1011_01844 [Anaerostipes sp. 3_2_56FAA]
gi|316900566|gb|EFV22548.1| hypothetical protein HMPREF1011_01844 [Anaerostipes sp. 3_2_56FAA]
Length = 179
Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIKQ 227
+P + + + L+ G VC P+C C +C ++
Sbjct: 1 MPDQRAGDFNQALIELGAIVCVPNGEPKCCECPWDTVCTAYRE 43
>gi|20094798|ref|NP_614645.1| A/G-specific DNA glycosylase [Methanopyrus kandleri AV19]
gi|19888007|gb|AAM02575.1| A/G-specific DNA glycosylase [Methanopyrus kandleri AV19]
Length = 206
Score = 57.2 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 16 LGCLYTPKEL-EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ L + E + + +++ +A +L ++ + L
Sbjct: 1 MATLLEAPRIVERWLRGMEERGEYEPAWGDREDVYSVALAGVLHQRTRRELAEPVLRELL 60
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
P +L E +L+ + IG+ ++ + ++ L+ +L + + E L +P
Sbjct: 61 RRYPEPSDLLKAPEDELKESLARIGLVERRLKAVLGLARLLSED----PEPSGEDLLSVP 116
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G+G A+++ ++ + + VD ++ R+ R + G+ V +R + +
Sbjct: 117 GVGPYTADLVRAVVYRERVLPVDANVRRVVRR---STGRPVGDVGAEWVRA--ARDPRDL 171
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLC 222
V GR C+ +P+C+ C I+ +C
Sbjct: 172 ALGTVELGRRCCRP-EPECEECPIAGVC 198
>gi|16081455|ref|NP_393801.1| hypothetical protein Ta0321 [Thermoplasma acidophilum DSM 1728]
gi|10639464|emb|CAC11466.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 220
Score = 57.2 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 12/205 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAI 86
++ + + +++ +L+ ++ NV KA + L E ++ +
Sbjct: 7 VYDDLFRVYGDLH-WWPADSKDEVVIGAVLTQNTSWKNVEKAIERLREKGLNSLAAISKC 65
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEF-----DNKIPQTLEGLTRLPGIGRKGA 141
K L IR G Y +K+E +I+LS L+ F + + + + + GIG++
Sbjct: 66 DVKDLAETIRPSGFYNQKAERLIALSKALMERFGGIDSIHDLETAVSFFSPIKGIGQETL 125
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVL 200
+ IL A +P +D + R +R G K VE + + + N H +V
Sbjct: 126 DSILLYALDLPVFVMDKYTARFLDRCYGIRGGDIKKDVEGEIKDV---ERLKNLHAMIVQ 182
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
+ CK + P+C C ++ C+
Sbjct: 183 ISKDHCK-KVPECDGCPLNTKCEYY 206
>gi|291546576|emb|CBL19684.1| hypothetical protein CK1_15780 [Ruminococcus sp. SR1/5]
Length = 57
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR-KPQCQSCIISNLCKR 224
P KVE +L +IIPP+ + + LV HGR VC AR KP C C ++++C++
Sbjct: 4 PKKVEMALWKIIPPEEGNDLCHRLVNHGREVCTARTKPYCDRCCLNDICEK 54
>gi|317472163|ref|ZP_07931495.1| A/G-specific adenine glycosylase [Anaerostipes sp. 3_2_56FAA]
gi|316900567|gb|EFV22549.1| A/G-specific adenine glycosylase [Anaerostipes sp. 3_2_56FAA]
Length = 183
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 26 EEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+EI + L + N + + V+ ++ Q+ V E +
Sbjct: 5 KEIGEALLFWYDHNARILPWRADKNPYRIWVSEIMLQQTRVEAVKPYFDRFMEELPEVKD 64
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ + E+KL +G Y ++ N+ + + ++ E+D K+P + L L GIG A
Sbjct: 65 LAEVDEEKLMKLWEGLGYYN-RARNLKAAAQTIVKEYDGKLPNDYDQLLSLKGIGMYTAG 123
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY 192
I S+A+ I VD ++ R+ R+ G + +++ + +
Sbjct: 124 AIASIAYDIRVPAVDGNVLRVMARLL---GDDSDILKEKTKKRWRKELWR 170
>gi|237725654|ref|ZP_04556135.1| HhH-GPD family protein [Bacteroides sp. D4]
gi|229435462|gb|EEO45539.1| HhH-GPD family protein [Bacteroides dorei 5_1_36/D4]
Length = 213
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 14/204 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I+ + + N +T++V +L ++ +V K + L TP + ++
Sbjct: 7 IYNSLNSAYGPAVWW--SDNAYTVMVEAILVQNTSWSSVEKVMQTL-PQELTPLYISSLS 63
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFD-------NKIPQTLEGLTRLPGIGRKG 140
+ +L++ IR G ++KS II +++ + + L + GIG +
Sbjct: 64 DVELESLIRPCGFAKRKSATIIRVTNWFRQFEYDVEKIKSFETDELRNRLRSIKGIGNET 123
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-HQYNAHYWLV 199
A+VI F P VD + R ++GL ++++ + + +WL+
Sbjct: 124 ADVISVYVFHKPVFIVDAYSRRFLMKLGLNFDTD-EEIKRFFEKSFRKDYRLFGWIHWLI 182
Query: 200 L-HGRYVCKARKPQCQSCIISNLC 222
L HG CK + P C CI N C
Sbjct: 183 LQHGIKHCK-KTPICHDCIFKNKC 205
>gi|295690296|ref|YP_003593989.1| iron-sulfur cluster loop [Caulobacter segnis ATCC 21756]
gi|295432199|gb|ADG11371.1| iron-sulfur cluster loop [Caulobacter segnis ATCC 21756]
Length = 241
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 76/203 (37%), Gaps = 17/203 (8%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
+ + ++ + +V +S ++ D A L + + I +
Sbjct: 25 AQRPVTRMDPISQLVKSSISGRTQDAVSWDAFLRLRAAFKNWDDLADAPVAAVARIIEDV 84
Query: 99 GIYRKKSENIISLSHILINEFDN---------KIPQTLEGLTRLPGIGRKGANVILSMAF 149
K+ + + ++ ++ + Q L LPG+G K A +L+ +
Sbjct: 85 TFPADKARYLTTALRMIRDKVGWLSLSHLKGLTVDQARWELQALPGVGVKVAACVLNFSD 144
Query: 150 GIPTI-GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP----KHQYNAHYWLV--LHG 202
VD+H+ R++ RIGL +L+ + P + H WL+ G
Sbjct: 145 LAMRALVVDSHVDRVAKRIGLVGAGDTTHTYHTLMGLAPDAWTADDLFELH-WLMKRGLG 203
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+ +C P+C +C + +C ++
Sbjct: 204 QMLCPHEGPKCGACPVKAMCAKV 226
>gi|45935143|gb|AAS79601.1| putative endonuclease III protein [Ipomoea trifida]
gi|118562896|dbj|BAF37786.1| hypothetical protein [Ipomoea trifida]
Length = 1687
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 72/221 (32%), Gaps = 28/221 (12%)
Query: 6 KSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVN 65
S S + + + +++ + + +P ++
Sbjct: 1096 SSKSTEKKGKVTKMMPKPDVD--WEELRRTYYNP-------------------NRTPGTL 1134
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
++ + A + I + + N + S L D +
Sbjct: 1135 MDSIDWNAVRCAPVGEIAKVIENRGMNNVLAEKIKAFLDRLVEDHGSIDLEWLKDVPPEK 1194
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLR 184
E L + G+G K + + G VDT+I RI R+G P P ++ LL
Sbjct: 1195 AKEFLLSIRGVGLKSTECVRLLTLGHHAFPVDTNIARIVVRLGWVPLEPLPGDLQIHLL- 1253
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
QY HY L+ G+ +C + P C +C + CK
Sbjct: 1254 -----DQYVLHYQLITFGKVICTKKNPNCNACPMRAECKHF 1289
>gi|213416493|ref|ZP_03349637.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 180
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 7/165 (4%)
Query: 34 LKWPS-PKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + L + + + ++ ++ Q+ V + T +
Sbjct: 12 DWYDKYGRKTLPWQINKTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLD 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + + + PQT + LPG+GR A ILS+A
Sbjct: 72 EVLHLWTGLGYYA-RARNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLAL 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
G +D ++ R+ R G K + + + +A
Sbjct: 131 GKHYPILDGNVKRVLARCYAVSGWPGKK--RGGEYAVDAERASDA 173
>gi|124485940|ref|YP_001030556.1| hypothetical protein Mlab_1120 [Methanocorpusculum labreanum Z]
gi|124363481|gb|ABN07289.1| HhH-GPD family protein [Methanocorpusculum labreanum Z]
Length = 292
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 71/174 (40%), Gaps = 5/174 (2%)
Query: 32 FSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
F E + + + ++V+ ++ Q+ V E + +
Sbjct: 30 FYAAKGRHDMEWRHTSDPYKIVVSEIMLQQTQVPRVAVIFPKFIERFPDFIALAKAEQTD 89
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G R+ N+ L+ +++NE++ +P+ L LPGIG + I + AF
Sbjct: 90 VLAAWQGMGYNRRAL-NLQKLAGVIVNEYNGTVPEDPLVLKNLPGIGPATSCSIAAFAFN 148
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL--RIIPPKHQYNAHYWLVLHG 202
P + ++T+I R+ + + E L ++P ++ ++ L+ G
Sbjct: 149 RPVVFIETNIRRVFIHYFFEDDQVVDDRELLPLVAAMLP-EYSREWYWALMDLG 201
>gi|111657842|ref|ZP_01408557.1| hypothetical protein SpneT_02000965 [Streptococcus pneumoniae
TIGR4]
Length = 314
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
Y + N+ + + ++ +F + P T EG++ L GIG A I S+AF +P VD ++
Sbjct: 18 YYSRVRNMQAAAQQIMTDFGGQFPNTYEGISSLKGIGPYTAGAISSIAFNLPEPAVDGNV 77
Query: 161 FRISNRIGLAPGKT----PNKVEQSLLR-IIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
R+ R+ K+ Q+++ +I P + + L+ G + P+ +
Sbjct: 78 MRVLARLFEVNHDIGIPSNRKIFQAMMEILINPDRPGDFNQALMDLGSDIESPVNPRPEE 137
Query: 216 CIISNLCKRIK 226
+ + +
Sbjct: 138 SPVKDFSAAYQ 148
>gi|242077266|ref|XP_002448569.1| hypothetical protein SORBIDRAFT_06g029335 [Sorghum bicolor]
gi|241939752|gb|EES12897.1| hypothetical protein SORBIDRAFT_06g029335 [Sorghum bicolor]
Length = 901
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
I + Y H ++ G+ VC + P C++C S C
Sbjct: 545 IDKEKLYELHCLMITFGKVVCTKQNPNCRACPFSGSCIYY 584
>gi|16126511|ref|NP_421075.1| endonuclease III family protein [Caulobacter crescentus CB15]
gi|221235291|ref|YP_002517728.1| endonuclease III [Caulobacter crescentus NA1000]
gi|13423785|gb|AAK24243.1| endonuclease III family protein [Caulobacter crescentus CB15]
gi|220964464|gb|ACL95820.1| endonuclease III [Caulobacter crescentus NA1000]
Length = 241
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
P+ + ++ + +V +S ++ D A L + + + ++ I+ +
Sbjct: 25 PQRPVARMDPISQLVKSSISGRTPDAVSWAAFLRLRAEFKSWEDLAEAKTARVAMAIQDV 84
Query: 99 GIYRKKSENIISLSHILINEFDN---------KIPQTLEGLTRLPGIGRKGANVILSMAF 149
K+ +I+ ++ + ++ Q L LPG+G K A +L+ +
Sbjct: 85 TFPEDKARRLITALRMIEEKVGWLSLSHLKTLEVDQARWELQALPGVGVKVAACVLNFSD 144
Query: 150 GIPTI-GVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP----KHQYNAHYWLV--LHG 202
VDTH+ R++ RIGL +L+ + P + H WL+ G
Sbjct: 145 LAMRALVVDTHVDRVARRIGLVGSGDTTNTYHTLMAMAPASWTADDLFELH-WLMKRGLG 203
Query: 203 RYVCKARKPQCQSCIISNLC 222
+ +C A P+C +C + +C
Sbjct: 204 QMLCGAEAPKCGACPVKQMC 223
>gi|163785079|ref|ZP_02179795.1| endonuclease III, putative (nth2) [Hydrogenivirga sp. 128-5-R1-1]
gi|159879652|gb|EDP73440.1| endonuclease III, putative (nth2) [Hydrogenivirga sp. 128-5-R1-1]
Length = 212
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 28 IFYLFSLKWPSPKGELY---YVNHFT-LIVAVLLSAQSTDVNVNKATKHLFEI-ADTPQK 82
I+ K+ + Y + F + + +L+ + NV KA ++L + +K
Sbjct: 5 IYNELLEKYGK-QNWWPLTGYFDPFEEVCIGAVLTQNTNWNNVEKALQNLINEGITSFEK 63
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
+ I E KL I+ G Y +K++ + L + ++N L + GIG++ A+
Sbjct: 64 IQKIPEDKLAVIIKPSGFYNQKAKTLKRLVNFVVNNVK--ENLDRRKLISIKGIGKETAD 121
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPG--KTPNKVEQSLLRIIPPKH--QYNAHYWL 198
IL P VD + R R+G+ ++++ + + +P H +
Sbjct: 122 TILLYGLNKPVFIVDAYTKRFFYRLGIIREEKIEYDQLKNFIEKNLPKNIGIYKEYHALI 181
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
V H + +CK +KP+C +C I C
Sbjct: 182 VEHCKNLCK-KKPECDNCHIKYKC 204
>gi|147805787|emb|CAN69482.1| hypothetical protein VITISV_017352 [Vitis vinifera]
Length = 377
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-A 148
+++ I +G Y +K+ N+ ++ I + ++D IP +LE L LPGIG K A++++++
Sbjct: 219 TIKSLIYPVGFYSRKAANLKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLVMNVAW 278
Query: 149 FGIPTIGVDTHIFRISNRIGLA-------PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ I VDTH+ RI NR+G +P + +SL +P + + L
Sbjct: 279 NNVQGICVDTHVHRICNRLGWVSRRGTKQKTSSPEETRESLQLWLPKEEWVPINPLL--- 335
Query: 202 GRYVCKARKPQCQSCIISNLCKR-IKQ 227
+C +P C C +S+LC K+
Sbjct: 336 --TICTPLRPXCGVCGVSDLCPSAFKE 360
>gi|297734851|emb|CBI17085.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ K Y HY ++ G+ C + P C +C + CK
Sbjct: 534 LDQKTLYELHYQMITFGKVFCTKKNPYCDACPLRGDCKHY 573
>gi|297521259|ref|ZP_06939645.1| endonuclease III [Escherichia coli OP50]
Length = 43
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
+ EI P P EL + + F L++AVLLSAQ
Sbjct: 1 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQ 41
>gi|298675669|ref|YP_003727419.1| HhH-GPD family protein [Methanohalobium evestigatum Z-7303]
gi|298288657|gb|ADI74623.1| HhH-GPD family protein [Methanohalobium evestigatum Z-7303]
Length = 207
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 9/198 (4%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLA 85
+I+ ++ P+ F +IV +L+ Q+ +NV KA +L + +
Sbjct: 2 QIYQHLMDEFG-PQYWWPADTSFEVIVGAILTQQTKWINVEKAISNLKNNYLLDKKALAY 60
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINE-----FDNKIPQTLEGLTRLPGIGRKG 140
+K++ I G YR+K+ + ++++ F+ I + L L GIG +
Sbjct: 61 ADIEKIEELIYCCGFYRQKATRLKNVANYFFENGLDSVFNQDINKLRSTLLSLKGIGEET 120
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVL 200
A+ I+ + P +D + RI +G+ + + H +V
Sbjct: 121 ADSIILYSAEKPKFVIDAYTKRIMGCLGIDGNYKQLQSHFESKLPVDVNLYQEYHALIVE 180
Query: 201 HGRYVCKARKPQCQSCII 218
+ + C + QC +C++
Sbjct: 181 YAKNYCVKK--QCDNCLL 196
>gi|57233603|ref|YP_182307.1| HhH-GPD family DNA repair protein [Dehalococcoides ethenogenes 195]
gi|57224051|gb|AAW39108.1| DNA repair protein, HhH-GPD family [Dehalococcoides ethenogenes
195]
Length = 220
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L +I+ K+ P+ + F ++ +L+ + NV KA L E +
Sbjct: 8 QKLSDIYQCLLDKYG-PQHWWPAESRFEMMTGAVLTQSAAWTNVEKAIARLKEAGLLSPE 66
Query: 83 MLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNK--------IPQTLEGLTRL 133
+ ++ L IR G + K+ + +L+ L+ ++ + + L +
Sbjct: 67 AIMKTDEDTLAEAIRPSGYFNVKTRKLKALAAWLVAGYNGQADKLLPAETDALRQELLGV 126
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQ- 191
GIG + A+ IL A G P +D + RI +R+GLA +++++ +
Sbjct: 127 WGIGEETADSILLYACGKPVFVIDAYTRRIFSRLGLAERDAGYDRLQRLFTANLAADAAV 186
Query: 192 -YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
H +V H + C+ KP CQ C++ +C
Sbjct: 187 FNEYHALVVRHAKEHCR-VKPVCQGCVLKTIC 217
>gi|30913126|sp|Q9SR66|DML2_ARATH RecName: Full=DEMETER-like protein 2
gi|6143875|gb|AAF04422.1|AC010927_15 hypothetical protein [Arabidopsis thaliana]
Length = 1309
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIP 187
L + G+G K + ++ VDT++ RI+ R+G P P++++ LL +
Sbjct: 875 YLLSINGLGLKSVECVRLLSLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLEL-- 932
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C KP C +C + C+
Sbjct: 933 ----YELHYHMITFGKVFCTKVKPNCNACPMKAECRHY 966
>gi|34764977|ref|ZP_00145303.1| Endonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27885681|gb|EAA23097.1| Endonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 76
Score = 56.5 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 32 FSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKL 91
K+ PK L + F L+VAV+LSAQ TD VN T+ +F+ +TP++ + +++
Sbjct: 1 MEKKFGEPKCALDFKTPFELLVAVILSAQCTDKRVNIVTEEMFKHVNTPEQFANMDLEEI 60
Query: 92 QNYIRTIGIYRKKSE 106
+NYI++ G +R K++
Sbjct: 61 ENYIKSTGFFRNKAK 75
>gi|302338232|ref|YP_003803438.1| HhH-GPD family protein [Spirochaeta smaragdinae DSM 11293]
gi|301635417|gb|ADK80844.1| HhH-GPD family protein [Spirochaeta smaragdinae DSM 11293]
Length = 240
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 41 GELYYVNH------FTLIVAVLLSAQSTDVNVNKATKHLFEI-ADTPQKMLAIGEKKLQN 93
L Y F + + +L+ + NV + L E A Q++LA+ +++L+
Sbjct: 38 HPLDYSIPATAHRRFEIALGAILTQNTAWRNVRLCLESLDEAGAIDMQRLLALSDERLEA 97
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNK----IPQTLEGLTRLPGIGRKGANVILSMAF 149
IR+ G YR+K+ + +L+ + + + E L L GIG + A+ IL AF
Sbjct: 98 LIRSSGYYRQKARKLKTLARFFLENGYGEVSAASTPSREELLSLWGIGEETADSILLYAF 157
Query: 150 GIPTIGVDTHIFRISNR------------IGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
G+P + +D + RI R L+ V+Q + H
Sbjct: 158 GVPVLVIDAYTRRILARLKGEELSDREIRDYLSSATEGKAVKQQRRIL------NEFHAL 211
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCK 223
V HG+ C R P C C I CK
Sbjct: 212 FVEHGKTRCAKRSPDCDHCGIKAWCK 237
>gi|217031901|ref|ZP_03437403.1| hypothetical protein HPB128_3g20 [Helicobacter pylori B128]
gi|216946370|gb|EEC24975.1| hypothetical protein HPB128_3g20 [Helicobacter pylori B128]
Length = 259
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIPPK 189
+LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 1 MKLPGIGTYTANAILCFGFREKSACVDANIKRALLRLFGLDPNTTAKDLQIKANDFLNLN 60
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+N + L+ G +C KP+C C ++ C
Sbjct: 61 ESFNHNQALIDLGALICSP-KPKCAICPLNPYC 92
>gi|308803847|ref|XP_003079236.1| DEMETER protein (ISS) [Ostreococcus tauri]
gi|116057691|emb|CAL53894.1| DEMETER protein (ISS) [Ostreococcus tauri]
Length = 856
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 59/175 (33%), Gaps = 15/175 (8%)
Query: 68 KATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTL 127
A L A +K A K + L + +
Sbjct: 206 PAWVDLLSPASPSRKKRARVWKGKNFDLIVXXXXXXXRVMAQRGCLSLEFLREAPTDEAR 265
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE-------- 179
E L L G+G K + +L +A VD ++ RI R+G P ++ +E
Sbjct: 266 EYLLALDGMGVKTTSCVLLLALHRTDFPVDVNVGRIMARLGWVPLESETALEELAQYAPE 325
Query: 180 -------QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ L Y HY ++ G+ C R P C +C + ++C+ KQ
Sbjct: 326 PAVYTFLRKRLNSFGIDMLYELHYHMITLGKVFCGKRLPNCGACPLRDICEYAKQ 380
>gi|206895383|ref|YP_002247503.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
gi|206738000|gb|ACI17078.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
Length = 208
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 13/202 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
+ + L P P + F + V+ +L+ ++ NV+KA + L + +
Sbjct: 1 MHTLISLLLAFQPDP-NWWPGSSSFEIAVSAVLTQNTSWNNVSKAMERLAKSGINNWE-Q 58
Query: 85 AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
+ K L+ I G YR+K+ + L+ + + E L + GIG + A+ I
Sbjct: 59 ILKAKDLETIINPAGFYRRKATTLRELAML----MQKDPIPSREELLNVKGIGPETADSI 114
Query: 145 LSMAFGIPTIGVDTHIFRISNRIGLAPG-KTPNKVEQSLLRIIPPKH-----QYNAHYWL 198
L A G P + VD++ +R+ GL G +++Q L+ + H
Sbjct: 115 LLYALGKPEMVVDSYTYRVLRNCGLVNGPFNYEQIKQLLITTLGQDSTNVDILKRLHAAF 174
Query: 199 VLHGRYVCKARKPQCQSCIISN 220
V + CK +KP C C ++
Sbjct: 175 VEVAKNYCK-KKPHCVECPLNK 195
>gi|205373880|ref|ZP_03226682.1| endonuclease III [Bacillus coahuilensis m4-4]
Length = 59
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF 74
+ T K++E + +P EL + N F L++AV LSAQ TD VNK TK+LF
Sbjct: 1 MLTLKQIEYVVNTMGDMYPDAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLF 56
>gi|222631769|gb|EEE63901.1| hypothetical protein OsJ_18726 [Oryza sativa Japonica Group]
Length = 1837
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 27/193 (13%)
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ K + + + +++ + IR G+ +E I + L+ +
Sbjct: 1308 QACGNYQMKERIFDRRDSVDWEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDH 1367
Query: 120 DNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ + + L + G+G K + + VDT++ RI R+G
Sbjct: 1368 GSIDLEWLRDVPPDSAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWV 1427
Query: 171 P-GKTPNKVEQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQ 212
P P ++ LL + P Y HY ++ G+ C KP
Sbjct: 1428 PIQPLPESLQLHLLELYPVLETIQKYLWPRLCKLDQQTLYELHYQMITFGKVFCTKSKPN 1487
Query: 213 CQSCIISNLCKRI 225
C +C + + CK
Sbjct: 1488 CNACPMRSECKHF 1500
>gi|77405959|ref|ZP_00783038.1| A/G-specific adenine glycosylase [Streptococcus agalactiae H36B]
gi|77175411|gb|EAO78201.1| A/G-specific adenine glycosylase [Streptococcus agalactiae H36B]
Length = 314
Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPG 135
+ + + E++L + Y + N+ + ++ +F P T + + L G
Sbjct: 1 MFPQIKDLADAPEEQLLKAWEGLXYYS-RVRNMQXAAQQVMVDFGGIFPHTYDDIASLKG 59
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKH 190
IG A I S++F +P VD ++ R+ + K + + +I P
Sbjct: 60 IGPYTAGAIASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDR 119
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIIS 219
+ + L+ G + A+ P+ I
Sbjct: 120 PGDFNQALMDLGTDIESAKTPRPDESPIR 148
>gi|269215940|ref|ZP_06159794.1| putative A/G-specific adenine glycosylase [Slackia exigua ATCC
700122]
gi|269130199|gb|EEZ61277.1| putative A/G-specific adenine glycosylase [Slackia exigua ATCC
700122]
Length = 293
Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 6/169 (3%)
Query: 41 GELYYVN---HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+L + N + + V+ ++ Q+ V T + A L +
Sbjct: 34 RDLPWRNVTDPYAIWVSEVMLQQTQVARVLTRWGRFMARFPTLDALSASARIDLLEEWQG 93
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G R+ + + I + +F +P+T E L LPGIG A I++ + P+ ++
Sbjct: 94 MGYNRRALA-LKQAADICVRDFAGHLPETYEALVALPGIGPSTAAGIMAFSHDAPSTYIE 152
Query: 158 THIFRISNRIGL--APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
T++ + A + + P +Y L+ +G
Sbjct: 153 TNVRAVFIHHFFPDAQDVPDKDIRPLVEATCPDADVRGWYYALLDYGAE 201
>gi|325568082|ref|ZP_08144523.1| deoxyribonuclease (pyrimidine dimer) [Enterococcus casseliflavus
ATCC 12755]
gi|325158283|gb|EGC70434.1| deoxyribonuclease (pyrimidine dimer) [Enterococcus casseliflavus
ATCC 12755]
Length = 233
Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 11/207 (5%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK 68
+ + + + + +EE++ S N + ++V +L + NV
Sbjct: 8 ATASKNEVFNVKKIENIEELYEALSTSM-EHSTWWDTENPWEIVVGSILVQNTNWKNVAY 66
Query: 69 ATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK----- 122
+ ++ +P+++ I + LQ+ IR G Y+ KS I + +
Sbjct: 67 SLANIRREIGFSPKRLAEIDQFLLQDLIRPSGFYKNKSRAIKEIFSWFQRYNYDIGILQK 126
Query: 123 --IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+ + L + G+G + A+V++ F D + RI +R+GL T ++
Sbjct: 127 KEQAELRKELLAIYGVGYETADVLMVFVFNKVVFIADKYAQRIFSRLGLNEPLTYLTLQN 186
Query: 181 SLL--RIIPPKHQYNAHYWLVLHGRYV 205
+ + N H WLV +G+
Sbjct: 187 MIELPDTFTNEQAQNFHGWLVDYGQVH 213
>gi|154150762|ref|YP_001404380.1| HhH-GPD family protein [Candidatus Methanoregula boonei 6A8]
gi|153999314|gb|ABS55737.1| HhH-GPD family protein [Methanoregula boonei 6A8]
Length = 315
Score = 56.1 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 3/161 (1%)
Query: 44 YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRK 103
+ + + ++V+ ++ Q+ V + + + +G R+
Sbjct: 72 HTDDPYRILVSEIMLQQTQVDRVAIKYPEFIAAFPDAAALARAPLADVLAAWQGMGYNRR 131
Query: 104 KSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ + +++EF +P L PGIG A I + A+ +P + ++T+I R+
Sbjct: 132 AVA-LKKSAEKMVDEFGGTLPGDPAVLATFPGIGPATAASICAFAYNLPVVFIETNIRRV 190
Query: 164 SNRIGLAPGKTPNKVEQSL--LRIIPPKHQYNAHYWLVLHG 202
+ T E + + ++ ++ L+ G
Sbjct: 191 FIHFFFSDADTVTDAEILPLVEQTLDRENPRVWYWALMDLG 231
>gi|330900957|gb|EGH32376.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 182
Score = 55.7 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 13/36 (36%)
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
N ++ G +C KP C C + C+
Sbjct: 2 SRVNNYTQAMMDLGATLCTRSKPSCLLCPLERSCEA 37
>gi|170286943|dbj|BAG13468.1| endonuclease III [uncultured Termite group 1 bacterium]
Length = 52
Score = 55.7 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
K+E+ L++ IP K+ N + + GR +CKAR P C ++ +C ++
Sbjct: 1 VKIEKDLMKTIPKKYWMNFSFLIQTLGRIICKARNPGHIVCPLNEICPSSQK 52
>gi|213162848|ref|ZP_03348558.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 191
Score = 55.7 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC KP+C C + N C
Sbjct: 21 FNQAMMDLGAMVCTRSKPKCTLCPLQNGC 49
>gi|293331251|ref|NP_001168988.1| hypothetical protein LOC100382817 [Zea mays]
gi|223974285|gb|ACN31330.1| unknown [Zea mays]
Length = 650
Score = 55.7 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
I + Y H ++ G+ VC+ + P C +C S CK
Sbjct: 285 IDKEKLYEPHCLMITFGKVVCRKKNPNCGACPFSASCKYY 324
>gi|242090707|ref|XP_002441186.1| hypothetical protein SORBIDRAFT_09g021920 [Sorghum bicolor]
gi|241946471|gb|EES19616.1| hypothetical protein SORBIDRAFT_09g021920 [Sorghum bicolor]
Length = 1704
Score = 55.7 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKV 178
+ L + G+G K + + VDT++ RI R+G P P +
Sbjct: 1270 YIPPDSAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWVPIQPLPESL 1329
Query: 179 EQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ LL + P Y HY ++ G+ C KP C +C + +
Sbjct: 1330 QLHLLELYPILETIQKYLWPRLCKLDQQTLYELHYQMITFGKVFCTKSKPNCNACPMRSE 1389
Query: 222 CKRI 225
CK
Sbjct: 1390 CKHF 1393
>gi|94993079|ref|YP_601178.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS2096]
gi|94546587|gb|ABF36634.1| A/G-specific adenine DNA glycosylase [Streptococcus pyogenes
MGAS2096]
Length = 307
Score = 55.7 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+A ++ Y + N+ + ++ +F P T + + L GIG A
Sbjct: 1 MADAPEEQLLKAWEGLGYYSRVRNMQKAAQQVMVDFGGIFPHTYDDIASLKGIGPYTAGA 60
Query: 144 ILSMAFGIPTIGVDTHIFRISN-----RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
I S++F +P VD ++ R+ + K + + +I P + + L
Sbjct: 61 IASISFNLPEPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQAL 120
Query: 199 VLHGRYVCKARKPQCQSCIIS 219
+ G + A+ P+ I
Sbjct: 121 MDLGTDIESAKTPRPDESPIR 141
>gi|213416492|ref|ZP_03349636.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 180
Score = 55.7 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 194 AHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ ++ G VC KP+C C + N C
Sbjct: 10 FNQAMMDLGAMVCTRSKPKCTLCPLQNGC 38
>gi|151941378|gb|EDN59749.1| DNA glycosylase [Saccharomyces cerevisiae YJM789]
Length = 399
Score = 55.7 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
+++ V+LS+Q+ D A ++ + L I ++G
Sbjct: 145 QVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGF 204
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTH 159
+ +K++ I+S IL ++F + +P T+ L LPG+G K A + L A+G I VD H
Sbjct: 205 HTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVH 264
Query: 160 IFRISNRIGLAPGKT---PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+ R++ + P++ L +P + LV G+ + K+R
Sbjct: 265 VDRLTKLWKWVDPQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQIITKSRN 318
>gi|222631766|gb|EEE63898.1| hypothetical protein OsJ_18723 [Oryza sativa Japonica Group]
Length = 1857
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 27/193 (13%)
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ K + + + +++ + IR G+ +E I + L+ +
Sbjct: 1318 QACGNYQMKERIFDRRDSVDWEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDH 1377
Query: 120 DNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ + + L + G+G K + + VDT++ RI R+G
Sbjct: 1378 GSIDLEWLRDVPPDSAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWV 1437
Query: 171 P-GKTPNKVEQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQ 212
P P ++ LL + P Y HY ++ G+ C KP
Sbjct: 1438 PIQPLPESLQLHLLELYPVLETIQKYLWPRLCKLDQQTLYELHYQMITFGKVFCTKSKPN 1497
Query: 213 CQSCIISNLCKRI 225
C +C + + C+
Sbjct: 1498 CNACPMRSECRHF 1510
>gi|222617989|gb|EEE54121.1| hypothetical protein OsJ_00892 [Oryza sativa Japonica Group]
Length = 1964
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL---RIIPPKHQYNAHYWLVLHGRYV 205
+ L +++ L + + Y HY ++ G+
Sbjct: 1534 CVRLGWVPLQPLPESLQLHLLEMYPMLENIQKYLWPRLCKLDQRTLYELHYQMITFGKVF 1593
Query: 206 CKARKPQCQSCIISNLCKRI 225
C KP C +C + CK
Sbjct: 1594 CTKSKPNCNACPMRAECKHF 1613
>gi|220682961|gb|ACL80319.1| DNA glycosylase/lyase 701 [Oryza sativa Japonica Group]
Length = 1812
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 27/193 (13%)
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ K + + + +++ + IR G+ +E I + L+ +
Sbjct: 1273 QACGNYQMKERIFDRRDSVDWEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDH 1332
Query: 120 DNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ + + L + G+G K + + VDT++ RI R+G
Sbjct: 1333 GSIDLEWLRDVPPDSAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWV 1392
Query: 171 P-GKTPNKVEQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQ 212
P P ++ LL + P Y HY ++ G+ C KP
Sbjct: 1393 PIQPLPESLQLHLLELYPVLETIQKYLWPRLCKLDQQTLYELHYQMITFGKVFCTKSKPN 1452
Query: 213 CQSCIISNLCKRI 225
C +C + + C+
Sbjct: 1453 CNACPMRSECRHF 1465
>gi|6319304|ref|NP_009387.1| Ntg1p [Saccharomyces cerevisiae S288c]
gi|401436|sp|P31378|NTG1_YEAST RecName: Full=Mitochondrial DNA base excision repair N-glycosylase
1; Flags: Precursor
gi|171860|gb|AAC04942.1| Ntg1p: endonuclease III-like glycosylase 1 [Saccharomyces
cerevisiae]
gi|207347995|gb|EDZ73989.1| YAL015Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272284|gb|EEU07269.1| Ntg1p [Saccharomyces cerevisiae JAY291]
gi|259144698|emb|CAY77639.1| Ntg1p [Saccharomyces cerevisiae EC1118]
gi|285810187|tpg|DAA06973.1| TPA: Ntg1p [Saccharomyces cerevisiae S288c]
gi|323334796|gb|EGA76168.1| Ntg1p [Saccharomyces cerevisiae AWRI796]
gi|323338890|gb|EGA80104.1| Ntg1p [Saccharomyces cerevisiae Vin13]
Length = 399
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
+++ V+LS+Q+ D A ++ + L I ++G
Sbjct: 145 QVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGF 204
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTH 159
+ +K++ I+S IL ++F + +P T+ L LPG+G K A + L A+G I VD H
Sbjct: 205 HTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVH 264
Query: 160 IFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+ R++ KTP++ L +P + LV G+ + K+R
Sbjct: 265 VDRLTKLWKWVDAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQIITKSRN 318
>gi|257075860|ref|ZP_05570221.1| endonuclease III [Ferroplasma acidarmanus fer1]
Length = 210
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLF-EIADTPQKMLAI 86
++ L + + + + ++ +L+ ++ NV KA K + T ++
Sbjct: 5 LYNLLYVYYGNLE-WWPSETDDETVIGTILTQNTSWKNVEKALKKMKENHVYTLDEIATT 63
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILIN-------EFDNKIPQTLEGLTRLPGIGRK 139
+++L+ I++ G Y +KS ++++S + + + + + L G+G +
Sbjct: 64 DQERLKELIKSSGFYNQKSRYLLTVSKEITEKYGNLPGMKNKDMKEIEGFIMGLDGVGNE 123
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP-KHQYNAHYWL 198
I+ A P VD + R R + ++ N H +
Sbjct: 124 TMESIMLYALDYPVFVVDAYTLRFFKRFY-GKEFSRKEIRNYAEEEFSEIDQLKNFHGMI 182
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
V G+ CK + P C+SC + N C K
Sbjct: 183 VNLGKDFCK-KTPVCKSCFLRNDCLYGK 209
>gi|257063992|ref|YP_003143664.1| A/G-specific DNA glycosylase [Slackia heliotrinireducens DSM 20476]
gi|256791645|gb|ACV22315.1| A/G-specific DNA glycosylase [Slackia heliotrinireducens DSM 20476]
Length = 284
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 6/193 (3%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVN---HFTLIVAVLLSAQSTDVNVNKATKH 72
+ T EL L + +L + + + + ++ ++ Q+ V +
Sbjct: 1 MAPTPTTSELHAFVQLVREEGKRLYRDLPWRDTRDPYAIWISEVMLQQTQVPRVLTRWER 60
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
T + A + + +G R+ + + I +F +P+T + L
Sbjct: 61 FMTRFPTVDALSAAASADVLEEWQGMGYNRRALA-LKRAADICSADFAGALPKTHDELIG 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSLLRIIPPKH 190
LPGIG A IL+ A+ P+I ++T++ + + ++ + P
Sbjct: 120 LPGIGPSTAAGILAFAYDEPSIYIETNVRAVFIHHFFPESDSVSDKEIRPLVEACCPDSD 179
Query: 191 QYNAHYWLVLHGR 203
+Y L+ +G
Sbjct: 180 VRGWYYALLDYGA 192
>gi|45382709|ref|NP_990024.1| methyl-CpG binding domain protein 4 [Gallus gallus]
gi|7739720|gb|AAF68981.1|AF257107_1 5-methylcytosine G/T mismatch-specific DNA glycosylase [Gallus
gallus]
Length = 416
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 18/183 (9%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L++A
Sbjct: 245 VDRRKTSPYFSSKYSKEALSPPRR----KAFRKWTP-PRSPFNLVQETLFHDPWKLLIAT 299
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ +P+ K++ +R +G+Y +++ II S
Sbjct: 300 IFLNKTSGKMAIPVLWEFLRKYPSPEVARTADWKEMSELLRPLGLYALRAKTIIKFSDEY 359
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+N+ L GIG+ G + L
Sbjct: 360 LNKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHAWLWENHEK 412
Query: 176 NKV 178
V
Sbjct: 413 LSV 415
>gi|167892754|ref|ZP_02480156.1| A/G-specific adenine glycosylase [Burkholderia pseudomallei 7894]
Length = 255
Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 5/150 (3%)
Query: 40 KGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+ +L + + + + ++ ++ Q+ V E + A +
Sbjct: 33 RHDLPWQNTRDPYRIWLSEIMLQQTQVSTVVPYYVRFLERYPDVAALAAAPIDDVMALWA 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G Y ++ N+ + ++ P + E L LPGIGR A I S AFG +
Sbjct: 93 GLGYYS-RARNLHRCAQAVVERHGGAFPASPEALAELPGIGRSTAAAIASFAFGARATIL 151
Query: 157 DTHIFRISNRIGLAPGKTPNK-VEQSLLRI 185
D ++ R+ R+ G +K +E + +
Sbjct: 152 DGNVKRVLARVFGVEGFPGDKRIENEMWAL 181
>gi|325970711|ref|YP_004246902.1| HhH-GPD family protein [Spirochaeta sp. Buddy]
gi|324025949|gb|ADY12708.1| HhH-GPD family protein [Spirochaeta sp. Buddy]
Length = 294
Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 70/184 (38%), Gaps = 8/184 (4%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
LEE + + + + ++++ ++ Q+ V + + T
Sbjct: 27 LEEFRSRILSFYERHGRHFSWRQTSDPYHILLSEVMLQQTQTSRVEPKYELFLSLWPTFA 86
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ +L + + +G + + S + ++ IP + LPG+G+ A
Sbjct: 87 DLAGSSLDELLFHWKGLGY--NRRALNLRKSAKMTEAWNWTIPDDPLLIASLPGVGKSTA 144
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN--KVEQSLLRIIPP-KHQYNAHYWL 198
+L+ + +I ++T+I R+ A + ++E L + + + +Y L
Sbjct: 145 AALLAFCYHHKSIYLETNIRRVLLTCFFAEEEAVKDRQLENLLASLADGVQDMKSWYYAL 204
Query: 199 VLHG 202
+ +G
Sbjct: 205 MDYG 208
>gi|224066699|ref|XP_002187591.1| PREDICTED: methyl-CpG binding domain protein 4 [Taeniopygia
guttata]
Length = 422
Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 55/183 (30%), Gaps = 18/183 (9%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P P P+ + + + L++A
Sbjct: 251 VERRKTSPYFSSKYSKEALSPPRR----KALRKWTP-PRSPFNLIQETLFHDPWKLLIAT 305
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ + +P+ A K++ ++ +G+Y +++ II S
Sbjct: 306 IFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEY 365
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+++ L GIG+ G + L +
Sbjct: 366 LSKAWRYP-------IELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTWLWENRER 418
Query: 176 NKV 178
+
Sbjct: 419 LSI 421
>gi|4581149|gb|AAD24633.1| hypothetical protein [Arabidopsis thaliana]
Length = 1207
Score = 54.9 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
P K +Y HY ++ G+ C KP C +C + C+
Sbjct: 919 PDKAKYELHYQMITFGKVFCTKSKPNCNACPMKGECRHF 957
>gi|326510563|dbj|BAJ87498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 54.9 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V LLS +TD +A L + +++ L++ IR G+ K+ I ++
Sbjct: 86 LVTTLLSQNTTDAISRRAFASLKAAFPSWDQVVDEEGMGLEDAIRCGGLAATKAARIRAM 145
Query: 112 SHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ + + L++ GIG K +L VDTH+ R
Sbjct: 146 LRGVREKRGAICLEYLRDLSVDEVKRELSQFKGIGPKTVACVLMFYLQKDDFPVDTHVLR 205
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKAR----KPQ--C 213
I+ +G P T K + IP +++ + V HG+ C + KP+
Sbjct: 206 ITKALGWVPPTATREKAYIHMNNKIPDDLKFDLNCLFVTHGKLCQSCTIKLGVQKPKDVK 265
Query: 214 QSCIISNLC 222
C +++ C
Sbjct: 266 AVCPLASYC 274
>gi|270308861|ref|YP_003330919.1| HhH-GPD protein [Dehalococcoides sp. VS]
gi|270154753|gb|ACZ62591.1| HhH-GPD protein [Dehalococcoides sp. VS]
Length = 223
Score = 54.9 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 14/209 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AI 86
I+ K+ P+ + F ++ +L+ + NV KA L + +
Sbjct: 13 IYRCLLKKYG-PQHWWPAESRFEMMAGAVLTQSAAWTNVEKAISRLKAADLLSPEAILEA 71
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE--------GLTRLPGIGR 138
E L IR+ G + K+ + +LS L + + + L + G+G
Sbjct: 72 DEHYLAKAIRSSGYFNVKARKLKALSAWLQASYSGQADKLPYSDVTTLRKELLGVWGVGE 131
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKHQ--YNAH 195
+ A+ IL A G P +D + RI +R+GLA ++++ + H
Sbjct: 132 ETADSILLYACGKPVFVIDAYTRRIFSRLGLAEKEAGYDRLQGLFTSNLAADAAVFNEYH 191
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+V H + C+ KP C+ C++ +CK
Sbjct: 192 ALIVRHAKEHCR-VKPVCKGCVLKAVCKF 219
>gi|78356480|ref|YP_387929.1| DNA-3-methyladenine glycosylase III [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78218885|gb|ABB38234.1| DNA-3-methyladenine glycosylase III [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 221
Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 12/198 (6%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK-MLAIGEKKLQNYIRT 97
P G + F + +L+ ++ N +A + + + + A L+ +R
Sbjct: 20 PSGWWPAGSPFEVAAGAVLTQNASWTNAGQALQRMRSADMLSESGVAAAAPDTLEELVRP 79
Query: 98 IGIYRKKSENIISLSHILINEFD--------NKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G YR+K+ + L L E D + L + GIG + A+ IL A
Sbjct: 80 AGFYRQKAATLRRLVQFLYEEADGDIRNLAGTSMDSLRARLLDIKGIGPETADSILLYAL 139
Query: 150 GIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVC 206
+P+ VD + RI R GL P ++ + + ++P H LV + C
Sbjct: 140 DMPSFVVDAYTRRICVRHGLLPEDVQYAEMREFFMDVLPADVSVYNEYHALLVRVAKEWC 199
Query: 207 KARKPQCQSCIISNLCKR 224
+ P+C SC + +
Sbjct: 200 RKTHPRCDSCPLRQFLEY 217
>gi|302336475|ref|YP_003801682.1| A/G-specific DNA-adenine glycosylase [Olsenella uli DSM 7084]
gi|301320315|gb|ADK68802.1| A/G-specific DNA-adenine glycosylase [Olsenella uli DSM 7084]
Length = 290
Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 32/199 (16%)
Query: 27 EIFYLF-----SLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
E F + + L + + + + ++ ++ Q+ V+ + E+
Sbjct: 8 ESFRRLVLARGAELYRD----LPWRRTRDPYQVWISEVMLQQTQVTRVDGRWQRWVELFP 63
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGR 138
TP + A + + +G + + + +++ ++P+ L LPGIG
Sbjct: 64 TPDALAAADSADVLEEWQGMGY--NRRALSLWKAAGMVSARGGQMPRAYADLLALPGIGP 121
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII------------ 186
A I + ++ +P + ++T++ + P+ V+ + ++
Sbjct: 122 ATAAGIRAFSYNLPGVYLETNVRSV-----FIHELYPDAVDVTDRELLPLVERSCPMDDS 176
Query: 187 -PPKHQYNAHYWLVLHGRY 204
P +Y L+ +G Y
Sbjct: 177 DPNDDPRTWYYALLDYGAY 195
>gi|116625495|ref|YP_827651.1| DNA-3-methyladenine glycosylase III [Candidatus Solibacter usitatus
Ellin6076]
gi|116228657|gb|ABJ87366.1| DNA-3-methyladenine glycosylase III [Candidatus Solibacter usitatus
Ellin6076]
Length = 227
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 19/217 (8%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIV---AVLLSAQSTDVNVNKATK-------HL 73
+ +++ +P F L++ A L V + +
Sbjct: 3 DFKKLIARLQKHHGAPSVP-PARGAFELVLWENACYLLPDERRAQVFEGLRTQVGLTAAA 61
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
A + ++ R S L Q + L
Sbjct: 62 IAKAPREVLLPLATLGGMRPETRVFRWQEIARITNQQFSGDLEQILKLPYAQAKKALKLF 121
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL------APGKTPNKVEQSLLRIIP 187
P IG GA IL + ++ R+ R+G G V++++ +P
Sbjct: 122 PNIGDPGAEKILLFCGMAQGLPLEWAGLRVLTRVGYGRVHLKNYGAMYKSVQEAIAGELP 181
Query: 188 PKHQY--NAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
AH L HG+ +C+ + P C C + + C
Sbjct: 182 KSAPTLVKAHLLLREHGKKICRDKSPACHECPLEDTC 218
>gi|297827135|ref|XP_002881450.1| hypothetical protein ARALYDRAFT_482629 [Arabidopsis lyrata subsp.
lyrata]
gi|297327289|gb|EFH57709.1| hypothetical protein ARALYDRAFT_482629 [Arabidopsis lyrata subsp.
lyrata]
Length = 1432
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ K Y HY ++ G+ C KP C +C + C+
Sbjct: 1057 LDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1096
>gi|77798668|gb|ABB03481.1| MutY [Helicobacter pylori]
Length = 152
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|149052033|gb|EDM03850.1| nth (endonuclease III)-like 1 (E.coli) (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 120
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 157 DTHIFRISNRIGLA--PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
DTH+ RI+NR+ K+P + ++L +P + LV G+ +C P+CQ
Sbjct: 47 DTHVHRIANRLKWTKKMTKSPEETRRNLEEWLPRVLWSEINGLLVGFGQQICLPVHPRCQ 106
Query: 215 SCIISNLCKRIK 226
+C+ LC +
Sbjct: 107 ACLNKALCPAAQ 118
>gi|186516091|ref|NP_001119112.1| DML3 (DEMETER-LIKE PROTEIN 3); DNA N-glycosylase [Arabidopsis
thaliana]
gi|332660917|gb|AEE86317.1| DEMETER-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+P + Y HY ++ G+ C P C +C + + CK
Sbjct: 658 LPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSECKYF 697
>gi|52354425|gb|AAU44533.1| hypothetical protein AT4G34060 [Arabidopsis thaliana]
Length = 1044
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+P + Y HY ++ G+ C P C +C + + CK
Sbjct: 658 LPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSECKYF 697
>gi|77798630|gb|ABB03462.1| MutY [Helicobacter pylori]
Length = 152
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V++ E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVDRFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|261885999|ref|ZP_06010038.1| endonuclease III [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 68
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K++++I LF + K EL + N + L+V V+LSAQ TD VN T LF
Sbjct: 1 MRTKKDIKQIKELFLQNFSGAKSELKFKNLYELLVCVMLSAQCTDKRVNLITPELFNAYP 60
Query: 79 T 79
Sbjct: 61 D 61
>gi|227497705|ref|ZP_03927911.1| possible adenine glycosylase [Actinomyces urogenitalis DSM 15434]
gi|226832855|gb|EEH65238.1| possible adenine glycosylase [Actinomyces urogenitalis DSM 15434]
Length = 124
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
++ G VC AR P+CQ C + C+ + Q
Sbjct: 1 MMELGALVCTARDPRCQECPWTAQCRWVAQ 30
>gi|240255311|ref|NP_187612.5| DML2 (DEMETER-LIKE 2); 4 iron, 4 sulfur cluster binding /
catalytic/ endonuclease [Arabidopsis thaliana]
gi|332641327|gb|AEE74848.1| protein demeter-like 2 [Arabidopsis thaliana]
Length = 1332
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIP 187
L + G+G K + ++ VDT++ RI+ R+G P P++++ LL + P
Sbjct: 875 YLLSINGLGLKSVECVRLLSLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934
Query: 188 -----------------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
K Y HY ++ G+ C KP C +C + C+
Sbjct: 935 VLESVQKYLWPRLCKLDQKTLYELHYHMITFGKVFCTKVKPNCNACPMKAECRHY 989
>gi|225848833|ref|YP_002728997.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644602|gb|ACN99652.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
Length = 208
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENI 108
+ + +L+ ++ NV K+ K+L + + + + + L+N I+ G Y +KS +
Sbjct: 31 EISIGAILTQNTSWNNVEKSIKNLIKENCLSFECIDKIDIEKLKNLIKPSGFYNQKSRTL 90
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
L+ + +++ E L + GIG++ A IL A P VD + R+ R+G
Sbjct: 91 KDLAKLFLSK----KDIGREDLLSIKGIGQETAESILLYALDKPYFVVDNYTKRLFYRLG 146
Query: 169 L-APGKTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
A + + +++ + +P H +V H + C+ +KP+C++C +S+ C
Sbjct: 147 FTAENISYSDLQKFITGRLPVDLEIYKEFHALIVKHCKEFCQ-KKPKCENCFLSHKCIFK 205
Query: 226 K 226
K
Sbjct: 206 K 206
>gi|77798652|gb|ABB03473.1| MutY [Helicobacter pylori]
Length = 152
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKNACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|77798650|gb|ABB03472.1| MutY [Helicobacter pylori]
Length = 152
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L LPGIG AN IL F T VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLELPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|148698634|gb|EDL30581.1| mutY homolog (E. coli), isoform CRA_a [Mus musculus]
Length = 262
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 11/148 (7%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTH 159
LPG+GR A I S+AF
Sbjct: 182 LLPGVGRYTAGAIASIAFDQELSPAARG 209
>gi|302680965|ref|XP_003030164.1| hypothetical protein SCHCODRAFT_57851 [Schizophyllum commune H4-8]
gi|300103855|gb|EFI95261.1| hypothetical protein SCHCODRAFT_57851 [Schizophyllum commune H4-8]
Length = 317
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 88/235 (37%), Gaps = 32/235 (13%)
Query: 21 TPKELEEIFYLFSLKW-PSPKGELYYV-------------NHFTLIVAVLLSAQSTDVNV 66
TP + + L + P + N ++ +LS ++ N
Sbjct: 55 TPSDARRVHDLLTEAHGPRVRRTPDASSNANSAKTCGSVPNVIESLIGTILSQNTSGKNS 114
Query: 67 NKATKHLFEIA--DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
+ A + L + + + + IR+ G+ KK+ I + + + +
Sbjct: 115 SGAKRSLDAAFGRNNFAAIADAPTSAVADAIRSGGLANKKAATIQRVLRDIKAKHGSYSL 174
Query: 125 QT----------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK- 173
Q + L G+G K A+ +L G + VDTH+FR+S +G P K
Sbjct: 175 QHLADVCADAEVMRELMAYDGVGPKTASCVLLFCLGRESFAVDTHVFRLSKLLGWVPPKA 234
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC-QSCIISNLCKRIKQ 227
+ + L IP +Y H ++ HGR +C K + SCI+ +K+
Sbjct: 235 DRVQTQAHLDLRIPGDRKYGLHVLMIDHGR-ICTGCKTKGKGSCILKT---YLKE 285
>gi|79496905|ref|NP_195132.3| DML3 (DEMETER-LIKE PROTEIN 3); DNA N-glycosylase [Arabidopsis
thaliana]
gi|84028203|sp|O49498|DML3_ARATH RecName: Full=DEMETER-like protein 3
gi|332660916|gb|AEE86316.1| DEMETER-like protein 3 [Arabidopsis thaliana]
Length = 1044
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+P + Y HY ++ G+ C P C +C + + CK
Sbjct: 658 LPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSECKYF 697
>gi|297827133|ref|XP_002881449.1| hypothetical protein ARALYDRAFT_902767 [Arabidopsis lyrata subsp.
lyrata]
gi|297327288|gb|EFH57708.1| hypothetical protein ARALYDRAFT_902767 [Arabidopsis lyrata subsp.
lyrata]
Length = 1619
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ K Y HY ++ G+ C KP C +C + C+
Sbjct: 1236 LDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1275
>gi|42569673|ref|NP_181190.3| DML1 (DEMETER-LIKE 1); DNA N-glycosylase/ DNA-(apurinic or
apyrimidinic site) lyase/ protein binding [Arabidopsis
thaliana]
gi|71658826|sp|Q9SJQ6|ROS1_ARATH RecName: Full=Protein ROS1; AltName: Full=DEMETER-like protein 1;
AltName: Full=Repressor of silencing 1
gi|30909281|gb|AAP37178.1| ROS1 [Arabidopsis thaliana]
gi|330254169|gb|AEC09263.1| protein ROS1 [Arabidopsis thaliana]
Length = 1393
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA---------------PGK 173
L G+G K + + VDT++ RI+ R+G
Sbjct: 943 YLLSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002
Query: 174 TPNKVEQSLL---RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++ L + K Y HY ++ G+ C KP C +C + C+
Sbjct: 1003 MLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMKGECRHF 1057
>gi|255072753|ref|XP_002500051.1| DNA glycosylase [Micromonas sp. RCC299]
gi|226515313|gb|ACO61309.1| DNA glycosylase [Micromonas sp. RCC299]
Length = 2192
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 24/174 (13%)
Query: 71 KHLFEIADTPQKMLAIGEKKLQNY-IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
A + I + + R I ++ + L + +
Sbjct: 1397 WRAVMNAPLGDVVECIRCRGMHFMQARRIQRILRRIHDERKGELSLEFLRNCTVEIARGY 1456
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---- 185
L L G G K + I ++ VD ++ RI R+G P + EQ+L +
Sbjct: 1457 LLSLEGFGVKTVSCITLLSLFRADFPVDVNVGRIMARLGWV----PLETEQALEELAEYA 1512
Query: 186 -------IPPKHQY--------NAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
+ HY ++ G+ C+ R P C++C + ++C+
Sbjct: 1513 PEPAVYTFLRERLNSFGLQTLFELHYHMITLGKVFCEKRTPNCRACPLRDMCEY 1566
>gi|213162849|ref|ZP_03348559.1| adenine DNA glycosylase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 166
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 1/138 (0%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + ++ ++ Q+ V + T + ++ + +G Y ++
Sbjct: 28 KTPYKVWLSEVMLQQTQVTTVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RA 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + + + PQT + LPG+GR A ILS+A G +D ++ R+
Sbjct: 87 RNLHKAAQQVATLHGGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLA 146
Query: 166 RIGLAPGKTPNKVEQSLL 183
R G K +
Sbjct: 147 RCYAVSGWPGKKRWRIRC 164
>gi|77798614|gb|ABB03454.1| MutY [Helicobacter pylori]
gi|77798624|gb|ABB03459.1| MutY [Helicobacter pylori]
gi|77798628|gb|ABB03461.1| MutY [Helicobacter pylori]
gi|77798658|gb|ABB03476.1| MutY [Helicobacter pylori]
gi|77798660|gb|ABB03477.1| MutY [Helicobacter pylori]
gi|77798666|gb|ABB03480.1| MutY [Helicobacter pylori]
gi|77798670|gb|ABB03482.1| MutY [Helicobacter pylori]
gi|77798682|gb|ABB03488.1| MutY [Helicobacter pylori]
gi|77798736|gb|ABB03515.1| MutY [Helicobacter pylori]
Length = 152
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|77798610|gb|ABB03452.1| MutY [Helicobacter pylori]
gi|77798678|gb|ABB03486.1| MutY [Helicobacter pylori]
gi|77798752|gb|ABB03523.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + ++ T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLKVFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|297833776|ref|XP_002884770.1| hypothetical protein ARALYDRAFT_341139 [Arabidopsis lyrata subsp.
lyrata]
gi|297330610|gb|EFH61029.1| hypothetical protein ARALYDRAFT_341139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1078
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 18/122 (14%)
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQ 180
Q E L + G+G K + ++ VDT++ RI+ R+G P P++++
Sbjct: 648 HPDQAKEYLLSINGLGLKSVECVRLLSLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQM 707
Query: 181 SLLRIIP-----------------PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
LL + P K Y HY ++ G+ C KP C +C + C+
Sbjct: 708 HLLELYPVLESVQKYLWPRLCKLDQKTLYELHYHMITFGKVFCTKVKPNCNACPMKAECR 767
Query: 224 RI 225
Sbjct: 768 HY 769
>gi|77798632|gb|ABB03463.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T Q + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLQDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|225848971|ref|YP_002729135.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644361|gb|ACN99411.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
Length = 114
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 26 EEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA 85
+E+ +P P +L + N + L VA +L+AQSTD VN+ T F+ TPQ +
Sbjct: 7 KELIDRLKKHFPQPWIDLNFENPYQLTVATILAAQSTDKKVNQITPIFFKKFPTPQDVAK 66
Query: 86 IGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
++++ I++I Y++K++ I ++ EF KIP +E
Sbjct: 67 APLEEIEEIIKSINYYKRKAKLIKECCKKVVEEFGGKIPDNMEEY 111
>gi|77798680|gb|ABB03487.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T Q + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLQDLADAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|138996985|dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
Length = 1796
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT---------LEG 129
+ + ++ + IR G+ +E I + + E + + E
Sbjct: 1272 DWEAVRCADVNEIAHTIRERGMNNMLAERIKDFLNRIFREHGSIDLEWLRDVPPDKAKEY 1331
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIP- 187
L + G+G K + + VDT++ RI+ R+G P P ++ LL + P
Sbjct: 1332 LLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPV 1391
Query: 188 -----PKHQ-----------YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C KP C +C + C+
Sbjct: 1392 LESIQKYLWPRLCKLDQRTLYELHYHMITFGKVFCTKSKPNCNACPLRGECRHF 1445
>gi|70929907|ref|XP_736943.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511913|emb|CAH74660.1| hypothetical protein PC000266.00.0 [Plasmodium chabaudi chabaudi]
Length = 239
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR------II 186
LPGIG A I + I VDT+I RI +RI + +
Sbjct: 22 LPGIGNYTAKAISIHLYNSKDICVDTNIIRIFSRITDTINYYGSTILSQHCEEVSNILCT 81
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + + L+ G +C + PQC C ++ C
Sbjct: 82 DTCNYSDFNQALMDLGSSICNS-SPQCSICPLNKYC 116
>gi|77798690|gb|ABB03492.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + + T + + +++ R +G Y +++N+ + I + E ++++P
Sbjct: 6 VVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 65 NDYQSLLKLPGIGTYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 125 EFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|270653149|ref|ZP_06222277.1| endonuclease III [Haemophilus influenzae HK1212]
gi|270317086|gb|EFA28726.1| endonuclease III [Haemophilus influenzae HK1212]
Length = 40
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H+WL+LHGRY C ARKP+C SCII +LC+ ++
Sbjct: 3 DVHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEK 37
>gi|77798750|gb|ABB03522.1| MutY [Helicobacter pylori]
gi|77798758|gb|ABB03526.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + E T + + +++ R +G Y +++N+ + I + E +++P
Sbjct: 6 VVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD +I R+ GL P ++
Sbjct: 65 NDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 125 DFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|77798638|gb|ABB03466.1| MutY [Helicobacter pylori]
gi|77798648|gb|ABB03471.1| MutY [Helicobacter pylori]
gi|77798656|gb|ABB03475.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
Length = 652
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 57/213 (26%), Gaps = 14/213 (6%)
Query: 21 TPKELEEIFYLFSLKWPS----PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TP +I + + + L + +I A +L ++ V L
Sbjct: 425 TPYRSRDIAHALATWFDDLSEPALPWLRARTRWQVISAEMLLDRTAPEQVRILWSLLERW 484
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
+ A E I ++E ++ L+ L ++ D + L +
Sbjct: 485 EQPQDTVDAGDEL---VEIGRWINREHRAERLLELARTLTSQPDLLDDYKIHSLRGVDAS 541
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII-------PPK 189
A + + G+ + + +
Sbjct: 542 VIDLAVLAIPTRDEDNAEEPVLITKGTHRVAARFTGEHVERSHRMTAGRLAVARMIGDDA 601
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
AH L+ VC+ P C C ++ C
Sbjct: 602 DARRAHLGLIELATSVCRPTDPACPRCPLNRAC 634
>gi|218196882|gb|EEC79309.1| hypothetical protein OsI_20143 [Oryza sativa Indica Group]
Length = 1873
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 27/193 (13%)
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
Q+ K + + + +++ + IR G+ +E I + L+ +
Sbjct: 1334 QACGNYQMKERIFDRRDSVDWEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDH 1393
Query: 120 DNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ + + L + G+G K + + VDT++ RI R+G
Sbjct: 1394 GSIDLEWLRDVPPDSAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWV 1453
Query: 171 P-GKTPNKVEQSLLRIIP------PKHQ-----------YNAHYWLVLHGRYVCKARKPQ 212
P P ++ LL + P Y HY ++ G+ C P
Sbjct: 1454 PIQPLPESLQLHLLELYPVLETIQKYLWPRLCKLDQQTLYELHYQMITFGKVFCTKSTPN 1513
Query: 213 CQSCIISNLCKRI 225
C +C + + C+
Sbjct: 1514 CNACPMRSECRHF 1526
>gi|256827283|ref|YP_003151242.1| A/G-specific DNA glycosylase [Cryptobacterium curtum DSM 15641]
gi|256583426|gb|ACU94560.1| A/G-specific DNA glycosylase [Cryptobacterium curtum DSM 15641]
Length = 315
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 21/205 (10%)
Query: 21 TPKELEEIFYLFSLK---WPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLF 74
T + LE + + L + + + + V+ ++ Q+ V K
Sbjct: 36 TEERLEAFRRAVWEAGLAY--ARDNLPWRGIDDAYAVYVSEVMLQQTQVSRVEKFWPRFM 93
Query: 75 EIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLP 134
E T + ++ + +G R+ ++ + + FD+ +P TL+ L LP
Sbjct: 94 EAFPTIDDLAHAETAQVLELWQGLGYNRRALA-LMRAACACVERFDSTMPDTLDDLLSLP 152
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP------- 187
GIG A IL+ AF P + V+T++ + A +IP
Sbjct: 153 GIGPATAGGILAFAFQKPAVYVETNVRAVFIHEFFAHHTEAV----HDRELIPLVEQTCS 208
Query: 188 PKHQYNAHYWLVLHGRYV-CKARKP 211
+ +Y L+ G ++ + P
Sbjct: 209 HDNPRGWYYALLDWGAHIKQTEKNP 233
>gi|226328817|ref|ZP_03804335.1| hypothetical protein PROPEN_02717 [Proteus penneri ATCC 35198]
gi|225202003|gb|EEG84357.1| hypothetical protein PROPEN_02717 [Proteus penneri ATCC 35198]
Length = 175
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 2/166 (1%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+ + ++ + K+ + + ++ ++ Q+ V +
Sbjct: 1 MMEALQFSQVVLNWYHKYGRKTLPWQQEKTPYHVWLSEVMLQQTQVATVIPYFERFISRF 60
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + +G Y ++ N+ + ++++ + P T E + LPG+G
Sbjct: 61 PDVATLAKAPLDEVLHLWTGLGYYA-RARNLHKAAQHIVDKHQGQFPDTFEDVCALPGVG 119
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
R A ILS++ P +D ++ R+ R G K +
Sbjct: 120 RSTAGAILSLSLKKPYPILDGNVKRVLARCYAVEGWPGKKKLKKNC 165
>gi|225449724|ref|XP_002267310.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 2198
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C KP C +C + C+
Sbjct: 1819 LDQRTLYELHYQLITFGKVFCTKHKPNCNACPMRGECRHF 1858
>gi|170101314|ref|XP_001881874.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643229|gb|EDR07482.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 308
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 21 TPKELEEIFYLFSLKW----PSPKGELYYVN----------HFTLIVAVLLSAQS--TDV 64
TP E E+ L P + L N ++ +LS + +
Sbjct: 60 TPAEAREVHELLLTAHRPHEPIRRRPLNSNNSAGTCGNVPNVIEALIGTILSQNTSGQNC 119
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF----- 119
+ K + + + ++L + IR+ G+ KK+ I +L H + +
Sbjct: 120 HRAKTSLDAVFGRNNFVAIAQAPRERLVDAIRSGGLANKKAATIQNLLHSIRGKHGEYSL 179
Query: 120 -----------DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ ++ L G+G K A+ +L G + VDTH+FR+S +G
Sbjct: 180 QHLAAAESSGRRMSDDEIMKELISYDGVGPKTASCVLLFCLGRNSFAVDTHVFRLSKLLG 239
Query: 169 LAPGKTPNKVEQSLLRI-IPPKHQYNAHYWLVLHGRYV--CKARKPQCQSCIISNL 221
P K+ + Q+ L I +P + +Y+ H ++ HGR CK Q+CI+
Sbjct: 240 WVPQKSDRVLAQAHLDIRVPDELKYDLHVLMIQHGRLCKGCKKTG-SGQACILKTY 294
>gi|77798696|gb|ABB03495.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + + T + + +++ R +G Y +++N+ + I + E +++P
Sbjct: 6 VVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 65 NDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 125 EFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|326436846|gb|EGD82416.1| hypothetical protein PTSG_03059 [Salpingoeca sp. ATCC 50818]
Length = 495
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 87/254 (34%), Gaps = 62/254 (24%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
TP E + + + ++ N +V +LS +TD N + A ++L +
Sbjct: 208 TPAECKHMHDALVQLYGPRTRPPHHRAANTNLLDSLVRTILSQNTTDSNSSAAFRNLKQT 267
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN---------KIPQTL 127
T + + + L+ IR+ G+ + KS I S+ L E
Sbjct: 268 FPTWEDVHSADVGALEAAIRSAGLAQTKSRRIKSILDTLHAEHGKLSLEYLRELPSHTVK 327
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP---------------- 171
E L R G+G K + +L A P + VDTH+FR++ R G P
Sbjct: 328 EQLARFKGVGPKTISCLLLFAMQRPDMAVDTHVFRLAKRAGWVPSDVEVRKHNRVVEQEQ 387
Query: 172 ---------------------------------GKTPNKVEQSLLRIIPPKHQYNAHYWL 198
G T + L +P +Y H L
Sbjct: 388 SSCSVASKNSRKRAKRISNDTQNCSASSLHSWPGVTRETTYEHLNATVPDDLKYALHLLL 447
Query: 199 VLHGRYVCKARKPQ 212
+ HGR VCK++
Sbjct: 448 IHHGRRVCKSQGCL 461
>gi|148667124|gb|EDK99540.1| methyl-CpG binding domain protein 4 [Mus musculus]
Length = 554
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P + F P P+ + + + L++A
Sbjct: 383 VEKRKTSLYFSSKYNKEALSPPRRKS----FKKWTP-PRSPFNLVQEILFHDPWKLLIAT 437
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + A + + ++ +G+Y +++ II S
Sbjct: 438 IFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEY 497
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 498 LTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 548
>gi|168003630|ref|XP_001754515.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694136|gb|EDQ80485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + CK
Sbjct: 38 LDHQTLYELHYQMISFGKVFCTKSKPNCNACPMRPECKHF 77
>gi|323456037|gb|EGB11904.1| hypothetical protein AURANDRAFT_14212 [Aureococcus anophagefferens]
Length = 218
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
+ +V+++LS+Q+ D L + + E + I+ +G + K++
Sbjct: 45 YHTLVSLMLSSQTKDTVNAATMAKLVARGLSVSSILDDVPEDEFHEMIKGVGFHNVKTKT 104
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV-DTHIFRISNR 166
I + + L + +P T++ L LPG+G K A ++L AFG+ DTH+ RI N+
Sbjct: 105 IRAATLKLREDHGGAVPGTMDDLLALPGVGPKMALLVLKCAFGVTAGVSVDTHVHRICNQ 164
Query: 167 IGLAPG-----------KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+G G K P K +++ +P + ++ LV G+ V
Sbjct: 165 LGWTGGAPTTDKANFATKDPEKTRRAVESWMPRAIWGDVNWLLVGLGQEV 214
>gi|77798612|gb|ABB03453.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +++ + R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSTEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|225440992|ref|XP_002277401.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1942
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 18/115 (15%)
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIP 187
L G+G K + + VDT++ RI+ R+G P P ++ LL + P
Sbjct: 1485 YLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYP 1544
Query: 188 ------PKHQ-----------YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C KP C +C + C+
Sbjct: 1545 VLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1599
>gi|77798636|gb|ABB03465.1| MutY [Helicobacter pylori]
gi|77798640|gb|ABB03467.1| MutY [Helicobacter pylori]
gi|77798642|gb|ABB03468.1| MutY [Helicobacter pylori]
gi|77798646|gb|ABB03470.1| MutY [Helicobacter pylori]
gi|77798760|gb|ABB03527.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|187960081|ref|NP_034904.2| methyl-CpG-binding domain protein 4 [Mus musculus]
gi|19353797|gb|AAH24812.1| Methyl-CpG binding domain protein 4 [Mus musculus]
Length = 554
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P + F P P+ + + + L++A
Sbjct: 383 VEKRKTSLYFSSKYNKEALSPPRRKS----FKKWTP-PRSPFNLVQEILFHDPWKLLIAT 437
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + A + + ++ +G+Y +++ II S
Sbjct: 438 IFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEY 497
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 498 LTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 548
>gi|50401208|sp|Q9Z2D7|MBD4_MOUSE RecName: Full=Methyl-CpG-binding domain protein 4; AltName:
Full=Methyl-CpG-binding protein MBD4; AltName:
Full=Mismatch-specific DNA N-glycosylase
gi|5929746|gb|AAD56595.1|AF120996_1 methyl-CpG binding protein 4 [Mus musculus domesticus]
gi|3800807|gb|AAC68878.1| methyl-CpG binding protein MBD4 [Mus musculus]
Length = 554
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P + F P P+ + + + L++A
Sbjct: 383 VEKRKTSLYFSSKYNKEALSPPRRKS----FKKWTP-PRSPFNLVQEILFHDPWKLLIAT 437
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + A + + ++ +G+Y +++ II S
Sbjct: 438 IFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEY 497
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 498 LTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 548
>gi|77798726|gb|ABB03510.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|289548145|ref|YP_003473133.1| HhH-GPD family protein [Thermocrinis albus DSM 14484]
gi|289181762|gb|ADC89006.1| HhH-GPD family protein [Thermocrinis albus DSM 14484]
Length = 217
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 28 IFYLFSLKWP----SPKGELYYV----NHF-TLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
++ L + P LY+ + +I+ +L+ + V A L + +
Sbjct: 10 LYQLLLDTYGPQNWWPVDHLYHREHKTDPKDEIIIGAVLTQNTLWSRVEIALDRLKRMGE 69
Query: 79 TPQKMLAIGEKKL-QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
+ ++ + ++ +G YR+K + +L+ +L E L +L GIG
Sbjct: 70 LSLNFVRKCPSEILEEIVKPVGFYRQKVRTLKALAELLEKV----REPNYEDLIKLKGIG 125
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK--HQYNAH 195
+ A VIL AF PT +D + RI R+ TP K ++ + +P H
Sbjct: 126 PETACVILLYAFHQPTFVIDKYTLRILQRLY-GLKLTPKKAKKFMEEHLPKDVGIYKEYH 184
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLC 222
L H + CK+ P C C + C
Sbjct: 185 ALLDQHAKKFCKS-TPLCGGCPAATYC 210
>gi|77798764|gb|ABB03529.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ + R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPIDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|77798754|gb|ABB03524.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|138996990|dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
Length = 1673
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + C+
Sbjct: 1406 LDQRTLYELHYHMITFGKVFCTKSKPNCNACPLRGECRHF 1445
>gi|138996988|dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
Length = 1673
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + C+
Sbjct: 1406 LDQRTLYELHYHMITFGKVFCTKSKPNCNACPLRGECRHF 1445
>gi|77798662|gb|ABB03478.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T Q + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLQDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798654|gb|ABB03474.1| MutY [Helicobacter pylori]
Length = 152
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|46580743|ref|YP_011551.1| HhH-GPD family DNA repair protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601969|ref|YP_966369.1| HhH-GPD family protein [Desulfovibrio vulgaris DP4]
gi|46450163|gb|AAS96811.1| DNA repair protein, HhH-GPD family [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562198|gb|ABM27942.1| DNA-3-methyladenine glycosylase III [Desulfovibrio vulgaris DP4]
gi|311234457|gb|ADP87311.1| HhH-GPD family protein [Desulfovibrio vulgaris RCH1]
Length = 226
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 22/211 (10%)
Query: 30 YLFSLKWPS------PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTPQ 81
L + + P G + + +L+ + NV KA +L +
Sbjct: 7 RLLLDMYAAMSARLGPSGWWPGETPLEVAIGAVLTQNTAWGNVEKAIANLRDAGLLSDVG 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-----------LEGL 130
+LA + ++ IR G +R K+ + L + E L
Sbjct: 67 ALLAASPQLVEACIRPSGYFRMKTTRLRDLMLFFDEACAGDLDALSASAGEDGDALRERL 126
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPK 189
+ GIG + A+ IL AFG P+ VD + RI +R GL P +++ + ++ P
Sbjct: 127 LSVKGIGPETADSILLYAFGHPSFVVDAYTRRILSRHGLLPEDVHYDEMRDFFMDVLDPD 186
Query: 190 --HQYNAHYWLVLHGRYVCKARKPQCQSCII 218
H +V + C +P C +C +
Sbjct: 187 PVLYNEFHALIVRVAKGWCHKSRPDCAACPL 217
>gi|149049684|gb|EDM02138.1| rCG29635 [Rattus norvegicus]
Length = 566
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L+++
Sbjct: 395 VEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIST 449
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ II S
Sbjct: 450 IFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEY 509
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 510 LTKPWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 560
>gi|307109020|gb|EFN57259.1| hypothetical protein CHLNCDRAFT_143807 [Chlorella variabilis]
Length = 463
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/228 (9%), Positives = 59/228 (25%), Gaps = 28/228 (12%)
Query: 6 KSDSYQGNSPL-GCLYTPKELE----EIFYLFSLKWPSPKGELYYV-NHFTLIVAVLLSA 59
++ S +G S G + ++++ EI + L + N + +
Sbjct: 15 RAKSSRGASKAAGSVEDIEDIKFTLAEIRSSLLAWYDENHRVLPWRRNPHSKL------- 67
Query: 60 QSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
S + A + + + + S + +
Sbjct: 68 -SAEAVAAAAAAGQEGAPLDLPRNEFVYYVWICEVMSQQASRAGSSTQVSRAAEYFRRWV 126
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
+ + + + + I ++ + T +++
Sbjct: 127 ARWPTVQALA----GASQEEVNELWAGLGYYRRARYLLDGAKYIVGQLDGSFPTTAAELQ 182
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARK-PQCQSCIISNLCKRIK 226
+ P ++ G VC P+C C +S C ++
Sbjct: 183 AIPGVVTP---------AVMELGATVCVPNTDPKCGECPVSASCAALR 221
>gi|293358880|ref|XP_001059437.2| PREDICTED: methyl-CpG binding domain protein 4 [Rattus norvegicus]
Length = 539
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L+++
Sbjct: 368 VEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIST 422
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ II S
Sbjct: 423 IFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEY 482
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 483 LTKPWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 533
>gi|328473609|gb|EGF44446.1| endonuclease III [Listeria monocytogenes 220]
Length = 97
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+P+ LA+ ++L IR+IG+YR K++
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNKAKIFKDYPRKF 97
>gi|255575365|ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis]
gi|223531981|gb|EEF33793.1| Protein ROS1, putative [Ricinus communis]
Length = 1634
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + C+
Sbjct: 1263 LDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1302
>gi|145334291|ref|NP_001078527.1| DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site)
lyase [Arabidopsis thaliana]
gi|108935833|sp|Q8LK56|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA
glycosylase-related protein DME
gi|84782664|gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana]
gi|332003378|gb|AED90761.1| transcriptional activator DEMETER [Arabidopsis thaliana]
Length = 1987
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C +P C +C + C+
Sbjct: 1609 LDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHF 1648
>gi|293346999|ref|XP_002726494.1| PREDICTED: methyl-CpG binding domain protein 4 [Rattus norvegicus]
Length = 566
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L+++
Sbjct: 395 VEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIST 449
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ II S
Sbjct: 450 IFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEY 509
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 510 LTKPWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 560
>gi|330836259|ref|YP_004410900.1| HhH-GPD family protein [Spirochaeta coccoides DSM 17374]
gi|329748162|gb|AEC01518.1| HhH-GPD family protein [Spirochaeta coccoides DSM 17374]
Length = 327
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 9/172 (5%)
Query: 34 LKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
+P + + + ++++ ++ Q+T V + + EI + M ++ L
Sbjct: 69 RHFPWQQT----RDPWPILLSEVMLQQTTTARVLEKYRLFLEIWPDFRSMASVSLVDLLA 124
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
+G R+ + E+ +P E L LPGIG A I + +
Sbjct: 125 AWSGLGYNRRALALRQTAIRS--EEWGWTLPDDRESLLSLPGIGASTAAAIRCFCYDLRD 182
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW---LVLHG 202
I ++T++ R + + + K + W L+ +G
Sbjct: 183 IYLETNVRRAVLHWFFPDEEGVKDKRIEPILLYAAKRVDDIRQWYYALMDYG 234
>gi|237796305|ref|YP_002863857.1| hypothetical protein CLJ_B3100 [Clostridium botulinum Ba4 str. 657]
gi|229262211|gb|ACQ53244.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 258
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 175 HIIDIAYDIHVRRVFLRIGLVRSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 233
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 234 NPLCDNCPISNLCER 248
>gi|226499668|ref|NP_001146555.1| hypothetical protein LOC100280151 [Zea mays]
gi|219887797|gb|ACL54273.1| unknown [Zea mays]
Length = 501
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 18/122 (14%)
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA----------- 170
+ + + L + G+G K + + VDT++ RI R+G
Sbjct: 32 QPDKAKDFLLSIRGLGLKSVECVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLPESLQL 91
Query: 171 ----PGKTPNKVEQSLL---RIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+++ L + + Y HY ++ G+ C KP C SC + CK
Sbjct: 92 HLLEMYPMLEHIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNSCPMRAECK 151
Query: 224 RI 225
Sbjct: 152 HF 153
>gi|227497089|ref|ZP_03927338.1| possible A/G-specific adenine glycosylase [Actinomyces urogenitalis
DSM 15434]
gi|226833437|gb|EEH65820.1| possible A/G-specific adenine glycosylase [Actinomyces urogenitalis
DSM 15434]
Length = 162
Score = 53.0 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 5/137 (3%)
Query: 34 LKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + ++V+ ++S Q+ V A + + A
Sbjct: 18 DWYRAHARDLPWRHSGTSAYAVLVSEVMSQQTPVSRVVPAWQEWMRRWPDATALAAAQRA 77
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ +G R+ + + ++ ++P + L LPG+G A +L+ A+
Sbjct: 78 EVLLVWGRLGYPRRALRLVEAAR-AVVERHGGELPADRDQLLALPGVGDYTAGAVLAFAY 136
Query: 150 GIPTIGVDTHIFRISNR 166
G + +DT++ R+ R
Sbjct: 137 GRRALTLDTNVRRVLAR 153
>gi|153941116|ref|YP_001392139.1| hypothetical protein CLI_2913 [Clostridium botulinum F str.
Langeland]
gi|152937012|gb|ABS42510.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295320143|gb|ADG00521.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 265
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|309800489|ref|ZP_07694643.1| A/G-specific adenine glycosylase [Streptococcus infantis SK1302]
gi|308115884|gb|EFO53406.1| A/G-specific adenine glycosylase [Streptococcus infantis SK1302]
Length = 286
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN-- 165
+ + + +++EF+ K P T E ++ L GIG A I S+AF +P VD ++ R+
Sbjct: 1 MQTAAQQIMSEFEGKFPSTYESISSLKGIGPYTAGAISSIAFNLPQPAVDGNVMRVLARL 60
Query: 166 ---RIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
+ + + +I P + + L+ G + P+ + +
Sbjct: 61 FEVNHDIGNPSNRKIFQAMMEVLIDPDRPGDFNQALMDLGSDIEAPVNPRPEESPVKEFS 120
Query: 223 KRIK 226
+
Sbjct: 121 AAYQ 124
>gi|77798708|gb|ABB03501.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T Q + + +++ R +G Y +++N+ + I + E D++
Sbjct: 4 NTVVERFYSPFLKAFPTLQDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFRENTACVDANIKRALLRLFGLDSNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798710|gb|ABB03502.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T Q + + +++ R +G Y +++N+ + I + E D++
Sbjct: 4 NTVVERFYSPFLKAFPTLQDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|218190787|gb|EEC73214.1| hypothetical protein OsI_07297 [Oryza sativa Indica Group]
Length = 1165
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 20/174 (11%)
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+L + +K + + S+ + + + + +
Sbjct: 752 WDNLRKEVLRNHGNRQRSDKAKDTIDWEADFLNRLVRDHGSIDLEWLRDIE--PDKAKDF 809
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP---------------GKT 174
L + G+G K + + VDT++ RI R+G P
Sbjct: 810 LLSIRGLGLKSTECVRLLTLHQMAFPVDTNVARICVRLGWVPLQPLPESLQLHLLELYPM 869
Query: 175 PNKVEQSLLRIIPPKH---QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++ + + Y HY ++ G+ C KP C SC + CK
Sbjct: 870 LEHIQKYIWPRLCKLDQLILYELHYQMITFGKVFCSKSKPNCNSCPMRAECKHF 923
>gi|113205660|ref|NP_001037916.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
gi|89272695|emb|CAJ81414.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
Length = 472
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 55/178 (30%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + P + F+ P P+ + + + + L++A
Sbjct: 301 VEKRKTSPYFSRKAIKEALAPPKR----KAFTKWTP-PRSPFHLVQETLFHDPWKLLIAT 355
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ A + P+ A K++ ++ +G+Y +++ I+ S
Sbjct: 356 IFLNKTSGKMAIPALWQFLKKYPNPEVARAADWKEMAELLQPLGLYELRAKAIVRFSDEY 415
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 416 LTKKWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVQPQDHKLNFYHTWLWENH 466
>gi|182701994|ref|ZP_02619177.2| conserved hypothetical protein [Clostridium botulinum Bf]
gi|182672425|gb|EDT84386.1| conserved hypothetical protein [Clostridium botulinum Bf]
Length = 265
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVRSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|77798620|gb|ABB03457.1| MutY [Helicobacter pylori]
gi|77798676|gb|ABB03485.1| MutY [Helicobacter pylori]
gi|77798694|gb|ABB03494.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|297733838|emb|CBI15085.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V+++LS +TDVN +A L T Q +LA K ++N IR G+ K+ I +
Sbjct: 111 LVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVTKASCIKKM 170
Query: 112 SHILINEFDNKIPQTLEGLT---------RLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
L+ + L LT GIG K +L VDTH+ +
Sbjct: 171 LSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQ 230
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CK------ARKPQC 213
I IG P K L R IP + +++ + L HG+ C RK
Sbjct: 231 IGKAIGWVPAVADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESH 290
Query: 214 Q-SCIISNLC 222
+ SC + C
Sbjct: 291 ESSCPLLTYC 300
>gi|77798724|gb|ABB03509.1| MutY [Helicobacter pylori]
gi|77798732|gb|ABB03513.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + + +++ R +G Y +++N+ + I I E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|297806437|ref|XP_002871102.1| hypothetical protein ARALYDRAFT_487239 [Arabidopsis lyrata subsp.
lyrata]
gi|297316939|gb|EFH47361.1| hypothetical protein ARALYDRAFT_487239 [Arabidopsis lyrata subsp.
lyrata]
Length = 1997
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ Y HY L+ G+ C +P C +C + C+
Sbjct: 1617 LDQPTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHF 1656
>gi|296090400|emb|CBI40219.3| unnamed protein product [Vitis vinifera]
Length = 1621
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C KP C +C + C+
Sbjct: 1242 LDQRTLYELHYQLITFGKVFCTKHKPNCNACPMRGECRHF 1281
>gi|77798734|gb|ABB03514.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798626|gb|ABB03460.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + + T + + +++ R +G Y +++N+ + I I E ++++P
Sbjct: 6 VVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 65 NDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 125 EFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798618|gb|ABB03456.1| MutY [Helicobacter pylori]
gi|77798712|gb|ABB03503.1| MutY [Helicobacter pylori]
gi|77798716|gb|ABB03505.1| MutY [Helicobacter pylori]
gi|77798756|gb|ABB03525.1| MutY [Helicobacter pylori]
gi|77798762|gb|ABB03528.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +K+ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|322806326|emb|CBZ03894.1| endonuclease III [Clostridium botulinum H04402 065]
Length = 265
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 YIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|225457138|ref|XP_002283633.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 310
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V+++LS +TDVN +A L T Q +LA K ++N IR G+ K+ I +
Sbjct: 111 LVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVTKASCIKKM 170
Query: 112 SHILINEFDNKIPQTLEGLT---------RLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
L+ + L LT GIG K +L VDTH+ +
Sbjct: 171 LSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQ 230
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CK------ARKPQC 213
I IG P K L R IP + +++ + L HG+ C RK
Sbjct: 231 IGKAIGWVPAVADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESH 290
Query: 214 Q-SCIISNLC 222
+ SC + C
Sbjct: 291 ESSCPLLTYC 300
>gi|77798664|gb|ABB03479.1| MutY [Helicobacter pylori]
gi|77798704|gb|ABB03499.1| MutY [Helicobacter pylori]
gi|77798740|gb|ABB03517.1| MutY [Helicobacter pylori]
gi|77798742|gb|ABB03518.1| MutY [Helicobacter pylori]
gi|77798744|gb|ABB03519.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +K+ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|170756276|ref|YP_001782471.1| hypothetical protein CLD_1708 [Clostridium botulinum B1 str. Okra]
gi|169121488|gb|ACA45324.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 265
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|226949358|ref|YP_002804449.1| hypothetical protein CLM_2281 [Clostridium botulinum A2 str. Kyoto]
gi|226843447|gb|ACO86113.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 265
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|255580114|ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
gi|223529542|gb|EEF31495.1| conserved hypothetical protein [Ricinus communis]
Length = 1876
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C +P C +C + C+
Sbjct: 1502 LDQRTLYELHYQMITFGKVFCTKSRPNCNACPMRAECRHF 1541
>gi|322807176|emb|CBZ04750.1| endonuclease III [Clostridium botulinum H04402 065]
Length = 265
Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 YIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|170759708|ref|YP_001788183.1| hypothetical protein CLK_2254 [Clostridium botulinum A3 str. Loch
Maree]
gi|169406697|gb|ACA55108.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 265
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 NPLCDNCPISNLCER 255
>gi|21743571|gb|AAM77215.1| DEMETER protein [Arabidopsis thaliana]
Length = 1729
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C +P C +C + C+
Sbjct: 1351 LDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHF 1390
>gi|325830769|ref|ZP_08164153.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
gi|325487176|gb|EGC89619.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
Length = 294
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 6/169 (3%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+L + + + ++V+ ++ Q+ V K + T + A G + +
Sbjct: 36 HRDLPWRYIDDPYAVLVSEVMLQQTQVARVEKHWTRFLSLFPTIDSLAAAGTADVLAQWQ 95
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G R+ + + E +P T E L LPGIG A +++ A+ P++ +
Sbjct: 96 GLGYNRRALA-LKRAAETCSAERGGLLPDTAEELETLPGIGPATAAGVMAFAYNRPSVYI 154
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLL--RIIPPKHQYNAHYWLVLHGR 203
+T++ + + E + L P +Y L+ +G
Sbjct: 155 ETNVRTVFLHELFPDRDKVSDRELAPLVASTCPEDDARAWYYALLDYGA 203
>gi|257791024|ref|YP_003181630.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|317488260|ref|ZP_07946827.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
gi|257474921|gb|ACV55241.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|316912642|gb|EFV34184.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
Length = 291
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 6/169 (3%)
Query: 40 KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIR 96
+L + + + ++V+ ++ Q+ V K + T + A G + +
Sbjct: 33 HRDLPWRYIDDPYAVLVSEVMLQQTQVARVEKHWTRFLSLFPTIDSLAAAGTADVLAQWQ 92
Query: 97 TIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+G R+ + + E +P T E L LPGIG A +++ A+ P++ +
Sbjct: 93 GLGYNRRALA-LKRAAETCSAERGGLLPDTAEELETLPGIGPATAAGVMAFAYNRPSVYI 151
Query: 157 DTHIFRISNRIGLAPGKTPNKVEQSLL--RIIPPKHQYNAHYWLVLHGR 203
+T++ + + E + L P +Y L+ +G
Sbjct: 152 ETNVRTVFLHELFPDRDKVSDRELAPLVASTCPEDDARAWYYALLDYGA 200
>gi|30680560|ref|NP_196076.2| DME (DEMETER); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site)
lyase [Arabidopsis thaliana]
gi|332003377|gb|AED90760.1| transcriptional activator DEMETER [Arabidopsis thaliana]
Length = 1729
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C +P C +C + C+
Sbjct: 1351 LDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHF 1390
>gi|115683731|ref|XP_001200032.1| PREDICTED: similar to nth endonuclease III-like 1 (E. coli)
[Strongylocentrotus purpuratus]
Length = 297
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
P SL +P + LV G+ C P+C C+ ++C KQ
Sbjct: 224 PEATRVSLEDWLPRDLWSEVNVLLVGFGQQTCLPVGPRCLECLNKDICPLGKQ 276
>gi|297740062|emb|CBI30244.3| unnamed protein product [Vitis vinifera]
Length = 1470
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + C+
Sbjct: 1088 LDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1127
>gi|311269300|ref|XP_003132426.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Sus scrofa]
Length = 567
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 50/177 (28%), Gaps = 18/177 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L++A
Sbjct: 396 VEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 450
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ II S
Sbjct: 451 IFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDHRAKTIIKFSDEY 510
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
+ + L GIG+ G + L
Sbjct: 511 LTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWEN 560
>gi|77798728|gb|ABB03511.1| MutY [Helicobacter pylori]
gi|77798730|gb|ABB03512.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +K+ R +G Y +++N+ + I I E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLADAPLEKVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|77798644|gb|ABB03469.1| MutY [Helicobacter pylori]
gi|77798722|gb|ABB03508.1| MutY [Helicobacter pylori]
Length = 152
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +K+ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|255074589|ref|XP_002500969.1| predicted protein [Micromonas sp. RCC299]
gi|226516232|gb|ACO62227.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+V +LS +TD N ++A L T +++ K+++ IR G+ K
Sbjct: 47 KTVLDSLVGTILSQNTTDTNSHRAFAILKHRFPTWEQVRTAKPAKVEDAIRCGGLAEVKV 106
Query: 106 ENII---------SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
I + D L+R G+G K + +L P V
Sbjct: 107 SRIQVILNTLKEERGECSMEYLRDMSDDDVKAELSRFKGVGPKTVSCVLMFCLKRPDFPV 166
Query: 157 DTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
DTH+++I+ +G P G + L R +P +++ H LV HG+
Sbjct: 167 DTHVWKIAKDLGWIPKGAGREDAYEHLNRRVPDDCKFDLHVLLVEHGKVY 216
>gi|48716531|dbj|BAD23135.1| putative transcriptional activator DEMETER [Oryza sativa Japonica
Group]
Length = 1552
Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 20/174 (11%)
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+L + +K + + S+ + + + +
Sbjct: 1199 WDNLRKEVLHNHGNRQRSDKAKDTIDWEADFLNRLVRDHGSIDLEWLRDIE--PDKAKGF 1256
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK------------ 177
L + G+G K + + VDT++ RI R+G P + +
Sbjct: 1257 LLSIRGLGLKSTECVRLLTLHQMAFPVDTNVARICVRLGWVPLQPLPESLQLHLLELYPL 1316
Query: 178 ---VEQSLLRIIPPKH---QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++ + + Y HY ++ G+ C KP C SC + CK
Sbjct: 1317 LEHIQKYIWPRLCKLDQLILYELHYQMITFGKVFCSKSKPNCNSCPMRAECKHF 1370
>gi|115446213|ref|NP_001046886.1| Os02g0494700 [Oryza sativa Japonica Group]
gi|113536417|dbj|BAF08800.1| Os02g0494700 [Oryza sativa Japonica Group]
Length = 1648
Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 20/174 (11%)
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+L + +K + + S+ + + + +
Sbjct: 1223 WDNLRKEVLHNHGNRQRSDKAKDTIDWEADFLNRLVRDHGSIDLEWLRDIE--PDKAKGF 1280
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK------------ 177
L + G+G K + + VDT++ RI R+G P + +
Sbjct: 1281 LLSIRGLGLKSTECVRLLTLHQMAFPVDTNVARICVRLGWVPLQPLPESLQLHLLELYPL 1340
Query: 178 ---VEQSLLRIIPPKH---QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++ + + Y HY ++ G+ C KP C SC + CK
Sbjct: 1341 LEHIQKYIWPRLCKLDQLILYELHYQMITFGKVFCSKSKPNCNSCPMRAECKHF 1394
>gi|255573046|ref|XP_002527453.1| conserved hypothetical protein [Ricinus communis]
gi|223533188|gb|EEF34945.1| conserved hypothetical protein [Ricinus communis]
Length = 1712
Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ K Y HY ++ G+ C KP C C + C+ +
Sbjct: 1328 LDQKTLYELHYQMITFGKVFCTKLKPNCGVCPMRAECRHL 1367
>gi|222622896|gb|EEE57028.1| hypothetical protein OsJ_06806 [Oryza sativa Japonica Group]
Length = 1615
Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 20/174 (11%)
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+L + +K + + S+ + + + +
Sbjct: 1202 WDNLRKEVLHNHGNRQRSDKAKDTIDWEADFLNRLVRDHGSIDLEWLRDIE--PDKAKGF 1259
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK------------ 177
L + G+G K + + VDT++ RI R+G P + +
Sbjct: 1260 LLSIRGLGLKSTECVRLLTLHQMAFPVDTNVARICVRLGWVPLQPLPESLQLHLLELYPL 1319
Query: 178 ---VEQSLLRIIPPKH---QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+++ + + Y HY ++ G+ C KP C SC + CK
Sbjct: 1320 LEHIQKYIWPRLCKLDQLILYELHYQMITFGKVFCSKSKPNCNSCPMRAECKHF 1373
>gi|77798672|gb|ABB03483.1| MutY [Helicobacter pylori]
gi|77798674|gb|ABB03484.1| MutY [Helicobacter pylori]
gi|77798706|gb|ABB03500.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.8 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ + + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVIERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ P +N + L+ G +C KP+
Sbjct: 123 ANDFLNPNESFNHNQALIDLGALICSP-KPK 152
>gi|77798766|gb|ABB03530.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.8 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + + T + + +++ R +G Y +++N+ + I + E ++++P
Sbjct: 6 VVERFYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD +I R + GL P ++
Sbjct: 65 NDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIHAKDLQIKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 125 EFLNLNDSFNHNQALIDLGALICSP-KPK 152
>gi|330900956|gb|EGH32375.1| A/G-specific adenine glycosylase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 180
Score = 51.8 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 10/170 (5%)
Query: 34 LKWPSP-KGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ + +L + + + V+ ++ Q+ V E + Q + E
Sbjct: 12 DWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPSVQALAEAPED 71
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ + +G Y ++ N+ + I++ + + P+ +E L LPGIG A I S++
Sbjct: 72 EVLHLWTGLGYYT-RARNLQKTAKIVVADHGGEFPRDVEKLILLPGIGLSTAGAIASLSM 130
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKT-----PNKVEQSLLRIIPPKHQYNA 194
GI +D ++ R+ R G ++ + R P N
Sbjct: 131 GIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNY 180
>gi|149035566|gb|EDL90247.1| mutY homolog (E. coli), isoform CRA_d [Rattus norvegicus]
Length = 262
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 45/161 (27%), Gaps = 11/161 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRRNLLSWYDQEKRDLPWRKRVKEEANLDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ T Q + + +++ +G Y + ++ +
Sbjct: 122 RWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQ 181
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
LPG+GR A I S+AF + G
Sbjct: 182 LLPGVGRYTAGAIASIAFDQGLSPAAGGPSPAWGFQPSSHG 222
>gi|70607031|ref|YP_255901.1| endonuclease III related protein [Sulfolobus acidocaldarius DSM
639]
gi|68567679|gb|AAY80608.1| endonuclease III related protein [Sulfolobus acidocaldarius DSM
639]
Length = 238
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 19/218 (8%)
Query: 24 ELEEIFYLFSLKW------------PSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKAT 70
EEIF + PS ++V+ +L + V +
Sbjct: 14 RTEEIFLILEKNKDLLSNVGWIVSDPSSPRWWDGLETIDDILVSSILVQLTRWETVREVL 73
Query: 71 KHLFEI-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
K L E + + ++ E +++ I+ + R K++ + +L+ ++ +++ + E
Sbjct: 74 KKLKERGIRRIEDLASLEESEIEELIKKVNFRRAKAKRLKNLAMLVKEIGIHRLVVSPEL 133
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
L+ + GIG + IL A IP + R+ +R+ + + L I
Sbjct: 134 LSNIEGIGDETKEAILLFAGNIPLFPRSEYSKRVLSRLAGIRLSKNDA--RLLGEYICGH 191
Query: 190 HQYN---AHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
Y H +V G+ C + P+C SCI +CK
Sbjct: 192 DLYKIKLFHAGIVSVGKSFCSNQNPKCNSCIFKEICKY 229
>gi|259483988|tpe|CBF79828.1| TPA: DNA repair protein Ntg1, putative (AFU_orthologue;
AFUA_2G01120) [Aspergillus nidulans FGSC A4]
Length = 429
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 99/286 (34%), Gaps = 77/286 (26%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH----F 49
V ++K + G+ + + I P+ ELY+ + F
Sbjct: 121 VPARKVKNEDGSFTVEAPSNWDAIYSIVKKMREDNPTAPVDTMGCAELYWRASSPRDRRF 180
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK------------------- 90
++A++LS+Q+ D A + L E +
Sbjct: 181 QTLIALMLSSQTKDTVTAVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENGEPAIKQ 240
Query: 91 -----------------------------LQNYIRTIGIYRKKSENIISLSHILINEFDN 121
L + I T+G + K++ I + I+ +++++
Sbjct: 241 EAKDGVPPANPSHDSTLNLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEIIRDQYNS 300
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQ 180
IP T L +LPG+G K A + +S A+G VD H+ RI+N G KTP +
Sbjct: 301 DIPSTPAELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWHKTKTPEETRM 360
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
SL +P + + K +C C ++ LCK
Sbjct: 361 SLESWLPKDKWHEIN--------------KLRCGDCGLAGTKLCKS 392
>gi|153217963|ref|ZP_01951450.1| A/G-specific adenine glycosylase [Vibrio cholerae 1587]
gi|124113285|gb|EAY32105.1| A/G-specific adenine glycosylase [Vibrio cholerae 1587]
Length = 172
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N + + ++ ++ Q+ V + E T + A + ++ ++ +G Y ++
Sbjct: 26 KNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYA-RA 84
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
N+ + ++++E+ + P LE + LPG+GR A +LS + P +D ++ R
Sbjct: 85 RNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLA 144
Query: 166 RIGLAPGKTPNK 177
R G K
Sbjct: 145 RCFAVEGWPGQK 156
>gi|329888145|ref|ZP_08266743.1| iron-sulfur binding domain of endonuclease III family protein
[Brevundimonas diminuta ATCC 11568]
gi|328846701|gb|EGF96263.1| iron-sulfur binding domain of endonuclease III family protein
[Brevundimonas diminuta ATCC 11568]
Length = 152
Score = 51.4 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIK 226
+ G VC+ R P C C ++ C+ +K
Sbjct: 1 MDLGSGVCRPRSPLCDQCPLAFGCEALK 28
>gi|77798738|gb|ABB03516.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.4 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANDFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|291393500|ref|XP_002713197.1| PREDICTED: methyl-CpG binding domain protein 4 [Oryctolagus
cuniculus]
Length = 561
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 390 IERRKTSLYFSSKYNKAALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 444
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + A + + ++ +G+Y +++ II S
Sbjct: 445 IFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEY 504
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 505 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 555
>gi|77798622|gb|ABB03458.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANDFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|260818113|ref|XP_002603929.1| hypothetical protein BRAFLDRAFT_248552 [Branchiostoma floridae]
gi|229289253|gb|EEN59940.1| hypothetical protein BRAFLDRAFT_248552 [Branchiostoma floridae]
Length = 161
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 10/150 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNKATKH 72
++ + + K +L + + + V+ ++ Q+ V
Sbjct: 7 DDIPTLRSSLLSWYDINKRDLPWRRQLKNTDMNQRAYAVWVSEMMLQQTQVATVIDYYDR 66
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR 132
E T QK+ +++ +G Y + ++ L
Sbjct: 67 WLEKWPTVQKLATATLEEVNEMWSGLGYYSRGRRLHEGAQKVVKELDGQMPSSAASLLKE 126
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
LPG+GR A I S+A+ +
Sbjct: 127 LPGVGRYTAGAIASIAYSQVSSYTQKFFNS 156
>gi|255030780|ref|ZP_05302731.1| endonuclease III (DNA repair) [Listeria monocytogenes LO28]
Length = 87
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+ T LFE
Sbjct: 1 MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYH 60
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKK 104
+P+ LA+ ++L IR+IG+YR K
Sbjct: 61 SPEDYLAVPLEELMEDIRSIGLYRNK 86
>gi|194381152|dbj|BAG64144.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L GIG+ G + T I
Sbjct: 524 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVRLTPIH 562
>gi|77798616|gb|ABB03455.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +K+ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLADAPLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P +++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANEFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|148380027|ref|YP_001254568.1| hypothetical protein CBO2070 [Clostridium botulinum A str. ATCC
3502]
gi|148289511|emb|CAL83609.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
Length = 258
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 175 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 233
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 234 SPLCDNCPISNLCER 248
>gi|213586442|ref|ZP_03368268.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 40
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 193 NAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ H+WL+LHGRY C ARKP+C SC+I +LC+ ++
Sbjct: 3 DCHHWLILHGRYTCIARKPRCGSCLIEDLCEYKEK 37
>gi|153933853|ref|YP_001384324.1| hypothetical protein CLB_2008 [Clostridium botulinum A str. ATCC
19397]
gi|153936967|ref|YP_001387861.1| hypothetical protein CLC_2013 [Clostridium botulinum A str. Hall]
gi|152929897|gb|ABS35397.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152932881|gb|ABS38380.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 265
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKAR 209
I I D H+ R+ RIGL T +V + ++I P + + GR C+
Sbjct: 182 HIIDIAYDIHVRRVFLRIGLVKSDTLEQV-TEVAKLIYPDFPGKLTTPIWVIGREYCRPT 240
Query: 210 KPQCQSCIISNLCKR 224
P C +C ISNLC+R
Sbjct: 241 SPLCDNCPISNLCER 255
>gi|126459677|ref|YP_001055955.1| iron-sulfur cluster loop containing protein [Pyrobaculum
calidifontis JCM 11548]
gi|126249398|gb|ABO08489.1| iron-sulfur cluster loop containing protein [Pyrobaculum
calidifontis JCM 11548]
Length = 298
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C +P C C + +CK K
Sbjct: 257 FGRTICTRERPNCGQCPLREVCKAHK 282
>gi|224113515|ref|XP_002316517.1| DNA glycosylase [Populus trichocarpa]
gi|222865557|gb|EEF02688.1| DNA glycosylase [Populus trichocarpa]
Length = 519
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C +P C +C + C+
Sbjct: 139 LDQRTLYELHYQMITFGKVFCTKSRPNCNACPMRAECRHF 178
>gi|156743271|ref|YP_001433400.1| HhH-GPD family protein [Roseiflexus castenholzii DSM 13941]
gi|156234599|gb|ABU59382.1| HhH-GPD family protein [Roseiflexus castenholzii DSM 13941]
Length = 297
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 81/260 (31%), Gaps = 59/260 (22%)
Query: 23 KELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+ L F + F ++V +L Q+ V A L +
Sbjct: 9 ERLLACFAALDEHFGHEPHWWPVISDDPPFEVLVGAVLVQQTRWETVEAAIVRLRDAGLM 68
Query: 80 PQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ--------TLEGL 130
LA L IR + +K+ + ++ ++ ++D + L
Sbjct: 69 SPSALAAARPDRLAALIRPCAFHAQKATGLHAICGAIVQQYDCTTTRLLSGERAEVRARL 128
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---------VEQS 181
LP IGR+ A+ ++ G P VD + R+ R+ L PG + +E++
Sbjct: 129 LALPRIGRETADTVMLYGGGHPVFVVDAYARRLFARLDLVPGFDFLRAPYVAVQHLIERA 188
Query: 182 LLRIIP----------------------PKHQYNAHYWLVLHGRYVCKARKPQCQS---- 215
L +P + H ++ + C AR P+C
Sbjct: 189 LSPFLPALATIAGEPFHVHRAVETNGNGAFFFAHFHALIIEACVHHCLARNPRCDRPGGQ 248
Query: 216 ------------CIISNLCK 223
C++ + C
Sbjct: 249 RAFIDRRKCANHCLMCDGCP 268
>gi|332711342|ref|ZP_08431274.1| mutator mutT protein [Lyngbya majuscula 3L]
gi|332349891|gb|EGJ29499.1| mutator mutT protein [Lyngbya majuscula 3L]
Length = 173
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C + P C C + C+
Sbjct: 1 MDLGATICTRKTPNCPDCPWKSYCQAY 27
>gi|115464171|ref|NP_001055685.1| Os05g0445900 [Oryza sativa Japonica Group]
gi|113579236|dbj|BAF17599.1| Os05g0445900 [Oryza sativa Japonica Group]
Length = 473
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C KP C +C + + C+
Sbjct: 87 LDQQTLYELHYQMITFGKVFCTKSKPNCNACPMRSECRHF 126
>gi|77798748|gb|ABB03521.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R + GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANDFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798684|gb|ABB03489.1| MutY [Helicobacter pylori]
gi|77798714|gb|ABB03504.1| MutY [Helicobacter pylori]
Length = 152
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I E +++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANDFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|261884640|ref|ZP_06008679.1| endonuclease III [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 50
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
H +VL GRY CKA KPQC++C + LC
Sbjct: 9 KTELNTLHQAMVLFGRYTCKALKPQCENCFLKELCSS 45
>gi|126336437|ref|XP_001376329.1| PREDICTED: similar to methyl-CpG binding protein MBD4 [Monodelphis
domestica]
Length = 294
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y N +P KW P+ + + + L++A
Sbjct: 123 VEKRKTSQYFSNKYNKEALSPPR-----RKLFKKWTPPRSPFNLVQETLFHDPWKLLIAT 177
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + K++ ++ +G+Y +++ II S
Sbjct: 178 IFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWKEVSELLKPLGLYDLRAKTIIKFSDEY 237
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 238 LTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 288
>gi|332797164|ref|YP_004458664.1| HhH-GPD family protein [Acidianus hospitalis W1]
gi|332694899|gb|AEE94366.1| HhH-GPD family protein [Acidianus hospitalis W1]
Length = 207
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 8/185 (4%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++ L + V K ++L + K+ + L++ IR++ Y+ K+ +
Sbjct: 22 EIAISAFLVQMTKWETVAKVIENLRRKGLNYIDKIAELPLPVLEDQIRSVNFYKTKARRL 81
Query: 109 ISLSHILINE---FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+ S I+ + + + + GIG + A+ +L A ++ R+ +
Sbjct: 82 KNFSEIVSKNGGLKKFLTVENRDKILEIEGIGEETADSLLLFANNQLVFPQSEYLRRVLS 141
Query: 166 RIGLAPGKTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
R+ L + + + + + H +V G+ C KP+C CI+ LC+
Sbjct: 142 RV-LNKKMSKKEAKDYVEDNLKKDLFLYKLFHAGIVSIGKAFCYLNKPKCDKCILKPLCR 200
Query: 224 -RIKQ 227
+ +
Sbjct: 201 NKYNE 205
>gi|114589109|ref|XP_001144022.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 6 [Pan
troglodytes]
Length = 572
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L GIG+ G + T I
Sbjct: 524 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVRLTPIH 562
>gi|310800884|gb|EFQ35777.1| base excision DNA repair protein [Glomerella graminicola M1.001]
Length = 389
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 35/258 (13%)
Query: 2 VSSKKSDSY-----QGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV---------- 46
+ SKK +Y + P TP E + + +
Sbjct: 120 LKSKKLKAYSQYADKSPFPDFAHPTPDECRLAHRILAELHGKRERPAEVKASATRAGCGD 179
Query: 47 --NHFTLIVAVLLSAQSTDVN---VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
+ +V +LS ++D N ++ ++ +D +K++ G KLQ I+ G+
Sbjct: 180 SPSVLDALVRTILSQNTSDTNSTRAKRSMDAVYGGSDEWEKIVEGGVHKLQEAIKCGGLS 239
Query: 102 RKKSENIISLSHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIP 152
+ KS+ II + + + ++ + ++ L G+G K A+ +L
Sbjct: 240 QVKSKVIIGILNQVKEKYGSYTLDHLFNATNEEAMQELISFQGVGPKTASCVLLFCLQRE 299
Query: 153 TIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKAR 209
+ VDTH++RI+ +G + ++ L IP + +Y H LV HG+ CKA
Sbjct: 300 SFAVDTHVWRITGLLGWRPKSASRDETHAHLDVRIPDEDKYGLHILLVKHGKVCDECKAG 359
Query: 210 KPQCQSCIISNLCKRIKQ 227
C + K +Q
Sbjct: 360 GKSIGKCELR---KAFRQ 374
>gi|149728428|ref|XP_001490372.1| PREDICTED: methyl-CpG binding domain protein 4 [Equus caballus]
Length = 592
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 48/176 (27%), Gaps = 18/176 (10%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAVLL 57
+K+ Y +P F P P+ + + + L++A +
Sbjct: 423 KRKTSLYFSRKYNKEGLSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIATIF 477
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
+++ E + + + + ++ +G+Y +++ II S +
Sbjct: 478 LNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIRFSDEYLT 537
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ L GIG+ G + L
Sbjct: 538 KQWRYP-------IELHGIGKYGNDSYRIFCINEWKQVHPEDHKLNKYHDWLWENH 586
>gi|255024755|ref|ZP_05296741.1| A/G-specific adenine glycosylase [Listeria monocytogenes FSL
J1-208]
Length = 96
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ ++ + + K L + + + + V+ ++ Q+ V
Sbjct: 9 WDETKITAFQEALVSWYGANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRFMTQ 68
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRK 103
T + + E + +G Y +
Sbjct: 69 FPTMEDFVQADEADILKAWEGLGYYSR 95
>gi|114589111|ref|XP_001143958.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 5 [Pan
troglodytes]
Length = 566
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 403 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 457
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 458 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 517
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L GIG+ G + T I
Sbjct: 518 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVRLTPIH 556
>gi|77798700|gb|ABB03497.1| MutY [Helicobacter pylori]
gi|77798702|gb|ABB03498.1| MutY [Helicobacter pylori]
Length = 152
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
V + E T + + +++ + R +G Y +++N+ + I + E +++P
Sbjct: 6 VVERFYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQLP 64
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLL 183
+ L +LPGIG AN IL F T VD ++ R+ GL P ++
Sbjct: 65 NDYQSLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKAN 124
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 125 DFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|4505121|ref|NP_003916.1| methyl-CpG-binding domain protein 4 [Homo sapiens]
gi|50400819|sp|O95243|MBD4_HUMAN RecName: Full=Methyl-CpG-binding domain protein 4; AltName:
Full=Methyl-CpG-binding endonuclease 1; AltName:
Full=Methyl-CpG-binding protein MBD4; AltName:
Full=Mismatch-specific DNA N-glycosylase
gi|4539759|gb|AAD22195.1|AF114784_1 methyl-CpG binding endonuclease [Homo sapiens]
gi|19852107|gb|AAM00008.1|AF494057_1 methyl-CpG binding domain protein 4 [Homo sapiens]
gi|3800809|gb|AAC68879.1| methyl-CpG binding protein MBD4 [Homo sapiens]
gi|5739194|gb|AAD50374.1| methyl-CpG binding protein 4 [Homo sapiens]
gi|119599659|gb|EAW79253.1| methyl-CpG binding domain protein 4, isoform CRA_c [Homo sapiens]
gi|119599660|gb|EAW79254.1| methyl-CpG binding domain protein 4, isoform CRA_c [Homo sapiens]
Length = 580
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 524 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 574
>gi|15079922|gb|AAH11752.1| MBD4 protein [Homo sapiens]
gi|47496557|emb|CAG29301.1| MBD4 [Homo sapiens]
gi|119599657|gb|EAW79251.1| methyl-CpG binding domain protein 4, isoform CRA_a [Homo sapiens]
gi|119599661|gb|EAW79255.1| methyl-CpG binding domain protein 4, isoform CRA_a [Homo sapiens]
gi|325463337|gb|ADZ15439.1| methyl-CpG binding domain protein 4 [synthetic construct]
Length = 574
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 403 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 457
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 458 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 517
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 518 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 568
>gi|77798634|gb|ABB03464.1| MutY [Helicobacter pylori]
Length = 152
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + T + + +++ + R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLKAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANDFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|197098838|ref|NP_001127160.1| methyl-CpG-binding domain protein 4 [Pongo abelii]
gi|55725306|emb|CAH89518.1| hypothetical protein [Pongo abelii]
Length = 573
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 402 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLIQETLFHDPWKLLIAT 456
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 457 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 516
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 517 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 567
>gi|77798692|gb|ABB03493.1| MutY [Helicobacter pylori]
gi|77798698|gb|ABB03496.1| MutY [Helicobacter pylori]
gi|77798718|gb|ABB03506.1| MutY [Helicobacter pylori]
gi|77798720|gb|ABB03507.1| MutY [Helicobacter pylori]
Length = 152
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD +I R+ GL P ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANGFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|77798686|gb|ABB03490.1| MutY [Helicobacter pylori]
Length = 152
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQS 181
+P + L +LPGIG AN IL F + VD +I R+ R+ P K ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIPAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANGFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|115605725|gb|ABJ15844.1| MutY [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693128|emb|CAL88868.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|296225951|ref|XP_002758735.1| PREDICTED: methyl-CpG-binding domain protein 4 [Callithrix jacchus]
Length = 558
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 18/164 (10%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAVLL 57
+K+ Y +P +F P P+ + + + L++A +
Sbjct: 397 RRKTSLYFSRKYNKEALSPPRR----KVFKKWTP-PRSPFNLVQETLFHDPWKLLIATIF 451
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
+++ E + + + + ++ +G+Y +++ I+ S +
Sbjct: 452 LNRTSGKMAIPVLWKFLEKYPSAEVARNADWRDVSELLKPLGLYDLRAKTIVKFSDEYLT 511
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L GIG+ G + T I
Sbjct: 512 KQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVSPTPIH 548
>gi|122692840|emb|CAL88723.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693432|emb|CAL89219.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|195645374|gb|ACG42155.1| ROS1 protein [Zea mays]
gi|219887377|gb|ACL54063.1| unknown [Zea mays]
Length = 276
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V LLS +TD +A L + +++ K+L++ IR G+ K+ I S+
Sbjct: 79 LVTTLLSQNTTDAISRRAFASLKAAFPSWDQVVDEEGKRLEDAIRCGGLAATKAARIRSM 138
Query: 112 SHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ + + L+R GIG K +L VDTH+ R
Sbjct: 139 LRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVACVLMFYLQKDDFPVDTHVLR 198
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CK------ARKPQC 213
I+ +G P + K L IP +++ + V HG+ C RK
Sbjct: 199 ITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTHGKLCQSCTKKVGSDKRKSSN 258
Query: 214 QSCIISNLC 222
+C ++ C
Sbjct: 259 SACPLAGYC 267
>gi|122694022|emb|CAL89316.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692934|emb|CAL88770.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQMKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692892|emb|CAL88749.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692874|emb|CAL88740.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQMKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|77798688|gb|ABB03491.1| MutY [Helicobacter pylori]
Length = 152
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + + +++ R +G Y +++N+ + I + E ++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F T VD +I R+ GL P T ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQSK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANGFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|323306155|gb|EGA59887.1| Ntg1p [Saccharomyces cerevisiae FostersB]
Length = 249
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGIYRKKSE 106
+LS+Q+ D A ++ + L I ++G + +K++
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISN 165
I+S IL ++F + +P T+ L LPG+G K A + L A+G I VD H+ R++
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLXLPGVGPKMAYLTLQKAWGKIEGICVDVHVDRLTK 120
Query: 166 RIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
KTP++ L +P + LV G+ + K+R
Sbjct: 121 LWKWVDXQKCKTPDQTRTQLQNWLPKGLWTEINXLLVGFGQIITKSRN 168
>gi|2911056|emb|CAA17566.1| hypothetical protein [Arabidopsis thaliana]
gi|7270355|emb|CAB80123.1| hypothetical protein [Arabidopsis thaliana]
Length = 917
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C P C +C + + CK
Sbjct: 656 YELHYQMITFGKVFCTKTIPNCNACPMKSECKYF 689
>gi|122692990|emb|CAL88798.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693708|emb|CAL89157.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805360|gb|ADE41810.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|227904080|ref|ZP_04021885.1| hypothetical DNA-(apurinic or apyrimidinic site) lyase
[Lactobacillus acidophilus ATCC 4796]
gi|227868099|gb|EEJ75520.1| hypothetical DNA-(apurinic or apyrimidinic site) lyase
[Lactobacillus acidophilus ATCC 4796]
Length = 93
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPK 189
LPG+G K ANV+L+ +G+P I VDTH+ RIS + + TP++VEQ L I+P
Sbjct: 1 MTLPGVGEKTANVVLAEGYGVPAIAVDTHVSRISKKFHIVGQNATPHEVEQRLEAILPKD 60
Query: 190 HQYNAHYWLVLHGRYVCKAR 209
H+ ++L GRY +R
Sbjct: 61 EWIKTHHAMILFGRYTMPSR 80
>gi|224100667|ref|XP_002311968.1| predicted protein [Populus trichocarpa]
gi|222851788|gb|EEE89335.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY ++ G+ C +P C +C + C+
Sbjct: 38 LDQRTLYELHYQMITFGKVFCTKSRPNCNACPMRAECRHF 77
>gi|4467643|emb|CAB37773.1| MutY protein [Helicobacter pylori]
gi|122694095|emb|CAL89353.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692914|emb|CAL88760.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692948|emb|CAL88777.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|332231795|ref|XP_003265080.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 2 [Nomascus
leucogenys]
Length = 578
Score = 49.9 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 407 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLIQETLFHDPWKLLIAT 461
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 462 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 521
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 522 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 572
>gi|114589101|ref|XP_001144095.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 7 [Pan
troglodytes]
Length = 580
Score = 49.9 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 524 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 574
>gi|322708253|gb|EFY99830.1| base excision DNA repair protein [Metarhizium anisopliae ARSEF 23]
Length = 364
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 33/233 (14%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH------------FTLIVAVL 56
S + P T +E + + + V +V +
Sbjct: 99 SKKSPYPDFARPTAEECRAAHKILAKRHGERLRPEEVVAPTNAAGCGDSPSVLDALVRTI 158
Query: 57 LSAQSTDVNVNKATKHLFEIA---DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
LS +++ N +A + E D +++ G+ +L+ I+T G+ KS+ II +
Sbjct: 159 LSQNTSNKNSTRAKLSMDEEYGGSDKWEEIANGGQARLEKSIQTGGLAATKSKVIIGILQ 218
Query: 114 ILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ ++ + G+G K A+ +L P+ VDTH+ RI+
Sbjct: 219 QTKAKYGLYSLDHLFEASDEDAMKEMISFQGVGPKTASCVLLFCLQRPSFAVDTHVHRIT 278
Query: 165 NRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+G + + L ++P + +Y H V HGR QC+ C
Sbjct: 279 GLLGWRPAAAGREETQAHLDAVVPDEEKYPLHVLFVTHGR--------QCEEC 323
>gi|114589103|ref|XP_001144176.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 8 [Pan
troglodytes]
gi|332817878|ref|XP_003310052.1| PREDICTED: methyl-CpG-binding domain protein 4 [Pan troglodytes]
Length = 574
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 403 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 457
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 458 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 517
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 518 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 568
>gi|332231793|ref|XP_003265079.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 1 [Nomascus
leucogenys]
Length = 572
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 401 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLIQETLFHDPWKLLIAT 455
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 456 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 515
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 516 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 566
>gi|289441018|ref|ZP_06430762.1| putative adenine glycosylase [Mycobacterium tuberculosis T46]
gi|289413937|gb|EFD11177.1| putative adenine glycosylase [Mycobacterium tuberculosis T46]
Length = 197
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 41/116 (35%), Gaps = 5/116 (4%)
Query: 32 FSLKWPSPKGELYYV----NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ +L + + + ++V+ + Q+ V TP
Sbjct: 21 LLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATAS 80
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ +G ++++ + + ++ + ++ +P +E L LPG+G A
Sbjct: 81 TADVLRAWGKLGY-PRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARA 135
>gi|122693982|emb|CAL89296.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692798|emb|CAL88702.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693452|emb|CAL89029.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693992|emb|CAL89301.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692898|emb|CAL88752.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQMKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693620|emb|CAL89113.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
++ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKVFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKNACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693396|emb|CAL89003.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693536|emb|CAL89071.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693546|emb|CAL89076.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805270|gb|ADE41765.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693684|emb|CAL89145.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNDSFNHNQALIDLGALICSP 140
>gi|85813718|emb|CAJ55826.1| putative methyl-CpG binding protein [Homo sapiens]
Length = 262
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 91 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 145
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 146 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 205
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 206 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 256
>gi|122692666|emb|CAL88635.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805366|gb|ADE41813.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805276|gb|ADE41768.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693780|emb|CAL89193.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693806|emb|CAL89206.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805504|gb|ADE41882.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693748|emb|CAL89177.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693754|emb|CAL89180.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693850|emb|CAL89230.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317452255|emb|CBL87710.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805482|gb|ADE41871.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + ++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLDEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693960|emb|CAL89285.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693598|emb|CAL89102.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693630|emb|CAL89118.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLELPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|114589113|ref|XP_001143718.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 2 [Pan
troglodytes]
Length = 535
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 18/166 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 372 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 426
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 427 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 486
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L GIG+ G + T I
Sbjct: 487 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVRLTPIH 525
>gi|99906184|gb|ABF68689.1| MutY [Helicobacter pylori]
gi|99906190|gb|ABF68692.1| MutY [Helicobacter pylori]
gi|122692672|emb|CAL88638.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693345|emb|CAL88977.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693363|emb|CAL88986.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693528|emb|CAL89067.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693648|emb|CAL89127.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693660|emb|CAL89133.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693668|emb|CAL89137.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693792|emb|CAL89199.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693796|emb|CAL89201.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693834|emb|CAL89222.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805326|gb|ADE41793.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805516|gb|ADE41888.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452259|emb|CBL87712.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|18075341|emb|CAD11066.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694067|emb|CAL89339.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805244|gb|ADE41752.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693456|emb|CAL89031.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693560|emb|CAL89083.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693150|emb|CAL88879.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRGLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692694|emb|CAL88650.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693283|emb|CAL88946.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693534|emb|CAL89070.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693542|emb|CAL89074.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693568|emb|CAL89087.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693610|emb|CAL89108.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693636|emb|CAL89121.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693676|emb|CAL89141.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693698|emb|CAL89152.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|153820544|ref|ZP_01973211.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase) [Vibrio
cholerae NCTC 8457]
gi|126508911|gb|EAZ71505.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase) [Vibrio
cholerae NCTC 8457]
Length = 39
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
H+WL+LHGRY C ARKP+C SCII +LC+ +
Sbjct: 2 HHWLILHGRYTCVARKPRCGSCIIEDLCEFKDK 34
>gi|122692868|emb|CAL88737.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692932|emb|CAL88769.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|99906166|gb|ABF68680.1| MutY [Helicobacter pylori]
gi|99906168|gb|ABF68681.1| MutY [Helicobacter pylori]
gi|122693000|emb|CAL88803.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693022|emb|CAL88814.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693154|emb|CAL88881.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693219|emb|CAL88914.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693361|emb|CAL88985.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693458|emb|CAL89032.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693554|emb|CAL89080.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693606|emb|CAL89106.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693656|emb|CAL89131.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693718|emb|CAL89162.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693720|emb|CAL89163.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693740|emb|CAL89173.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693814|emb|CAL89210.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693832|emb|CAL89221.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693840|emb|CAL89225.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694111|emb|CAL89361.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255332|gb|ACS88650.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255334|gb|ACS88651.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805264|gb|ADE41762.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805298|gb|ADE41779.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805304|gb|ADE41782.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805316|gb|ADE41788.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805362|gb|ADE41811.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805370|gb|ADE41815.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805384|gb|ADE41822.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805392|gb|ADE41826.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805398|gb|ADE41829.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805406|gb|ADE41833.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805454|gb|ADE41857.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805474|gb|ADE41867.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805478|gb|ADE41869.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805488|gb|ADE41874.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452205|emb|CBL87685.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452225|emb|CBL87695.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693369|emb|CAL88989.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRKKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317418205|emb|CBM95516.1| A/G-specific adenine glycosylase [Helicobacter cetorum]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYFPFLQAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPG+G AN IL F T VD +I R+ L + ++ +
Sbjct: 60 SLIKLPGVGAYTANAILCFGFRENTACVDANIKRVLLRLFSLNLDTSTKDLQTKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
K +N + L+ G VC
Sbjct: 120 LKESFNHNQALIDLGALVCTP 140
>gi|254773522|ref|ZP_05215038.1| putative A/G-specific adenine glycosylase [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 124
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 22/81 (27%), Gaps = 4/81 (4%)
Query: 32 FSLKWPSPKGELYYVNH----FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + +L + + ++V+ + Q+ V TP A
Sbjct: 17 LLEWYRVARRDLPWRAPGVSAWQILVSEFMLQQTPVSRVLPIWPDWVRRWPTPSATAAAS 76
Query: 88 EKKLQNYIRTIGIYRKKSENI 108
+ +G R+
Sbjct: 77 AADVLRAWGKLGYPRRAKRLH 97
>gi|292805340|gb|ADE41800.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692920|emb|CAL88763.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692978|emb|CAL88792.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692992|emb|CAL88799.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693126|emb|CAL88867.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693414|emb|CAL89012.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693514|emb|CAL89060.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693706|emb|CAL89156.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693972|emb|CAL89291.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805520|gb|ADE41890.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805524|gb|ADE41892.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|93004314|gb|ABE97077.1| MutY [Helicobacter pylori]
gi|122693738|emb|CAL89172.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693774|emb|CAL89190.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693798|emb|CAL89202.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693830|emb|CAL89218.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954093|gb|ACG58752.1| MutY [Helicobacter pylori]
gi|195954095|gb|ACG58753.1| MutY [Helicobacter pylori]
gi|195954111|gb|ACG58761.1| MutY [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ L P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFSLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G VC
Sbjct: 120 PNESFNHNQALIDLGALVCSP 140
>gi|328956202|ref|YP_004373535.1| A/G-specific DNA-adenine glycosylase [Coriobacterium glomerans PW2]
gi|328456526|gb|AEB07720.1| A/G-specific DNA-adenine glycosylase [Coriobacterium glomerans PW2]
Length = 299
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V E + + A G + + +G R+
Sbjct: 27 RDPYVIWLSEVMLQQTQVPRVEARMPAWLERFPRIEVLAAAGTADVLRAWQGMGYNRRAL 86
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ + ++I++ + + P+ L RLPGIG A I + AF +P + ++T++ +
Sbjct: 87 -SLHATANIIVRDHRSVFPEQTAELLRLPGIGPATAQGIRAFAFDLPGVYLETNVRTVFL 145
Query: 166 RIGLAP-GKTPNK-----VEQSLLRIIPPKHQYNAHY-------------WLVLHGR 203
P+K +E ++P L+ +G
Sbjct: 146 HHFFPDVPAVPDKELIPLIESCCPEMLPEDRHGRFAEPQDERDTPRAWYYALLDYGA 202
>gi|224116426|ref|XP_002331937.1| predicted protein [Populus trichocarpa]
gi|222875026|gb|EEF12157.1| predicted protein [Populus trichocarpa]
Length = 249
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--PSPKGEL----YYVNHFTLIVAVL 56
+ KK + ++ + + +W P EL +Y + + ++V +
Sbjct: 79 AQKKKRKRSPRLTAAQMR---DVAYLRRRPNNRWIPPKSPHELLQENHYHDPWRVLVICM 135
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
L ++ V F + + + + ++ R++G ++E I LS I
Sbjct: 136 LLNCTSGGQVRPILNDFFTLCPDAKTTTNVDQNEIAQLTRSLGFKNTRAEKIKRLSEIY- 194
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + +T LPG+G+ A+ G V L G+
Sbjct: 195 ------LQEDWTHVTFLPGVGKYAADAYAIFCTGRWDRVVPEDHMLTRYWEFLRKGRWII 248
Query: 177 K 177
+
Sbjct: 249 E 249
>gi|122693132|emb|CAL88870.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693716|emb|CAL89161.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|18075317|emb|CAD11054.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692732|emb|CAL88669.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692814|emb|CAL88710.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692876|emb|CAL88741.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692916|emb|CAL88761.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692936|emb|CAL88771.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692944|emb|CAL88775.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692952|emb|CAL88779.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693532|emb|CAL89069.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805506|gb|ADE41883.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|327280386|ref|XP_003224933.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Anolis
carolinensis]
Length = 530
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 51/180 (28%), Gaps = 18/180 (10%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAVLL 57
+K+ Y + +P F P P+ + + + L++A +
Sbjct: 358 RRKTSPYFSSKLTKIAPSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIATIF 412
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
+++ F+ +P K + ++ +G+Y +++ II S +
Sbjct: 413 LNKTSGKMAIPVLWEFFKKYPSPSVARTADWKGMSELLKPLGLYELRAKTIIRFSDEFLV 472
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK 177
+ L GIG+ G + L K
Sbjct: 473 KRWKYP-------IELHGIGKYGNDSYRIFCVNEWKEVQPKDHKLNIYHAWLQQNYEKLK 525
>gi|242255336|gb|ACS88652.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|77798746|gb|ABB03520.1| MutY [Helicobacter pylori]
Length = 152
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + E T + + +++ R +G Y +++N+ + I + E +++
Sbjct: 4 NTVVERFYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQ 62
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQS 181
+P + L +LPGIG AN IL F + VD +I R+ GL P T ++
Sbjct: 63 LPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIK 122
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ +N + L+ G +C KP+
Sbjct: 123 ANGFLNLNESFNHNQALIDLGALICSP-KPK 152
>gi|122693736|emb|CAL89171.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805352|gb|ADE41806.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHVKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|213581516|ref|ZP_03363342.1| endonuclease III [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 132
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 60/132 (45%), Positives = 93/132 (70%)
Query: 66 VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ 125
+NKAT L+ A+TP ML +G + +++YI+TIG++ K+EN+I IL+++ + ++P+
Sbjct: 1 MNKATAKLYPAANTPAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILMDKHNGEVPE 60
Query: 126 TLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI 185
L LPG+GRK ANV+L+ AFG PTI VDTHIFR+ NR APGK +VE+ LL++
Sbjct: 61 DRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKV 120
Query: 186 IPPKHQYNAHYW 197
+P + + + H+W
Sbjct: 121 VPNEFKVDCHHW 132
>gi|122693430|emb|CAL89020.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693442|emb|CAL89024.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693658|emb|CAL89132.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693678|emb|CAL89142.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|77735765|ref|NP_001029577.1| methyl-CpG-binding domain protein 4 [Bos taurus]
gi|73586836|gb|AAI03442.1| Methyl-CpG binding domain protein 4 [Bos taurus]
Length = 554
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 383 IEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 437
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + +++ +G+Y +++ II S
Sbjct: 438 IFLNRTSGKMAIPVLWQFLEKYPSAEAARTADWRDVSEFLKPLGLYDLRAKTIIKFSDEY 497
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 498 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 548
>gi|292805476|gb|ADE41868.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693572|emb|CAL89089.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693578|emb|CAL89092.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693634|emb|CAL89120.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693662|emb|CAL89134.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693784|emb|CAL89195.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693782|emb|CAL89194.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + ++ +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLVNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692902|emb|CAL88754.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQLKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317452221|emb|CBL87693.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693480|emb|CAL89043.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G VC
Sbjct: 120 PNESFNHNQALIDLGALVCSP 140
>gi|292805434|gb|ADE41847.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKNACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|242255340|gb|ACS88654.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSTCVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122694016|emb|CAL89313.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693802|emb|CAL89204.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLRDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692866|emb|CAL88736.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|322700299|gb|EFY92055.1| base excision DNA repair protein [Metarhizium acridum CQMa 102]
Length = 364
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 31/240 (12%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNH------------FTLIVAVL 56
S Q P T +E + + V +V +
Sbjct: 99 SKQSPYPDFARPTAEECRAAHKILAKCHGERIRPEEVVAPTNAAGCGDSPSVLDALVRTI 158
Query: 57 LSAQSTDVNVNKATKHLFEIA---DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
LS +++ N +A + E D +++ G+ +L+ I+T G+ KS+ II +
Sbjct: 159 LSQNTSNKNSTRAKLSMDEEYGGSDKWEEIANGGQARLEKSIQTGGLAATKSKVIIGILQ 218
Query: 114 ILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ ++ + G+G K A+ +L P+ VDTH+ RI+
Sbjct: 219 QTKAKYGVYSLDHLFEASDEDAMKEMISFQGVGPKTASCVLLFCLQRPSFAVDTHVHRIT 278
Query: 165 NRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKA--RKPQCQSCIIS 219
+G + + L ++P + +Y H V HGR CKA R + C +
Sbjct: 279 GLLGWRPAAAGREETQAHLDAVVPDEEKYPLHVLFVTHGRQCEECKAGGRNAK--ICELR 336
>gi|317452239|emb|CBL87702.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLETFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805278|gb|ADE41769.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693183|emb|CAL88896.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYFPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805528|gb|ADE41894.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|26451047|dbj|BAC42629.1| unknown protein [Arabidopsis thaliana]
gi|28950995|gb|AAO63421.1| At5g04570 [Arabidopsis thaliana]
Length = 416
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 186 IPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + Y HY L+ G+ C +P C +C + C+
Sbjct: 38 LDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHF 77
>gi|122694103|emb|CAL89357.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693516|emb|CAL89061.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692954|emb|CAL88780.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|163846317|ref|YP_001634361.1| HhH-GPD family protein [Chloroflexus aurantiacus J-10-fl]
gi|222524079|ref|YP_002568550.1| HhH-GPD family protein [Chloroflexus sp. Y-400-fl]
gi|163667606|gb|ABY33972.1| HhH-GPD family protein [Chloroflexus aurantiacus J-10-fl]
gi|222447958|gb|ACM52224.1| HhH-GPD family protein [Chloroflexus sp. Y-400-fl]
Length = 270
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 46/244 (18%)
Query: 28 IFYLFSLKW-----PSPKGEL---YYVNH-FTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
++ + P N +++ +L Q+ V A + L+
Sbjct: 22 VYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVLVQQTRWETVEGAIERLYRAGL 81
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKS-------ENIISLSHILINEFDNKIPQTLEGL 130
+ + I YR+K+ I + L
Sbjct: 82 IDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAISERYGDVAAMLRRPTAMLRREL 141
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG----LAPGKTPNKVEQSLLRII 186
LP IG + A+VI+ A P VD + RI R+ + ++V+ + +
Sbjct: 142 LTLPRIGPETADVIMLYAGDHPLFVVDAYTRRIFARLVPDEIAWDRASYHQVQHIIAAAL 201
Query: 187 P--PKHQYNAHYWLVLHGRYVCKARKPQCQS----------------------CIISNLC 222
P P+ + H L C +R P+C C + ++C
Sbjct: 202 PSDPRLLADFHAQLNELAVRYCLSR-PRCDGPPARRVYSRQPGRNSFLDRHDGCPLRSVC 260
Query: 223 KRIK 226
+
Sbjct: 261 TWYQ 264
>gi|122692900|emb|CAL88753.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANARLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|99906170|gb|ABF68682.1| MutY [Helicobacter pylori]
gi|317453088|emb|CBL87718.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|332703286|ref|ZP_08423374.1| HhH-GPD family protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553435|gb|EGJ50479.1| HhH-GPD family protein [Desulfovibrio africanus str. Walvis Bay]
Length = 227
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 23/204 (11%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AIGEKKLQNYIRT 97
P G F + V +L+ ++ NV KA L + I E L IR
Sbjct: 20 PSGWWPGETSFEVAVGAVLTQNTSWANVEKAMATLRAHDLLTPAAMLDISEAALAEAIRP 79
Query: 98 IGIYRKKSENIISLSHIL-------------------INEFDNKIPQTLEGLTRLPGIGR 138
G YR K+ + +L L + E L + GIG
Sbjct: 80 AGYYRIKAGRLANLLRFLRAEAEEFGHGEADLHDPALPMLQGRNARELRERLLTVRGIGP 139
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT-PNKVEQSLLRIIPPK--HQYNAH 195
+ A+ IL A G+P VD + RI+ R GLA +++++ +P H
Sbjct: 140 ETADSILLYALGLPIFVVDAYTARIALRHGLAFEDAGYHELQEIFTDALPEDAALFNEYH 199
Query: 196 YWLVLHGRYVCKARKPQCQSCIIS 219
LV G C+ ++P+C+ C ++
Sbjct: 200 ALLVRVGHEWCRKKEPRCRDCPLA 223
>gi|292805256|gb|ADE41758.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693026|emb|CAL88816.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + K++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLKEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693700|emb|CAL89153.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693365|emb|CAL88987.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693826|emb|CAL89216.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G VC
Sbjct: 120 PNESFNHNQALIDLGALVCSP 140
>gi|292805324|gb|ADE41792.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805258|gb|ADE41759.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKRSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693756|emb|CAL89181.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDVNIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693010|emb|CAL88808.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|296474714|gb|DAA16829.1| methyl-CpG binding domain protein 4 [Bos taurus]
Length = 554
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 383 IEKRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 437
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + +++ +G+Y +++ II S
Sbjct: 438 IFLNRTSGKMAIPVLWQFLEKYPSAEAARTADWRDVSEFLKPLGLYDLRAKTIIKFSDEY 497
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 498 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 548
>gi|122692806|emb|CAL88706.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ L P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFSLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|242255328|gb|ACS88648.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLNPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693490|emb|CAL89048.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSSFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692908|emb|CAL88757.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692928|emb|CAL88767.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693287|emb|CAL88948.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693394|emb|CAL89002.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693742|emb|CAL89174.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693808|emb|CAL89207.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693810|emb|CAL89208.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694101|emb|CAL89356.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805322|gb|ADE41791.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|99906180|gb|ABF68687.1| MutY [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805472|gb|ADE41866.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805508|gb|ADE41884.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693616|emb|CAL89111.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692924|emb|CAL88765.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692800|emb|CAL88703.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693926|emb|CAL89268.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|323356328|gb|EGA88130.1| Ntg1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGIYRKKSE 106
+LS+Q+ D A ++ + L I ++G + +K++
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISN 165
I+S IL ++F + +P T+ L LPG+G K A + L A+G I VD H+ R++
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVHVDRLTK 120
Query: 166 RIGLAP---GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
KTP++ L +P + LV G+ + K+R
Sbjct: 121 LWKWVDAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQIITKSRN 168
>gi|154151341|ref|YP_001404959.1| HhH-GPD family protein [Candidatus Methanoregula boonei 6A8]
gi|153999893|gb|ABS56316.1| HhH-GPD family protein [Methanoregula boonei 6A8]
Length = 215
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 78/215 (36%), Gaps = 16/215 (7%)
Query: 17 GCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K+ EI + + + + +++ +L+ Q+ NV +A + L E
Sbjct: 5 SSVKNAKKAGEIASILAAIFGEIPWWPGDTD--EVMIGAILTQQTWWENVEQALRLLREK 62
Query: 77 ADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR--- 132
+ E ++ IR G YR K+ + +L+
Sbjct: 63 DLCTLAAIVAAEPDRIEAAIRCTGFYRMKTRRLKALAAYATGPCGGVEAMETMPTEVLRA 122
Query: 133 ----LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP 188
+ GIG + A+ IL FG + +D + RIS G+A + K ++
Sbjct: 123 GLLGVNGIGEETADSILCYGFGRASFVIDAYTDRISRCAGIAAPRCGLK--DLFESVLEK 180
Query: 189 KH--QYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
H +V + + C + +C+ C I+ L
Sbjct: 181 DQYVYRQTHAHIVEYAKGWCTKK--RCEGCRITAL 213
>gi|18075323|emb|CAD11057.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692772|emb|CAL88689.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692808|emb|CAL88707.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692810|emb|CAL88708.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692834|emb|CAL88720.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692982|emb|CAL88794.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692984|emb|CAL88795.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693130|emb|CAL88869.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693329|emb|CAL88969.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693388|emb|CAL88999.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693420|emb|CAL89015.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693436|emb|CAL89021.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693446|emb|CAL89026.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693448|emb|CAL89027.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693544|emb|CAL89075.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693632|emb|CAL89119.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693710|emb|CAL89158.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693732|emb|CAL89169.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693758|emb|CAL89182.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693956|emb|CAL89283.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693958|emb|CAL89284.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694006|emb|CAL89308.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694036|emb|CAL89323.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694038|emb|CAL89324.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694093|emb|CAL89352.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694151|emb|CAL89381.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954103|gb|ACG58757.1| MutY [Helicobacter pylori]
gi|242255342|gb|ACS88655.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805290|gb|ADE41775.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805296|gb|ADE41778.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805368|gb|ADE41814.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805374|gb|ADE41817.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805414|gb|ADE41837.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805436|gb|ADE41848.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805450|gb|ADE41855.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805514|gb|ADE41887.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452227|emb|CBL87696.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452257|emb|CBL87711.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805456|gb|ADE41858.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805466|gb|ADE41863.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805470|gb|ADE41865.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122694032|emb|CAL89321.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSTCVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693404|emb|CAL89007.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693412|emb|CAL89011.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693295|emb|CAL88952.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKSFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692664|emb|CAL88634.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693790|emb|CAL89198.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693848|emb|CAL89229.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693596|emb|CAL89101.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693640|emb|CAL89123.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692918|emb|CAL88762.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805490|gb|ADE41875.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805496|gb|ADE41878.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693524|emb|CAL89065.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T Q + + +++ R +G Y +++N+ + I I E ++++P +
Sbjct: 1 FYSPFLKAFPTLQDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNDSFNHNQALIDLGALICSP 140
>gi|122694109|emb|CAL89360.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|317452199|emb|CBL87682.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805430|gb|ADE41845.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
GL +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 GLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|291236887|ref|XP_002738372.1| PREDICTED: methyl-CpG binding domain protein 4-like [Saccoglossus
kowalevskii]
Length = 862
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 7/129 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L+VA + ++T F + + + K++ N I +G+Y K+
Sbjct: 736 FHDPWKLLVATIFLNRTTGKAAIPILWQFFTKWPSAVETINADWKEIANLIHPLGLYDKR 795
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ +I S I++ L GIG+ G +
Sbjct: 796 AKMLIRFSEEYIHKNWKYP-------IELYGIGKYGNDSYRIFCVNEWKQVKPEDHMLNK 848
Query: 165 NRIGLAPGK 173
L
Sbjct: 849 YHDWLWQNY 857
>gi|302809902|ref|XP_002986643.1| hypothetical protein SELMODRAFT_450920 [Selaginella moellendorffii]
gi|302809904|ref|XP_002986644.1| hypothetical protein SELMODRAFT_450920 [Selaginella moellendorffii]
gi|300145531|gb|EFJ12206.1| hypothetical protein SELMODRAFT_450920 [Selaginella moellendorffii]
gi|300145532|gb|EFJ12207.1| hypothetical protein SELMODRAFT_450920 [Selaginella moellendorffii]
Length = 469
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C +P C +C + C+
Sbjct: 120 YELHYQMITFGKVFCTKTRPNCNACPMRMECRHF 153
>gi|317452219|emb|CBL87692.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|302818184|ref|XP_002990766.1| hypothetical protein SELMODRAFT_161136 [Selaginella moellendorffii]
gi|300141504|gb|EFJ08215.1| hypothetical protein SELMODRAFT_161136 [Selaginella moellendorffii]
Length = 470
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
Y HY ++ G+ C +P C +C + C+
Sbjct: 120 YELHYQMITFGKVFCTKTRPNCNACPMRMECRHF 153
>gi|122692880|emb|CAL88743.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|149472437|ref|XP_001517653.1| PREDICTED: similar to Nth endonuclease III-like 1 (E. coli)
[Ornithorhynchus anatinus]
Length = 262
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L + +L + + L I +G ++ K I
Sbjct: 120 YQVLLSLMLSSQTKDQVTAGAMRRLQAHGLSVDGVLRMDDATLGRLIYPVGFWKSKVRFI 179
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTHIFRISNRI 167
+ IL + + IP T+ GL +LPG+G K A++ +++A+G + I VDTH+ RI+NR+
Sbjct: 180 KQTTAILKDRYRGDIPATVAGLLQLPGVGPKMAHLAMAIAWGAVSGIAVDTHVHRIANRL 239
Query: 168 GLAPGKT--PNKVEQSLLRIIPP 188
+T P + +L +P
Sbjct: 240 QWTQTETKSPEQTRAALEDWLPR 262
>gi|122693666|emb|CAL89136.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693762|emb|CAL89184.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693984|emb|CAL89297.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805286|gb|ADE41773.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805308|gb|ADE41784.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805332|gb|ADE41796.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693024|emb|CAL88815.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693367|emb|CAL88988.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805402|gb|ADE41831.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693564|emb|CAL89085.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693650|emb|CAL89128.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|256005955|ref|ZP_05430898.1| hypothetical protein ClothDRAFT_2759 [Clostridium thermocellum DSM
2360]
gi|255990093|gb|EEU00232.1| hypothetical protein ClothDRAFT_2759 [Clostridium thermocellum DSM
2360]
gi|316941354|gb|ADU75388.1| HhH-GPD family protein [Clostridium thermocellum DSM 1313]
Length = 246
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY--NAHYWL 198
I + I D HI R+ R GL R + P+ + W
Sbjct: 159 QFKIPFSDYYSIDISPDVHILRVMRRTGLVDNNADLDSIIYKARELNPEFPGIIDFSCW- 217
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
GR C+ P C CII++ CK++
Sbjct: 218 -EIGRTWCRPNNPNCSECIINSECKKV 243
>gi|122693842|emb|CAL89226.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ L P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFSLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G VC
Sbjct: 120 PNESFNHNQALIDLGALVCSP 140
>gi|18075345|emb|CAD11068.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694065|emb|CAL89338.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805346|gb|ADE41803.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G VC
Sbjct: 120 PNESFNHNQALIDLGALVCSP 140
>gi|122693776|emb|CAL89191.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693836|emb|CAL89223.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693375|emb|CAL88992.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|317452249|emb|CBL87707.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|242095290|ref|XP_002438135.1| hypothetical protein SORBIDRAFT_10g008590 [Sorghum bicolor]
gi|241916358|gb|EER89502.1| hypothetical protein SORBIDRAFT_10g008590 [Sorghum bicolor]
Length = 279
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 20/190 (10%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V LLS +TD +A L + +++ K+L++ IR G+ K+ I ++
Sbjct: 81 LVITLLSQNTTDAISRRAFASLKAAFPSWDQVVDEEGKRLEDAIRCGGLATTKAARIRAM 140
Query: 112 SHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ + + L+R GIG K +L VDTH+ R
Sbjct: 141 LRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVACVLMFYLQKDDFPVDTHVLR 200
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CK-------ARKPQ 212
I+ +G P + K L IP +++ + V HG+ C ++
Sbjct: 201 ITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTHGKLCQSCTKKVVSDKSKNSN 260
Query: 213 CQSCIISNLC 222
+C ++ C
Sbjct: 261 -AACPLAGYC 269
>gi|255540783|ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
gi|223550571|gb|EEF52058.1| Endonuclease III, putative [Ricinus communis]
Length = 291
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V +LS +T+VN +A +L T Q +LA K ++N IR G+ K+ I ++
Sbjct: 90 LVKTVLSQNTTEVNSQRAFDNLKSDFPTWQDVLAAEPKWIENAIRCGGLAPAKASCIKNI 149
Query: 112 SHILINEFDNKIPQTLEGLT---------RLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ L+ + + L ++ + G+G K +L VDTH+F
Sbjct: 150 LNCLLEKKGKICLEYLRDMSVDEIKAELSQFKGVGPKTVACVLMFHLQQEDFPVDTHVFE 209
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC-------- 213
I+ +G P NK L + IP + +++ + L HG+ C+ +C
Sbjct: 210 IAKALGWVPEVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKL-CR----KCIKKRGNQS 264
Query: 214 ------QSCIISNLCKR 224
SC + + C
Sbjct: 265 RKESHDDSCPLLSYCNS 281
>gi|122693764|emb|CAL89185.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693770|emb|CAL89188.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692930|emb|CAL88768.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692960|emb|CAL88783.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693349|emb|CAL88979.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693600|emb|CAL89103.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693608|emb|CAL89107.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255286|gb|ACS88627.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805382|gb|ADE41821.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692850|emb|CAL88728.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKRSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|221194901|ref|ZP_03567957.1| HhH-GPD family protein [Atopobium rimae ATCC 49626]
gi|221184804|gb|EEE17195.1| HhH-GPD family protein [Atopobium rimae ATCC 49626]
Length = 315
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 63/185 (34%), Gaps = 20/185 (10%)
Query: 33 SLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK 89
+ L + + + + ++ ++ Q+ V + E T + A
Sbjct: 43 RELYRD----LPWRRTYDPYAIWISEVMLQQTQVSRVMDRWQRWLERFPTVDALAAAAPA 98
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + +G R+ + ++E P+ ++ L LPGIG A I + ++
Sbjct: 99 DVLEEWQGLGYNRRALLVHKAS--QAVSESGGVFPREVKELVALPGIGPATAAGIRAFSW 156
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVE-----------QSLLRIIPPKHQYNAHYWL 198
+ + ++T++ + + E R P + + +Y L
Sbjct: 157 NLHGVYLETNVRAVFLHELYPDAEGVPDSELIPLVEKTCPSDDPFRERPDDNPRSWYYAL 216
Query: 199 VLHGR 203
+ +G
Sbjct: 217 LDYGA 221
>gi|122693602|emb|CAL89104.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNDSFNHNQALIDLGALICSP 140
>gi|122693540|emb|CAL89073.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693674|emb|CAL89140.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ + R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|114589105|ref|XP_001143501.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 1 [Pan
troglodytes]
Length = 262
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 50/178 (28%), Gaps = 18/178 (10%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 91 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 145
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 146 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 205
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
+ + L GIG+ G + L
Sbjct: 206 LTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENH 256
>gi|297263977|ref|XP_001116090.2| PREDICTED: methyl-CpG-binding domain protein 4-like, partial
[Macaca mulatta]
Length = 544
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 18/164 (10%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAVLL 57
+K+ Y + +P F P P+ + + + L++A +
Sbjct: 383 RRKTSLYFSSKYNKEAPSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIATIF 437
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILIN 117
+++ E + + + + ++ +G+Y +++ I+ S +
Sbjct: 438 LNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLT 497
Query: 118 EFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L GIG+ G + T I
Sbjct: 498 KQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVRPTPIH 534
>gi|122693714|emb|CAL89160.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693726|emb|CAL89166.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693018|emb|CAL88812.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|242255338|gb|ACS88653.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122694008|emb|CAL89309.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693846|emb|CAL89228.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693892|emb|CAL89251.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692884|emb|CAL88745.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692886|emb|CAL88746.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692888|emb|CAL88747.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693136|emb|CAL88872.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693856|emb|CAL89233.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|6782414|emb|CAB70610.1| A/G specific adenine glycosylase [Streptococcus pneumoniae]
Length = 185
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 176 NKVEQSLLR-IIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
K+ Q+++ +I P + + L+ G + P+ + + + +
Sbjct: 1 RKIFQAMMEILINPDRPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQ 52
>gi|122693680|emb|CAL89143.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693688|emb|CAL89147.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNDSFNHNQALIDLGALICSP 140
>gi|122692956|emb|CAL88781.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692832|emb|CAL88719.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317452241|emb|CBL87703.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ ++
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNTHAKDLQIKANDLLS 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + ++ G VC
Sbjct: 120 LNESFNHNQAIIDLGALVCSP 140
>gi|292805416|gb|ADE41838.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|4467627|emb|CAB37765.1| MutY protein [Helicobacter pylori]
gi|122693628|emb|CAL89117.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693652|emb|CAL89129.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693670|emb|CAL89138.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805390|gb|ADE41825.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693002|emb|CAL88804.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|93004318|gb|ABE97079.1| MutY [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|292805274|gb|ADE41767.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHYSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|226328818|ref|ZP_03804336.1| hypothetical protein PROPEN_02718 [Proteus penneri ATCC 35198]
gi|225202004|gb|EEG84358.1| hypothetical protein PROPEN_02718 [Proteus penneri ATCC 35198]
Length = 161
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+ G VC KP+C+ C ++ C Q
Sbjct: 1 MDLGAMVCTRSKPKCELCPLNTGCIAYAQ 29
>gi|122693612|emb|CAL89109.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASTPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRENTACVDANIKRVLLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467631|emb|CAB37767.1| MutY protein [Helicobacter pylori]
gi|122693384|emb|CAL88997.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693428|emb|CAL89019.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693854|emb|CAL89232.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693804|emb|CAL89205.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692858|emb|CAL88732.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693682|emb|CAL89144.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNDSFNHNQALIDLGALICSP 140
>gi|122693548|emb|CAL89077.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693004|emb|CAL88805.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693786|emb|CAL89196.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQVKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|242255324|gb|ACS88646.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805376|gb|ADE41818.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692878|emb|CAL88742.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|254557767|ref|YP_003064184.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
JDM1]
gi|254046694|gb|ACT63487.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
JDM1]
Length = 222
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 16/196 (8%)
Query: 25 LEEIFYLFSLKWPSPKGEL-----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E ++ P+ L + ++ +L + NV+ A +L D
Sbjct: 3 IETLYQQMLAAMG-PRHWLQAGIPPAETPWEILWGGILVQNTNWRNVDYALANLKAATDF 61
Query: 80 -PQKMLAIGEKKLQNYIRTIGIYRKKS-------ENIISLSHILINEFDNKIPQTLEGLT 131
P+++LA+ + +L ++ G Y +K L Q L
Sbjct: 62 EPRRLLALTDTELTTLVKPAGFYTRKVPTLKALAAWCGQYDFDLTVMRALPAEQLRRELI 121
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH- 190
L GIG + A+ F PTI +DT++ R+ + K +Q +++
Sbjct: 122 ALRGIGDETADYFSMYVFHQPTIIIDTYLRRLFGWLNQPLPNNYLKAQQLIMQAWHYDLT 181
Query: 191 -QYNAHYWLVLHGRYV 205
+ H +V G+ V
Sbjct: 182 TAWEWHALIVDFGKQV 197
>gi|122693134|emb|CAL88871.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693766|emb|CAL89186.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805246|gb|ADE41753.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805282|gb|ADE41771.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693249|emb|CAL88929.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|317452223|emb|CBL87694.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQSKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692844|emb|CAL88725.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|171185793|ref|YP_001794712.1| iron-sulfur cluster loop [Thermoproteus neutrophilus V24Sta]
gi|170935005|gb|ACB40266.1| iron-sulfur cluster loop [Thermoproteus neutrophilus V24Sta]
Length = 300
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
GR VC P+CQSC ++CK
Sbjct: 259 FGRRVCTRDAPRCQSCPFKDMCKAY 283
>gi|317452217|emb|CBL87691.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRMLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693752|emb|CAL89179.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|28379618|ref|NP_786510.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
WCFS1]
gi|300769559|ref|ZP_07079445.1| deoxyribonuclease (pyrimidine dimer) [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308181849|ref|YP_003925977.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|28272458|emb|CAD65382.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
WCFS1]
gi|300492974|gb|EFK28156.1| deoxyribonuclease (pyrimidine dimer) [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308047340|gb|ADN99883.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 222
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 16/196 (8%)
Query: 25 LEEIFYLFSLKWPSPKGEL-----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+E ++ P+ L + ++ +L + NV+ A +L D
Sbjct: 3 IETLYQQMLAAMG-PRHWLQAGIPPAETPWEILWGGILVQNTNWRNVDYALANLKAATDF 61
Query: 80 -PQKMLAIGEKKLQNYIRTIGIYRKKS-------ENIISLSHILINEFDNKIPQTLEGLT 131
P+++LA+ + +L ++ G Y +K L Q L
Sbjct: 62 EPRQLLALTDTELTTLVKPAGFYTRKVPTLKALAAWCGQYDFDLTVMRALPAEQLRRELI 121
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH- 190
L GIG + A+ F PTI +DT++ R+ + K +Q +++
Sbjct: 122 ALRGIGDETADYFSMYVFHQPTIIIDTYLRRLFGWLNQPLPSNYLKAQQLIMQAWHYDLT 181
Query: 191 -QYNAHYWLVLHGRYV 205
+ H +V G+ V
Sbjct: 182 TAWEWHALIVDFGKQV 197
>gi|122692972|emb|CAL88789.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693255|emb|CAL88932.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693257|emb|CAL88933.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805480|gb|ADE41870.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693381|emb|CAL88995.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693251|emb|CAL88930.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.8 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693844|emb|CAL89227.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|119872457|ref|YP_930464.1| iron-sulfur cluster loop [Pyrobaculum islandicum DSM 4184]
gi|119673865|gb|ABL88121.1| iron-sulfur cluster loop [Pyrobaculum islandicum DSM 4184]
Length = 297
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRI 225
GR +C P+C C + +CK
Sbjct: 256 FGRKICIRESPKCDICPLKEVCKAY 280
>gi|147785279|emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
Length = 1824
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G+ C KP C +C + C+
Sbjct: 1425 QMITFGKVFCTKSKPNCNACPMRGECRHF 1453
>gi|317452267|emb|CBL87716.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|303232540|ref|ZP_07319226.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
gi|302481327|gb|EFL44401.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
Length = 342
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 17/190 (8%)
Query: 24 ELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
++ + +P + + + ++ ++ Q+ V + E T +
Sbjct: 61 KISQAADTLYRDFP----WRNTTDPYAIWISEVMLQQTQTARVALRWQEWLEQFPTVDVL 116
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +G R+ + + +I+ PQT L +LPGIG A
Sbjct: 117 AQAQTADVLRAWQGMGYNRRALYVLK--TAQIISAHGGVFPQTTAELVQLPGIGAATAAG 174
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE--QSLLRIIPPKH---------QY 192
I + A+ ++T++ + + E + + P
Sbjct: 175 ICAFAWNRHCAYLETNVRSVLLHELFPHEDQVSDRELITFVDALCPDDAPRTSRALHTPR 234
Query: 193 NAHYWLVLHG 202
+Y L+ +G
Sbjct: 235 MWNYALLDYG 244
>gi|303324187|ref|XP_003072081.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111791|gb|EER29936.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037075|gb|EFW19013.1| helix-hairpin-helix domain-containing protein [Coccidioides
posadasii str. Silveira]
Length = 444
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + ++ + PGIG K A ++ P VDTH+FR+ +G P + N
Sbjct: 310 HMHGLSKDEAMQEFIKYPGIGVKTAACVVLFCLRRPCFAVDTHVFRLCKWLGWVPPEKVN 369
Query: 177 KV--EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
++ + L +P +Y+ H + HG+ C P+C
Sbjct: 370 EITAFRHLEVRVPDHLKYSLHQLFIFHGKE-C----PRC 403
>gi|122693772|emb|CAL89189.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693750|emb|CAL89178.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693962|emb|CAL89286.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122694028|emb|CAL89319.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805502|gb|ADE41881.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|325067976|ref|ZP_08126649.1| HhH-GPD family protein [Actinomyces oris K20]
Length = 110
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 34/104 (32%), Gaps = 8/104 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYV----NHFTLIVAVLL 57
V++ S +P L +++ + + +L + + ++V+ ++
Sbjct: 11 VAATVSPVPDRPTPDDTLTAATSAQDVMT----WYDAHARDLPWRRPGTTPWEVLVSEVM 66
Query: 58 SAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
S Q+ V A + P ++ + +G
Sbjct: 67 SQQTPVARVVPAWQEWMRRWPGPAELAQAPTAAVLRVWGRLGYP 110
>gi|292805272|gb|ADE41766.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805300|gb|ADE41780.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693694|emb|CAL89150.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693530|emb|CAL89068.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693692|emb|CAL89149.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075325|emb|CAD11058.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692822|emb|CAL88714.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693816|emb|CAL89211.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692690|emb|CAL88648.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694044|emb|CAL89327.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805280|gb|ADE41770.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805338|gb|ADE41799.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805344|gb|ADE41802.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805358|gb|ADE41809.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693377|emb|CAL88993.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693964|emb|CAL89287.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|292805320|gb|ADE41790.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692802|emb|CAL88704.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692828|emb|CAL88717.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693746|emb|CAL89176.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694105|emb|CAL89358.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693622|emb|CAL89114.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
++ T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKVFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|207093423|ref|ZP_03241210.1| A/G-specific adenine glycosylase [Helicobacter pylori
HPKX_438_AG0C1]
gi|122694018|emb|CAL89314.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694026|emb|CAL89318.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693562|emb|CAL89084.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693289|emb|CAL88949.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693522|emb|CAL89064.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693526|emb|CAL89066.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693566|emb|CAL89086.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693576|emb|CAL89091.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693588|emb|CAL89097.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693604|emb|CAL89105.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693642|emb|CAL89124.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693686|emb|CAL89146.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|313140212|ref|ZP_07802405.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132722|gb|EFR50339.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 238
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 20/219 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S++ + P ++E ++ S + SP G F ++V +L+
Sbjct: 1 MASARGNGRQSRRRPAAG-----DIESLYRALSAEL-SPTGWWPADTTFEIMVGAVLTQN 54
Query: 61 STDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
+ NV+++ L + P + + ++LQ IR G Y KS+ + SLS +
Sbjct: 55 TAWGNVDRSLAALKAESMLDPHALTVVEPERLQELIRPSGFYVNKSKTLRSLSRWYVERC 114
Query: 120 D--------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
D + L L GIG + A+ ++ F T DT+ R+ +G
Sbjct: 115 DASPEGADGITDAELRAELLGLFGIGGETADDMMLYVFSRRTFVADTYARRLFAFLGFDA 174
Query: 172 GKTPNKVEQSLLRI-----IPPKHQYNAHYWLVLHGRYV 205
++ + + H + G+
Sbjct: 175 PAGYPAFHKAYAPVVLDTGLDVADLQEFHGLIDEFGKAY 213
>gi|224283060|ref|ZP_03646382.1| HhH-GPD family protein [Bifidobacterium bifidum NCIMB 41171]
Length = 240
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 20/219 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S++ + P ++E ++ S + SP G F ++V +L+
Sbjct: 3 MASARGNGRQSRRRPAAG-----DIESLYRALSAEL-SPTGWWPADTTFEIMVGAVLTQN 56
Query: 61 STDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
+ NV+++ L + P + + ++LQ IR G Y KS+ + SLS +
Sbjct: 57 TAWGNVDRSLAALKAESMLDPHALTVVEPERLQELIRPSGFYVNKSKTLRSLSRWYVERC 116
Query: 120 D--------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
D + L L GIG + A+ ++ F T DT+ R+ +G
Sbjct: 117 DASPEGADGITDAELRAELLGLFGIGGETADDMMLYVFSRRTFVADTYARRLFAFLGFDA 176
Query: 172 GKTPNKVEQSLLRI-----IPPKHQYNAHYWLVLHGRYV 205
++ + + H + G+
Sbjct: 177 PAGYPAFHKAYAPVVLDTGLDVADLQEFHGLIDEFGKAY 215
>gi|122693114|emb|CAL88861.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|4467629|emb|CAB37766.1| MutY protein [Helicobacter pylori]
gi|99906182|gb|ABF68688.1| MutY [Helicobacter pylori]
gi|122693064|emb|CAL88836.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693722|emb|CAL89164.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693906|emb|CAL89258.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693950|emb|CAL89280.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693976|emb|CAL89293.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694047|emb|CAL89329.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693896|emb|CAL89253.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805254|gb|ADE41757.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|219849738|ref|YP_002464171.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
gi|219543997|gb|ACL25735.1| HhH-GPD family protein [Chloroflexus aggregans DSM 9485]
Length = 268
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 81/247 (32%), Gaps = 46/247 (18%)
Query: 25 LEEIFYLFSLKWP--------SPKGELYYVNH-FTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ E++ + P + +++ +L Q+ V A L
Sbjct: 17 VNEVYRRLVDHFGPLYGPRTVHPWWPIISTEPQLEMVIGAVLVQQTRWETVEDAIARLHA 76
Query: 76 IA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN-------KIPQTL 127
+ +L I Y++K+ +I+L+ I+ + + P
Sbjct: 77 AGLIDLVALAQADAGELARLIYPCAFYQQKANGLIALARIVRERYGDLATLLRLPAPMLH 136
Query: 128 EGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR----IGLAPGKTPNKVEQSLL 183
L +LP IG + A+VI+ A G P VD + RI R + +V+Q++
Sbjct: 137 TELLQLPRIGPETADVIMLYAGGYPRFVVDAYTRRIFARLAPDRLAWERASYVQVQQTIA 196
Query: 184 RIIP--PKHQYNAHYWLVLHGRYVCKARKPQCQS----------------------CIIS 219
+P P + H L C +P+C C +
Sbjct: 197 SALPVDPVLLADLHAQLNELAVRYCL-VQPRCDGPPSRRIYSRQPGRNSFLDRNDGCPLR 255
Query: 220 NLCKRIK 226
+C+ +
Sbjct: 256 EICRWYR 262
>gi|122694042|emb|CAL89326.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693828|emb|CAL89217.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122692696|emb|CAL88651.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.4 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + + R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEDVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693690|emb|CAL89148.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDSNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805444|gb|ADE41852.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|13542104|ref|NP_111792.1| endonuclease III-like protein [Thermoplasma volcanium GSS1]
Length = 231
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 9/205 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-ADT 79
P I+ + G +++ +L+ ++ NV KA +L
Sbjct: 4 NPPNFANIYEELFRYYGD-LGWWPAETKDEIVIGAILTQNTSWKNVEKAIANLKSHGITK 62
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD-----NKIPQTLEGLTRLP 134
+ + I + ++ IR+ G Y +K+E + ++S +++ EF+ I E L +
Sbjct: 63 LEDVCKIEKNEIAKLIRSSGFYNQKAERLKAVSCLIVGEFNGIDRIKDIDAFAERLKSIK 122
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GIG++ N IL A P +D + R R K + ++ K N
Sbjct: 123 GIGQETLNSILLYALDAPVFVIDKYTVRFLERYSSFDEVDSIK-KSVEEQLADVKLMQNF 181
Query: 195 HYWLVLHGRYVCKARKPQCQSCIIS 219
H +V + C+ ++P C C +
Sbjct: 182 HAMIVQLSKDFCR-KEPICMKCPLK 205
>gi|122693552|emb|CAL89079.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693584|emb|CAL89095.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693590|emb|CAL89098.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|99906178|gb|ABF68686.1| MutY [Helicobacter pylori]
gi|292805426|gb|ADE41843.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452233|emb|CBL87699.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|292805348|gb|ADE41804.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|292805288|gb|ADE41774.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693550|emb|CAL89078.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R + GL P +++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRALLRLFGLDPNIQAKDLQRKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|289522696|ref|ZP_06439550.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504532|gb|EFD25696.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 289
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM 147
+ + R + + ++ LI + + + GIG K A++ ++
Sbjct: 135 HRFVDIMSRLFYLGITRIRDVYGGDASLIWKGKPSSAEVIYRFLEFDGIGPKIASMAANI 194
Query: 148 AFGIPTIGV----------DTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY--NAH 195
+ D H+ R+ R+G + R + P+ +
Sbjct: 195 LAREFKVPFADYYSIDISADVHVKRVFARLGFCNPDPTVEQVVYKARALYPQFPGIFDFS 254
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNLCKR 224
W GR CK +KP C C + ++C
Sbjct: 255 CW--EIGRKWCKPKKPLCNECNMRDICPS 281
>gi|122693450|emb|CAL89028.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693353|emb|CAL88981.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPDIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693974|emb|CAL89292.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693253|emb|CAL88931.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693379|emb|CAL88994.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805498|gb|ADE41879.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|67901332|ref|XP_680922.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
gi|40742649|gb|EAA61839.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
Length = 969
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 56/286 (19%), Positives = 99/286 (34%), Gaps = 77/286 (26%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPK------GELYYV--NH----F 49
V ++K + G+ + + I P+ ELY+ + F
Sbjct: 121 VPARKVKNEDGSFTVEAPSNWDAIYSIVKKMREDNPTAPVDTMGCAELYWRASSPRDRRF 180
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK------------------- 90
++A++LS+Q+ D A + L E +
Sbjct: 181 QTLIALMLSSQTKDTVTAVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENGEPAIKQ 240
Query: 91 -----------------------------LQNYIRTIGIYRKKSENIISLSHILINEFDN 121
L + I T+G + K++ I + I+ +++++
Sbjct: 241 EAKDGVPPANPSHDSTLNLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEIIRDQYNS 300
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRIGLAPGKTPNKVEQ 180
IP T L +LPG+G K A + +S A+G VD H+ RI+N G KTP +
Sbjct: 301 DIPSTPAELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWHKTKTPEETRM 360
Query: 181 SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIIS--NLCKR 224
SL +P + + K +C C ++ LCK
Sbjct: 361 SLESWLPKDKWHEIN--------------KLRCGDCGLAGTKLCKS 392
>gi|242255320|gb|ACS88644.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805268|gb|ADE41764.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805428|gb|ADE41844.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805442|gb|ADE41851.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|18075329|emb|CAD11060.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694075|emb|CAL89343.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693538|emb|CAL89072.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693614|emb|CAL89110.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693638|emb|CAL89122.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693646|emb|CAL89126.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693664|emb|CAL89135.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317452245|emb|CBL87705.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693952|emb|CAL89281.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|307353834|ref|YP_003894885.1| HhH-GPD family protein [Methanoplanus petrolearius DSM 11571]
gi|307157067|gb|ADN36447.1| HhH-GPD family protein [Methanoplanus petrolearius DSM 11571]
Length = 211
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 15/206 (7%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML 84
L+ I + + +++ +L+ Q+ NV KA +L + +
Sbjct: 11 LKRIISCLQDIYGDAGWWP--GDADQVMIGAILTQQTRWENVEKALSNLESVGIKTLDDV 68
Query: 85 AIGEKKL-QNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQTLEGLTRLPGIG 137
+ ++ IR G YR K+ + LS + + +D + + L + G+G
Sbjct: 69 LAADDEIVMENIRCTGYYRMKTGRLKELSSFVAGKGGVDALYDVPVDELRRDLLGVKGVG 128
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNAH 195
+ A+ IL A +P+ +D++ RIS G+ K K +I+P + H
Sbjct: 129 AETADSILCYALNMPSYVIDSYTERISGCAGITAKKDRLK--DLFEKILPCSVEKYQTCH 186
Query: 196 YWLVLHGRYVCKARKPQCQSCIISNL 221
W V + + C + +C C I NL
Sbjct: 187 GWFVEYAKEFCIKK--RCDECRIKNL 210
>gi|122692942|emb|CAL88774.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQMKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|119173285|ref|XP_001239121.1| hypothetical protein CIMG_10143 [Coccidioides immitis RS]
Length = 434
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + ++ + PGIG K A ++ P VDTH+FR+ +G P + N
Sbjct: 300 HMHGLSKDEAMQEFIKYPGIGVKTAACVVLFCLRRPCFAVDTHVFRLCKWLGWVPPEKVN 359
Query: 177 KV--EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
++ + L +P +Y+ H + HG+ C P+C
Sbjct: 360 EITAFRHLEVRVPDHLKYSLHQLFIFHGKE-C----PRC 393
>gi|4467613|emb|CAB37758.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|292805306|gb|ADE41783.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGSLICSP 140
>gi|122693034|emb|CAL88820.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ G P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGWVPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805328|gb|ADE41794.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|122693209|emb|CAL88909.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805262|gb|ADE41761.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805292|gb|ADE41776.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805302|gb|ADE41781.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805386|gb|ADE41823.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805396|gb|ADE41828.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805424|gb|ADE41842.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805518|gb|ADE41889.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|219851665|ref|YP_002466097.1| HhH-GPD family protein [Methanosphaerula palustris E1-9c]
gi|219545924|gb|ACL16374.1| HhH-GPD family protein [Methanosphaerula palustris E1-9c]
Length = 216
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 20/212 (9%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYY--VNHFTLIVAVLLSAQSTDVNVNKATKHL-FEIAD 78
++ E+ + L + + +I+ +L+ Q+ +V A L
Sbjct: 11 REKTAELVRNLGAVYG----PLAWWSDDPELVIIGAMLTQQTRWEHVEHALDKLGAAGLL 66
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTR------ 132
+ + L+ + + G YR K+ + +L+ +I+ +
Sbjct: 67 SLATLARADRVVLEQAVYSTGFYRVKARRLKALAGHMIDRYGGVNGMRRCPTEDLRADLL 126
Query: 133 -LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK-- 189
G+G + A+ IL FG T +D + RI + G+ K ++P
Sbjct: 127 SCEGVGTETADSILCYGFGRCTFVIDAYTTRICSCAGVRQKGARLKC--LFEEVLPASVA 184
Query: 190 HQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ H +V G+ C+ + +C+ C I NL
Sbjct: 185 AYQDTHAHMVEFGKENCQRQ--RCEQCWIRNL 214
>gi|122693580|emb|CAL89093.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693582|emb|CAL89094.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|258570499|ref|XP_002544053.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904323|gb|EEP78724.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1143
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
+ + ++ L + ++ + PGIG K A ++ P VDTH+
Sbjct: 301 HGNRVDHADEHMLSLDYMHALSKDEAMQRFIKYPGIGVKTAACVVLFCLRRPCFAVDTHV 360
Query: 161 FRISNRIGLAPGKTPNKV--EQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
FR+S +G P + N++ + L +P +Y+ H + HG+ C P+C
Sbjct: 361 FRLSKWLGWIPSEKVNEITAFRHLEVRVPDHLKYSLHQLFIFHGKE-C----PRC 410
>gi|224129470|ref|XP_002320594.1| predicted protein [Populus trichocarpa]
gi|222861367|gb|EEE98909.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--PSPKGEL----YYVNHFTLIVAVL 56
+ KK + ++ + + +W P EL +Y + + ++V +
Sbjct: 39 AQKKKRKRSPRLTAAQMR---DVAYLRRRPNNRWIPPKSPHELLQENHYHDPWRVLVICM 95
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
L ++ V F + + + + ++ R++G ++E I LS I
Sbjct: 96 LLNCTSGGQVRPILNDFFTLCPDAKTTTNVDQNEIAQLTRSLGFKNTRAEKIKRLSEIY- 154
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + +T LPG+G+ A+ G V L G+
Sbjct: 155 ------LQEDWTHVTFLPGVGKYAADAYAIFCTGRWDRVVPEDHMLTRYWEFLRKGRWII 208
Query: 177 K 177
+
Sbjct: 209 E 209
>gi|122693301|emb|CAL88955.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692882|emb|CAL88744.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|68010596|ref|XP_670811.1| A/G-specific adenine glycosylase [Plasmodium berghei strain ANKA]
gi|56486410|emb|CAI03376.1| A/G-specific adenine glycosylase, putative [Plasmodium berghei]
Length = 282
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 7/154 (4%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ + ++ ++ Q+ V T ++ + + +G Y +++N+
Sbjct: 130 YQIYISEVMLQQTKVATVLNFYLKWMNKWPTIFDLVKSNLDDILTEWKGLGYYN-RAKNL 188
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+ I++N+++ P L+ L LPGIG A I + I +DT+I +I +RI
Sbjct: 189 LDCCKIVVNKYNGIFPNDLKLLKELPGIGNYTAKAISIHLYNSKDICIDTNIIKIFSRIT 248
Query: 169 LAPGKTPNKVEQSLLR------IIPPKHQYNAHY 196
+ + I + + +
Sbjct: 249 DTINYYGSTILSQHCEEVSNILCIGAYNYSDFNQ 282
>gi|224114415|ref|XP_002332373.1| predicted protein [Populus trichocarpa]
gi|222832177|gb|EEE70654.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKW--PSPKGEL----YYVNHFTLIVAVL 56
+ KK + ++ + + +W P EL +Y + + ++V +
Sbjct: 61 AQKKKRKRSPRLTAAQMR---DVAYLRRRPNNRWIPPKSPHELLQENHYHDPWRVLVICM 117
Query: 57 LSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILI 116
L ++ V F + + + + ++ R++G ++E I LS I
Sbjct: 118 LLNCTSGGQVRPILNDFFTLCPDAKTTTNVDQNEIAQLTRSLGFKNTRAEKIKRLSEIY- 176
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + +T LPG+G+ A+ G V L G+
Sbjct: 177 ------LQEDWTHVTFLPGVGKYAADAYAIFCTGRWDRVVPEDHMLTRYWEFLRKGRWII 230
Query: 177 K 177
+
Sbjct: 231 E 231
>gi|297815970|ref|XP_002875868.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321706|gb|EFH52127.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 21/202 (10%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
P E + +V +LLS +T+ N +A L + +LA K +++ IR
Sbjct: 86 EPLDEAEEESVLDGLVKILLSQNTTESNSQRAFASLKAAFPNWEDVLAAESKSIESAIRC 145
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMA 148
G+ KK+ I ++ + L E + L+ GIG K + +L
Sbjct: 146 GGLAPKKAVCIKNILNRLQTERGVLCLEYLRGLSVEEVKTELSHFKGIGPKTVSCVLMFN 205
Query: 149 FGIPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV-- 205
VDTH+F I+ +G P NK L R IP + +++ + L HG+
Sbjct: 206 LQHNDFPVDTHVFEIAKALGWVPKTADRNKTYVHLNRRIPDELKFDLNCLLYTHGKLCSN 265
Query: 206 CKAR--KPQ-------CQSCII 218
CK KP+ C +
Sbjct: 266 CKKTVAKPKAKARVASPDECPL 287
>gi|122693169|emb|CAL88889.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLEPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|122692700|emb|CAL88653.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAHLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467617|emb|CAB37760.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|310287429|ref|YP_003938687.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium bifidum
S17]
gi|309251365|gb|ADO53113.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium bifidum
S17]
Length = 240
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 20/219 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S++ + P ++E ++ S + SP G F ++V +L+
Sbjct: 3 MASARGNGGQSRRRPAAG-----DIESLYRALSAEL-SPTGWWPADTTFEIMVGAVLTQN 56
Query: 61 STDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
+ NV+++ L + P + + ++LQ IR G Y KS+ + SLS +
Sbjct: 57 TAWGNVDRSLAALKAESMLDPHALTVVEPERLQELIRPSGFYVNKSKTLRSLSRWYVERC 116
Query: 120 DNKIP--------QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
D + L L GIG + A+ ++ F T DT+ R+ +G
Sbjct: 117 DASPEGADGVTDAELRAELLGLFGIGGETADDMMLYVFSRRTFVADTYARRLFAFLGFDA 176
Query: 172 GKTPNKVEQSLLRI-----IPPKHQYNAHYWLVLHGRYV 205
++ + + H + G+
Sbjct: 177 PAGYPAFHKAYAPVVLDTGLDVADLQEFHGLIDEFGKAY 215
>gi|122693510|emb|CAL89058.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255330|gb|ACS88649.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317452229|emb|CBL87697.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N L+ G +C
Sbjct: 120 PNESFNHTQALIDLGALICSP 140
>gi|99906158|gb|ABF68676.1| MutY [Helicobacter pylori]
gi|115605729|gb|ABJ15846.1| MutY [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|242255252|gb|ACS88610.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|315038427|ref|YP_004031995.1| hypothetical protein LA2_06255 [Lactobacillus amylovorus GRL 1112]
gi|312276560|gb|ADQ59200.1| hypothetical protein LA2_06255 [Lactobacillus amylovorus GRL 1112]
Length = 217
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 75/192 (39%), Gaps = 12/192 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
L +++ + P G + + +I + +L + NV KA L+ D
Sbjct: 1 MEKITLNQLYDIMYDHM-DPTGWWPGRSDWEVIWSTILIQNTNWKNVAKALTSLYYATDF 59
Query: 80 -PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN--------KIPQTLEGL 130
PQ +L + ++L I + G Y +K++ I +++ + FD + + +
Sbjct: 60 LPQNILNMTNEELSKMIASAGFYTRKTQTIKNVATYFNDNFDCDLELAQEQNKRKLRQEI 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKH 190
+ GIG + A+VIL VDT+ R+ +G K + + + +
Sbjct: 120 LSIHGIGPETADVILMYGLRKGEFVVDTYSRRLFTCLGWKNVPPYEKAKVLIEKNLDNFT 179
Query: 191 QYNAH--YWLVL 200
N + ++
Sbjct: 180 LRNYQNFHAMID 191
>gi|122693211|emb|CAL88910.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKRSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALIC 138
>gi|122692848|emb|CAL88727.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693702|emb|CAL89154.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693351|emb|CAL88980.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSRLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|188996625|ref|YP_001930876.1| HhH-GPD family protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931692|gb|ACD66322.1| HhH-GPD family protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 206
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
L++++ K+ + + + +L+ ++ NV KA ++L +
Sbjct: 3 LKDVYNKLFEKYGYQNWWPVHEGQNSIVEITFGAVLTQNTSWKNVEKAIENLIKHNMLNF 62
Query: 82 KMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ + + + L+ IR G Y +K++ + S+S + + + I + L + G+G++
Sbjct: 63 EKVYCSDIEFLKELIRPAGFYNQKAKTLKSVSKLFLEKPHKDITRE--DLLSIKGVGKET 120
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLA-PGKTPNKVEQSLLRIIPPKH--QYNAHYW 197
A+ IL A P +D + R R+ L + ++ + + I H
Sbjct: 121 ADSILLYALNKPYFVIDAYTKRFLKRLSLVSDKIDYDSLQSFITQNIEMDLEIYKEFHAL 180
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
+V H + +C +KP+C+ C C+R+
Sbjct: 181 IVKHCKELCT-KKPKCEVCFFK--CERL 205
>gi|122693970|emb|CAL89290.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSRLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|122693884|emb|CAL89247.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|308233461|ref|ZP_07664198.1| endonuclease III [Atopobium vaginae DSM 15829]
Length = 50
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
+L+++PP + + + GR +CKA+ P C++CI LC +
Sbjct: 1 MLKLLPPTLWSSVNEEWIHFGREICKAKNPCCETCIARALCPSYAK 46
>gi|122693800|emb|CAL89203.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693734|emb|CAL89170.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075313|emb|CAD11052.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692820|emb|CAL88713.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + Y +++N+ + I + E ++++P + L +LPGIG AN IL F
Sbjct: 21 EKVLLLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGF 80
Query: 150 GIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
T VD +I R+ GL P ++ + P +N + L+ G +C
Sbjct: 81 REKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLNPNESFNHNQALIDLGALICSP 140
>gi|296453781|ref|YP_003660924.1| HhH-GPD family protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183212|gb|ADH00094.1| HhH-GPD family protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 230
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 15/198 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P+ +E ++ + P G F ++V +L+ + NV+++ L
Sbjct: 18 PERIELLYRTMADALG-PTGWWPAETTFEIMVGAVLTQNTAWSNVDRSLAALKAEDVLEP 76
Query: 82 KMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTR 132
L E + LQ IR G Y KS+ + SLS + + L
Sbjct: 77 HALVAMEPERLQELIRPSGFYVNKSKTVQSLSWWYVERCGAAPEGAAAISDAELRAELLG 136
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIP 187
L GIG + A+ ++ F T DT+ R+ +G ++ +
Sbjct: 137 LFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPAGYLAFHRAYSPVVLDTNLS 196
Query: 188 PKHQYNAHYWLVLHGRYV 205
K H + G+
Sbjct: 197 VKDLQEFHGLIDEFGKAY 214
>gi|122692896|emb|CAL88751.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLETFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692774|emb|CAL88690.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693343|emb|CAL88976.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693440|emb|CAL89023.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255316|gb|ACS88642.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQNKADDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693644|emb|CAL89125.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKADDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|93004316|gb|ABE97078.1| MutY [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693410|emb|CAL89010.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693788|emb|CAL89197.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693008|emb|CAL88807.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|14325535|dbj|BAB60438.1| endonuclease III [Thermoplasma volcanium GSS1]
Length = 244
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 9/205 (4%)
Query: 21 TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-ADT 79
P I+ + G +++ +L+ ++ NV KA +L
Sbjct: 17 NPPNFANIYEELFRYYGD-LGWWPAETKDEIVIGAILTQNTSWKNVEKAIANLKSHGITK 75
Query: 80 PQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD-----NKIPQTLEGLTRLP 134
+ + I + ++ IR+ G Y +K+E + ++S +++ EF+ I E L +
Sbjct: 76 LEDVCKIEKNEIAKLIRSSGFYNQKAERLKAVSCLIVGEFNGIDRIKDIDAFAERLKSIK 135
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNA 194
GIG++ N IL A P +D + R R K + ++ K N
Sbjct: 136 GIGQETLNSILLYALDAPVFVIDKYTVRFLERYSSFDEVDSIK-KSVEEQLADVKLMQNF 194
Query: 195 HYWLVLHGRYVCKARKPQCQSCIIS 219
H +V + C+ ++P C C +
Sbjct: 195 HAMIVQLSKDFCR-KEPICMKCPLK 218
>gi|122692922|emb|CAL88764.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICCP 140
>gi|122692894|emb|CAL88750.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKADEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692870|emb|CAL88738.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317452211|emb|CBL87688.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICSP 140
>gi|317452231|emb|CBL87698.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692778|emb|CAL88692.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693317|emb|CAL88963.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693325|emb|CAL88967.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693486|emb|CAL89046.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693778|emb|CAL89192.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|317452247|emb|CBL87706.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693980|emb|CAL89295.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHTKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692670|emb|CAL88637.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693094|emb|CAL88851.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693259|emb|CAL88934.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693347|emb|CAL88978.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693371|emb|CAL88990.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693488|emb|CAL89047.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|326334566|ref|ZP_08200777.1| endonuclease III domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325693335|gb|EGD35263.1| endonuclease III domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 204
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 73/188 (38%), Gaps = 12/188 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
+ + + + N + ++++L Q+T N +A +L + + +
Sbjct: 7 VLNKLLAHYGK-QNWWNHPNRLSDWISMILIQQTTQQNAERALANLEGKL-SVAILHTME 64
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLPGIGRKG 140
E++LQ IR G Y++KS I +L ++ L + GIG +
Sbjct: 65 EEELQVLIRPAGFYKQKSTYIKALMAWYVSHGASLEKFTAIPTESLRTELLSIKGIGEET 124
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQYNAHYW 197
A+ +L FG D + R+ NR+GL T + + + ++ + H
Sbjct: 125 ADAMLLYIFGRNVFIADQYALRLFNRLGLTTATTYKALREECMPLVADISLETCQEWHAV 184
Query: 198 LVLHGRYV 205
+ HG+
Sbjct: 185 IDEHGKAY 192
>gi|4467641|emb|CAB37772.1| MutY protein [Helicobacter pylori]
gi|115605727|gb|ABJ15845.1| MutY [Helicobacter pylori]
gi|122693012|emb|CAL88809.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693152|emb|CAL88880.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693203|emb|CAL88906.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693205|emb|CAL88907.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693299|emb|CAL88954.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693474|emb|CAL89040.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693558|emb|CAL89082.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693574|emb|CAL89090.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693724|emb|CAL89165.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693728|emb|CAL89167.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693824|emb|CAL89215.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693852|emb|CAL89231.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693986|emb|CAL89298.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805312|gb|ADE41786.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805334|gb|ADE41797.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805354|gb|ADE41807.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805372|gb|ADE41816.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805394|gb|ADE41827.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805418|gb|ADE41839.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805460|gb|ADE41860.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452203|emb|CBL87684.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452235|emb|CBL87700.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452237|emb|CBL87701.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693297|emb|CAL88953.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317452213|emb|CBL87689.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I + GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKCVLLRLFGLDPNIHAKDLQIKANEFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255194|gb|ACS88581.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|122692776|emb|CAL88691.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805440|gb|ADE41850.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|167951084|ref|ZP_02538158.1| A/G-specific adenine glycosylase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 180
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + ++ ++ Q+ V + A E ++ + +G Y ++
Sbjct: 10 DPYRVWISEIMLQQTQVAKVIPYFNRFMARFPDLASLAAAAEDEVLHLWSGLGYYA-RAR 68
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
N+ +L F + P+ +E L LPGIGR
Sbjct: 69 NLRKADEVLQGHFSGRFPEAIEALESLPGIGRSKRW 104
>gi|139438730|ref|ZP_01772214.1| Hypothetical protein COLAER_01216 [Collinsella aerofaciens ATCC
25986]
gi|133775810|gb|EBA39630.1| Hypothetical protein COLAER_01216 [Collinsella aerofaciens ATCC
25986]
Length = 301
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Query: 41 GELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRT 97
+L + + + + ++ ++ Q+ V + T Q + + + +
Sbjct: 19 RDLPWRRTRDPYIIWLSEVMLQQTQVPRVETRMPAWLDRFPTVQALAQAVPSDVLDAWQG 78
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+G R+ + + ++ ++D + P+ L LPGIG A I S AF +P + ++
Sbjct: 79 MGYNRRALA-LHRAAQCVVEDWDGEFPRETRDLVALPGIGPATAQGIRSFAFDLPGVYLE 137
Query: 158 THIFRISNRIGL 169
T++ +
Sbjct: 138 TNVRTVFLHHFF 149
>gi|122693177|emb|CAL88893.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|292805484|gb|ADE41872.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805404|gb|ADE41832.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805486|gb|ADE41873.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|210631992|ref|ZP_03297157.1| hypothetical protein COLSTE_01050 [Collinsella stercoris DSM 13279]
gi|210159794|gb|EEA90765.1| hypothetical protein COLSTE_01050 [Collinsella stercoris DSM 13279]
Length = 366
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 27/190 (14%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
P + + + + ++ ++ Q+ V + + + G +
Sbjct: 16 RLYRDLPWRRT----RDPYEIWLSEVMLQQTQVARVETRWAEWLDRFPSVFALAEAGTAE 71
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G R+ + + ++ +D P ++ LT LPGIG A I S AF
Sbjct: 72 VLAAWQGMGYNRRALAL-KAAAEEVVRTYDGVFPTGVKELTALPGIGPATAQGIRSFAFD 130
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK 210
+P + ++T++ + + E LV R C
Sbjct: 131 LPGVYLETNVRTVLLHHLFPDVPSVPDKE------------------LVPLVRATC---- 168
Query: 211 PQCQSCIISN 220
P +C++ N
Sbjct: 169 PDGGACVLEN 178
>gi|242255264|gb|ACS88616.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLADAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694059|emb|CAL89335.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYPPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693744|emb|CAL89175.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805492|gb|ADE41876.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805522|gb|ADE41891.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075327|emb|CAD11059.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692836|emb|CAL88721.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693520|emb|CAL89063.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694133|emb|CAL89372.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805248|gb|ADE41754.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805260|gb|ADE41760.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18408516|ref|NP_566893.1| HhH-GPD base excision DNA repair protein-related [Arabidopsis
thaliana]
gi|332644814|gb|AEE78335.1| HhH-GPD base excision DNA repair protein-related protein
[Arabidopsis thaliana]
Length = 293
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 21/187 (11%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V +LLS +T+ N +A L +L K ++N IR G+ KK+ I ++
Sbjct: 100 LVKILLSQNTTESNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNI 159
Query: 112 SHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
+ L NE + L+ G+G K + +L VDTH+F
Sbjct: 160 LNRLQNERGRLCLEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFE 219
Query: 163 ISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVC----------KARKP 211
I+ +G P NK L R IP + +++ + L HG+ +C KA+
Sbjct: 220 IAKALGWVPKTADRNKTYVHLNRKIPDELKFDLNCLLYTHGK-ICSNCKKNVAKPKAKVA 278
Query: 212 QCQSCII 218
C +
Sbjct: 279 SPDDCPL 285
>gi|122693390|emb|CAL89000.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLVPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075349|emb|CAD11070.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|18075353|emb|CAD11072.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694069|emb|CAL89340.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694091|emb|CAL89351.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693142|emb|CAL88875.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693144|emb|CAL88876.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G VC
Sbjct: 120 LNESFNHNQALIDLGALVCSP 140
>gi|18075339|emb|CAD11065.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694077|emb|CAL89344.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|325969490|ref|YP_004245682.1| iron-sulfur cluster loop [Vulcanisaeta moutnovskia 768-28]
gi|323708693|gb|ADY02180.1| iron-sulfur cluster loop [Vulcanisaeta moutnovskia 768-28]
Length = 307
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GR +C KPQC C + LC +
Sbjct: 263 LWRLGRTICIRDKPQCDKCPLRGLCSAYAR 292
>gi|122694002|emb|CAL89306.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693148|emb|CAL88878.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|326928198|ref|XP_003210268.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Meleagris
gallopavo]
Length = 193
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 18/183 (9%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
V +K+ Y + +P F P P+ + + + L++A
Sbjct: 22 VDRRKTSPYFSSKYSKEAPSPPRR----KAFRKWTP-PRSPFNLVQETLFHDPWKLLIAT 76
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ +P+ K++ +R +G+Y +++ II S
Sbjct: 77 IFLNKTSGKMAIPVLWEFLRKYPSPEIARTADWKEMSELLRPLGLYALRAKTIIKFSDEY 136
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+N+ L GIG+ G + L
Sbjct: 137 LNKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHTWLWENHEK 189
Query: 176 NKV 178
V
Sbjct: 190 LSV 192
>gi|122692846|emb|CAL88726.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G VC
Sbjct: 120 LNESFNHNQALIDLGALVCSP 140
>gi|122692684|emb|CAL88645.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVRRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|125596638|gb|EAZ36418.1| hypothetical protein OsJ_20749 [Oryza sativa Japonica Group]
Length = 277
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIIS 110
+V LLS +TD +A L T +++ E K L++ IR G+ K+ I +
Sbjct: 80 LVTTLLSQNTTDAISRRAFAALKAAFPTWDQVVDEEEGKRLEDAIRCGGLAATKAARIRA 139
Query: 111 LSHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + + L+R GIG K +L VDTH+
Sbjct: 140 MLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVACVLMFYLQKDDFPVDTHVL 199
Query: 162 RISNRIGLAPGKTPNKVEQSLLRI---IPPKHQYNAHYWLVLHGRYVCKARKPQCQS--- 215
RI+N IG P E++ L + IP +++ + V HG+ C++ C
Sbjct: 200 RITNAIGWVPATASR--ERAYLHLNSKIPDDLKFDLNCLFVTHGKL-CQS----CSKKLG 252
Query: 216 ----------CIISNLC 222
C +++ C
Sbjct: 253 GQKTTGSNSMCPLASYC 269
>gi|122692854|emb|CAL88730.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692856|emb|CAL88731.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692864|emb|CAL88735.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693822|emb|CAL89214.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255262|gb|ACS88615.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692790|emb|CAL88698.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNTHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693908|emb|CAL89259.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692938|emb|CAL88772.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692698|emb|CAL88652.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692704|emb|CAL88655.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692710|emb|CAL88658.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805464|gb|ADE41862.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|307595236|ref|YP_003901553.1| iron-sulfur cluster loop [Vulcanisaeta distributa DSM 14429]
gi|307550437|gb|ADN50502.1| iron-sulfur cluster loop [Vulcanisaeta distributa DSM 14429]
Length = 307
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
L GR +C KPQC C + +C +
Sbjct: 263 LWRFGRTICVRDKPQCDKCPLKGVCSAYAR 292
>gi|122693355|emb|CAL88982.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693165|emb|CAL88887.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693341|emb|CAL88975.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSRLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255292|gb|ACS88630.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|327311608|ref|YP_004338505.1| iron-sulfur cluster loop containing protein [Thermoproteus
uzoniensis 768-20]
gi|326948087|gb|AEA13193.1| iron-sulfur cluster loop containing protein [Thermoproteus
uzoniensis 768-20]
Length = 294
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKR 224
GR VC P+C C ++CK
Sbjct: 253 FGRRVCTREAPKCGQCPFRSVCKA 276
>gi|122693946|emb|CAL89278.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYFPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692708|emb|CAL88657.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692872|emb|CAL88739.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
P +N + L+ G +C
Sbjct: 120 PNESFNHNQALIDLGALICCP 140
>gi|99906162|gb|ABF68678.1| MutY [Helicobacter pylori]
gi|99906186|gb|ABF68690.1| MutY [Helicobacter pylori]
gi|122692680|emb|CAL88643.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692688|emb|CAL88647.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694125|emb|CAL89368.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255326|gb|ACS88647.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692780|emb|CAL88693.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692784|emb|CAL88695.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|323456431|gb|EGB12298.1| hypothetical protein AURANDRAFT_5189 [Aureococcus anophagefferens]
Length = 202
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 28/195 (14%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V +LS +TD A + L T ++LA + +R G+ K E + ++
Sbjct: 10 LVRTILSQNTTDKTSLVAFERLKAGLPTWSEVLAAPAGVAEELVRCGGLAEVKMERVRAI 69
Query: 112 --------------SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+ + L+ G+G K + ++ G VD
Sbjct: 70 LADPRVAGRGAAGEPCLQWLHGERDDAVVKRTLSSFKGVGPKTVSCVMMFTMGRAEFPVD 129
Query: 158 THIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ-- 214
TH+ I+ P T K + L R +P + ++ H LV HG+ C +C
Sbjct: 130 THVLHIAKMCKWLPEAATREKAYEHLNRRVPDEVKFALHVLLVEHGK-CCT----RCAKN 184
Query: 215 ------SCIISNLCK 223
C ++ C
Sbjct: 185 GKLQKKECALAGPCP 199
>gi|317452209|emb|CBL87687.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467635|emb|CAB37769.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRKKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075355|emb|CAD11073.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694087|emb|CAL89349.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|93004322|gb|ABE97081.1| MutY [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ L P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFSLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|51535148|dbj|BAD37860.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa
Japonica Group]
gi|51535812|dbj|BAD37897.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa
Japonica Group]
gi|218197872|gb|EEC80299.1| hypothetical protein OsI_22321 [Oryza sativa Indica Group]
Length = 277
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIIS 110
+V LLS +TD +A L T +++ E K L++ IR G+ K+ I +
Sbjct: 80 LVTTLLSQNTTDAISRRAFAALKAAFPTWDQVVDEEEGKRLEDAIRCGGLAATKAARIRA 139
Query: 111 LSHILINEFDNKIPQT---------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + + L+R GIG K +L VDTH+
Sbjct: 140 MLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVACVLMFYLQKDDFPVDTHVL 199
Query: 162 RISNRIGLAPGKTPNKVEQSLLRI---IPPKHQYNAHYWLVLHGRYVCKARKPQCQS--- 215
RI+N IG P E++ L + IP +++ + V HG+ C++ C
Sbjct: 200 RITNAIGWVPATASR--ERAYLHLNSKIPDDLKFDLNCLFVTHGKL-CQS----CSKKLG 252
Query: 216 ----------CIISNLC 222
C +++ C
Sbjct: 253 GQKTTGSNSMCPLASYC 269
>gi|122694107|emb|CAL89359.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ + GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKCVLLRFFGLDPNIHAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|224133424|ref|XP_002321564.1| predicted protein [Populus trichocarpa]
gi|222868560|gb|EEF05691.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISL 111
+V +LS +T+VN +A +L T + +LA K +++ IR G+ K+ I ++
Sbjct: 116 LVKTVLSQNTTEVNSQRAFLNLKSAFPTWENVLAAESKFIEDAIRCGGLAPTKAACIRNI 175
Query: 112 SHILINEFDNKIPQTLEGL---------TRLPGIGRKGANVILSMAFGIPTIGVDTHIFR 162
L+ + + L L + GIG K +L VDTH+F
Sbjct: 176 LSSLMEKKGRLCLEYLRDLPVAEIKAELSHFKGIGPKTVACVLMFNLQKDDFPVDTHVFE 235
Query: 163 ISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKARK--------P 211
I+ IG P NK L IP + +++ + L HG+ C +
Sbjct: 236 IAKAIGWVPPVADRNKTYLHLNHRIPKELKFDLNCLLYTHGKLCRKCTKKSGSQQRKETH 295
Query: 212 QCQSCIISNLC 222
SC + N C
Sbjct: 296 D-DSCPLLNYC 305
>gi|122692668|emb|CAL88636.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSTCVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075333|emb|CAD11062.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692842|emb|CAL88724.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693768|emb|CAL89187.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694073|emb|CAL89342.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692712|emb|CAL88659.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954097|gb|ACG58754.1| MutY [Helicobacter pylori]
gi|195954099|gb|ACG58755.1| MutY [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075331|emb|CAD11061.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122693146|emb|CAL88877.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693618|emb|CAL89112.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694061|emb|CAL89336.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692674|emb|CAL88639.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693556|emb|CAL89081.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122704492|emb|CAL88640.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805494|gb|ADE41877.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075311|emb|CAD11051.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692816|emb|CAL88711.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|33150919|gb|AAP97338.1| methyl-CpG binding domain protein 4 variant [Homo sapiens]
gi|119599658|gb|EAW79252.1| methyl-CpG binding domain protein 4, isoform CRA_b [Homo sapiens]
Length = 540
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/132 (9%), Positives = 43/132 (32%), Gaps = 11/132 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTL 127
+ + +
Sbjct: 524 LTKQWKYPIELH 535
>gi|122694153|emb|CAL89382.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|4467645|emb|CAB37774.1| MutY protein [Helicobacter pylori]
gi|18075357|emb|CAD11074.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|99906174|gb|ABF68684.1| MutY [Helicobacter pylori]
gi|115605723|gb|ABJ15843.1| MutY [Helicobacter pylori]
gi|122693207|emb|CAL88908.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693438|emb|CAL89022.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693672|emb|CAL89139.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693944|emb|CAL89277.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693978|emb|CAL89294.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694020|emb|CAL89315.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694085|emb|CAL89348.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255302|gb|ACS88635.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805242|gb|ADE41751.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805266|gb|ADE41763.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805410|gb|ADE41835.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805462|gb|ADE41861.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805512|gb|ADE41886.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452207|emb|CBL87686.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452243|emb|CBL87704.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317453086|emb|CBL87717.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317453090|emb|CBL87719.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|322688737|ref|YP_004208471.1| endonuclease III [Bifidobacterium longum subsp. infantis 157F]
gi|322690721|ref|YP_004220291.1| endonuclease III [Bifidobacterium longum subsp. longum JCM 1217]
gi|320455577|dbj|BAJ66199.1| putative endonuclease III [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460073|dbj|BAJ70693.1| putative endonuclease III [Bifidobacterium longum subsp. infantis
157F]
Length = 227
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 15/210 (7%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + + +P +E ++ + P G F ++V +L+ + NVN++
Sbjct: 3 NRSAKRVPGVPSPAYIESLYRTMAAALG-PTGWWPAETTFEIMVGAVLTQNTAWGNVNRS 61
Query: 70 TKHLFEI-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------D 120
L P K+ +G LQ IR G Y KS+ + SLS + D
Sbjct: 62 LAALNAEGVLEPHKLAIMGPAHLQELIRPSGFYVNKSKTVQSLSRWYVERCGASPEGAAD 121
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+ L L GIG + A+ ++ F T DT+ R+ +G +
Sbjct: 122 IPDAELRTELLGLFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPTGYLAFHK 181
Query: 181 SL-----LRIIPPKHQYNAHYWLVLHGRYV 205
+ + K H + G+
Sbjct: 182 AYSPVVLDASLSVKDLQEFHGLIDEFGKAY 211
>gi|122693422|emb|CAL89016.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693050|emb|CAL88829.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692986|emb|CAL88796.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693028|emb|CAL88817.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255298|gb|ACS88633.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692996|emb|CAL88801.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692998|emb|CAL88802.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692812|emb|CAL88709.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693402|emb|CAL89006.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693812|emb|CAL89209.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693406|emb|CAL89008.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692988|emb|CAL88797.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075343|emb|CAD11067.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694071|emb|CAL89341.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + Y +++N+ + I + E +++P + L +LPGIG AN IL F
Sbjct: 21 EKVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGF 80
Query: 150 GIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
T VD ++ R+ GL P ++ + P +N + L+ G +C
Sbjct: 81 RGKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLNPNESFNHNQALIDLGALICSP 140
>gi|292805408|gb|ADE41834.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|320535921|ref|ZP_08035989.1| base excision DNA repair protein, HhH-GPD family [Treponema
phagedenis F0421]
gi|320147225|gb|EFW38773.1| base excision DNA repair protein, HhH-GPD family [Treponema
phagedenis F0421]
Length = 139
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEI 76
+ K++E+ + + + + + ++V+ + Q+ V E
Sbjct: 3 LSSKQIEDFQKRIINYYKAHGRNFPWRETADPYEIMVSEFMLQQTQTERVVPKYLGWLER 62
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI 136
T + + + +G +++ + + L + Q L+ P +
Sbjct: 63 FPTVKDLADTDFMSVLTMWSGLGY-NRRARFLHEAAKKLFPSIKERFLQILKICKNFPEL 121
Query: 137 GR 138
GR
Sbjct: 122 GR 123
>gi|122693293|emb|CAL88951.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693225|emb|CAL88917.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692910|emb|CAL88758.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692946|emb|CAL88776.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693044|emb|CAL88826.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692758|emb|CAL88682.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693794|emb|CAL89200.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805458|gb|ADE41859.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 FDESFNHNQALIDLGALICSP 140
>gi|122693090|emb|CAL88849.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQTKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692940|emb|CAL88773.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692950|emb|CAL88778.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692746|emb|CAL88676.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692912|emb|CAL88759.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692786|emb|CAL88696.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|99906154|gb|ABF68674.1| MutY [Helicobacter pylori]
gi|99906176|gb|ABF68685.1| MutY [Helicobacter pylori]
gi|122693138|emb|CAL88873.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693213|emb|CAL88911.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693712|emb|CAL89159.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805412|gb|ADE41836.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|159122487|gb|EDP47608.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 470
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L + + L + PGIG K A ++ P VDTHIF
Sbjct: 307 EYEIACADQNFLSLNHLHTLSTEDAMTELVKYPGIGPKTAACVILFCLQRPCFAVDTHIF 366
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RI +G P +V L IP +Y+ H L+ HG+ C P+C
Sbjct: 367 RICKWLGWVPPGKATEVTAFSHLEVRIPDHLKYSLHQLLIRHGKT-C----PRC 415
>gi|122692734|emb|CAL88670.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693016|emb|CAL88811.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255258|gb|ACS88613.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255260|gb|ACS88614.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
GL +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 GLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|119467552|ref|XP_001257582.1| hypothetical protein NFIA_050280 [Neosartorya fischeri NRRL 181]
gi|119405734|gb|EAW15685.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 473
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L + + L + PGIG K A ++ P VDTHIF
Sbjct: 310 EYEIACADQNFLSLNHLHTLSTEDAMTELVKYPGIGPKTAACVILFCLQRPCFAVDTHIF 369
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RI +G P +V L IP +Y+ H L+ HG+ C P+C
Sbjct: 370 RICKWLGWVPPGKATEVTAFSHLEVRIPDHLKYSLHQLLIRHGKT-C----PRC 418
>gi|122693199|emb|CAL88904.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
GL +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 GLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694030|emb|CAL89320.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|99906160|gb|ABF68677.1| MutY [Helicobacter pylori]
gi|99906164|gb|ABF68679.1| MutY [Helicobacter pylori]
gi|122693424|emb|CAL89017.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805330|gb|ADE41795.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255266|gb|ACS88617.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692838|emb|CAL88722.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|148655164|ref|YP_001275369.1| HhH-GPD family protein [Roseiflexus sp. RS-1]
gi|148567274|gb|ABQ89419.1| HhH-GPD family protein [Roseiflexus sp. RS-1]
Length = 296
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 65/265 (24%)
Query: 23 KELEEIFYLFSLKWPSPKGELYY---VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-D 78
+ L F + F ++V +L Q+ V A L +
Sbjct: 9 ERLLACFAALDEHFGHEPHWWPVITDDPPFEVLVGAVLVQQTRWETVETAIIRLRDAGLM 68
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ--------TLEGL 130
+P+++ + L IR + +K+ + ++ ++ E+D + L
Sbjct: 69 SPERLATVTTDSLAALIRPCAFHAQKATGLHAICREIVQEYDGDTTRLLTGDRMTVRNRL 128
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNK---------VEQS 181
LP IGR+ A+ I+ G VD + R+ R+ LAPG + VE +
Sbjct: 129 LALPRIGRETADTIMLYGGGWSLFVVDAYARRLFARLDLAPGFDFLRAPYDAVQRLVEHA 188
Query: 182 LLRIIPPK----------------------HQYNAHYWLVLHGRYVCKARKPQCQS---- 215
L+ ++P H ++ + C AR P+C
Sbjct: 189 LIPLLPEVSITVRENFHVHRAIEANGSSTFFFAQFHALIIEACVHHCLARHPRCNQPGAR 248
Query: 216 ------------------CIISNLC 222
C + C
Sbjct: 249 RTFADPRKCATHCLTCSGCPLRERC 273
>gi|18075347|emb|CAD11069.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694063|emb|CAL89337.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317452201|emb|CBL87683.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693878|emb|CAL89244.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693189|emb|CAL88899.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITVKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692682|emb|CAL88644.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693898|emb|CAL89254.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LSESFNHNQALIDLGALICSP 140
>gi|292805350|gb|ADE41805.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255322|gb|ACS88645.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIMAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693996|emb|CAL89303.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693373|emb|CAL88991.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693434|emb|CAL89220.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693820|emb|CAL89213.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694099|emb|CAL89355.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954087|gb|ACG58749.1| MutY [Helicobacter pylori]
gi|195954089|gb|ACG58750.1| MutY [Helicobacter pylori]
gi|195954091|gb|ACG58751.1| MutY [Helicobacter pylori]
gi|195954101|gb|ACG58756.1| MutY [Helicobacter pylori]
gi|195954109|gb|ACG58760.1| MutY [Helicobacter pylori]
gi|317453092|emb|CBL87720.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317452265|emb|CBL87715.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDYLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692958|emb|CAL88782.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L++LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLSKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692860|emb|CAL88733.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692926|emb|CAL88766.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|300361703|ref|ZP_07057880.1| deoxyribonuclease (pyrimidine dimer) [Lactobacillus gasseri JV-V03]
gi|300354322|gb|EFJ70193.1| deoxyribonuclease (pyrimidine dimer) [Lactobacillus gasseri JV-V03]
Length = 216
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 11/190 (5%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
+L E++ L P G + + +I + +L + NV+KA L++ +
Sbjct: 1 MKKIDLNELYDLMYDHL-DPNGWWPGRSDWQVIWSTILIQNTNWKNVDKALATLYQATNF 59
Query: 80 PQKMLAIGEKKL--------QNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
+ + Y R ++ + L Q L
Sbjct: 60 WPENILKTPDDKLERAIASAGFYTRKAATLKRLATYFQKYDFDLDKCRQLSKDQLRSELL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ 191
+ GIG + A+VIL VD + R+ N + + K + + I
Sbjct: 120 SIKGIGPETADVILMYGIQKGEFVVDKYARRLFNCLDYQLPVSYQKAKDLVEANINHFTL 179
Query: 192 YNAH--YWLV 199
N + ++
Sbjct: 180 RNYQNFHAMI 189
>gi|122693062|emb|CAL88835.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693988|emb|CAL89299.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692980|emb|CAL88793.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 SNESFNHNQALIDLGALICSP 140
>gi|122693570|emb|CAL89088.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693592|emb|CAL89099.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693624|emb|CAL89115.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693066|emb|CAL88837.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693110|emb|CAL88859.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQTKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
A L+ G VC+ARKP C SC +S C
Sbjct: 621 RMASLRLI--GNTVCRARKPACGSCPVSAFC 649
>gi|122692994|emb|CAL88800.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692702|emb|CAL88654.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805250|gb|ADE41755.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRGKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|309800490|ref|ZP_07694644.1| A/G-specific adenine glycosylase [Streptococcus infantis SK1302]
gi|308115885|gb|EFO53407.1| A/G-specific adenine glycosylase [Streptococcus infantis SK1302]
Length = 68
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 6/58 (10%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHL 73
++ ++ + K +L + N + + V+ ++ Q+ V
Sbjct: 11 MWEEDKILSFRQKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPIMNVF 68
>gi|122693263|emb|CAL88936.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694040|emb|CAL89325.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692966|emb|CAL88786.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255256|gb|ACS88612.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467623|emb|CAB37763.1| MutY protein [Helicobacter pylori]
gi|122693158|emb|CAL88883.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805422|gb|ADE41841.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255308|gb|ACS88638.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693185|emb|CAL88897.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693187|emb|CAL88898.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|114589115|ref|XP_001143883.1| PREDICTED: methyl-CpG binding domain protein 4 isoform 4 [Pan
troglodytes]
Length = 538
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/138 (10%), Positives = 43/138 (31%), Gaps = 11/138 (7%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 403 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 457
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S I
Sbjct: 458 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSGIF 517
Query: 116 INEFDNKIPQTLEGLTRL 133
+ I
Sbjct: 518 LYTQRKNIIHCAYLREPH 535
>gi|242255200|gb|ACS88584.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693426|emb|CAL89018.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+ +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692804|emb|CAL88705.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|23465650|ref|NP_696253.1| endonuclease III [Bifidobacterium longum NCC2705]
gi|23326324|gb|AAN24889.1| possible endonuclease III [Bifidobacterium longum NCC2705]
Length = 230
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 15/210 (7%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + + +P +E ++ + P G F ++V +L+ + NVN++
Sbjct: 6 NRSAKRVPGVPSPAYIESLYRTMAAALG-PTGWWPAETTFEIMVGAVLTQNTAWGNVNRS 64
Query: 70 TKHLFEI-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------D 120
L P K+ +G LQ IR G Y KS+ + SLS + D
Sbjct: 65 LAALNAEGVLEPHKLAIMGPAHLQELIRPSGFYVNKSKTVQSLSRWYVERCGASPEGAAD 124
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+ L L GIG + A+ ++ F T DT+ R+ +G +
Sbjct: 125 IPDAELRTELLGLFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDAPAGYLAFHK 184
Query: 181 SL-----LRIIPPKHQYNAHYWLVLHGRYV 205
+ + K H + G+
Sbjct: 185 AYSPVVLDASLSVKDLQEFHGLIDEFGKAY 214
>gi|242255272|gb|ACS88620.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPHIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693874|emb|CAL89242.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ L P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFSLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|108862332|gb|ABA96719.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1795
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 21/177 (11%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNH------------------FTLIVAVLLSAQSTDVNV 66
+ + + + +L + + + V+ ++ Q+ V
Sbjct: 52 AAAVRAELLRWYDANRRDLPWRRAAEPAGSGSGSGRGEEKRAYAVWVSEVMLQQTRVPVV 111
Query: 67 NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT 126
T + A ++++ +G YR+ + I+ +
Sbjct: 112 VDYYSRWMARWPTVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPRTAS- 170
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL 183
L + GIG A I S+AF VD ++ IS + + +
Sbjct: 171 --ALREVRGIGDYTAGAIASIAFNEVVPVVDGNVRVISRLYAIPDNPKESSTVKRFC 225
>gi|122693227|emb|CAL88918.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467625|emb|CAB37764.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693054|emb|CAL88831.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKRACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|116193597|ref|XP_001222611.1| hypothetical protein CHGG_06516 [Chaetomium globosum CBS 148.51]
gi|88182429|gb|EAQ89897.1| hypothetical protein CHGG_06516 [Chaetomium globosum CBS 148.51]
Length = 549
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 10/115 (8%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TP 175
+ + + PGIG K A + P VDTH+ + +G P K P
Sbjct: 392 HMRAMSKDEAMAKFLSYPGIGIKTAACVTLFCLQKPCFAVDTHVHKFCRWLGWVPDKADP 451
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--C-KARKP------QCQSCIISNL 221
+ + ++P +Y H + HG+ C KA KP + C + +L
Sbjct: 452 DNCFRHGDFMVPDHLKYGLHQLFIRHGQTCFKCKKATKPGTKDWNEAPDCPLEHL 506
>gi|242255304|gb|ACS88636.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLNPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693046|emb|CAL88827.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693084|emb|CAL88846.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRKKSACVDANIKRVLLRLFGLNPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693006|emb|CAL88806.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|86742963|ref|YP_483363.1| hypothetical protein Francci3_4288 [Frankia sp. CcI3]
gi|86569825|gb|ABD13634.1| hypothetical protein Francci3_4288 [Frankia sp. CcI3]
Length = 53
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA 59
+PL + I L P + L++ N L+VA +LSA
Sbjct: 7 AAAETPLA---KTRRARRIVRLLGDIHPDARIALHFDNALELLVATVLSA 53
>gi|18075351|emb|CAD11071.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694089|emb|CAL89350.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693418|emb|CAL89014.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD++I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDSNIKRVLLRLFGLDPNIQAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255210|gb|ACS88589.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805452|gb|ADE41856.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKNLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122703305|emb|CAL88824.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQTKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693245|emb|CAL88927.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANNFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693359|emb|CAL88984.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694004|emb|CAL89307.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|292805420|gb|ADE41840.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805432|gb|ADE41846.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452263|emb|CBL87714.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHTKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|227546249|ref|ZP_03976298.1| deoxyribonuclease (pyrimidine dimer) [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227213230|gb|EEI81102.1| deoxyribonuclease (pyrimidine dimer) [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 227
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 15/210 (7%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + + +P +E ++ + P G F ++V +L+ + NVN++
Sbjct: 3 NRSAKRVPGVPSPAYIESLYRTMAAALG-PTGWWPAETTFEIMVGAVLTQNTAWGNVNRS 61
Query: 70 TKHLFEI-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------D 120
L P K+ +G LQ IR G Y KS+ + SLS + D
Sbjct: 62 LAALNAEGVLEPHKLAIMGPAHLQELIRPSGFYVNKSKTVQSLSRWYVERCGASPEGAAD 121
Query: 121 NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
+ L L GIG + A+ ++ F T DT+ R+ +G +
Sbjct: 122 IPDAELRTELLGLFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPAGYLAFHK 181
Query: 181 SLLRI-----IPPKHQYNAHYWLVLHGRYV 205
+ + + K H + G+
Sbjct: 182 AYSPVVLDTSLSVKDLQEFHGLIDEFGKAY 211
>gi|122693140|emb|CAL88874.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693464|emb|CAL89035.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLSNAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693309|emb|CAL88959.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694127|emb|CAL89369.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANTQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693311|emb|CAL88960.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693319|emb|CAL88964.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693279|emb|CAL88944.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
++ + L+ G +C
Sbjct: 120 LNESFDHNQALIDLGALICSP 140
>gi|122693070|emb|CAL88839.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693076|emb|CAL88842.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|85114220|ref|XP_964657.1| hypothetical protein NCU02035 [Neurospora crassa OR74A]
gi|10303298|emb|CAC10093.1| conserved hypothetical protein [Neurospora crassa]
gi|28926447|gb|EAA35421.1| predicted protein [Neurospora crassa OR74A]
Length = 572
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 10/147 (6%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
++ K E S + L + + + L + PGIG K A +
Sbjct: 419 EMAQMAMENKGTGGKREVAFSETLNLDHMHTVTKDEAMAKLVQYPGIGIKSAACVTLFCL 478
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVLHGRYV--C 206
+P VDTH+ R +G P K + + +P +Y H + HG+ C
Sbjct: 479 RMPCFAVDTHVHRFCRWLGWVPEKANAEDCFRHCDVKVPDHLKYGLHQLFIRHGQQCFKC 538
Query: 207 -KARKP------QCQSCIISNLCKRIK 226
KA +P + C + +L R K
Sbjct: 539 RKATRPGTKEWREAPECPLEHLLDRGK 565
>gi|242255318|gb|ACS88643.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKAACVDANIKRTLLRLFGLDPNIQAKDLQIKADDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693231|emb|CAL88920.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIMAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|171684933|ref|XP_001907408.1| hypothetical protein [Podospora anserina S mat+]
gi|170942427|emb|CAP68079.1| unnamed protein product [Podospora anserina S mat+]
Length = 813
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTP 175
Q +E PGIG K A + +P VDTH+ + +G P P
Sbjct: 543 YMHAMTKDQAMEKFVSFPGIGIKTAACVSLFCLRMPCFAVDTHVHKFCRWLGWTPVKADP 602
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARK------------PQCQSCIISNL 221
+ V + ++P +Y H + HG+ K RK P C + +L
Sbjct: 603 DNVFRHGDFMVPDHLKYGLHQLFIRHGQTCFKCRKNTKPGTKDWLGAPD---CPLEHL 657
>gi|122694115|emb|CAL89363.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRTLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693118|emb|CAL88863.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694053|emb|CAL89332.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|317453094|emb|CBL87721.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693193|emb|CAL88901.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693032|emb|CAL88819.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693038|emb|CAL88822.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693072|emb|CAL88840.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693100|emb|CAL88854.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693102|emb|CAL88855.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693108|emb|CAL88858.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693124|emb|CAL88866.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693934|emb|CAL89272.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693966|emb|CAL89288.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255300|gb|ACS88634.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805238|gb|ADE41749.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805388|gb|ADE41824.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|114589107|ref|XP_001143803.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 3 [Pan
troglodytes]
Length = 540
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/132 (9%), Positives = 43/132 (32%), Gaps = 11/132 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 409 IQRRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLVQETLFHDPWKLLIAT 463
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 464 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 523
Query: 116 INEFDNKIPQTL 127
+ + +
Sbjct: 524 LTKQWKYPIELH 535
>gi|4467611|emb|CAB37757.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|17826790|emb|CAD18960.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|99906172|gb|ABF68683.1| MutY [Helicobacter pylori]
gi|99906188|gb|ABF68691.1| MutY [Helicobacter pylori]
gi|122692678|emb|CAL88642.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692686|emb|CAL88646.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693086|emb|CAL88847.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693106|emb|CAL88857.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693408|emb|CAL89009.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693444|emb|CAL89025.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693506|emb|CAL89056.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693518|emb|CAL89062.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255284|gb|ACS88626.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255288|gb|ACS88628.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255294|gb|ACS88631.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255296|gb|ACS88632.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255310|gb|ACS88639.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255312|gb|ACS88640.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255314|gb|ACS88641.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805448|gb|ADE41854.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|255018264|ref|ZP_05290390.1| endonuclease III (DNA repair) [Listeria monocytogenes FSL F2-515]
Length = 78
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
+ + L + K+ + +P+ EL + N F L+VAV+LSAQ TDV VN+
Sbjct: 2 KKEKGEVQKLLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRV 61
Query: 70 TKHLFEIADTPQKM 83
T LFE +P+
Sbjct: 62 TASLFEKYHSPEDY 75
>gi|122692676|emb|CAL88641.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693398|emb|CAL89004.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694097|emb|CAL89354.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954085|gb|ACG58748.1| MutY [Helicobacter pylori]
gi|195954105|gb|ACG58758.1| MutY [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694129|emb|CAL89370.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692962|emb|CAL88784.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693315|emb|CAL88962.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693333|emb|CAL88971.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255274|gb|ACS88621.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLSLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKAACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LSESFNHNQALIDLGALICSP 140
>gi|122693247|emb|CAL88928.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPHITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692852|emb|CAL88729.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805378|gb|ADE41819.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805380|gb|ADE41820.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452253|emb|CBL87709.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694145|emb|CAL89378.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693392|emb|CAL89001.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692748|emb|CAL88677.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693323|emb|CAL88966.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693339|emb|CAL88974.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075335|emb|CAD11063.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694081|emb|CAL89346.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|332231797|ref|XP_003265081.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 3 [Nomascus
leucogenys]
Length = 538
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 13/132 (9%), Positives = 43/132 (32%), Gaps = 11/132 (8%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVAV 55
+ +K+ Y + +P F P P+ + + + L++A
Sbjct: 407 IERRKTSLYFSSKYNKEALSPPRR----KAFKKWTP-PRSPFNLIQETLFHDPWKLLIAT 461
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ +++ E + + + + ++ +G+Y +++ I+ S
Sbjct: 462 IFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEY 521
Query: 116 INEFDNKIPQTL 127
+ + +
Sbjct: 522 LTKQWKYPIELH 533
>gi|242255268|gb|ACS88618.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255306|gb|ACS88637.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255244|gb|ACS88606.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255246|gb|ACS88607.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693894|emb|CAL89252.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693876|emb|CAL89243.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQSEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693271|emb|CAL88940.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255192|gb|ACS88580.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693818|emb|CAL89212.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692964|emb|CAL88785.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL FG + VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFGEKSACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|77553924|gb|ABA96720.1| A/G-specific adenine DNA glycosylase, putative, expressed [Oryza
sativa Japonica Group]
Length = 215
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C+ KP C C +SN C+ +
Sbjct: 1 MELGATLCRKTKPGCSQCPVSNHCQAL 27
>gi|122693265|emb|CAL88937.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692976|emb|CAL88791.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL FG + VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFGEKSACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|292805284|gb|ADE41772.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDLNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694139|emb|CAL89375.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255190|gb|ACS88579.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCK 223
L L G +C AR P C C +S C+
Sbjct: 600 ALRLIGSTLCHARDPLCDQCPLSQYCE 626
>gi|242255270|gb|ACS88619.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|168027579|ref|XP_001766307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682521|gb|EDQ68939.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 622
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E Y + + ++VA +L ++ ++K FE+ + ++ +K+ I ++G+
Sbjct: 435 EHLYEDPWKVLVACMLLNKTGGRQMHKVIWDFFEMCPNAETCVSTETEKIGTVIHSLGLQ 494
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
K+++ + S + T +T+L G+G + G I
Sbjct: 495 NKRAKTLQRFSQEY-------LGTTWTNVTQLHGVGEYARDAYAIFCEGRWKEVQPKDIV 547
Query: 162 RISNRIGL 169
L
Sbjct: 548 LNDYWQWL 555
>gi|122693912|emb|CAL89261.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693730|emb|CAL89168.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693277|emb|CAL88943.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKADDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693171|emb|CAL88890.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I I E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693197|emb|CAL88903.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693201|emb|CAL88905.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I I E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692782|emb|CAL88694.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|99906156|gb|ABF68675.1| MutY [Helicobacter pylori]
gi|242255276|gb|ACS88622.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255278|gb|ACS88623.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255280|gb|ACS88624.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255282|gb|ACS88625.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255290|gb|ACS88629.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKADDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|145591059|ref|YP_001153061.1| hypothetical protein Pars_0823 [Pyrobaculum arsenaticum DSM 13514]
gi|145282827|gb|ABP50409.1| conserved hypothetical protein [Pyrobaculum arsenaticum DSM 13514]
Length = 297
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C+ KPQC SC +CK K
Sbjct: 256 FGRGICRRVKPQCASCPFREVCKAHK 281
>gi|122693237|emb|CAL88923.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255212|gb|ACS88590.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692770|emb|CAL88688.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693052|emb|CAL88830.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693092|emb|CAL88850.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693223|emb|CAL88916.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693239|emb|CAL88924.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693303|emb|CAL88956.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255224|gb|ACS88596.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693504|emb|CAL89055.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692692|emb|CAL88649.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255240|gb|ACS88604.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|163790656|ref|ZP_02185084.1| hypothetical protein CAT7_11385 [Carnobacterium sp. AT7]
gi|159874104|gb|EDP68180.1| hypothetical protein CAT7_11385 [Carnobacterium sp. AT7]
Length = 217
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ T K+ ++ + + N + V+++L Q+T+ N KA K+L +
Sbjct: 1 MKTDKQKIQVLNQLVDYYG-FQHWWEDDNRISDWVSMILIQQTTEKNAKKALKNLENVL- 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL-------INEFDNKIPQTLEGLT 131
T +++ I +KLQ IR G +++KS I +L + + L
Sbjct: 59 TVEQLQKIEIEKLQELIRPAGFFKQKSLYIKALIQWFVSNGGDFEMFRSYSTAELRKELL 118
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IPP 188
+ G+G + A+ +L F D + R+ +R+G K + + + IP
Sbjct: 119 SIKGVGFETADAMLLYIFERNVFIADQYAIRLFSRLGFGEYKNYEAMHKEFNHLTKQIPY 178
Query: 189 KHQYNAHYWLVLHGRYV 205
H + LHG+
Sbjct: 179 DLCKEWHAAIDLHGKKY 195
>gi|122693890|emb|CAL89250.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693858|emb|CAL89234.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122693275|emb|CAL88942.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693243|emb|CAL88926.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKAHDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|317148991|ref|XP_003190266.1| HhH-GPD family base excision DNA repair protein [Aspergillus oryzae
RIB40]
Length = 457
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ Q +E L + PGIG K A +L P VDTHIFRI +G P
Sbjct: 312 NHLHTLNTEQVMEELIKYPGIGPKTAACVLLFCLQRPCFAVDTHIFRICKWLGWVPPDKA 371
Query: 176 NKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
++ L IP +Y+ H + HG+ C P+C
Sbjct: 372 TEITAFGHLEVRIPDHLKYSLHQLFIRHGKT-C----PRC 406
>gi|242255242|gb|ACS88605.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255220|gb|ACS88594.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ L P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFSLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693269|emb|CAL88939.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ L P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFSLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694155|emb|CAL89383.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKNLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693922|emb|CAL89266.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQTKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693924|emb|CAL89267.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255250|gb|ACS88609.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKNLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693482|emb|CAL89044.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693484|emb|CAL89045.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|228477369|ref|ZP_04062005.1| endonuclease III domain protein [Streptococcus salivarius SK126]
gi|228250804|gb|EEK09992.1| endonuclease III domain protein [Streptococcus salivarius SK126]
Length = 207
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 11/200 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ ++++E + + N +V+ +L ++T+ N A L ++
Sbjct: 1 MIKQEKIQETLLRLCEHYGE-QNWWQSDNKIEDLVSTILIQRTTEKNAKLALAGLMDVM- 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK------IPQTLEGLTR 132
T +++LA+ ++LQ IR G +++KS+ I L L + + + L
Sbjct: 59 TVEEILALPLEELQERIRPAGFFKQKSQTIRGLLIWLREVGGFEVLSKIGTEELRKQLLE 118
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---K 189
L GIG + A+ +L F P D + R+ R+G T N++ ++ K
Sbjct: 119 LKGIGPETADALLLYLFDRPVFISDEYARRLFRRLGFGNFDTYNEMHTVYGNVLEGLTLK 178
Query: 190 HQYNAHYWLVLHGRYVCKAR 209
H + HG+ K++
Sbjct: 179 QCQEIHAVIDEHGKAFGKSK 198
>gi|122693215|emb|CAL88912.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLSNAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|307108459|gb|EFN56699.1| hypothetical protein CHLNCDRAFT_11543 [Chlorella variabilis]
Length = 185
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ +V LLS +TD +A L E T + + + + IR G+ K+
Sbjct: 4 RSVLDSVVRTLLSQNTTDATSGRAFDTLKERFPTWEGVRTAPLAAVADAIRVGGLADIKA 63
Query: 106 ENIISLSHILINEFDNKIPQTLE---------GLTRLPGIGRKGANVILSMAFGIPTIGV 156
I ++ L E + L L+R G+G+K A +L A +P V
Sbjct: 64 GRIQAILSTLAAERGECSLEHLRGLPAAAAKAELSRFKGVGKKTAACVLLFALELPEFAV 123
Query: 157 DTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
DTH++ IS +G P T ++ + ++P + +Y+ H LV HG+ QC +
Sbjct: 124 DTHVWEISKALGWVPVNATRDQAYDHMNELVPDELKYDLHVLLVRHGK--------QCPA 175
Query: 216 C 216
C
Sbjct: 176 C 176
>gi|122693918|emb|CAL89264.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255222|gb|ACS88595.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693586|emb|CAL89096.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693327|emb|CAL88968.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693468|emb|CAL89037.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693476|emb|CAL89041.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694131|emb|CAL89371.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255208|gb|ACS88588.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693466|emb|CAL89036.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693864|emb|CAL89237.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693888|emb|CAL89249.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693938|emb|CAL89274.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255236|gb|ACS88602.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255248|gb|ACS88608.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693454|emb|CAL89030.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693305|emb|CAL88957.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693307|emb|CAL88958.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693331|emb|CAL88970.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693335|emb|CAL88972.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693337|emb|CAL88973.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694121|emb|CAL89366.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255232|gb|ACS88600.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693122|emb|CAL88865.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693112|emb|CAL88860.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693932|emb|CAL89271.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693116|emb|CAL88862.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805294|gb|ADE41777.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LDESFNHNQALIDLGALICSP 140
>gi|242255226|gb|ACS88597.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255228|gb|ACS88598.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ S I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSSEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|238494280|ref|XP_002378376.1| HhH-GPD family base excision DNA repair protein [Aspergillus flavus
NRRL3357]
gi|220695026|gb|EED51369.1| HhH-GPD family base excision DNA repair protein [Aspergillus flavus
NRRL3357]
Length = 468
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP 175
+ Q +E L + PGIG K A +L P VDTHIFRI +G P
Sbjct: 323 NHLHTLNTEQVMEELIKYPGIGPKTAACVLLFCLQRPCFAVDTHIFRICKWLGWVPPDKA 382
Query: 176 NKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
++ L IP +Y+ H + HG+ C P+C
Sbjct: 383 TEITAFGHLEVRIPDHLKYSLHQLFIRHGKT-C----PRC 417
>gi|122693175|emb|CAL88892.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|319757365|gb|ADV69307.1| hypothetical protein SSUJS14_0200 [Streptococcus suis JS14]
Length = 212
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 12/193 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L ++ ++ N +V+++L Q+T+ N +A + L T
Sbjct: 8 EQLTVLYQNLKRRYGEFH-WWNDENPIKDLVSMILIQQTTEANAKRALEQLEGRL-TIHS 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPG 135
+L + + LQ IR G +++KS I S+ + + L L G
Sbjct: 66 LLEMPVEDLQECIRPAGFFKQKSLYIRSVVEWANQFDGDFSRLDRVETAVLRKELLSLKG 125
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQY 192
+G + A+VIL D + R+ NR+GL+ + + Q I K
Sbjct: 126 VGNETADVILLYLCRRSVFVADQYALRLFNRLGLSQSQDYLSLRQEFTEQIKDWSVKDAQ 185
Query: 193 NAHYWLVLHGRYV 205
H + HG+
Sbjct: 186 ELHALIDEHGKQF 198
>gi|253751103|ref|YP_003024244.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis SC84]
gi|253753004|ref|YP_003026144.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis P1/7]
gi|253754827|ref|YP_003027967.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis BM407]
gi|251815392|emb|CAZ50965.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis SC84]
gi|251817291|emb|CAZ55021.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis BM407]
gi|251819249|emb|CAR44515.1| HhH-GPD superfamily base excision DNA repair protein [Streptococcus
suis P1/7]
Length = 206
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 12/193 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L ++ ++ N +V+++L Q+T+ N +A + L T
Sbjct: 2 EQLTVLYQNLKRRYGEFH-WWNDENPIKDLVSMILIQQTTEANAKRALEQLEGRL-TIHS 59
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPG 135
+L + + LQ IR G +++KS I S+ + + L L G
Sbjct: 60 LLEMPVEDLQECIRPAGFFKQKSLYIRSVVEWANQFDGDFSRLDRVETAVLRKELLSLKG 119
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQY 192
+G + A+VIL D + R+ NR+GL+ + + Q I K
Sbjct: 120 VGNETADVILLYLCRRSVFVADQYALRLFNRLGLSQSQDYLSLRQEFTEQIKDWSVKDAQ 179
Query: 193 NAHYWLVLHGRYV 205
H + HG+
Sbjct: 180 ELHALIDEHGKQF 192
>gi|122693948|emb|CAL89279.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122693020|emb|CAL88813.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|330834510|ref|YP_004409238.1| DNA-3-methyladenine glycosylase III [Metallosphaera cuprina Ar-4]
gi|329566649|gb|AEB94754.1| DNA-3-methyladenine glycosylase III [Metallosphaera cuprina Ar-4]
Length = 198
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 64/186 (34%), Gaps = 7/186 (3%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRK 103
+ + ++++ L + V + + +++ + ++ I+ + YR
Sbjct: 9 FDSADKIVISAFLVQLTKWETVKNVILSMERKGLSSLEEIAKLDISSVEKMIKPVNFYRT 68
Query: 104 KSENIISLSHILINE---FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHI 160
K+ I++ + + + + E L G+G + A+ IL A +
Sbjct: 69 KARRILNFARFAKDMGGLSNVLKLEKREVLLSQDGVGEETADSILLFAGHQLVFPNTDYS 128
Query: 161 FRISNRIGLAPGKTPNKVEQSLLRIIPPKHQ--YNAHYWLVLHGRYVCKARKPQCQSCII 218
R+ + +V + + H L G+ C KP+C C +
Sbjct: 129 RRVI-TRVIGRELKRREVASFVKQNFNEDLYVYKVLHAGLGAVGKTFCLLTKPKCDRCFL 187
Query: 219 SNLCKR 224
+C+
Sbjct: 188 KQVCEY 193
>gi|122693400|emb|CAL89005.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSTEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITLKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805314|gb|ADE41787.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805468|gb|ADE41864.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692720|emb|CAL88663.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692722|emb|CAL88664.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
H E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSHFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805318|gb|ADE41789.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHTKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693930|emb|CAL89270.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693281|emb|CAL88945.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467619|emb|CAB37761.1| MutY protein [Helicobacter pylori]
gi|18075315|emb|CAD11053.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692716|emb|CAL88661.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692826|emb|CAL88716.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693080|emb|CAL88844.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693233|emb|CAL88921.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693416|emb|CAL89013.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693478|emb|CAL89042.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693990|emb|CAL89300.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693994|emb|CAL89302.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255216|gb|ACS88592.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255218|gb|ACS88593.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805310|gb|ADE41785.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805438|gb|ADE41849.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452215|emb|CBL87690.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467621|emb|CAB37762.1| MutY protein [Helicobacter pylori]
gi|122692724|emb|CAL88665.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692766|emb|CAL88686.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692794|emb|CAL88700.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693068|emb|CAL88838.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693261|emb|CAL88935.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693868|emb|CAL89239.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694049|emb|CAL89330.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694055|emb|CAL89333.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694123|emb|CAL89367.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694135|emb|CAL89373.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805526|gb|ADE41893.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|327408294|emb|CCA30142.1| hypothetical protein NCLIV_070230 [Neospora caninum Liverpool]
Length = 480
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F+++VAV+LS+Q+ D + L + +P+KM + +L + + +G ++ K+
Sbjct: 336 FSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMNRLSVAELSDLLYGVGFHQNKARF 395
Query: 108 IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
+ L+ ++ IP T E L +L G+G K AN+ + I VD H+ RI+NR+
Sbjct: 396 LKEACATLLEKYGGDIPPTYEELVQLKGVGPKMANIAGW--GRVEGIAVDVHVHRITNRL 453
Query: 168 GLAPGKTPNKVEQSLLRII 186
K P + + +L + +
Sbjct: 454 NWVKTKNPIETQHALQKFL 472
>gi|122693500|emb|CAL89053.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693880|emb|CAL89245.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693498|emb|CAL89052.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693508|emb|CAL89057.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693902|emb|CAL89256.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694010|emb|CAL89310.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255214|gb|ACS88591.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692740|emb|CAL88673.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693179|emb|CAL88894.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693838|emb|CAL89224.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694117|emb|CAL89364.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255230|gb|ACS88599.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805400|gb|ADE41830.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|317452261|emb|CBL87713.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|67971738|dbj|BAE02211.1| unnamed protein product [Macaca fascicularis]
Length = 498
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 38/129 (29%), Gaps = 7/129 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L++A + +++ E + + + + ++ +G+Y +
Sbjct: 371 FHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLR 430
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ I+ S + + L GIG+ G +
Sbjct: 431 AKTIVKFSDEYLTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNK 483
Query: 165 NRIGLAPGK 173
L
Sbjct: 484 YHDWLWENH 492
>gi|292805510|gb|ADE41885.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL FG + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFGEKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G VC
Sbjct: 120 LNESFNHNQALIDLGALVCSP 140
>gi|122693074|emb|CAL88841.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693088|emb|CAL88848.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLNPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693042|emb|CAL88825.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 46.1 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSTCVDANIKRVLLRLFGLNPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|223932763|ref|ZP_03624761.1| HhH-GPD family protein [Streptococcus suis 89/1591]
gi|330832049|ref|YP_004400874.1| hypothetical protein SSUST3_0212 [Streptococcus suis ST3]
gi|223898596|gb|EEF64959.1| HhH-GPD family protein [Streptococcus suis 89/1591]
gi|329306272|gb|AEB80688.1| hypothetical protein SSUST3_0212 [Streptococcus suis ST3]
Length = 212
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 12/193 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L ++ ++ N +V+++L Q+T+ N +A + L T
Sbjct: 8 EQLTVLYQNLKRRYGEFH-WWNDENPIKDLVSMILIQQTTEANAKRALEQLEGRL-TIHS 65
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPG 135
+L + + LQ IR G +++KS I S+ + + L L G
Sbjct: 66 LLEMPVEDLQECIRPAGFFKQKSLYIRSVVEWANQFDGDFSRLDRVETAVLRKELLSLKG 125
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQY 192
+G + A+VIL D + R+ NR+GL+ + + Q I K
Sbjct: 126 VGNETADVILLYLCRRSIFVADQYALRLFNRLGLSQSQDYLSLRQEFTEQIKDWSVKDAQ 185
Query: 193 NAHYWLVLHGRYV 205
H + HG+
Sbjct: 186 ELHALIDEHGKQF 198
>gi|292805252|gb|ADE41756.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFKEKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693904|emb|CAL89257.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693163|emb|CAL88886.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFKEKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694141|emb|CAL89376.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692736|emb|CAL88671.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693221|emb|CAL88915.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693886|emb|CAL89248.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693056|emb|CAL88832.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692968|emb|CAL88787.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692792|emb|CAL88699.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694000|emb|CAL89305.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467633|emb|CAB37768.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNEYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|257783931|ref|YP_003179148.1| HhH-GPD family protein [Atopobium parvulum DSM 20469]
gi|257472438|gb|ACV50557.1| HhH-GPD family protein [Atopobium parvulum DSM 20469]
Length = 333
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Query: 25 LEEIFYLFSLKWPSPKGELYYV---NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
+E + + L + + + + ++ ++ Q+ V+ + E T
Sbjct: 45 VESVAKKGRELYRD----LPWRRTYDPYAIWISEVMLQQTQVSRVDGRWQRWLEHFPTVD 100
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
+ A + + +G R+ + I+E PQ + L +LPGIG A
Sbjct: 101 ALAAAAPSDVLEEWQGLGYNRRALSVHRAA--QAISEAGGVFPQDQKELVKLPGIGPATA 158
Query: 142 NVILSMAFGIPTIGVDTHIFRIS 164
I + AF + + ++T++ +
Sbjct: 159 AGIRAFAFNLHGVYLETNVRTVF 181
>gi|260781241|ref|XP_002585728.1| hypothetical protein BRAFLDRAFT_119982 [Branchiostoma floridae]
gi|229270764|gb|EEN41739.1| hypothetical protein BRAFLDRAFT_119982 [Branchiostoma floridae]
Length = 858
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVN---VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
E + + + L+VA + ++T + F +P+ K + ++ +
Sbjct: 726 EHLFHDPWKLLVATIFLNRTTVLQGEKAIPLMWEFFRRWPSPEVTRDADWKPICELLQPL 785
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
G+Y K+++ +I S + + L GIG+ G + + +
Sbjct: 786 GLYEKRAKTLIRFSDEFLTKDWAYPD-------ELYGIGKYGNDSYRIFCVNEWRQVMPS 838
Query: 159 HIFRISNRIGLAPGK 173
L
Sbjct: 839 DHKLNDYHNWLLENH 853
>gi|122693910|emb|CAL89260.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255234|gb|ACS88601.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693462|emb|CAL89034.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693472|emb|CAL89039.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693954|emb|CAL89282.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693492|emb|CAL89049.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|311064339|ref|YP_003971064.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium bifidum
PRL2010]
gi|310866658|gb|ADP36027.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium bifidum
PRL2010]
Length = 240
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 78/219 (35%), Gaps = 20/219 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
M S+ + P ++E ++ S + SP G F ++V +L+
Sbjct: 3 MASAHGNGRQSRRRPAAG-----DIESLYRALSAEL-SPTGWWPADTTFEIMVGAVLTQN 56
Query: 61 STDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF 119
+ NV+++ L + P + + ++LQ IR G Y KS+ + SLS +
Sbjct: 57 TAWGNVDRSLAALKAESMLDPHALTVVEPERLQELIRPSGFYVNKSKTLRSLSRWYVERC 116
Query: 120 D--------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP 171
D + L L GIG + A+ ++ F T DT+ R+ +G
Sbjct: 117 DASPEGADGITDAELRAELLGLFGIGGETADDMMLYVFSRRTFVADTYARRLFAFLGFDA 176
Query: 172 GKTPNKVEQSLLRI-----IPPKHQYNAHYWLVLHGRYV 205
++ + + H + G+
Sbjct: 177 PAGYPAFHKAYAPVVLDTGLDVADLQEFHGLIDEFGKAY 215
>gi|122693217|emb|CAL88913.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693928|emb|CAL89269.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694147|emb|CAL89379.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693968|emb|CAL89289.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLFWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P T ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692788|emb|CAL88697.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANARLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255198|gb|ACS88583.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKTFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255196|gb|ACS88582.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692738|emb|CAL88672.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693173|emb|CAL88891.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693241|emb|CAL88925.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693866|emb|CAL89238.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18390586|ref|NP_563752.1| endonuclease-related [Arabidopsis thaliana]
gi|15294154|gb|AAK95254.1|AF410268_1 At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|23505879|gb|AAN28799.1| At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|332189794|gb|AEE27915.1| endonuclease III [Arabidopsis thaliana]
Length = 314
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 15/191 (7%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY---------YVNH----F 49
S++ S S G P+ E++ PS + + ++ F
Sbjct: 122 STEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERRF 181
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEK-KLQNYIRTIGIYRKKSENI 108
+++ LLS+Q+ + A + L + + + ++ ++ I +G Y +K+ N+
Sbjct: 182 YVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNV 241
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSM-AFGIPTIGVDTHIFRISNRI 167
++ I + E+D IP+TLE L LPG+G K A+++L + + I VDTH+ RI NR+
Sbjct: 242 KKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRL 301
Query: 168 GLAPGKTPNKV 178
G +V
Sbjct: 302 GWVSKPGTKQV 312
>gi|122693860|emb|CAL89235.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692762|emb|CAL88684.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693512|emb|CAL89059.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693920|emb|CAL89265.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692726|emb|CAL88666.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692730|emb|CAL88668.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694143|emb|CAL89377.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692756|emb|CAL88681.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692744|emb|CAL88675.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255344|gb|ACS88656.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNNYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|255946089|ref|XP_002563812.1| Pc20g13320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588547|emb|CAP86661.1| Pc20g13320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 513
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L + + + + L + PGIG K A ++ P VDTHIF
Sbjct: 332 QYEIACADQNFLSLNHLHNLTTEEAMTDLIKYPGIGPKTAACVILFCLQRPCFAVDTHIF 391
Query: 162 RISNRIGLAPGKTPNKVEQSLLRI-IPPKHQYNAHYWLVLHGRYVCKARKPQC 213
R+ +G P ++ S L + IP +Y+ H + HG+ C P+C
Sbjct: 392 RLCRWLGWIPARSNEVTAFSHLEVRIPDHLKYSLHQLFIRHGKT-C----PRC 439
>gi|122692706|emb|CAL88656.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGIYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693014|emb|CAL88810.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692714|emb|CAL88660.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693704|emb|CAL89155.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693321|emb|CAL88965.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805446|gb|ADE41853.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGVYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694014|emb|CAL89312.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNENFNHNQALIDLGALICSP 140
>gi|18075337|emb|CAD11064.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122694083|emb|CAL89347.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGTYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693940|emb|CAL89275.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKTFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRKKRACVDANIKRTLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467609|emb|CAB37756.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|147840884|emb|CAN73183.1| hypothetical protein VITISV_028321 [Vitis vinifera]
Length = 746
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 5/40 (12%), Positives = 17/40 (42%)
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS 215
+ + + +++ P + + L+ G + P+C +
Sbjct: 220 KNIWRLIGKMVDPCRPGDFNQALMELGANIRIPLNPRCSA 259
>gi|122692764|emb|CAL88685.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692768|emb|CAL88687.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693156|emb|CAL88882.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693267|emb|CAL88938.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693273|emb|CAL88941.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693494|emb|CAL89050.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693496|emb|CAL89051.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693882|emb|CAL89246.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693900|emb|CAL89255.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693914|emb|CAL89262.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693942|emb|CAL89276.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255202|gb|ACS88585.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255204|gb|ACS88586.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|242255206|gb|ACS88587.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692750|emb|CAL88678.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692718|emb|CAL88662.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693386|emb|CAL88998.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|195954107|gb|ACG58759.1| MutY [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|93004312|gb|ABE97076.1| MutY [Helicobacter pylori]
gi|122694057|emb|CAL89334.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694137|emb|CAL89374.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693160|emb|CAL88884.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLSGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694113|emb|CAL89362.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPSITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693654|emb|CAL89130.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693030|emb|CAL88818.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEDVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805240|gb|ADE41750.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|259480217|tpe|CBF71146.1| TPA: hypothetical base excision DNA repair protein (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 502
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L + + L + PGIG K A +L P VDTHIF
Sbjct: 351 QYEIACADQNFLSLNYLHGLPTEEVMTELMKYPGIGPKTAACVLLFCLQRPCFAVDTHIF 410
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RI + P ++ L IP +Y H L+ HG+ C P+C
Sbjct: 411 RICKWLNWVPPDRATEITAFSHLEVRIPDHLKYPLHQLLIRHGKS-C----PRC 459
>gi|122694034|emb|CAL89322.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805336|gb|ADE41798.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693862|emb|CAL89236.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E+++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|67540934|ref|XP_664241.1| hypothetical protein AN6637.2 [Aspergillus nidulans FGSC A4]
gi|40738976|gb|EAA58166.1| hypothetical protein AN6637.2 [Aspergillus nidulans FGSC A4]
Length = 1085
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L + + L + PGIG K A +L P VDTHIF
Sbjct: 934 QYEIACADQNFLSLNYLHGLPTEEVMTELMKYPGIGPKTAACVLLFCLQRPCFAVDTHIF 993
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RI + P ++ L IP +Y H L+ HG+ C P+C
Sbjct: 994 RICKWLNWVPPDRATEITAFSHLEVRIPDHLKYPLHQLLIRHGKS-C----PRC 1042
>gi|255546672|ref|XP_002514395.1| conserved hypothetical protein [Ricinus communis]
gi|223546492|gb|EEF47991.1| conserved hypothetical protein [Ricinus communis]
Length = 608
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 18/168 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ K+S++Y+ +P + P + F L + + + ++V +L +T
Sbjct: 453 AEKRSEAYRRKTPDNT-WKPPRSD--FGLLQED--------HASDPWRVLVICMLLNCTT 501
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
V F + + ++++ I +G+ +K++ I LS
Sbjct: 502 GKQVRGVISDFFTLCPDAKAATEAKTEEIEKIIVPLGLQKKRAVMIQRLSQEY------- 554
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
+ +T+L G+G+ A+ G L
Sbjct: 555 LADDWTHVTQLHGVGKYAADAYAIFCTGKWDQVRPKDHMLNYYWDFLH 602
>gi|122692862|emb|CAL88734.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKRSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805364|gb|ADE41812.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEILLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693040|emb|CAL88823.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693048|emb|CAL88828.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693060|emb|CAL88834.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693082|emb|CAL88845.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693096|emb|CAL88852.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693098|emb|CAL88853.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKNLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|292805356|gb|ADE41808.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122693626|emb|CAL89116.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|242255254|gb|ACS88611.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICIKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693998|emb|CAL89304.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRERTACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693936|emb|CAL89273.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E+D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEYDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693058|emb|CAL88833.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693229|emb|CAL88919.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693460|emb|CAL89033.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICTKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692970|emb|CAL88788.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL FG + VD +I R+ GL T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFGEKSACVDANIKRVLLRLFGLDSNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692754|emb|CAL88680.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693235|emb|CAL88922.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693195|emb|CAL88902.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693870|emb|CAL89240.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|289616709|emb|CBI56659.1| unnamed protein product [Sordaria macrospora]
Length = 560
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 16/123 (13%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TP 175
+ + + L R PGIG K A + P GVDTH+ R +G P K P
Sbjct: 441 HMHTLTKDEAMTKLVRYPGIGIKSAACVTLFCLRKPCFGVDTHVHRFCRWLGWVPEKANP 500
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKAR----------KPQCQSCIISNLCK 223
+ +P +Y H + HG+ C+ + P+ C + +L
Sbjct: 501 EDCFRHCDVKVPDHLKYRLHQLFIRHGQQCFRCRKQTKPGTREWKESPR---CPLEHLLD 557
Query: 224 RIK 226
R K
Sbjct: 558 RGK 560
>gi|229816043|ref|ZP_04446364.1| hypothetical protein COLINT_03096 [Collinsella intestinalis DSM
13280]
gi|229808357|gb|EEP44138.1| hypothetical protein COLINT_03096 [Collinsella intestinalis DSM
13280]
Length = 307
Score = 45.3 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 54/149 (36%), Gaps = 5/149 (3%)
Query: 31 LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
P + + + + ++ ++ Q+ V + + + G +
Sbjct: 16 RLYRDLPWRRT----RDPYEIWLSEVMLQQTQVARVETRWVEWLDRFPSVFALAEAGTAE 71
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + +G R+ + + + ++D P ++ L LPGIG A I + AF
Sbjct: 72 VLAAWQGMGYNRRALAL-KAAAEQIAFDYDGVFPTEVKELVALPGIGPATAQGIRAFAFD 130
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVE 179
+P + ++T++ + + E
Sbjct: 131 LPGVYLETNVRTVVLHHLFPDVPSVPDKE 159
>gi|213692764|ref|YP_002323350.1| HhH-GPD family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524225|gb|ACJ52972.1| HhH-GPD family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320458923|dbj|BAJ69544.1| putative endonuclease III [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 235
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 15/198 (7%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P+ +E ++ + P G F ++V +L+ + NV+++ L
Sbjct: 18 PERIESLYRTMADALG-PTGWWPAETTFEIMVGAVLTQNTAWSNVDRSLAALKAEDVLEP 76
Query: 82 KMLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTR 132
LA + + LQ IR G Y KS+ + SLS + + L
Sbjct: 77 HALAAMDPERLQELIRPSGFYVNKSKTVQSLSRWYVERCGAAPEGAAAISDAELRAELLG 136
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI-----IP 187
L GIG + A+ ++ F T DT+ R+ +G ++ + +
Sbjct: 137 LFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPAGYPAFHKAYSPVVLSTSLS 196
Query: 188 PKHQYNAHYWLVLHGRYV 205
H + G+
Sbjct: 197 VGDLQEFHGLIDEFGKAY 214
>gi|18313126|ref|NP_559793.1| hypothetical protein PAE2138 [Pyrobaculum aerophilum str. IM2]
gi|18160636|gb|AAL63975.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 297
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +CK PQC C +CK K
Sbjct: 256 FGRKICKREAPQCTVCPFKEVCKAHK 281
>gi|282162886|ref|YP_003355271.1| putative endonuclease III [Methanocella paludicola SANAE]
gi|282155200|dbj|BAI60288.1| putative endonuclease III [Methanocella paludicola SANAE]
Length = 207
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 6/200 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKM 83
L++++ L + + F +V +L ++ NV++A L + TP+ +
Sbjct: 9 LKKLYELLDDGTGWEE-WWPADSDFERVVGSILIQRTRWENVDRAIAALNKEGLLTPRAL 67
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--DNKIPQTLEGLTRLPGIGRKGA 141
+ +L+ IR G YR+K+ + +++ + E L LPG+G + A
Sbjct: 68 ASCPSGRLEELIRPAGFYRQKAARLRAVAGYFSRSGAGSIPTEKLREELLSLPGVGNETA 127
Query: 142 NVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+VI+ G P +D + RI G+ + + H +V H
Sbjct: 128 DVIMLYVAGRPRFVLDAYAKRILKCAGIMDDHDELQALARKALCDDLEAHRRCHALIVEH 187
Query: 202 GRYVCKARKPQCQSCIISNL 221
G+ C K +C+ C++
Sbjct: 188 GKRYC--NKNECEMCLVKRY 205
>gi|122693036|emb|CAL88821.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467639|emb|CAB37771.1| MutY protein [Helicobacter pylori]
gi|122692974|emb|CAL88790.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693357|emb|CAL88983.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693594|emb|CAL89100.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693696|emb|CAL89151.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122694012|emb|CAL89311.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|292805342|gb|ADE41801.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805500|gb|ADE41880.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|292805530|gb|ADE41895.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694079|emb|CAL89345.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 NLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|4467637|emb|CAB37770.1| MutY protein [Helicobacter pylori]
gi|122694149|emb|CAL89380.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693120|emb|CAL88864.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRTLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122694024|emb|CAL89317.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + + + R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEDVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFR-ISNRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R + GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRALLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|146320053|ref|YP_001199764.1| hypothetical protein SSU98_0206 [Streptococcus suis 98HAH33]
gi|145690859|gb|ABP91364.1| Uncharacterized protein related to Endonuclease III [Streptococcus
suis 98HAH33]
gi|292557656|gb|ADE30657.1| Helix-hairpin-helix motif:HhH-GPD [Streptococcus suis GZ1]
Length = 227
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 12/193 (6%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
++L ++ ++ N +V+++L Q+T+ N +A + L T
Sbjct: 23 EQLTVLYQNLKRRYGEFH-WWNDENPIKDLVSMILIQQTTEANAKRALEQLEGRL-TIHS 80
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPG 135
+L + + LQ IR G +++KS I S+ + + L L G
Sbjct: 81 LLEMPVEDLQECIRPAGFFKQKSLYIRSVVEWANQFDGDFSRLDRVETAVLRKELLSLKG 140
Query: 136 IGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQY 192
+G + A+VIL D + R+ NR+GL+ + + Q I K
Sbjct: 141 VGNETADVILLYLCRRSVFVADQYALRLFNRLGLSQSQDYLSLRQEFTEQIKDWSVKDAQ 200
Query: 193 NAHYWLVLHGRYV 205
H + HG+
Sbjct: 201 ELHALIDEHGKQF 213
>gi|52353713|gb|AAU44279.1| unknow protein [Oryza sativa Japonica Group]
Length = 375
Score = 45.3 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 198 LVLHGRYVCKARKPQCQSCIISNLCKRI 225
++ G+ C KP C +C + + C+
Sbjct: 1 MITFGKVFCTKSKPNCNACPMRSECRHF 28
>gi|122693470|emb|CAL89038.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|18075319|emb|CAD11055.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|18075321|emb|CAD11056.1| A/G-specific adenine glycosylase [Helicobacter pylori]
gi|122692818|emb|CAL88712.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692824|emb|CAL88715.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122692830|emb|CAL88718.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + Y +++N+ + I E ++++P + L +LPGIG AN IL F
Sbjct: 21 EKVLLLWRGLGYYSRAKNLKKSAEICAKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGF 80
Query: 150 GIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
+ VD ++ R+ GL P ++ + +N + L+ G +C
Sbjct: 81 REKSACVDANVKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFNHNQALIDLGALICSP 140
>gi|322390807|ref|ZP_08064317.1| endonuclease III domain protein [Streptococcus parasanguinis ATCC
903]
gi|321142477|gb|EFX37945.1| endonuclease III domain protein [Streptococcus parasanguinis ATCC
903]
Length = 207
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 11/200 (5%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ +E++E + + N +V+ +L ++T+ N A L ++
Sbjct: 1 MIKQEEIQETLLRLCKHYGE-QNWWQSDNKIEDLVSTILIQRTTEKNAKLALAGLMDVM- 58
Query: 79 TPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKI------PQTLEGLTR 132
T + +LA+ ++LQ IR G +++KS+ I L L + + L
Sbjct: 59 TVEGILALPLEELQERIRPAGFFKQKSQTIRGLLTWLREVGGFEFLARIGTEDLRKLLLE 118
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---K 189
L GIG + A+ +L F P D + R+ R+G T N + ++ K
Sbjct: 119 LKGIGPETADALLLYLFDRPVFISDEYARRLFRRLGFGNFDTYNDMHAVYGNVLEGLTLK 178
Query: 190 HQYNAHYWLVLHGRYVCKAR 209
H + HG+ K++
Sbjct: 179 QCQEIHAVIDEHGKAFGKSK 198
>gi|122693313|emb|CAL88961.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAQDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|46191110|ref|ZP_00120548.2| COG2231: Uncharacterized protein related to Endonuclease III
[Bifidobacterium longum DJO10A]
gi|189439697|ref|YP_001954778.1| endonuclease III-like protein [Bifidobacterium longum DJO10A]
gi|239622252|ref|ZP_04665283.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|189428132|gb|ACD98280.1| Endonuclease III-like protein [Bifidobacterium longum DJO10A]
gi|239514249|gb|EEQ54116.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 219
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 15/204 (7%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +P +E ++ + P G F ++V +L+ + NVN++ L
Sbjct: 1 MPGVPSPAYIESLYRTMAAALG-PTGWWPAETTFEIMVGAVLTQNTAWGNVNRSLAALNA 59
Query: 76 I-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQT 126
P K+ +G LQ IR G Y KS+ + SLS + D +
Sbjct: 60 EGVLEPHKLAIMGPAHLQELIRPSGFYVNKSKTVQSLSRWYVERCGASPEGAADIPDAEL 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL---- 182
L L GIG + A+ ++ F T DT+ R+ +G ++
Sbjct: 120 RTELLGLFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPTGYLAFHKAYSPVV 179
Query: 183 -LRIIPPKHQYNAHYWLVLHGRYV 205
+ K H + G+
Sbjct: 180 LDASLSVKDLQEFHGLIDEFGKAY 203
>gi|70984374|ref|XP_747701.1| HhH-GPD family base excision DNA repair protein [Aspergillus
fumigatus Af293]
gi|66845328|gb|EAL85663.1| HhH-GPD family base excision DNA repair protein [Aspergillus
fumigatus Af293]
Length = 470
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L + + L + PGIG K A ++ P VDTHIF
Sbjct: 307 EYEIACADQNFLSLNHLHTLSTEDAMTELVKYPGIGPKTAACVILFCLQRPCFAVDTHIF 366
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RI +G P +V L IP +Y+ H L+ HG+ C P+C
Sbjct: 367 RICKWLGWVPPGKATEVTAFSHLEVRIPDYLKYSLHQLLIRHGKT-C----PRC 415
>gi|146304346|ref|YP_001191662.1| DNA-3-methyladenine glycosylase III [Metallosphaera sedula DSM
5348]
gi|145702596|gb|ABP95738.1| DNA-3-methyladenine glycosylase III [Metallosphaera sedula DSM
5348]
Length = 221
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 16/199 (8%)
Query: 37 PSPKGELY-YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE-KKLQNY 94
P + + ++++ L + +V + L E +A + L++Y
Sbjct: 25 PKSYEWWDGFDSADKIVISAFLVQLTKWESVKRVIGTLEEHGLAKVDSIAELDLPTLESY 84
Query: 95 IRTIGIYRKKSENIISLSHILINE---FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
R I YR K+ +++ + + + + L G+G + A+ IL A
Sbjct: 85 FRPINFYRTKARRVLNFAKFVKEMGGLNKVLLLERRPLLLTQEGVGEETADSILLFAGHQ 144
Query: 152 PTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLH------GRYV 205
P + R+ L ++ L + Q + + + +LH G+
Sbjct: 145 PVFPNTEYSRRV-----LGRVTGQEMKKRDLPNFVYHNVQQDLYLYKILHAGLGAVGKAF 199
Query: 206 CKARKPQCQSCIISNLCKR 224
C KP+C C + +C+
Sbjct: 200 CLLTKPKCDRCFLKQVCEY 218
>gi|93004320|gb|ABE97080.1| MutY [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLASAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692890|emb|CAL88748.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICCP 140
>gi|228473412|ref|ZP_04058166.1| endonuclease III domain protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275314|gb|EEK14112.1| endonuclease III domain protein [Capnocytophaga gingivalis ATCC
33624]
Length = 204
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
++F + + N T ++++L Q+T N KA +L + + + A+
Sbjct: 6 KVFNKLLAHYGK-QHWWNDPNRITDWISMILIQQTTQQNTEKALANLEGNI-SVEALHAM 63
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLPGIGRK 139
LQ YIR G Y++KS I +L ++ + + L + G+G +
Sbjct: 64 ELNTLQEYIRPAGFYKQKSTYIKALMEWYVSHGASLQKFEAIPTEELRKELLSIKGVGEE 123
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IPPKHQYNAHY 196
A+ +L F D + R+ NR+ L+ +T + + + + IP + H
Sbjct: 124 TADAMLLYIFERKVFIADQYAIRLLNRLNLSTAQTYKALREECMPLVAEIPLETCQEWHA 183
Query: 197 WLVLHGRYV 205
+ +HG+
Sbjct: 184 VIDVHGKAY 192
>gi|156055880|ref|XP_001593864.1| hypothetical protein SS1G_05292 [Sclerotinia sclerotiorum 1980]
gi|154703076|gb|EDO02815.1| hypothetical protein SS1G_05292 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 551
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ + T + +++ + P ++ L LPGIG K A + G
Sbjct: 335 IGKVLETKEQKEAEIKSLGENMLSIDYIHALDKPAAMDVLMDLPGIGVKTAACVALFCLG 394
Query: 151 IPTIGVDTHIFRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CK 207
P+ VDTH++R +G P G T ++ IP +Y+ H + HG+ C+
Sbjct: 395 RPSFAVDTHVWRHCKWLGWVPEGATRDQTFSHCEVRIPDHLKYSLHQLFLRHGKTCGRCR 454
Query: 208 ARKPQCQ------SCIISNL 221
A + C I +L
Sbjct: 455 AVTSEGSADWESTICPIEHL 474
>gi|122693285|emb|CAL88947.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANVKRVLLRLFGLDPNIQAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|289522675|ref|ZP_06439529.1| putative endonuclease III [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504511|gb|EFD25675.1| putative endonuclease III [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 162
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY--NAHYWL 198
+ + I D H+ R+ R+G + R + P+ + W
Sbjct: 71 EFKVPFADYYSIDISADVHVKRVFARLGFCNPDPTVEQVVYKARALYPQFPGIFDFSCW- 129
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKR 224
GR CK +KP C C + ++C
Sbjct: 130 -EIGRKWCKPKKPLCNECNMRDICPS 154
>gi|122694051|emb|CAL89331.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T +++ +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKELANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFRGKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693291|emb|CAL88950.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD ++ R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIQAKGLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122693760|emb|CAL89183.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E+++++P +
Sbjct: 1 FYSPFLEAFPTLKDLADAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEYNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|222444967|ref|ZP_03607482.1| hypothetical protein METSMIALI_00583 [Methanobrevibacter smithii
DSM 2375]
gi|222434532|gb|EEE41697.1| hypothetical protein METSMIALI_00583 [Methanobrevibacter smithii
DSM 2375]
Length = 236
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 43/233 (18%)
Query: 20 YTPKELEEIFYLFSLKWP----SPKGELYYVNH-----------------------FTLI 52
T + I+ + P N F +I
Sbjct: 1 MTENNINLIYDKLLKTYSYQGWWPIIGYDGSNPTKTGAVKGYHPKDYSFPRNSKEQFEII 60
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKML----AIGEKKLQNYIRTIGIYRKKSENI 108
+ +L+ ++ +V KA +L +++ + + + E + + IR G + +K +
Sbjct: 61 MGSVLTQNTSWPSVEKALNNLSLLSNFSAENILELADLCEDEFKQAIRPAGYFNQKFNYL 120
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+++ I+ + + + GIG + A+ IL A+ VD + RI + +G
Sbjct: 121 KNIAEFYISLDGEIPSRK--EVLAVKGIGNETADSILLFAYKQKQFKVDAYTKRIFSYLG 178
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYN------AHYWLVLHGRYVCKARKPQCQS 215
+ + ++ + H +V HG+ C +KP
Sbjct: 179 YFDE---KEKYMDIKKLFEDNFSGDVNAYQEYHALIVEHGKN-CYLKKPYGAE 227
>gi|122693167|emb|CAL88888.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|116493474|ref|YP_805209.1| DNA-3-methyladenine glycosylase III [Pediococcus pentosaceus ATCC
25745]
gi|116103624|gb|ABJ68767.1| DNA-3-methyladenine glycosylase III [Pediococcus pentosaceus ATCC
25745]
Length = 207
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 11/193 (5%)
Query: 24 ELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT-PQ 81
E+ I+ + K + + + ++ +L ++ VNV + +L + P
Sbjct: 2 EIPTIYKMMYQKMGKQPWLEEWQESPWEVVYGGILVQNTSWVNVAPSLMNLKNNFNFDPH 61
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP-------QTLEGLTRLP 134
++L + + LQ IR G Y +KS+ I ++ + + + L L
Sbjct: 62 RILRLSNEALQIQIRPSGFYTRKSQTIQNVLTWAQKYQFSIEKIGALPTLRLRKELLALV 121
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQY 192
GIG + A+ ++ AF D + RI +G + ++ + I +
Sbjct: 122 GIGPETADYLMMYAFDHAGFIADKYSQRIFEWMGHPLPSKYEQAKKEVEAAINLTDEEWK 181
Query: 193 NAHYWLVLHGRYV 205
N H +V G+ +
Sbjct: 182 NFHAMIVNSGKEI 194
>gi|122693502|emb|CAL89054.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122692904|emb|CAL88755.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICCP 140
>gi|121703826|ref|XP_001270177.1| helix-hairpin-helix motif protein [Aspergillus clavatus NRRL 1]
gi|119398321|gb|EAW08751.1| helix-hairpin-helix motif protein [Aspergillus clavatus NRRL 1]
Length = 465
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ L + + + L + PGIG K A +L P VDTHIF
Sbjct: 313 EYEIACADQNFLSLNHLHHLSTEEAMTELVKYPGIGPKTAACVLLFCLQRPCFAVDTHIF 372
Query: 162 RISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
RIS +G P +V L IP +Y+ H + HG+ C P+C
Sbjct: 373 RISKWLGWVPAGKATEVTAFSHLEVRIPDHLKYSLHQLFIRHGKT-C----PRC 421
>gi|328858824|gb|EGG07935.1| hypothetical protein MELLADRAFT_77474 [Melampsora larici-populina
98AG31]
Length = 371
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 27/201 (13%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK--MLAIGEKKLQNYIRTIGIYRK 103
N ++ +LS ++ N N+A + E + G K+L IR G+ +
Sbjct: 161 SNILEALIRTILSQNTSTSNSNRAYSKIIERYGNANFEDIRKSGIKELTETIRVGGLAER 220
Query: 104 KSENIISLSHILINEFD----------NKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
KS+ II++ + +I++ D Q ++ L G+G K + G T
Sbjct: 221 KSKVIITILNQIISKGDGILSLDKLRLMSDEQVMQELVEFDGVGIKTGACVSMFCLGRDT 280
Query: 154 IGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
VDTH+ R+S +G P K T ++ L +P +Y H L+ HG+
Sbjct: 281 FPVDTHVHRLSKSLGWVPPKATRDQTFFHLNLQLPNDLKYALHILLIRHGQ--------S 332
Query: 213 CQSC------IISNLCKRIKQ 227
C+ C I+ K K+
Sbjct: 333 CRQCSPTSKAPINPTNKSKKK 353
>gi|122694119|emb|CAL89365.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ L P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFSLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122692906|emb|CAL88756.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHHSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F T VD +I R+ GL P ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKTACVDANIKRVLLRLFGLDPNIQAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICCP 140
>gi|122693181|emb|CAL88895.1| A/G specific adenine glycosylase [Helicobacter pylori]
gi|122693191|emb|CAL88900.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692728|emb|CAL88667.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|122693916|emb|CAL89263.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E +++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHSSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|241631815|ref|XP_002410284.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503366|gb|EEC12860.1| conserved hypothetical protein [Ixodes scapularis]
Length = 686
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 7/121 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y + + L+VA + ++T + T + +L + + ++ +G++ K+
Sbjct: 551 YHDPWKLLVATIFLNRTTGKAAVPLIWKFLGLYPTAESVLQAPIQDIAELLQPLGLHNKR 610
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ I S + L GIG+ G + + +
Sbjct: 611 AAIIRRFSEEYLTRDWRYPS-------ELHGIGKYGNDSYRIFCVKEWAKRAALIHHQGT 663
Query: 165 N 165
Sbjct: 664 R 664
>gi|122692760|emb|CAL88683.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|4467615|emb|CAB37759.1| MutY protein [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +K+ R +G Y +++N+ + I + E+D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEYDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLNPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|122692742|emb|CAL88674.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|317481797|ref|ZP_07940825.1| HhH-GPD superfamily base excision DNA repair protein
[Bifidobacterium sp. 12_1_47BFAA]
gi|316916734|gb|EFV38128.1| HhH-GPD superfamily base excision DNA repair protein
[Bifidobacterium sp. 12_1_47BFAA]
Length = 219
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 15/204 (7%)
Query: 16 LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE 75
+ + +P +E ++ + P G F ++V +L+ + NVN++ L
Sbjct: 1 MPGVPSPAYIESLYRTMAAALG-PTGWWPAETTFEIMVGAVLTQNTAWGNVNRSLAALNA 59
Query: 76 I-ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF--------DNKIPQT 126
P K+ +G LQ IR G Y KS+ + SLS + D +
Sbjct: 60 EGVLEPHKLAIMGPAHLQELIRPSGFYVNKSKTVQSLSRWYVERCGASPEGAADIPDAEL 119
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI- 185
L L GIG + A+ ++ F T DT+ R+ +G ++ +
Sbjct: 120 RTELLGLFGIGGETADDLMLYVFSRRTFVADTYARRLFAFLGFDVPAGYLAFHKAYSPVV 179
Query: 186 ----IPPKHQYNAHYWLVLHGRYV 205
+ K H + G+
Sbjct: 180 LDTSLSVKDLQEFHGLIDEFGKAY 203
>gi|122693872|emb|CAL89241.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKNLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVC 206
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALIC 138
>gi|317035622|ref|XP_001396714.2| HhH-GPD family base excision DNA repair protein [Aspergillus niger
CBS 513.88]
Length = 472
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLR 184
+ L + PGIG K A +L P VDTHIFRI +G P ++ L
Sbjct: 341 MVELVKYPGIGPKTAACVLLFCLQRPCFAVDTHIFRICKWLGWVPSDKATEITAFSHLEV 400
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
IP +Y+ H L+ HG+ C P+C
Sbjct: 401 RIPDHLKYSLHQLLIRHGKS-C----PRC 424
>gi|134082233|emb|CAL00988.1| unnamed protein product [Aspergillus niger]
Length = 475
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLR 184
+ L + PGIG K A +L P VDTHIFRI +G P ++ L
Sbjct: 344 MVELVKYPGIGPKTAACVLLFCLQRPCFAVDTHIFRICKWLGWVPSDKATEITAFSHLEV 403
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
IP +Y+ H L+ HG+ C P+C
Sbjct: 404 RIPDHLKYSLHQLLIRHGKS-C----PRC 427
>gi|122692796|emb|CAL88701.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 90 KLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
+ + Y +++N+ + I + E ++++P + L +LPGIG AN IL F
Sbjct: 21 EKVLLLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQSLLKLPGIGAYTANAILCFGF 80
Query: 150 GIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
+ VD +I R+ GL P T ++ + +N + L+ G +C
Sbjct: 81 REKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLNLNESFNHNQALIDLGALICSP 140
>gi|148643535|ref|YP_001274048.1| endonuclease III-related protein [Methanobrevibacter smithii ATCC
35061]
gi|261350459|ref|ZP_05975876.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
gi|148552552|gb|ABQ87680.1| predicted endonuclease III-related protein [Methanobrevibacter
smithii ATCC 35061]
gi|288861242|gb|EFC93540.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
Length = 236
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 43/233 (18%)
Query: 20 YTPKELEEIFYLFSLKWP----SPKGELYYVNH-----------------------FTLI 52
T + I+ + P N F +I
Sbjct: 1 MTENNINLIYDKLLKTYSYQGWWPIIGYDGSNPTKTGAVKGYHPKDYSFPRNSKEQFEII 60
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKML----AIGEKKLQNYIRTIGIYRKKSENI 108
+ +L+ ++ +V KA +L + D + + E + + IR G + +K +
Sbjct: 61 MGSVLTQNTSWPSVEKALNNLSLLCDFSAENILELADSCEDEFKQAIRPAGYFNQKFNYL 120
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG 168
+++ I+ + + + GIG + A+ IL A+ VD + RI + +G
Sbjct: 121 KNIAEFYISLDGEIPSRK--EVLAVKGIGNETADSILLFAYKQKQFKVDAYTKRIFSYLG 178
Query: 169 LAPGKTPNKVEQSLLRIIPPKHQYN------AHYWLVLHGRYVCKARKPQCQS 215
+ + ++ + H +V HG+ C +KP
Sbjct: 179 YFDE---KEKYMDIKKLFEDNFSGDVNAYQEYHALIVEHGKN-CYLKKPYGAE 227
>gi|296084395|emb|CBI24783.3| unnamed protein product [Vitis vinifera]
Length = 189
Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRI 225
+ G +C P C +C +S+ C +
Sbjct: 1 MELGTTICTPLNPSCSACPVSDQCSAL 27
>gi|315223543|ref|ZP_07865398.1| endonuclease III domain protein [Capnocytophaga ochracea F0287]
gi|314946459|gb|EFS98453.1| endonuclease III domain protein [Capnocytophaga ochracea F0287]
Length = 216
Score = 44.1 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
++F + + N T ++++L Q+T N KA +L + + + A+
Sbjct: 18 KVFNKLLAHYGK-QYWWNDPNRITDWISMILIQQTTQQNTEKALANLEGNL-SVEALHAM 75
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLPGIGRK 139
LQ YIR G Y++KS I +L ++ + + L + G+G +
Sbjct: 76 ELNTLQEYIRPAGFYKQKSTYIKALMEWYVSHGASLQKFEAIPTEELRKELLSIKGVGEE 135
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IPPKHQYNAHY 196
A+ +L F D + R+ NR+ L+ +T + + + + IP + H
Sbjct: 136 TADAMLLYIFERKVFIADQYAIRLLNRLNLSSAQTYKALREECMPLVAEIPLETCQEWHA 195
Query: 197 WLVLHGRYV 205
+ +HG+
Sbjct: 196 VIDVHGKAY 204
>gi|213962001|ref|ZP_03390266.1| endonuclease III domain protein [Capnocytophaga sputigena Capno]
gi|213955354|gb|EEB66671.1| endonuclease III domain protein [Capnocytophaga sputigena Capno]
Length = 227
Score = 44.1 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQ 81
P+++ ++F + + N T ++++L Q+T N KA +L + +
Sbjct: 24 PQKI-KVFNKLLAHYGK-QYWWNDPNRITDWISMILIQQTTQENTEKALANLEGKL-SVE 80
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLP 134
+ A+ LQ YIR G Y++KS I +L ++ + + L +
Sbjct: 81 VLHAMELNTLQEYIRPAGFYKQKSTYIKALIEWYVSHGASLQKFQAIPTEELRKELLSIK 140
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IPPKHQ 191
G+G + A+ +L F D + R+ NR+ L+ +T + + + + IP +
Sbjct: 141 GVGEETADAMLLYIFERKVFIADQYAIRLLNRLNLSSAQTYKALREECMPLVAEIPLETC 200
Query: 192 YNAHYWLVLHGRYV 205
H + +HG+
Sbjct: 201 QEWHAVIDVHGKAY 214
>gi|308233468|ref|ZP_07664205.1| HhH-GPD family protein [Atopobium vaginae DSM 15829]
gi|328943414|ref|ZP_08240879.1| A/G-specific adenine glycosylase [Atopobium vaginae DSM 15829]
gi|327491383|gb|EGF23157.1| A/G-specific adenine glycosylase [Atopobium vaginae DSM 15829]
Length = 300
Score = 44.1 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + + ++ ++ Q+ V K + T + + N + +G R+
Sbjct: 38 TDPYKIWISEVMLQQTQTARVEKRFCAWIKKFPTVDVLALASVTDVLNEWQGMGYNRRAL 97
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ + +++E +P + + L LPGIG A I + A+ + ++T++ +
Sbjct: 98 ALLHAA--QMLSEQGGTMPSSQQDLQALPGIGPATAAGICAFAYNQHAVYLETNVRSVF 154
>gi|323507809|emb|CBQ67680.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 638
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 93/248 (37%), Gaps = 41/248 (16%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL---------------KWPSPKGELYYV 46
++S K+ P L TP E E + ++ K+ PKG+ +
Sbjct: 100 LASYKTSILGSPFPDHPLPTPTEAERVAWILGEFHGYKRESDGGRGLPKYTPPKGDDSWG 159
Query: 47 ------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI--GEKKLQNYIRTI 98
+ +V +LS +++ N A + + E E +L + IR
Sbjct: 160 GCGNVPSVLDAVVRTVLSCNTSNRNSAAAHRSMTEHFGRANWAAIHAAPESELVDAIRCG 219
Query: 99 GIYRKKSENIISLSHIL---------INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G+ K+ I + + D ++ L G+G K A+ +L+
Sbjct: 220 GLANNKARTIKGILAQTLEKHGKLSLDHLHDASDDDIMQQLVAFNGVGPKVASCVLAFCI 279
Query: 150 GIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKA 208
G ++ VDTH+FR+ +G P K ++ L +P +Y H L+ HG+
Sbjct: 280 GRDSMAVDTHVFRLCKALGWVPDKANRDQTYYHLHERVPGHLKYALHVLLIAHGK----- 334
Query: 209 RKPQCQSC 216
+C +C
Sbjct: 335 ---RCANC 339
>gi|317452251|emb|CBL87708.1| A/G-specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +K+ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEKVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANGFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|154302382|ref|XP_001551601.1| hypothetical protein BC1G_09975 [Botryotinia fuckeliana B05.10]
gi|150855463|gb|EDN30655.1| hypothetical protein BC1G_09975 [Botryotinia fuckeliana B05.10]
Length = 548
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
+++ L P + L LPGIG K A + G P+ VDTH++R
Sbjct: 350 KSLRENMLSLDYVHTLDKPAAMRVLMDLPGIGVKTAACVALFCLGRPSFAVDTHVWRHCM 409
Query: 166 RIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+G P K + ++ IP +Y+ H + HG+ C C
Sbjct: 410 WLGWVPEKASRDQTFSHCEVRIPDHLKYSLHQLFLRHGKT--------CGRC 453
>gi|310791057|gb|EFQ26586.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 517
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 19/147 (12%)
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
T G + + I + L + + LT+ P IG K A +L +P+
Sbjct: 302 EMTTGQKEHQLKKIEAGILTLDHIRAMPSDDVMMALTKYPHIGVKTAACLLLFCLQMPSF 361
Query: 155 GVDTHIFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
VDTH++R+ + PG V +P +Y H + HG C +C
Sbjct: 362 AVDTHVYRMCKWLYWVPGTENENYVYMHCDLRVPDHLKYGLHQLFIEHGSG-CH----RC 416
Query: 214 -------------QSCIISNLCKRIKQ 227
C + +L R +
Sbjct: 417 KGNTSKGTTEWDKAVCPLEHLLDRYGK 443
>gi|71003520|ref|XP_756426.1| hypothetical protein UM00279.1 [Ustilago maydis 521]
gi|46096031|gb|EAK81264.1| hypothetical protein UM00279.1 [Ustilago maydis 521]
Length = 1875
Score = 43.7 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSL---------------KWPSPKGELYYV 46
++S KS P L T +E + + ++ K+ +PKG+ +
Sbjct: 1335 LASYKSSILASPFPDHPLPTAEEADRVAWILGEFHGYKRESEGGQGLPKYTTPKGDDRWG 1394
Query: 47 ------NHFTLIVAVLLSAQSTDVNVNKATKHLFEIA--DTPQKMLAIGEKKLQNYIRTI 98
+ +V +LS ++ N A + L E + A E +L IR
Sbjct: 1395 GCGDVASVLDAVVRTVLSCNTSSRNSAAAHRSLTEHFGVRNWHAIHAAPESELVEAIRCG 1454
Query: 99 GIYRKKSENIISLSHIL---------INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G+ K+ I + + + D + ++ L G+G K A+ +L+
Sbjct: 1455 GLANNKARTIKGILNQTLQRHGKLSLDHLHDATDDEIMQELVSFNGVGPKVASCVLAFCI 1514
Query: 150 GIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--C 206
G ++ VDTH+FR+ + P K ++ L +P +Y H L+ HG+ C
Sbjct: 1515 GRQSMAVDTHVFRLCKALAWVPEKANRDQTYYHLHERVPGPLKYALHVLLIKHGKMCANC 1574
Query: 207 KAR 209
A+
Sbjct: 1575 SAK 1577
>gi|298345701|ref|YP_003718388.1| pyrimidine dimer deoxyribonuclease [Mobiluncus curtisii ATCC 43063]
gi|304390597|ref|ZP_07372550.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298235762|gb|ADI66894.1| deoxyribonuclease (pyrimidine dimer) [Mobiluncus curtisii ATCC
43063]
gi|304326353|gb|EFL93598.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 213
Score = 43.7 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKM 83
E+F + F ++V +L+ +T +V K+ ++L + P ++
Sbjct: 11 FRELFEILQRNVRDAGKWWPAETKFEILVGSVLTQNTTWTSVEKSLENLRKQGLLNPMRL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF----DNKIPQTLEGLTRLPGIGRK 139
+ +L+ IR G R K++ + +L+ I + P L R+PG+G +
Sbjct: 71 VGAKSSELETLIRPSGFMRAKAQYLKNLTEWYIKTDARAGEIDTPTLRNSLLRVPGVGEE 130
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
A+ IL A+ P DT+ R+ GL +T + +Q
Sbjct: 131 TADDILLYAYDRPVFIFDTYARRLLAAAGLGEFRTYRQAKQVCDA 175
>gi|295837250|ref|ZP_06824183.1| A/G-specific adenine glycosylase [Streptomyces sp. SPB74]
gi|295826424|gb|EFG64841.1| A/G-specific adenine glycosylase [Streptomyces sp. SPB74]
Length = 116
Score = 43.7 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLC 222
+ G VC A+ +C+ C + + C
Sbjct: 1 MELGALVCTAKGERCEPCPLRDRC 24
>gi|327309186|ref|XP_003239284.1| HhH-GPD family base excision DNA repair protein [Trichophyton
rubrum CBS 118892]
gi|326459540|gb|EGD84993.1| HhH-GPD family base excision DNA repair protein [Trichophyton
rubrum CBS 118892]
Length = 467
Score = 43.7 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+ L + + + + PGIG K A ++ P VD
Sbjct: 310 EEQKDNEIAMTNENVLSLNHLHSLSKDEAMLEFVKYPGIGVKTAACVVLFCLQRPCFAVD 369
Query: 158 THIFRISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
TH+FR+S +G P N++ L IP +Y+ H +LHG+ C P+C
Sbjct: 370 THVFRLSKWLGWIPTDKVNEITAFSHLEVKIPDHLKYSLHQLFILHGKA-C----PRC 422
>gi|159904698|ref|YP_001548360.1| HhH-GPD family protein [Methanococcus maripaludis C6]
gi|159886191|gb|ABX01128.1| HhH-GPD family protein [Methanococcus maripaludis C6]
Length = 232
Score = 43.7 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQN 93
++P K F + + +L+ ++ +V K+ K+L + + + + + + L+
Sbjct: 49 EYPKTK-----NQCFEICIGAILTQNTSWPSVEKSLKNLRNLIEITPENIINLDIELLKE 103
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
I+ G Y +KSE + S I + E L +L G+G + A+ +L AF +P+
Sbjct: 104 AIKPSGYYNQKSERLKGFSKYFIE---LTDTPSREELLKLKGVGPETADSMLLYAFKVPS 160
Query: 154 IGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYVCKARK 210
VD + R+ N + + +K+++ IP H LV H + + ++
Sbjct: 161 FVVDAYTKRMLFNLNLIENNEKYDKIKELFEENIPKNLEIYQEYHAILVEHAKNYYRKKE 220
Query: 211 PQCQSCIISNL 221
C C + +
Sbjct: 221 NYC-KCPLLKI 230
>gi|305663431|ref|YP_003859719.1| iron-sulfur cluster loop [Ignisphaera aggregans DSM 17230]
gi|304378000|gb|ADM27839.1| iron-sulfur cluster loop [Ignisphaera aggregans DSM 17230]
Length = 312
Score = 43.7 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR +C KP C C+ +C +
Sbjct: 271 FGRTICVRDKPMCTKCLFKEICPSYR 296
>gi|302890387|ref|XP_003044078.1| hypothetical protein NECHADRAFT_5986 [Nectria haematococca mpVI
77-13-4]
gi|256724997|gb|EEU38365.1| hypothetical protein NECHADRAFT_5986 [Nectria haematococca mpVI
77-13-4]
Length = 243
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 30/229 (13%)
Query: 9 SYQGNSPLGCLYTPKELEEIFYLFSLKW----------PSPKGELYYVNHFTLIVAVLLS 58
+ P TP+E + + P E Y +V LS
Sbjct: 3 TKSSPFPDFLRPTPRECKTAHDILEGLHGDAVREVFTAPDAPCE-DYPYAMDALVVAALS 61
Query: 59 AQSTDVNV---NKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
++ N ++ K ++ ++ G KL + +R G+ +K++ +++L +
Sbjct: 62 QATSWSNATRAMQSMKEIYGSPFAYSSIVKGGNDKLVDALRPGGMQNRKAKILMTLLKDV 121
Query: 116 INEFDNKIPQTLE----------GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISN 165
++ Q L +T+ GIG K A+ +LS+ VDTHI+R+S
Sbjct: 122 EAKYGKWDLQHLFTKTDDDEVIDEVTKFWGIGPKCAHCLLSICLKRDVFAVDTHIYRLSG 181
Query: 166 RIGLAPGKTPNKVEQSLL-RIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
G P K Q+ L IP + ++ HY ++ HG C P+C
Sbjct: 182 LWGWRPAKATKLTAQAHLDARIPNELKFPLHYLMISHGSS-C----PKC 225
>gi|270720559|ref|ZP_06223392.1| endonuclease III [Haemophilus influenzae HK1212]
gi|270315304|gb|EFA27613.1| endonuclease III [Haemophilus influenzae HK1212]
Length = 117
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 63/117 (53%), Positives = 86/117 (73%)
Query: 51 LIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIIS 110
L++AV+LSAQ+TD VNKAT+ LF +A+TPQ +L +G L++YI+TIG++ K+ENII
Sbjct: 1 LLIAVILSAQATDKGVNKATEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIK 60
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRI 167
LI + + +IP+ E L L G+GRK ANV+L+ AFG PTI VDTHIFR+ NR
Sbjct: 61 TCRDLIEKHNGEIPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRT 117
>gi|225619631|ref|YP_002720888.1| hypothetical protein BHWA1_00690 [Brachyspira hyodysenteriae WA1]
gi|225214450|gb|ACN83184.1| hypothetical protein BHWA1_00690 [Brachyspira hyodysenteriae WA1]
Length = 257
Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL-- 198
I + I D H+ R+ R+G + N++E +++ +
Sbjct: 163 QFKIKMNDYSSIDISADVHVIRVMYRLGFIEFERYNQLEDDKKKLLVIHKARELNPQFPG 222
Query: 199 -VLH-----GRYVCKARKPQCQSCIISNLCKR 224
+ GR C P C C ++ +C++
Sbjct: 223 KIDFVCWKLGRDYCHENNPDCDKCYMNKVCEK 254
>gi|256820465|ref|YP_003141744.1| HhH-GPD family protein [Capnocytophaga ochracea DSM 7271]
gi|256582048|gb|ACU93183.1| HhH-GPD family protein [Capnocytophaga ochracea DSM 7271]
Length = 204
Score = 43.4 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
++F + + N T ++++L Q+T N KA +L + + + A+
Sbjct: 6 KVFNKLLAHYGK-QYWWTDPNRITDWISMILIQQTTQQNTEKALANLEGNL-SVEALHAM 63
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINE-------FDNKIPQTLEGLTRLPGIGRK 139
LQ YIR G Y++KS I +L ++ + + L + G+G +
Sbjct: 64 ELNTLQEYIRPAGFYKQKSTYIKALMEWYVSHGASLQKFEAIPTEELRKELLSIKGVGEE 123
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRI---IPPKHQYNAHY 196
A+ +L F D + R+ NR+ L+ +T + + + + IP + H
Sbjct: 124 TADAMLLYIFERKVFIADQYAIRLLNRLNLSSAQTYKALREECMPLVAEIPLETCQEWHA 183
Query: 197 WLVLHGRYV 205
+ +HG+
Sbjct: 184 VIDVHGKAY 192
>gi|304321787|ref|YP_003855430.1| endonuclease III family protein [Parvularcula bermudensis HTCC2503]
gi|303300689|gb|ADM10288.1| endonuclease III family protein [Parvularcula bermudensis HTCC2503]
Length = 261
Score = 43.4 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 17/212 (8%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
+ + L + + + + ++ + L+ + + + +
Sbjct: 15 RMAEILVLTFGKARR--HTDDALRQLIFMTLAEGEARSVGLAVFEQMRRRYPNWRALSDA 72
Query: 87 GEKKLQNYIRTIGIYRKKSENIISL---------SHILINEFDNKIPQTLEGLTRLPGIG 137
L + R+K+E I L L L +LPG+
Sbjct: 73 SADDLTGLFVGLAHRRRKAEAIPGLLKAIEAESGGFDLSFLARVSTDAARRWLEKLPGVS 132
Query: 138 RKGANVILSMAF-GIPTIGVDTHIFRISNRIGLAPGKTP-----NKVEQSLLRIIPPKHQ 191
A+ +L+ + + VD R R+GL P +V + +
Sbjct: 133 HTMASAVLAFSSLNRAALPVDRASARPIRRLGLCAEGAPLSALGRQVLERAPASWDAEIV 192
Query: 192 YNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+ Y L C +P C+ C +S LC
Sbjct: 193 ADFSYGLSRLAAGYCGPARPDCEGCPLSTLCP 224
>gi|315657804|ref|ZP_07910684.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491601|gb|EFU81212.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 213
Score = 43.4 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKM 83
E+F + F ++V +L+ +T NV K+ ++L + P ++
Sbjct: 11 FRELFEILQRNVRDAGKWWPAETKFEILVGGVLTQNTTWTNVEKSLENLRKQGLLDPMRL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF----DNKIPQTLEGLTRLPGIGRK 139
+ +L+ IR G R K++ + +L+ I + P L R+PG+G +
Sbjct: 71 VGAKSSELETLIRPSGFMRAKAQYLKNLTEWYIKTDARASEIDTPTLRNSLLRVPGVGEE 130
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
A+ IL A+ P DT+ R+ GL +T + +Q
Sbjct: 131 TADDILLYAYDRPVFIFDTYARRLLVAAGLGEFRTYRQAKQVCDA 175
>gi|1171083|sp|P46230|MUTY_AERHY RecName: Full=A/G-specific adenine glycosylase
Length = 99
Score = 43.4 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 6/65 (9%), Positives = 21/65 (32%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ + V+ ++ Q+ V + Q + ++ ++ +G Y +
Sbjct: 31 KTPYRVWVSEIMLQQTQVATVIPYYQRFMARFPDVQALAQAPIDEVLHHWTGLGYYARAR 90
Query: 106 ENIIS 110
+
Sbjct: 91 NLHKA 95
>gi|122692752|emb|CAL88679.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 43.4 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E D+++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLRRGLGYYS-RAKNLKKSAEICVKEHDSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQALIDLGALICSP 140
>gi|134046056|ref|YP_001097542.1| DNA-3-methyladenine glycosylase III [Methanococcus maripaludis C5]
gi|132663681|gb|ABO35327.1| DNA-3-methyladenine glycosylase III [Methanococcus maripaludis C5]
Length = 232
Score = 43.4 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 34/218 (15%)
Query: 19 LYTPKELEEIFYLFSLKWP----SPKGELYYVNH-----------------------FTL 51
+ + L++I+ + P E N F +
Sbjct: 1 MEDKEILQKIYDYLFELYGPQGWWPLLEFDGCNPTKTGSVNGYHPNNYEYPKTKNQCFEI 60
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIIS 110
+ +L+ ++ +V K+ K+L + + + + + + L+ I+ G Y +KSE +
Sbjct: 61 CIGAILTQNTSWPSVEKSLKNLRNLIEIKPENIINLDIELLKEAIKPSGYYNQKSERLKG 120
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI-SNRIGL 169
S I + + L +L G+G + A+ +L AF +P+ +D + RI N +
Sbjct: 121 FSKYFIELKNTPTSE---ELLKLKGVGPETADSMLLYAFKVPSFVIDAYTKRILFNLNLI 177
Query: 170 APGKTPNKVEQSLLRIIPP--KHQYNAHYWLVLHGRYV 205
+ +K+++ IP + H LV H +
Sbjct: 178 KNNEKYDKIKELFEENIPKNLEMYQEYHALLVEHAKNY 215
>gi|315654292|ref|ZP_07907200.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii ATCC 51333]
gi|315491327|gb|EFU80944.1| HhH-GPD family DNA repair protein [Mobiluncus curtisii ATCC 51333]
Length = 213
Score = 43.4 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA-DTPQKM 83
E+F + F ++V +L+ +T NV K+ ++L + P ++
Sbjct: 11 FRELFEILQRNVRDAGKWWPAETKFEILVGGVLTQNTTWTNVEKSLENLRKQGLLDPMRL 70
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEF----DNKIPQTLEGLTRLPGIGRK 139
+ +L+ IR G R K++ + +L+ I + P L R+PG+G +
Sbjct: 71 VGAKSSELETLIRPSGFMRAKAQYLKNLTEWYIKTDARASEIDTPTLRNSLLRVPGVGEE 130
Query: 140 GANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLR 184
A+ IL A+ P DT+ R+ GL +T + +Q
Sbjct: 131 TADDILLYAYARPVFIFDTYARRLLVAAGLGEFRTYRQAKQVCDA 175
>gi|304385734|ref|ZP_07368078.1| deoxyribonuclease (pyrimidine dimer) [Pediococcus acidilactici DSM
20284]
gi|304328238|gb|EFL95460.1| deoxyribonuclease (pyrimidine dimer) [Pediococcus acidilactici DSM
20284]
Length = 209
Score = 43.4 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 70/187 (37%), Gaps = 12/187 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+++ I+ + + + ++ +L ++ NV + L + K
Sbjct: 9 QVKTIYQTMYARMGKQPWLEEWQETPWEVVYGGILVQNTSWRNVVPSLNSLKLNFNFNPK 68
Query: 83 ML-AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLP 134
++ + +++LQ +R G Y +K+ I ++ + + L L
Sbjct: 69 LILELSDEELQQNVRPSGFYTRKAAAIKNILQWAKGYDFSVLRIQNLTSSQLRAELLALH 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQY 192
G+G + A+ ++ AF D + R+ R+G K ++ + + + +
Sbjct: 129 GVGPETADYVMMYAFEHAGFIADKYSRRLFERMGCPLPKGYEAAKKMVEKELDLTSEQWK 188
Query: 193 NAHYWLV 199
N H ++
Sbjct: 189 NFH-AMI 194
>gi|29726680|pdb|1NGN|A Chain A, Mismatch Repair In Methylated Dna. Structure Of The
Mismatch-Specific Thymine Glycosylase Domain Of
Methyl-Cpg- Binding Protein Mbd4
Length = 155
Score = 43.4 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 7/132 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E+ + + + L++A + +++ E + + A + + ++ +G+Y
Sbjct: 25 EILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLY 84
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+++ II S + + L GIG+ G +
Sbjct: 85 DLRAKTIIKFSDEYLTKQWRYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHK 137
Query: 162 RISNRIGLAPGK 173
L
Sbjct: 138 LNKYHDWLWENH 149
>gi|115725067|ref|XP_783908.2| PREDICTED: similar to Methyl-CpG binding domain protein 4
[Strongylocentrotus purpuratus]
gi|115941841|ref|XP_001193972.1| PREDICTED: similar to Methyl-CpG binding domain protein 4
[Strongylocentrotus purpuratus]
Length = 550
Score = 43.0 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 7/129 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + +VA + ++ F+ DTP+K + + + + I+ +G++ K+
Sbjct: 424 FHDPWKHLVATIFLNRTKGSKAIPVLWQFFQTWDTPEKTRSADWQSIADLIQPLGLHTKR 483
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ +I S + + L GIG+ G +
Sbjct: 484 AKMLIQFSDEFLTKDWTYP-------IELSGIGKYGNDSYRIFCVNEWKEVKPQDHMLNK 536
Query: 165 NRIGLAPGK 173
L
Sbjct: 537 YHDWLWENH 545
>gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 660
Score = 43.0 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
L L G C+A++P C+ C +S C
Sbjct: 597 ALRLIGSSFCRAKEPLCEVCPLSKYC 622
>gi|302654297|ref|XP_003018956.1| hypothetical protein TRV_06967 [Trichophyton verrucosum HKI 0517]
gi|291182646|gb|EFE38311.1| hypothetical protein TRV_06967 [Trichophyton verrucosum HKI 0517]
Length = 473
Score = 43.0 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 98 IGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVD 157
+ L + + + + PGIG K A ++ P VD
Sbjct: 309 EEQKDNEIAMANENVLSLNHLHSLSKDEAMLEFVKYPGIGVKTAACVVLFCLQRPCFAVD 368
Query: 158 THIFRISNRIGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
THIFR+S +G P N++ L IP +Y+ H + HG+ C P+C
Sbjct: 369 THIFRLSKWLGWIPSDKVNEITAFSHLEVKIPDHLKYSLHQLFIRHGKA-C----PRC 421
>gi|242039843|ref|XP_002467316.1| hypothetical protein SORBIDRAFT_01g024773 [Sorghum bicolor]
gi|241921170|gb|EER94314.1| hypothetical protein SORBIDRAFT_01g024773 [Sorghum bicolor]
Length = 809
Score = 43.0 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 19/192 (9%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLF--SLKWPSPKGELY------YVNHFTLI 52
M++ +K + L ++ + + P P + + +I
Sbjct: 618 MMTMEKKPRRKSP----LLSAAEKRSDKYRRLPLDQLVPPPCSPHKLLQENYASDPWKVI 673
Query: 53 VAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLS 112
V +L + V K FE PQ KK+ Y+ +G R K++ I S
Sbjct: 674 VICMLLNLTQGKQVEKKVNGFFERYPDPQTAYRADPKKMAEYLAPLGFQRVKTKRIQKFS 733
Query: 113 HILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPG 172
+ + +T L G+G+ A+ G V + +
Sbjct: 734 KAY-------VGEEWTYITELCGVGKYAADAYAIFCAGRANEVVPKDHKLVDYWNYVCFE 786
Query: 173 KTPNKVEQSLLR 184
+ +++
Sbjct: 787 LPSIQKSKNVQE 798
>gi|302504713|ref|XP_003014315.1| hypothetical protein ARB_07622 [Arthroderma benhamiae CBS 112371]
gi|291177883|gb|EFE33675.1| hypothetical protein ARB_07622 [Arthroderma benhamiae CBS 112371]
Length = 475
Score = 43.0 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
L + + + + PGIG K A ++ P VDTH+FR+S
Sbjct: 318 MANENVLSLNHLHSLSKDEAMLEFVKYPGIGVKTAACVILFCLQRPCFAVDTHVFRLSKW 377
Query: 167 IGLAPGKTPNKVEQ--SLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
+G P N++ L IP +Y+ H + HG+ C P+C
Sbjct: 378 LGWIPPDKVNEITAFSHLEVKIPDHLKYSLHQLFIRHGKA-C----PRC 421
>gi|223995635|ref|XP_002287491.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976607|gb|EED94934.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 251
Score = 43.0 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK--LQNYIRTIGIYRKKSENII 109
I++ +LS +TD N KA +L + +A ++ IR G+ + ++ I
Sbjct: 59 IISTMLSQNTTDANQRKAFANLKKEFPGGWNDVANDVDTTRIETAIRVAGLAKIRAARIQ 118
Query: 110 SL----------SHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTH 159
+ ++ +F + + + L+R G+G K + +L A G P VDTH
Sbjct: 119 GMLKTVQQERNDANFEYLQFYDSDEEIQKELSRFKGMGPKTISCVLLFALGRPDFPVDTH 178
Query: 160 IFRISNRIGLAPGKTPNK-VEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKARK-----P 211
+ RI+ +IG + + L +P + + + H LV HG+ C A P
Sbjct: 179 VLRITKQIGWIGASHSRESAYEYLNERVPNECKMDLHCLLVTHGKQCYNCAANGKPQFPP 238
Query: 212 QCQS---CII 218
+ C +
Sbjct: 239 KGDEQWKCPL 248
>gi|67526617|ref|XP_661370.1| hypothetical protein AN3766.2 [Aspergillus nidulans FGSC A4]
gi|40740784|gb|EAA59974.1| hypothetical protein AN3766.2 [Aspergillus nidulans FGSC A4]
Length = 1673
Score = 43.0 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 35/106 (33%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +F+ T + M +L + I +G +++
Sbjct: 538 HDPFRLLLATIFLNRTRGGVALPILFQVFDRYPTIEAMAVANPHELVSMIHRLGFQNQRA 597
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
I+L+ ++ + + + GR
Sbjct: 598 RKCIALAQTWLSCPPFRGRRYRKLNYPRKTDGRDVKAGECIDDEDQ 643
>gi|326469311|gb|EGD93320.1| HhH-GPD family base excision DNA repair protein [Trichophyton
tonsurans CBS 112818]
gi|326483423|gb|EGE07433.1| HhH-GPD superfamily base excision DNA repair protein [Trichophyton
equinum CBS 127.97]
Length = 478
Score = 43.0 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIP 187
+ PGIG K A ++ P VDTH+FR+S +G P N++ L IP
Sbjct: 341 FVKYPGIGVKTAACVVLFCLQRPCFAVDTHVFRLSKWLGWIPPDKVNEITAFSHLEVKIP 400
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQC 213
+Y+ H + HG+ C P+C
Sbjct: 401 DHLKYSLHQLFIRHGKA-C----PRC 421
>gi|259481685|tpe|CBF75436.1| TPA: pre-mRNA splicing factor, putative (AFU_orthologue;
AFUA_7G04783) [Aspergillus nidulans FGSC A4]
Length = 758
Score = 42.6 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 35/106 (33%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +F+ T + M +L + I +G +++
Sbjct: 538 HDPFRLLLATIFLNRTRGGVALPILFQVFDRYPTIEAMAVANPHELVSMIHRLGFQNQRA 597
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
I+L+ ++ + + + GR
Sbjct: 598 RKCIALAQTWLSCPPFRGRRYRKLNYPRKTDGRDVKAGECIDDEDQ 643
>gi|242255238|gb|ACS88603.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 42.6 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
+ T + + +++ R +G Y +++N+ + I + E ++++P +
Sbjct: 1 FYSPFLKAFPTLKDLANAPLEEVLLLWRGLGYYS-RAKNLKKSAEICVKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKKACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ G +C
Sbjct: 120 LNESFNHNQTLIDLGALICSP 140
>gi|312213175|emb|CBX93257.1| hypothetical protein [Leptosphaeria maculans]
Length = 512
Score = 42.6 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-----------------G 172
LT+ PGIG K A+ +L P+ VDTH+FR+ +G P G
Sbjct: 339 LTKYPGIGPKTASCVLLFCLQRPSFAVDTHVFRLCRWLGWVPPPGDSRGLAPGAKGTFAG 398
Query: 173 KTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQS------------CIISN 220
T N +P +Y H L+ HG+ C P+C++ C I +
Sbjct: 399 PTRNSTYAHCEVRVPDDLKYPLHQLLIKHGKT-C----PRCRAITGEGSEGWEKGCPIEH 453
Query: 221 LCKR 224
L KR
Sbjct: 454 LVKR 457
>gi|20091106|ref|NP_617181.1| methylpurine DNA glycosylase [Methanosarcina acetivorans C2A]
gi|19916206|gb|AAM05661.1| methylpurine DNA glycosylase [Methanosarcina acetivorans C2A]
Length = 249
Score = 42.6 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Query: 36 WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNY 94
+ P E F +I LL+ + V KA +L ++ P+++L+ + L+
Sbjct: 63 YTYPHTE---NQQFEIICGALLTQNTNWQQVEKALINLRQMDSLYPERILSCDIETLKEA 119
Query: 95 IRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
I+ G Y +K+ + L+ N + L L GIG + A+ IL AF P+
Sbjct: 120 IKPAGYYNQKAARLKILAEWFTNFKSQTPERE--ELLSLKGIGPETADSILLYAFKQPSF 177
Query: 155 GVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYV 205
VD + R+ + +GL K ++++ +P H LV H +
Sbjct: 178 VVDAYTRRVVSNLGLVEEKAKYSEIKALFEENLPEDLVIYQEYHALLVEHAKRY 231
>gi|323310267|gb|EGA63457.1| Ntg1p [Saccharomyces cerevisiae FostersO]
Length = 314
Score = 42.6 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---------LQNYIRTIGI 100
+++ V+LS+Q+ D A ++ + L I ++G
Sbjct: 145 QVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGF 204
Query: 101 YRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT-IGVDTH 159
+ +K++ I+S IL ++F + +P T+ L LPG+G K A + L A+G I VD H
Sbjct: 205 HTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVH 264
Query: 160 IFRISNRIGLAP---GKTPNKVEQSLLRIIPPKHQYNAH 195
+ R++ KTP++ L +P +
Sbjct: 265 VDRLTKLWKWVDXQKCKTPDQTRTQLQNWLPKGLWTEIN 303
>gi|299745822|ref|XP_001841324.2| hypothetical protein CC1G_11852 [Coprinopsis cinerea okayama7#130]
gi|298406769|gb|EAU80497.2| hypothetical protein CC1G_11852 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 42.6 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 10 YQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKA 69
G PL Y ++ E +F P E + + L+VAV L ++T
Sbjct: 63 PPGEDPLALFY-HRKFERLFNDLEGLKPKLIQETVADDPWKLLVAVTLLNKTTGRAAIPV 121
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+ E TP + E+ L + +G R +++ + +S +
Sbjct: 122 FWKIMERWSTPFLLSQATEQDLVIMLTPLGTQRIRAQRLKEMSRLY 167
>gi|302419493|ref|XP_003007577.1| HhH-GPD family base excision DNA repair protein [Verticillium
albo-atrum VaMs.102]
gi|261353228|gb|EEY15656.1| HhH-GPD family base excision DNA repair protein [Verticillium
albo-atrum VaMs.102]
Length = 497
Score = 42.6 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPP 188
T+ PGIG K ++ ++ P+ VDTH++R + P K + + IP
Sbjct: 350 FTKYPGIGVKTSSCLILFCLQQPSFAVDTHVWRFCKWLKWVPPKASRDDTYMHGEVRIPD 409
Query: 189 KHQYNAHYWLVLHGRYVCKARKPQCQSC 216
+ +Y H + HG+ C C
Sbjct: 410 RLKYGLHQLFIRHGKE--------CGRC 429
>gi|222150576|ref|YP_002559729.1| hypothetical protein MCCL_0326 [Macrococcus caseolyticus JCSC5402]
gi|222119698|dbj|BAH17033.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 210
Score = 42.6 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 25 LEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT-PQKM 83
++E++ P+G ++F +I+ +L + NV + +L + P+++
Sbjct: 5 VQELYDCLYDNLG-PQGWWPAEDNFEIIIGAILVQNTNWRNVEHSLSNLRKATQFDPERI 63
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL-------TRLPGI 136
L + +LQ+ IR G Y+ KS II++ L + + +L GI
Sbjct: 64 LNLHLSELQSLIRPSGFYKNKSAAIIAVFTWLKSHEYDFKAIDKLYTTELRSELLKLRGI 123
Query: 137 GRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLL-RIIPPKHQYNAH 195
G + A+V+L F DT+ R+ N +G+ + + L P H H
Sbjct: 124 GFETADVLLVYVFERVVFIADTYTRRLFNALGVQSKSYMDLYNKVTLPDTFTPLHAQEFH 183
Query: 196 YWLVLHGRYVCKAR 209
L G+ A+
Sbjct: 184 GLLDEFGKRYLTAK 197
>gi|300702383|ref|YP_003743983.1| hhh-gpd family protein [Ralstonia solanacearum CFBP2957]
gi|299070044|emb|CBJ41329.1| putative HhH-GPD family protein [Ralstonia solanacearum CFBP2957]
Length = 87
Score = 42.2 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 195 HYWLVLHGRYVCKARKPQCQSCIISNLCKRIK 226
++ ++ CK R+P C SC + C +
Sbjct: 37 NWAILDVAATYCKPRQPACPSCPLKRSCAHAR 68
>gi|221112536|ref|XP_002166902.1| PREDICTED: similar to 5-methylcytosine G/T mismatch-specific DNA
glycosylase [Hydra magnipapillata]
Length = 180
Score = 42.2 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y+ + L++A + +++ TP + +++ ++ +G+ ++
Sbjct: 54 YMKPWQLLIATIFLNKTSATVALPLFWQFVSRFPTPNDVNENNFEEISALMKPLGLNYRR 113
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
++NII S +++ L GIG+ G + G
Sbjct: 114 AKNIIQFSFEFLHKDWKYPR-------ELYGIGKYGDDSYRMFCLGQFDNV 157
>gi|296420260|ref|XP_002839693.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635887|emb|CAZ83884.1| unnamed protein product [Tuber melanosporum]
Length = 441
Score = 42.2 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
+ + LT G+G K A+ ++ + VDTH+FR+S + P K
Sbjct: 253 YIHKLSDDEARQKLTSFDGVGPKTASCVMLFCLRRDSFAVDTHVFRLSKFLKWVPAKATR 312
Query: 177 KVEQSLLRI-IPPKHQYNAHYWLVLHGRYV--CKA 208
+ + L + +P +H+Y H L+ HGR CKA
Sbjct: 313 ETTYAHLDVRVPAEHKYALHNLLIRHGRTCKECKA 347
>gi|116629638|ref|YP_814810.1| endonuclease III-like protein [Lactobacillus gasseri ATCC 33323]
gi|238854277|ref|ZP_04644621.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
gasseri 202-4]
gi|282851157|ref|ZP_06260524.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
gasseri 224-1]
gi|311110719|ref|ZP_07712116.1| putative endonuclease III [Lactobacillus gasseri MV-22]
gi|116095220|gb|ABJ60372.1| DNA-3-methyladenine glycosylase III [Lactobacillus gasseri ATCC
33323]
gi|238833088|gb|EEQ25381.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
gasseri 202-4]
gi|282557689|gb|EFB63284.1| base excision DNA repair protein, HhH-GPD family [Lactobacillus
gasseri 224-1]
gi|311065873|gb|EFQ46213.1| putative endonuclease III [Lactobacillus gasseri MV-22]
Length = 216
Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 12/193 (6%)
Query: 20 YTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADT 79
L E++ L P G + + +I + +L + NV+KA L++ +
Sbjct: 1 MKKINLNELYDLMYEHL-DPNGWWPGRSDWHVIWSTILIQNTNWKNVDKALATLYQATNF 59
Query: 80 PQKML-AIGEKKLQNYIRTIGIYRKKSE-------NIISLSHILINEFDNKIPQTLEGLT 131
+ + + + KL+ I + G + +K+ L Q L
Sbjct: 60 WPENILNLSDNKLEKAIASAGFFTRKAATLKRLATYFQKYEFDLDRCRQLSKEQLRPELL 119
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP--- 188
+ GIG + A+VIL VDT+ R+ + + + K ++ + +
Sbjct: 120 SIKGIGPETADVILMYGIQKGEFVVDTYARRLFDCLACPLPSSYQKAKELVEANVDHFTL 179
Query: 189 KHQYNAHYWLVLH 201
++ N H +V+
Sbjct: 180 RNYQNFHAMIVMF 192
>gi|221104829|ref|XP_002167512.1| PREDICTED: similar to 5-methylcytosine G/T mismatch-specific DNA
glycosylase [Hydra magnipapillata]
Length = 160
Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
Y+ + L++A + +++ TP + +++ ++ +G+ ++
Sbjct: 34 YMKPWQLLIATIFLNKTSATVALPLFWQFVSRFPTPNDVNENNFEEISALMKPLGLNYRR 93
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
++NII S +++ L GIG+ G + G
Sbjct: 94 AKNIIQFSFEFLHKDWKYPR-------ELYGIGKYGDDSYRMFCLGQFDNV 137
>gi|256599915|pdb|3IHO|A Chain A, The C-Terminal Glycosylase Domain Of Human Mbd4
Length = 138
Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 38/129 (29%), Gaps = 7/129 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L++A + +++ E + + + + ++ +G+Y +
Sbjct: 17 FHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLR 76
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ I+ S + + L GIG+ G +
Sbjct: 77 AKTIVKFSDEYLTKQWKYP-------IELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNK 129
Query: 165 NRIGLAPGK 173
L
Sbjct: 130 YHDWLWENH 138
>gi|242039839|ref|XP_002467314.1| hypothetical protein SORBIDRAFT_01g024706 [Sorghum bicolor]
gi|241921168|gb|EER94312.1| hypothetical protein SORBIDRAFT_01g024706 [Sorghum bicolor]
Length = 346
Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 15/184 (8%)
Query: 1 MVSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELY------YVNHFTLIVA 54
M++ +K + + + P P + + +IV
Sbjct: 133 MMTMEKKPRRKSPLLSAAEKRSDKYRRL--PLDQLVPPPCSPHKLLQENYASDPWKVIVI 190
Query: 55 VLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHI 114
+L + V K FE PQ KK+ Y+ +G R K++ I S
Sbjct: 191 CMLLNLTQGKQVEKKVNGFFERYPDPQTAYRADPKKMAEYLAPLGFQRVKTKRIQKFSKA 250
Query: 115 LINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKT 174
+ + +T L G+G+ A+ G V + +
Sbjct: 251 Y-------VGEEWTYITELCGVGKYAADAYAIFCAGRANEVVPKDHKLVDYWNYVCFELP 303
Query: 175 PNKV 178
+V
Sbjct: 304 SIQV 307
>gi|134081019|emb|CAK41531.1| unnamed protein product [Aspergillus niger]
Length = 918
Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 36/95 (37%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +F+ T + M + L + I +G +++
Sbjct: 690 HDPFRLLIATIFLNRTRGGVALPVLFKVFDRFPTVEAMASTDTNTLASMIHCLGFQNQRA 749
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ I+L+ + K + + G GR
Sbjct: 750 KKCITLAQTWLAFPPTKGKRYRKLHYPCKGDGRDI 784
>gi|302410315|ref|XP_003002991.1| base excision DNA repair protein [Verticillium albo-atrum VaMs.102]
gi|261358015|gb|EEY20443.1| base excision DNA repair protein [Verticillium albo-atrum VaMs.102]
Length = 327
Score = 41.8 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 76/215 (35%), Gaps = 17/215 (7%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
++K S G SP + F FS K P P + + +A + +
Sbjct: 88 AAKPKVSPSGASPNALQAKKLKA---FDQFSAKSPFP--DFAHPTAEEAKLAHRILTLAA 142
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
T A T + AI L + + + ++ L + FD
Sbjct: 143 RRRARGPT---RSEAPTLRAPEAIKCGGLAAVKSKVILGILEQAKARYGAYSLDHMFDKT 199
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQS 181
+ + L G+G K A+ +L + VDTH++RI+ +G + ++
Sbjct: 200 DEEAMRELIGFQGVGPKTASCVLLFCLRRESFAVDTHVWRITGLLGWRPKTASRDETYAH 259
Query: 182 LLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSC 216
L IP + +Y H LV HG+ C C
Sbjct: 260 LDVRIPDEDKYGLHILLVKHGKV--------CDEC 286
>gi|222824037|ref|YP_002575611.1| HhH-GPD family protein [Campylobacter lari RM2100]
gi|222539259|gb|ACM64360.1| HhH-GPD family protein [Campylobacter lari RM2100]
Length = 226
Score = 41.8 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 11/181 (6%)
Query: 27 EIFYLFSLKWPSPKG--ELYYVN--HFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQ 81
EIF K L F ++++V+L+ + NV KA +L + +
Sbjct: 5 EIFKALVNANTDYKDFEWLENNTLSEFEILISVVLTQNTNWKNVLKALINLKQANITKIE 64
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQ----TLEGLTRLPGIG 137
+L + + L I+ G Y K++ I + + +F++ E L + G+G
Sbjct: 65 DLLNLNTQDLALLIKPSGFYNTKAKYIKNFTQKYFQDFNSFEFFKEEVDREWLLGVKGLG 124
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYW 197
++ A+ IL+ + VD++ +I+N +G E I K+Q +
Sbjct: 125 QESADGILNYICKKEVLVVDSYSAKIANYLGYECQSYDELAEFFKKDI--AKNQNELNVL 182
Query: 198 L 198
L
Sbjct: 183 L 183
>gi|297829352|ref|XP_002882558.1| hypothetical protein ARALYDRAFT_896965 [Arabidopsis lyrata subsp.
lyrata]
gi|297328398|gb|EFH58817.1| hypothetical protein ARALYDRAFT_896965 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 41.8 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 62/174 (35%), Gaps = 15/174 (8%)
Query: 4 SKKSDSYQGNSPLGCLYTPKELEEIFYLF--SLKW--PSPKGEL----YYVNHFTLIVAV 55
K + + L ++ +E + W P L ++ + + ++V
Sbjct: 263 EKSTRVRKTPVVSPSLSLSQKTDEAYQRKTPDKTWVPPRSPCNLLQEHHWHDPWRVLVIC 322
Query: 56 LLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
+L +++ + LF + + + E+++++ I+ +G+ +K++ I S
Sbjct: 323 MLLNKTSGAQTRGVIEDLFALCPDAKTATEVEEREIESLIKPLGLQKKRARMIQRFSLEY 382
Query: 116 INEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGL 169
+ ++ +T+L GIG+ A+ G L
Sbjct: 383 -------LQESWTHVTQLHGIGKYAADAYAIFCNGNWDRVKPDDHMLNYYWEFL 429
>gi|270290011|ref|ZP_06196237.1| DNA-3-methyladenine glycosylase III [Pediococcus acidilactici 7_4]
gi|270281548|gb|EFA27380.1| DNA-3-methyladenine glycosylase III [Pediococcus acidilactici 7_4]
Length = 209
Score = 41.8 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 70/187 (37%), Gaps = 12/187 (6%)
Query: 24 ELEEIFYLFSLKWPSPKGELYY-VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+++ I+ + + + ++ +L ++ NV + +L + K
Sbjct: 9 QVKTIYQTMYARMGKQPWLEEWQETPWEVVYGGILVQNTSWRNVVPSLNNLKLNFNFNPK 68
Query: 83 ML-AIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLP 134
++ + +++LQ +R G Y +K+ I ++ + L L
Sbjct: 69 LILELSDEELQQNVRPSGFYTRKAAAIKNILQWAKGYDFSVSRIQNLTSSQLRAELLALH 128
Query: 135 GIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIP--PKHQY 192
GIG + A+ ++ AF D + R+ R+G K ++ + + + +
Sbjct: 129 GIGPETADYVMMYAFEHAGFIADKYSRRLFERMGCPLPKGYEATKKMVEKELDLTSEQWK 188
Query: 193 NAHYWLV 199
N H ++
Sbjct: 189 NFH-AMI 194
>gi|47223872|emb|CAG06049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 293
Score = 41.8 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 60/103 (58%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F ++V+++LS+Q+ D + A + L T + +LA E+ L I +G +R K+ +
Sbjct: 69 FQVLVSLMLSSQTKDQVTSAAMRKLRAHGCTVENILATNEETLGRLIYPVGFWRNKARYL 128
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
S +L EF IP ++EGL RLPG+G K A++ + +A+G
Sbjct: 129 KLTSAMLQTEFGGDIPDSVEGLVRLPGVGPKMAHLAMDIAWGQ 171
>gi|147769944|emb|CAN72280.1| hypothetical protein VITISV_000904 [Vitis vinifera]
Length = 676
Score = 41.8 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 5/39 (12%), Positives = 16/39 (41%)
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQ 214
+ + + +++ P + + L+ G + P+C
Sbjct: 94 KNIXRLIGKMVDPCRPGDFNQALMELGXNIRIPLNPRCS 132
>gi|296416797|ref|XP_002838059.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633958|emb|CAZ82250.1| unnamed protein product [Tuber melanosporum]
Length = 293
Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 11/166 (6%)
Query: 33 SLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
+ ++ + EL + N F LIV+ + ++ E TP+K+ +L
Sbjct: 89 AERFGIVQEELAH-NPFQLIVSTIFLNRTRGSVAKPFLWRCLETWPTPEKLSEASLPELT 147
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGI---------GRKGANV 143
++ +G++ ++ +ISL+ I T++ G K
Sbjct: 148 ALLQPLGLHNIRAARLISLAKTWITRPPIPFHGTVKYNYPARDTIPFPLPEYDGPKWGVE 207
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
GV + + + R++P
Sbjct: 208 QNYRWEIGHLPGVGAYALDSWRIFCC-DEFRGIEDKDEWRRVVPKD 252
>gi|296814514|ref|XP_002847594.1| helix-hairpin-helix domain-containing protein [Arthroderma otae CBS
113480]
gi|238840619|gb|EEQ30281.1| helix-hairpin-helix domain-containing protein [Arthroderma otae CBS
113480]
Length = 481
Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIP 187
+ PGIG K A ++ P VDTH+FR+S +G P + N++ L +P
Sbjct: 340 FVKYPGIGVKTAACVILFCLQRPCFAVDTHVFRLSKWLGWVPPEKANEITAFSHLEVRVP 399
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQC 213
+Y+ H + HG+ C P+C
Sbjct: 400 DNLKYSLHQLFIRHGKA-C----PRC 420
>gi|260101529|ref|ZP_05751766.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084672|gb|EEW68792.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|328466413|gb|EGF37562.1| hypothetical protein AAULH_06821 [Lactobacillus helveticus MTCC
5463]
Length = 217
Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 73/180 (40%), Gaps = 12/180 (6%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AIGEKKLQNYIR 96
P G + + +I + +L + NV+KA K L++ + + + +++LQ I
Sbjct: 18 DPNGWWPGRSDWEVIWSTVLIQNTNWKNVDKALKILYKATNFLPANILKMSDEELQQTIA 77
Query: 97 TIGIYRKKSENIISLSHILINEFDN--------KIPQTLEGLTRLPGIGRKGANVILSMA 148
+ G Y +K++ + +++ + F+ + + + + GIG + A+VIL
Sbjct: 78 SAGSYTRKAQTLKNIAQYFKDNFNYDLEVAQEQNKKKLRKEILTIKGIGPETADVILMYG 137
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH--YWLVL-HGRYV 205
VD + R+ +G K ++ + + N + ++ G+
Sbjct: 138 LRKGEFVVDQYSRRLFTCLGWQDIPPYEKAKKIIEENLTDFTLRNYQNFHAMIDMFGQKY 197
>gi|291456341|ref|ZP_06595731.1| base excision DNA repair protein, HhH-GPD family [Bifidobacterium
breve DSM 20213]
gi|291381618|gb|EFE89136.1| base excision DNA repair protein, HhH-GPD family [Bifidobacterium
breve DSM 20213]
Length = 203
Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 14/181 (7%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEI-ADTPQKMLAIGEKKLQNYIRT 97
P G F ++V +L+ + NVN++ L P K+ +G LQ IR
Sbjct: 7 PTGWWPAETTFEIMVGAVLTQNTAWGNVNRSLAALNAEGVLEPHKLAIMGPAHLQELIRP 66
Query: 98 IGIYRKKSENIISLSHILINEF--------DNKIPQTLEGLTRLPGIGRKGANVILSMAF 149
G Y KS+ + SLS + D + L L GIG + A+ ++ F
Sbjct: 67 SGFYVNKSKTVQSLSRWYVERCGASPEGAADIPDAELRTELLGLFGIGGETADDLMLYVF 126
Query: 150 GIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LRIIPPKHQYNAHYWLVLHGRY 204
T DT+ R+ +G ++ + K H + G+
Sbjct: 127 SRRTFVADTYARRLFAFLGFDVPAGYPAFHRAYSPVVLDTNLSVKDLQEFHGLIDEFGKA 186
Query: 205 V 205
Sbjct: 187 Y 187
>gi|330934949|ref|XP_003304766.1| hypothetical protein PTT_17442 [Pyrenophora teres f. teres 0-1]
gi|311318473|gb|EFQ87134.1| hypothetical protein PTT_17442 [Pyrenophora teres f. teres 0-1]
Length = 527
Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 51/149 (34%), Gaps = 34/149 (22%)
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ E L + LT+ PGIG K A+ +L P+ VDTH+F
Sbjct: 314 HAEVEKAEQNIVSLDHLHLLSNDDAFNALTKYPGIGPKTASCVLLFCLQRPSFAVDTHVF 373
Query: 162 RISNRIGLAP-----------------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
R+ +G P G T N +P +Y H L+ HG+
Sbjct: 374 RLCKWLGWVPPPGDPAGLAPGAKGTFTGPTRNSTYAHCEVRVPDHLKYPLHQLLIRHGKT 433
Query: 205 VCKARKPQC------------QSCIISNL 221
C P+C + C I +L
Sbjct: 434 -C----PRCRAITGESSEGWDEGCPIDHL 457
>gi|189200344|ref|XP_001936509.1| base excision DNA repair protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983608|gb|EDU49096.1| base excision DNA repair protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 522
Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 34/128 (26%)
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP----------- 171
LT+ PGIG K A+ +L P+ VDTH+FR+ +G P
Sbjct: 330 NDDAFNALTKYPGIGPKTASCVLLFCLQRPSFAVDTHVFRLCKWLGWVPPPGDPAGLAPG 389
Query: 172 ------GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQC------------ 213
G T N +P +Y H L+ HG+ C P+C
Sbjct: 390 AKGTFAGPTRNSTYAHCEVRVPDHLKYPLHQLLIRHGKT-C----PRCRAITGESSEGWD 444
Query: 214 QSCIISNL 221
+ C I +L
Sbjct: 445 EGCPIDHL 452
>gi|295425974|ref|ZP_06818648.1| possible deoxyribonuclease [Lactobacillus amylolyticus DSM 11664]
gi|295064290|gb|EFG55224.1| possible deoxyribonuclease [Lactobacillus amylolyticus DSM 11664]
Length = 228
Score = 41.4 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 81/192 (42%), Gaps = 12/192 (6%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA- 77
+ L +++ + P G + + +I + +L + NV KA K L++++
Sbjct: 1 MAIKITLNQLYDIMYDNM-DPTGWWPGRSDWEVIWSTVLIQNTNWKNVAKALKDLYKVSG 59
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIY-------RKKSENIISLSHILINEFDNKIPQTLEGL 130
PQK+LA+ +++L N I+ G Y + ++ S L + + + L
Sbjct: 60 FLPQKILALTDEELTNAIKKAGFYTRKVKTIQNLAKYFQEYSFDLELMQEMPKEKLRKEL 119
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTP--NKVEQSLLRIIPP 188
+ GIG + A+VIL VD + +R+ +G K K+ + L+
Sbjct: 120 LAIKGIGSETADVILMYGLRKGEFVVDNYSYRLFECLGWKMPKYEKAKKIIEGDLQDFTL 179
Query: 189 KHQYNAHYWLVL 200
++ N H ++
Sbjct: 180 RNYQNFH-AMID 190
>gi|311113309|ref|YP_003984531.1| HhH-GPD family DNA repair protein [Rothia dentocariosa ATCC 17931]
gi|310944803|gb|ADP41097.1| HhH-GPD family DNA repair protein [Rothia dentocariosa ATCC 17931]
Length = 210
Score = 41.4 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 5/169 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
+ + ++ + P F ++V +L +T N A +L + +
Sbjct: 2 ESMRQMMTVLQRAIPDAGVWWPAETKFEILVGAVLVQNTTWTNTETALANLRTLDLLTPE 61
Query: 83 MLAIGEKK-LQNYIRTIGIYRKKSENIISLSHILINEFD----NKIPQTLEGLTRLPGIG 137
A + +Q IR G +R K+ + +++ + Q L + G+G
Sbjct: 62 TFAAADSAVVQEAIRPSGYWRTKTVYLQTVTDWFLTTDTLAESMSDTQLRASLLGVKGVG 121
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ A+ IL A+ D + R+ G T + ++ I
Sbjct: 122 EETADDILLYAYHRGVFIYDAYARRLLAAAGWGDYTTYAQARKACDERI 170
>gi|317034391|ref|XP_003188890.1| 5-Methylcytosine G/T mismatch-specific DNA glycosylase [Aspergillus
niger CBS 513.88]
Length = 362
Score = 41.4 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 36/95 (37%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +F+ T + M + L + I +G +++
Sbjct: 134 HDPFRLLIATIFLNRTRGGVALPVLFKVFDRFPTVEAMASTDTNTLASMIHCLGFQNQRA 193
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
+ I+L+ + K + + G GR
Sbjct: 194 KKCITLAQTWLAFPPTKGKRYRKLHYPCKGDGRDI 228
>gi|168704066|ref|ZP_02736343.1| hypothetical protein GobsU_31319 [Gemmata obscuriglobus UQM 2246]
Length = 268
Score = 41.4 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 183 LRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCK 223
+IP + +H + C + P C C++ C
Sbjct: 203 EHVIPKARGEEFTELMSIHAKETCIEKTPLCGQCVLKGECP 243
>gi|323466481|gb|ADX70168.1| Possible deoxyribonuclease [Lactobacillus helveticus H10]
Length = 221
Score = 41.4 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 73/180 (40%), Gaps = 12/180 (6%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AIGEKKLQNYIR 96
P G + + +I + +L + NV+KA K L++ + + + +++LQ I
Sbjct: 22 DPNGWWPGRSDWEVIWSTVLIQNTNWKNVDKALKILYKATNFLPANILKMSDEELQQTIA 81
Query: 97 TIGIYRKKSENIISLSHILINEFDN--------KIPQTLEGLTRLPGIGRKGANVILSMA 148
+ G Y +K++ + +++ + F+ + + + + GIG + A+VIL
Sbjct: 82 SAGSYTRKAQTLKNIAQYFKDNFNYDLEVAQEQNKKKLRKEILTIKGIGPETADVILMYG 141
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH--YWLVL-HGRYV 205
VD + R+ +G K ++ + + N + ++ G+
Sbjct: 142 LRKGEFVVDQYSRRLFTCLGWQDIPPYEKAKKIIEENLTDFTLRNYQNFHAMIDMFGQKY 201
>gi|145354166|ref|XP_001421363.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581600|gb|ABO99656.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 186
Score = 41.4 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 50 TLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLA----IGEKKLQNYIRTIGIYRKKS 105
+VA L+S Q D +A + L + + L + ++L+ ++ T+ ++R K+
Sbjct: 1 QCLVAALMSVQCLDKVALRAFETLRDSTLDREVTLEAIAAMSTRELEQHLSTLNLFRVKA 60
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN-----VILSMAFGIPTIGVDTHI 160
+ I + + ++ ++F ++P+T+ L LPG+G K A+ G I VDTH+
Sbjct: 61 KYIRACADVIRHKFRGEVPRTVGALKTLPGVGDKLAHLVASVSYGGDEDGFAGIVVDTHV 120
Query: 161 FRISNRIGLAP-GKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCK 207
R++ R+G A G V S+ + + A L+ G+ C
Sbjct: 121 KRVAKRLGWAQAGDDVESVRMSVQARVKREEWEAATLGLIALGQRFCH 168
>gi|197127336|gb|ACH43834.1| putative Endonuclease III-like protein 1 [Taeniopygia guttata]
Length = 235
Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 56/102 (54%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ +++A++LS+Q+ D + A L + +L + ++ L I +G +R K + I
Sbjct: 100 YQVLLALMLSSQTKDQVTSAAMLRLRRRGLSVDSVLQMDDETLGQIIYPVGFWRNKVKYI 159
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ IL ++ IP T+E L +LPG+G K A++ + +A+
Sbjct: 160 KQTTAILKQKYGGDIPSTVEELVQLPGVGPKMAHLAMHIAWD 201
>gi|88657996|ref|YP_507651.1| endonuclease III [Ehrlichia chaffeensis str. Arkansas]
gi|88599453|gb|ABD44922.1| endonuclease III [Ehrlichia chaffeensis str. Arkansas]
Length = 45
Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
WL+LH R+VCK+RKP C C++ +LC+ +
Sbjct: 13 WLILHDRHVCKSRKPLCSQCVVQDLCEYESK 43
>gi|212526396|ref|XP_002143355.1| HhH-GPD family base excision DNA repair protein [Penicillium
marneffei ATCC 18224]
gi|210072753|gb|EEA26840.1| HhH-GPD family base excision DNA repair protein [Penicillium
marneffei ATCC 18224]
Length = 449
Score = 41.0 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSL-----LR 184
L + PGIG K A ++ P VDTHIFRI +G P +V + +
Sbjct: 335 LIKYPGIGPKTAACVVLFCLQRPCFAVDTHIFRICKWLGWLPSSDTKRVTEIMAFSHLEV 394
Query: 185 IIPPKHQYNAHYWLVLHGRYVCKARKPQC 213
IP +Y H L+ HG+ C P+C
Sbjct: 395 RIPDHLKYPLHQLLIRHGKS-C----PRC 418
>gi|315053601|ref|XP_003176175.1| hypothetical protein MGYG_00265 [Arthroderma gypseum CBS 118893]
gi|311338021|gb|EFQ97223.1| hypothetical protein MGYG_00265 [Arthroderma gypseum CBS 118893]
Length = 712
Score = 41.0 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ--SLLRIIP 187
+ PGIG K A ++ P VDTH+FR+S +G P N++ L IP
Sbjct: 341 FVKYPGIGVKTAACVVLFCLQRPCFAVDTHVFRLSKWLGWIPSDKVNEITAFSHLEVRIP 400
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQC 213
+Y+ H + HG+ C P+C
Sbjct: 401 DNLKYSLHQLFIHHGKA-C----PRC 421
>gi|224009405|ref|XP_002293661.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971061|gb|EED89397.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 658
Score = 41.0 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
EL+ N + L+++ +L ++ V+ A L + M ++++ I +G+
Sbjct: 473 ELFIDNPWKLLLSTILLNKTQRNQVDIALFSLLQRWPRVHSMARADWEEIREIISPLGLM 532
Query: 102 RKKSENIISLSHIL 115
K+S++II S
Sbjct: 533 NKRSKSIIRFSKEY 546
>gi|161507569|ref|YP_001577523.1| hypothetical protein lhv_1200 [Lactobacillus helveticus DPC 4571]
gi|160348558|gb|ABX27232.1| hypothetical protein lhv_1200 [Lactobacillus helveticus DPC 4571]
Length = 217
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 73/180 (40%), Gaps = 12/180 (6%)
Query: 38 SPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKML-AIGEKKLQNYIR 96
P G + + +I + +L + NV+KA K L++ + + + +++LQ I
Sbjct: 18 DPNGWWPGRSDWEVIWSTVLIQNTNWKNVDKALKILYKATNFLPANILKMSDEELQQTIA 77
Query: 97 TIGIYRKKSENIISLSHILINEFDN--------KIPQTLEGLTRLPGIGRKGANVILSMA 148
+ G Y +K++ + +++ + F+ + + + + GIG + A+VIL
Sbjct: 78 SAGSYTRKAQTLKNIAQYFKDNFNYDLEVAQEQNKKKLRKEILTIKGIGPETADVILMYG 137
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAH--YWLVL-HGRYV 205
VD + R+ +G K ++ + + N + ++ G+
Sbjct: 138 LRKGEFVVDQYSRRLFTCLGWQDIPPYEKAKKIIEENLTDFTLRNYQNFHAMIDMLGQKY 197
>gi|57167966|ref|ZP_00367105.1| endonuclease III [Campylobacter coli RM2228]
gi|57020340|gb|EAL57009.1| endonuclease III [Campylobacter coli RM2228]
Length = 227
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 36/206 (17%)
Query: 28 IFYLFSLKWPSPKGELYYV----------NHFTLIVAVLLSAQSTDVNVNKATKHLFE-I 76
IF L + + F L+++V+L+ + NV KA +L
Sbjct: 6 IFKKLLA------CNLDFKEFDWLENQGLSDFELLISVILTQNTKWDNVLKALNNLKNAR 59
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI----ISLSHILINEFDNKIPQTLEGLTR 132
+ +++ + +L I+ G Y K++ + + N + K E L
Sbjct: 60 ISSLEQLSNLSNLELATLIKPSGFYNTKAKRLKELANKILDTYSNIENFKKNVDREWLLN 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---------KVEQSL- 182
G+G + + IL+ + VD++ R++ +G + EQ
Sbjct: 120 TKGLGFESVDSILNYLCKREILVVDSYTQRLATHLGYEFENYEELREFFESGIENEQENL 179
Query: 183 LRIIPPKH-----QYNAHYWLVLHGR 203
+I+ K+ H ++ G+
Sbjct: 180 CQILEKKYELFELYQIFHAAIIAFGK 205
>gi|258592427|emb|CBE68736.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 250
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY--NAHYWLVLH 201
I + I D HI R+ R+G P N + R + P + W
Sbjct: 162 IPFSDYYSIDISPDVHIIRVMKRMGFVPSDANNDMVIYKARELNPGFPGIIDFSCW--EI 219
Query: 202 GRYVCKARKPQCQSCIISNLCKRI 225
GR C+ R P C CI+++ C ++
Sbjct: 220 GRKWCRPRTPNCVDCIVTSECNKV 243
>gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 671
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 11/35 (31%)
Query: 188 PKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLC 222
AH L+ +C P C C + C
Sbjct: 630 ADSAREAHLGLIELATSLCTTGTPACGECPLRRSC 664
>gi|88859803|ref|ZP_01134442.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas tunicata D2]
gi|88817797|gb|EAR27613.1| endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on
5-formyluracil and 5-hydroxymethyluracil
[Pseudoalteromonas tunicata D2]
Length = 46
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 171 PGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
GK +V+ L +++P + + + H+WL+LHGRY
Sbjct: 1 MGKDVVEVKMKLDKVVPAEFKVDVHHWLILHGRYT 35
>gi|302843300|ref|XP_002953192.1| hypothetical protein VOLCADRAFT_35340 [Volvox carteri f.
nagariensis]
gi|300261579|gb|EFJ45791.1| hypothetical protein VOLCADRAFT_35340 [Volvox carteri f.
nagariensis]
Length = 133
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E+ Y N + L+VA +L ++T V + L+ TP+ M A + +++ +R +G+
Sbjct: 13 EVLYDNPWRLLVACILLNKTTGRQVRQVLGPLWRSYPTPEAMAAADPRVVEDILRPLGLQ 72
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGV 156
+++E ++ S ++ +L G+GR A+ L G
Sbjct: 73 VRRAERLVRFSEEFLSRQWTCPT-------QLYGVGRYAADAYLIFCKGRWREVQ 120
>gi|321459033|gb|EFX70091.1| hypothetical protein DAPPUDRAFT_35863 [Daphnia pulex]
Length = 144
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 7/133 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L+VA + ++ + T + K++ + + +G++ +
Sbjct: 17 FRDPWQLLVATIFLNKTNGKAATPLIWEFLKRWTTAEVARQADWKEIADLMNPLGLHELR 76
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ I+ +S + K L GI + G++ G T I
Sbjct: 77 AKRIVRMSEDYLKGDWVKPS-------DLYGISKYGSDSYRIFCLGEWKEVRPTDIMLKI 129
Query: 165 NRIGLAPGKTPNK 177
+ L K
Sbjct: 130 YQDWLFTNWKALK 142
>gi|146317864|ref|YP_001197576.1| hypothetical protein SSU05_0208 [Streptococcus suis 05ZYH33]
gi|145688670|gb|ABP89176.1| Uncharacterized protein related to Endonuclease III [Streptococcus
suis 05ZYH33]
Length = 192
Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 11/175 (6%)
Query: 41 GELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGI 100
N +V+++L Q+T+ N +A + L T +L + + LQ IR G
Sbjct: 5 TGWNDENPIKDLVSMILIQQTTEANAKRALEQLEGRL-TIHSLLEMPVEDLQECIRPAGF 63
Query: 101 YRKKSENIISLSHILINEFDNKIPQT-------LEGLTRLPGIGRKGANVILSMAFGIPT 153
+++KS I S+ + + L L G+G + A+VIL
Sbjct: 64 FKQKSLYIRSVVEWANQFDGDFSRLDRVETAVLRKELLSLKGVGNETADVILLYLCRRSV 123
Query: 154 IGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPP---KHQYNAHYWLVLHGRYV 205
D + R+ NR+GL+ + + Q I K H + HG+
Sbjct: 124 FVADQYALRLFNRLGLSQSQDYLSLRQEFTEQIKDWSVKDAQELHALIDEHGKQF 178
>gi|255954435|ref|XP_002567970.1| Pc21g09310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589681|emb|CAP95828.1| Pc21g09310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 951
Score = 40.7 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 36/100 (36%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +FE T + M + + I +G +++
Sbjct: 724 HDPFRLLIATIFLNRTRGGVALPVLFKVFERYPTIEAMAEADLPEFVSMINCLGFQNQRA 783
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
I+L+ +++ +K + + GR
Sbjct: 784 RKCITLAQTWLSDPPHKSKRYRKLHYPRKLDGRNVGREEC 823
>gi|115477908|ref|NP_001062549.1| Os09g0101100 [Oryza sativa Japonica Group]
gi|113630782|dbj|BAF24463.1| Os09g0101100 [Oryza sativa Japonica Group]
Length = 441
Score = 40.7 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 15/180 (8%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLF--SLKWPSPKGELY------YVNHFTLIVAVLLS 58
+ + P L ++ + + P P+ + + +IV +L
Sbjct: 254 ARVNKERKPAPLLSRAEKRSDKYRRLPLDQLVPPPRSPHKLLQEKYASDPWKVIVICMLL 313
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
+ V + K F+ Q + +K+ Y+ +G+ R K I S
Sbjct: 314 NLTQGKQVRRKVKGFFKRYPDAQTAFSADPEKMAKYLAPLGLQRVKVNRIQRFSKAY--- 370
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + +T L G+G+ A+ G T V + + +V
Sbjct: 371 ----VEEEWTYITELCGVGKYAADAYAIFCAGRATEVVPADHKLVDYWKYVCFELPMIQV 426
>gi|150400197|ref|YP_001323964.1| HhH-GPD family protein [Methanococcus vannielii SB]
gi|150012900|gb|ABR55352.1| HhH-GPD family protein [Methanococcus vannielii SB]
Length = 232
Score = 40.7 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 11/189 (5%)
Query: 36 WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYI 95
+P + F + + +L+ + +V K+ +++ E+ + +
Sbjct: 51 YPKTR-----NQCFEICICAILTQNTVYTSVEKSIQNINELM--EITPENMLNLDINLLK 103
Query: 96 RTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
R I ++ L D K+ T L + GIG + A+ +L F IP
Sbjct: 104 RAIKPSGYYNQKSEYLKIFSEFFIDCKLTPTRNELLSIKGIGPETADSMLLYGFKIPNFV 163
Query: 156 VDTHIFRISNRIGLAPGK-TPNKVEQSLLRIIPP--KHQYNAHYWLVLHGRYVCKARKPQ 212
VD + RI + L N +++ +P + H LV HG+ K ++
Sbjct: 164 VDAYTKRILLNLKLINENAKYNDIKELFENSLPKSLEIYQEYHALLVEHGKNYYKKKENY 223
Query: 213 CQSCIISNL 221
C + +
Sbjct: 224 -SKCPLLKI 231
>gi|159488413|ref|XP_001702206.1| hypothetical protein CHLREDRAFT_154125 [Chlamydomonas reinhardtii]
gi|158271315|gb|EDO97137.1| predicted protein [Chlamydomonas reinhardtii]
Length = 200
Score = 40.7 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E+ Y + + L+VA +L ++T V L+ TPQ M A E L+ +R +G++
Sbjct: 97 EMLYNDPWRLLVACILLNRTTGQQVRGVLGPLWRAYPTPQAMAAADEADLRAILRPLGLH 156
Query: 102 RKKSENIISLSHIL 115
++ + SH
Sbjct: 157 NTRAVKLKRFSHDF 170
>gi|331242237|ref|XP_003333765.1| hypothetical protein PGTG_15525 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312755|gb|EFP89346.1| hypothetical protein PGTG_15525 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 348
Score = 40.7 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 3/21 (14%), Positives = 8/21 (38%)
Query: 184 RIIPPKHQYNAHYWLVLHGRY 204
++P + + L+ G
Sbjct: 57 ALVPQDRPGDFNQALMELGAT 77
>gi|301122869|ref|XP_002909161.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
gi|262099923|gb|EEY57975.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
Length = 259
Score = 40.7 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 21/171 (12%)
Query: 19 LYTPKELE------EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKH 72
+ K+ E E+F F P L+ ++++ +LS+Q+ D A
Sbjct: 78 MRAKKDAEVDKYGCEVF--FDENIPPHVCRLH------VLISAMLSSQTKDPVNAAAMGR 129
Query: 73 LFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE------FDNKIPQT 126
L + T + ML I + L IR +G + K++ I IL + IP T
Sbjct: 130 LIKHGLTVKTMLEIDQHDLAQLIRPVGFFNYKAKYIKQTVLILSKQAEAEGKDVVDIPST 189
Query: 127 LEGLTRLPGIGRKGAN-VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
E L LPG+G K A V+ I VDTH+ RISNR+ N
Sbjct: 190 YEELIALPGVGPKMATLVMNCAWKNTVGICVDTHVHRISNRLKWVKTWNKN 240
>gi|320104379|ref|YP_004179970.1| putative DNA glycosylase [Isosphaera pallida ATCC 43644]
gi|319751661|gb|ADV63421.1| putative DNA glycosylase [Isosphaera pallida ATCC 43644]
Length = 243
Score = 40.7 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 202 GRYVCKARKPQCQSCIISN 220
GR CK P+C C +
Sbjct: 213 GREFCKPTAPRCDRCPLRE 231
>gi|157165470|ref|YP_001467041.1| endonuclease III [Campylobacter concisus 13826]
gi|112800449|gb|EAT97793.1| endonuclease III [Campylobacter concisus 13826]
Length = 222
Score = 40.7 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 22/185 (11%)
Query: 42 ELYY--VNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQKMLAIGEKKLQNYIRTI 98
EL + F +I+ +L + NV KA +L D+ Q + A+ +L I+
Sbjct: 20 ELKWPGEGTFEVILGAILVQNTNWKNVEKALDNLKNASKDSLQGICALENSELATLIKPS 79
Query: 99 GIYRKKSEN----IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTI 154
G Y K++ I++ + + + K E L + G+G + + IL+ A G P +
Sbjct: 80 GFYNTKAKRLKTLCIAIKNEFGDFENFKENVGREWLISVRGVGAETCDAILAYACGKPYM 139
Query: 155 GVDTHIFRISNRIGLAPGKTPNKVEQS------------LLRIIPPKHQYNAHYWLVLHG 202
VD + RI E ++ L+L
Sbjct: 140 VVDAYALRIMAYFDYTFESYDEAAEWFSSLDYDEIYKFLDSDKFDEVEVLKLYHALIL-- 197
Query: 203 RYVCK 207
CK
Sbjct: 198 -EFCK 201
>gi|224010940|ref|XP_002294427.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969922|gb|EED88261.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 472
Score = 40.7 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
EL+ N + L+++ +L ++ V+ A L + M ++++ I +G+
Sbjct: 287 ELFIDNPWKLLLSTILLNKTQRNQVDIALFSLLQRWPRVHSMARADWEEIREIISPLGLM 346
Query: 102 RKKSENIISLSHIL 115
K+S++II S
Sbjct: 347 NKRSKSIIRFSKEY 360
>gi|156398265|ref|XP_001638109.1| predicted protein [Nematostella vectensis]
gi|156398269|ref|XP_001638111.1| predicted protein [Nematostella vectensis]
gi|156225227|gb|EDO46046.1| predicted protein [Nematostella vectensis]
gi|156225229|gb|EDO46048.1| predicted protein [Nematostella vectensis]
Length = 143
Score = 40.7 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 39/128 (30%), Gaps = 7/128 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L+V+ + ++ F + + + +R +G++ K+
Sbjct: 17 FHDPWKLLVSSIFLNRTAGTQAIPIMWEFFRRYPDAAEASKADPGPISDLLRPLGLHEKR 76
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
++ ++ S ++ L GIG+ G++ G
Sbjct: 77 AKALVQFSAEFLSRDWIYPD-------TLYGIGKYGSDSYRIFFLGEWKDVKPEDHKLNL 129
Query: 165 NRIGLAPG 172
L
Sbjct: 130 YHDWLWKQ 137
>gi|298706383|emb|CBJ29392.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 419
Score = 40.7 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/147 (10%), Positives = 45/147 (30%), Gaps = 7/147 (4%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
EL + + L++ ++ Q+T ++ E T A ++ + +G+
Sbjct: 260 ELLADDPWKLLIGCIMLNQTTRSQMDPVLVRFLEKFPTADVAAAASVDEMTRVVAPLGLQ 319
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
++ II S +++ + + +G+ A+
Sbjct: 320 ERRPIAIIRFSQEYLSKAWTNVKELYW-------VGKYAADAHKIFIERKWREVQPDDHA 372
Query: 162 RISNRIGLAPGKTPNKVEQSLLRIIPP 188
+ + + + R +P
Sbjct: 373 LNWWVEWMRGTQQAGEPFSAAERSVPA 399
>gi|218201632|gb|EEC84059.1| hypothetical protein OsI_30334 [Oryza sativa Indica Group]
Length = 455
Score = 40.7 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 15/186 (8%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLF--SLKWPSPKGELY------YVNHFTLIVAVLLS 58
+ + P L ++ + + P P+ + + +IV +L
Sbjct: 257 ARVNKERKPAPLLTRAEKRSDKYRRLPLDQLVPPPRSPHKLLQEKYASDPWKVIVICMLL 316
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
+ V + K F+ Q + +K+ Y+ +G+ K I S
Sbjct: 317 NLTQGKQVRRKVKGFFKRYPDAQAAFSADPEKMAKYLAPLGLQHVKVNRIQRFSKAY--- 373
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + +T L G+G+ A+ G V + + +
Sbjct: 374 ----VEEEWTYITELCGVGKYAADAYAIFCAGRAPEVVPADHKLVDYWKYVCFELPMVQQ 429
Query: 179 EQSLLR 184
Q +
Sbjct: 430 SQDMQE 435
>gi|325116131|emb|CBZ51685.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1132
Score = 40.3 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 162 RISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
R N + + KV+++L R IPP + + +C P+C +C + ++
Sbjct: 857 RCFNWLPKDERMSLEKVKETLERWIPPGLYFELPLLFSGLVQLLCGPDTPKCSTCWLGDI 916
Query: 222 CKRIK 226
C +
Sbjct: 917 CPHRQ 921
>gi|222641036|gb|EEE69168.1| hypothetical protein OsJ_28331 [Oryza sativa Japonica Group]
Length = 452
Score = 40.3 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 57/186 (30%), Gaps = 15/186 (8%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLF--SLKWPSPKGELY------YVNHFTLIVAVLLS 58
+ + P L ++ + + P P+ + + +IV +L
Sbjct: 254 ARVNKERKPAPLLSRAEKRSDKYRRLPLDQLVPPPRSPHKLLQEKYASDPWKVIVICMLL 313
Query: 59 AQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINE 118
+ V + K F+ Q + +K+ Y+ +G+ R K I S
Sbjct: 314 NLTQGKQVRRKVKGFFKRYPDAQTAFSADPEKMAKYLAPLGLQRVKVNRIQRFSKAY--- 370
Query: 119 FDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + +T L G+G+ A+ G T V + + +
Sbjct: 371 ----VEEEWTYITELCGVGKYAADAYAIFCAGRATEVVPADHKLVDYWKYVCFELPMIQQ 426
Query: 179 EQSLLR 184
Q +
Sbjct: 427 SQDMQE 432
>gi|296241973|ref|YP_003649460.1| hypothetical protein Tagg_0228 [Thermosphaera aggregans DSM 11486]
gi|296094557|gb|ADG90508.1| hypothetical protein Tagg_0228 [Thermosphaera aggregans DSM 11486]
Length = 317
Score = 40.3 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 195 HYWLVLHGRYVCKAR-KPQCQSCIISNLCKRIK 226
H+W+ HGR +C +P C+ C+ C+ K
Sbjct: 270 HFWI--HGRTICTRSEQPLCEKCMFKGFCRARK 300
>gi|119482736|ref|XP_001261396.1| hypothetical protein NFIA_025720 [Neosartorya fischeri NRRL 181]
gi|119409551|gb|EAW19499.1| hypothetical protein NFIA_025720 [Neosartorya fischeri NRRL 181]
Length = 891
Score = 40.3 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +F+ T Q M KL + I ++G +++
Sbjct: 661 HDPFRLLIATIFLNRTRGGVALPVLFRVFDHFPTAQDMSTAEFSKLVSMIHSLGFQNERA 720
Query: 106 ENIISLSHIL 115
I L+
Sbjct: 721 RKCIDLAKTW 730
>gi|305431883|ref|ZP_07401050.1| endonuclease III [Campylobacter coli JV20]
gi|304444967|gb|EFM37613.1| endonuclease III [Campylobacter coli JV20]
Length = 227
Score = 40.3 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 36/206 (17%)
Query: 28 IFYLFSLKWPSPKGELYYV----------NHFTLIVAVLLSAQSTDVNVNKATKHLFE-I 76
IF L + + F L+++V+L+ + NV KA +L
Sbjct: 6 IFKKLLA------CNLDFKEFDWLENQGLSDFELLISVILTQNTKWDNVLKALNNLKNAR 59
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI----ISLSHILINEFDNKIPQTLEGLTR 132
+ +++ + +L I+ G Y K++ + + N + K E L
Sbjct: 60 ISSLEQLSNLSNLELATLIKPSGFYNTKAKRLKELANKILDTYSNIENFKKNVDREWLLN 119
Query: 133 LPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN---------KVEQSL- 182
G+G + + IL+ + VD++ R++ +G + EQ
Sbjct: 120 TKGLGFESVDSILNYLCKREILVVDSYTQRLATHLGYEFENYEELREFFESGIENEQENL 179
Query: 183 LRIIPPKH-----QYNAHYWLVLHGR 203
+I+ K+ H ++ G+
Sbjct: 180 CQILEKKYELFELYQIFHVAIIAFGK 205
>gi|150403522|ref|YP_001330816.1| HhH-GPD family protein [Methanococcus maripaludis C7]
gi|150034552|gb|ABR66665.1| HhH-GPD family protein [Methanococcus maripaludis C7]
Length = 232
Score = 40.3 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 35 KWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQN 93
++P K F + + +L+ ++ +V K+ K+L + + + + + K L+
Sbjct: 49 EYPKTK-----NQCFEICIGAILTQNTSWPSVEKSLKNLRNLIEITPENVIELDIKLLKE 103
Query: 94 YIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPT 153
I+ G + +KSE + S I K T E L +L G+G + A+ +L AF +P+
Sbjct: 104 AIKPSGYFNQKSERLKGFSEYFIK---LKNTPTREELLKLKGVGPETADSMLLYAFKVPS 160
Query: 154 IGVDTHIFRI-SNRIGLAPGKTPNKVEQSLLRIIPP--KHQYNAHYWLVLHGRYVCKARK 210
VD++ RI N + + +K+++ I + H LV H + + ++
Sbjct: 161 FVVDSYTKRILFNLNLIENDEKYDKIKELFEENIEKNLEMYQEYHALLVEHAKNYYRKKE 220
Query: 211 PQCQSCIISNL 221
C C + +
Sbjct: 221 NYC-KCPLLKI 230
>gi|242800668|ref|XP_002483635.1| pre-mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218716980|gb|EED16401.1| pre-mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 460
Score = 39.9 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F L++A + ++ LF+ T + M A + + + IR +G +++
Sbjct: 215 SPFRLLIATIFLNRTRGPVAIPVLFKLFDFYPTIEDMAAANHEDIVHIIRGLGFQNQRAT 274
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVI 144
I+L+ ++ + + + G A
Sbjct: 275 KFIALARKWLDSPPERGKRYRKLNYPCKKAGTDIAADE 312
>gi|167951159|ref|ZP_02538233.1| HhH-GPD family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 124
Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII--- 186
+ GIG + A+ IL AF P +D + RI +R+G+ P + +
Sbjct: 20 FLSVNGIGPETADDILLYAFERPVFVIDAYTRRIFSRLGMVPTHLAYEALRLAFERALGP 79
Query: 187 PPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKR 224
P+ H +V H + C+ ++P C C ++ C
Sbjct: 80 DPELFNEYHALIVRHAKEACR-KQPDCTVCCLARECDW 116
>gi|27754344|gb|AAO22623.1| unknown protein [Arabidopsis thaliana]
Length = 407
Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 37 PSPKGEL----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
P L ++ + + ++V +L +++ LF + + + E++++
Sbjct: 272 PRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIE 331
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
N I+ +G+ +K+++ I LS + ++ +T+L G+G+ A+ G
Sbjct: 332 NLIKPLGLQKKRTKMIQRLSLEY-------LQESWTHVTQLHGVGKYAADAYAIFCNGNW 384
Query: 153 TIGVDTHIFRISNRIGL 169
L
Sbjct: 385 DRVKPNDHMLNYYWDYL 401
>gi|6648205|gb|AAF21203.1|AC013483_27 hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 37 PSPKGEL----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
P L ++ + + ++V +L +++ LF + + + E++++
Sbjct: 284 PRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIE 343
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
N I+ +G+ +K+++ I LS + ++ +T+L G+G+ A+ G
Sbjct: 344 NLIKPLGLQKKRTKMIQRLSLEY-------LQESWTHVTQLHGVGKYAADAYAIFCNGNW 396
Query: 153 TIGVDTHIFRISNRIGL 169
L
Sbjct: 397 DRVKPNDHMLNYYWDYL 413
>gi|307111443|gb|EFN59677.1| hypothetical protein CHLNCDRAFT_14045 [Chlorella variabilis]
Length = 133
Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + L+VA +L +++ V K LF + TP +A +++Q I+ +G++RK+
Sbjct: 16 FDDPWKLLVACMLLNKTSGAQVRKVIWQLFALCPTPAAAIAADVQQVQALIQPLGLFRKR 75
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG 155
+ I LS + + L GIG+ A+ G
Sbjct: 76 AAAIQQLSQDYLYKQWRDPT-------ELYGIGKYAADAYHMFCRGRWREV 119
>gi|296219347|ref|XP_002755822.1| PREDICTED: endonuclease III-like protein 1-like [Callithrix
jacchus]
Length = 307
Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
+ ++++++LS+Q+ D A + L T +L + L I +G +R K + I
Sbjct: 132 YQVLLSLMLSSQTKDQVTAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYI 191
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
S IL + IP ++ L LPG+G K A++ +++A+GI + +
Sbjct: 192 KQTSAILQQCYGGDIPASVAELVALPGVGPKMAHLAMAVAWGIVSGIGGVWLMSGP 247
>gi|146324820|ref|XP_001481425.1| pre-mRNA splicing factor [Aspergillus fumigatus Af293]
gi|129556643|gb|EBA27298.1| pre-mRNA splicing factor, putative [Aspergillus fumigatus Af293]
Length = 889
Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +FE T Q M KL + I ++G +++
Sbjct: 659 HDPFRLLIATIFLNRTRGGVALPVLFQVFEHFPTAQDMSTAEFSKLVSMIHSLGFQNERA 718
Query: 106 ENIISLSHIL 115
I L+
Sbjct: 719 RKCIDLAKTW 728
>gi|218190781|gb|EEC73208.1| hypothetical protein OsI_07289 [Oryza sativa Indica Group]
Length = 1111
Score = 39.5 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+C P C++C S CK
Sbjct: 758 ICTKVSPNCRACPFSAKCKYY 778
>gi|222622899|gb|EEE57031.1| hypothetical protein OsJ_06813 [Oryza sativa Japonica Group]
Length = 1051
Score = 39.5 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 205 VCKARKPQCQSCIISNLCKRI 225
+C P C++C S CK
Sbjct: 698 ICTKVSPNCRACPFSAKCKYY 718
>gi|42572315|ref|NP_974253.1| HhH-GPD base excision DNA repair family protein [Arabidopsis
thaliana]
gi|114050633|gb|ABI49466.1| At3g07930 [Arabidopsis thaliana]
gi|332641100|gb|AEE74621.1| methyl-CpG-binding domain protein 4 [Arabidopsis thaliana]
Length = 445
Score = 39.5 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 37 PSPKGEL----YYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQ 92
P L ++ + + ++V +L +++ LF + + + E++++
Sbjct: 310 PRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQTRGVISDLFGLCTDAKTATEVKEEEIE 369
Query: 93 NYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
N I+ +G+ +K+++ I LS + ++ +T+L G+G+ A+ G
Sbjct: 370 NLIKPLGLQKKRTKMIQRLSLEY-------LQESWTHVTQLHGVGKYAADAYAIFCNGNW 422
Query: 153 TIGVDTHIFRISNRIGL 169
L
Sbjct: 423 DRVKPNDHMLNYYWDYL 439
>gi|302921021|ref|XP_003053199.1| hypothetical protein NECHADRAFT_77955 [Nectria haematococca mpVI
77-13-4]
gi|256734139|gb|EEU47486.1| hypothetical protein NECHADRAFT_77955 [Nectria haematococca mpVI
77-13-4]
Length = 485
Score = 39.5 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK-TP 175
+ + ++ LT+ PGIG K A+ ++ P+ VDTH+ R++ + P K T
Sbjct: 349 HIHGMHPDEAMQTLTKFPGIGVKTASCVILFCLQQPSFAVDTHVHRLTGWLKWMPPKATR 408
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKARKPQC------QSCIISNLCKR 224
++ L IP +Y H V HGR C+A + + C + L +R
Sbjct: 409 DQTFSHLEVRIPNHLKYGLHKLFVQHGRNCIRCRANTSEGSEEWNNEECPLEGLVER 465
>gi|171184528|ref|YP_001793447.1| hypothetical protein Tneu_0043 [Thermoproteus neutrophilus V24Sta]
gi|170933740|gb|ACB39001.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta]
Length = 315
Score = 39.5 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 200 LHGRYVCKARKPQCQSCIISNLCKRI 225
G C R +C SC I ++C+R
Sbjct: 286 DIGARYC--RDLKCDSCPIRDVCRRY 309
>gi|242008567|ref|XP_002425074.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508739|gb|EEB12336.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 168
Score = 39.1 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 45/133 (33%), Gaps = 7/133 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
EL Y + + L++ + +S + + +TP+ ++ E++++ I+ +G+
Sbjct: 37 ELLYHDPWKLLICTIFLQKSNGKSAIPIFWEFIKRWNTPEALIDEKEEEIEKLIKPLGLQ 96
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+K++ + S + + L GIG+ G +
Sbjct: 97 KKRAFMLKKFSKEYLYKAWKYP-------IELHGIGKYGNDSYRIFCVNEWKHVQPNDTK 149
Query: 162 RISNRIGLAPGKT 174
L
Sbjct: 150 LTLYHNWLQENHN 162
>gi|239610225|gb|EEQ87212.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 397
Score = 39.1 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 7/141 (4%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLF------SLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
S Y P Y P+E + + + +L + + F L+++ + +
Sbjct: 124 SPKYMAKQPKKSPYFPQERRNAASCLPFPPISAQSFGLIQEKLAH-DPFRLLISTIFLNR 182
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ +FE T + E+ + IR +G ++ I+L+ + I+
Sbjct: 183 TRGEVAIPVLYSVFERYPTVAALAEAQEEDVVEMIRCLGFQNARARKCIALAKLWIDNPP 242
Query: 121 NKIPQTLEGLTRLPGIGRKGA 141
K + + G GR
Sbjct: 243 AKGKRYRKLHYPNKGDGRDIK 263
>gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 642
Score = 39.1 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 205 VCKARKPQCQSCIISNLCKR 224
VC+ P+C C +S C+R
Sbjct: 601 VCRPAAPRCTECPLSTTCRR 620
>gi|159041367|ref|YP_001540619.1| hypothetical protein Cmaq_0794 [Caldivirga maquilingensis IC-167]
gi|157920202|gb|ABW01629.1| conserved hypothetical protein [Caldivirga maquilingensis IC-167]
Length = 315
Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 201 HGRYVCKARKPQCQSCIISNLCKRIK 226
GR C KP C C + + C +
Sbjct: 274 LGRSTCIRDKPNCGKCQLRSACNAYR 299
>gi|269976943|ref|ZP_06183917.1| endonuclease III [Mobiluncus mulieris 28-1]
gi|269934774|gb|EEZ91334.1| endonuclease III [Mobiluncus mulieris 28-1]
Length = 227
Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 18/207 (8%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
S S + +PL E+F L + + F + + +L+ + NV
Sbjct: 4 SKSAKSQTPLS-------FRELFELLASQV-EAGTWWPGETRFEIALGAVLTQNTAWTNV 55
Query: 67 NKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN---- 121
+A +L + PQ +LA+ E L I G +R K+ + +L+ +
Sbjct: 56 ERALGNLRDAGLLHPQGILAVDEAHLGELIHPCGYWRTKAAYVKTLTAWFVVHDSRAQGL 115
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVE-- 179
L L GIG + A+ +L + P D + R+ G +T +
Sbjct: 116 PTDDLRAELLTLRGIGAETADDLLLYVYNRPVFIYDLYARRLLAVAGFGDFQTYERARVA 175
Query: 180 ---QSLLRIIPPKHQYNAHYWLVLHGR 203
+ H +V G+
Sbjct: 176 LDSRVASCNFSVTELATFHGLIVDAGK 202
>gi|45358149|ref|NP_987706.1| endonuclease III-like protein [Methanococcus maripaludis S2]
gi|44920906|emb|CAF30142.1| uncharacterized endonuclease III related protein [Methanococcus
maripaludis S2]
Length = 232
Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 34/218 (15%)
Query: 19 LYTPKELEEIFYLFSLKWP----SPKGELYYVNH-----------------------FTL 51
+ + ++I+ + P E+ N F +
Sbjct: 1 MDNKETFQKIYDHLFNLYGPQGWWPLLEVNGCNPTKTGSINGYHPNNYEYPKTKNQCFEV 60
Query: 52 IVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK-LQNYIRTIGIYRKKSENIIS 110
+ +L+ ++ +V K+ K+L ++ + + + + + L+ I+ G Y +KS +
Sbjct: 61 CIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQLKEAIKPSGYYNQKSVRLKG 120
Query: 111 LSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLA 170
S I + L +L G+G + A+ +L AF +P+ VD + RI + L
Sbjct: 121 FSEFFIKLNHVPTRE---ELLKLNGVGPETADSMLLYAFKVPSFVVDAYTKRILINLNLI 177
Query: 171 PG-KTPNKVEQSLLRIIPPKH--QYNAHYWLVLHGRYV 205
G + +K+++ + H +V H +
Sbjct: 178 DGSEKYDKIKELFEENVEKNLEIYQEYHALIVEHAKNY 215
>gi|121711395|ref|XP_001273313.1| pre-mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
gi|119401464|gb|EAW11887.1| pre-mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
Length = 870
Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 34/100 (34%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L+VA + ++ +F+ T ++M L + I +G +++
Sbjct: 640 HDPFRLLVATIFLNRTRGGVALPVLFKVFDQYPTVEEMSKADLLSLVSMIHCLGFQNQRA 699
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ I L+ + + + + G+
Sbjct: 700 QKCIGLAQTWLARPPTRGKRYRKLHYPCRLDGKDVGCDEC 739
>gi|37360945|dbj|BAC98381.1| mutY homolog alpha [Mus musculus]
Length = 137
Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 6/67 (8%), Positives = 18/67 (26%), Gaps = 11/67 (16%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVN-----------HFTLIVAVLLSAQSTDVNVNKATK 71
++ + K +L + N + + V+ ++ Q+ V
Sbjct: 62 ADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYT 121
Query: 72 HLFEIAD 78
+
Sbjct: 122 RWMQKWP 128
>gi|227876146|ref|ZP_03994264.1| deoxyribonuclease (pyrimidine dimer) [Mobiluncus mulieris ATCC
35243]
gi|227843302|gb|EEJ53493.1| deoxyribonuclease (pyrimidine dimer) [Mobiluncus mulieris ATCC
35243]
Length = 227
Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 18/207 (8%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNV 66
S S + +PL E+F L + + F + + +L+ + NV
Sbjct: 4 SKSAKSQTPLS-------FRELFELLASQV-EAGTWWPGETRFEIALGAVLTQNTAWTNV 55
Query: 67 NKATKHLFEIA-DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDN---- 121
+A +L E PQ +LA+ E +L I G +R K+ + +L+
Sbjct: 56 ERALGNLREAGLLHPQGILAVDEARLGELIHPCGYWRTKAAYVKTLTAWFAVHDSRAQGL 115
Query: 122 KIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQS 181
L L GIG + A+ +L + P D + R+ G +T + +
Sbjct: 116 PTDDLRAELLTLRGIGAETADDLLLYVYNRPVFIYDLYARRLLAVAGFGDFQTYERARTA 175
Query: 182 LLRI-----IPPKHQYNAHYWLVLHGR 203
L H +V G+
Sbjct: 176 LDSRVTTCDFSVTELATFHGLIVDAGK 202
>gi|261192703|ref|XP_002622758.1| methyl-CpG-binding domain-containing protein 4 [Ajellomyces
dermatitidis SLH14081]
gi|239589240|gb|EEQ71883.1| methyl-CpG-binding domain-containing protein 4 [Ajellomyces
dermatitidis SLH14081]
Length = 331
Score = 38.7 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 7/141 (4%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFYLF------SLKWPSPKGELYYVNHFTLIVAVLLSAQ 60
S Y P Y P+E + + + +L + + F L+++ + +
Sbjct: 58 SPKYMAKQPKKSPYFPQERRNAASCLPFPPISAQSFGLIQEKLAH-DPFRLLISTIFLNR 116
Query: 61 STDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD 120
+ +FE T + E+ + IR +G ++ I+L+ + I+
Sbjct: 117 TRGEVAIPVLYSVFERYPTVAALAEAQEEDVVEMIRCLGFQNARARKCIALAKLWIDNPP 176
Query: 121 NKIPQTLEGLTRLPGIGRKGA 141
K + + G GR
Sbjct: 177 AKGRRYRKLHYPNKGDGRDIK 197
>gi|122693104|emb|CAL88856.1| A/G specific adenine glycosylase [Helicobacter pylori]
Length = 140
Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 69 ATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLE 128
E T + + +++ R +G Y +++N+ + I E ++++P +
Sbjct: 1 FYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYS-RAKNLKKSAEICAKEHNSQLPNDYQ 59
Query: 129 GLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS-NRIGLAPGKTPNKVEQSLLRIIP 187
L +LPGIG AN IL F + VD +I R+ GL P T ++ +
Sbjct: 60 SLLKLPGIGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNITAKDLQIKANDFLN 119
Query: 188 PKHQYNAHYWLVLHGRYVCKA 208
+N + L+ +C
Sbjct: 120 LNESFNHNQALIDLRALICSP 140
>gi|301779644|ref|XP_002925241.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
4-like [Ailuropoda melanoleuca]
Length = 642
Score = 38.4 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 43/153 (28%), Gaps = 14/153 (9%)
Query: 30 YLFSLKWPSPKGELYY------VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKM 83
F P P + + L++A ++ +Q++ E + +
Sbjct: 475 KAFKKWIP-PWSPFNFVQETPLHDPQKLLIATVILSQTSGKMATPVLWRFLEKYPSAKVA 533
Query: 84 LAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANV 143
+ + +R +G+Y ++ + S + + + G+GR G +
Sbjct: 534 RTPDRRDVSEPLRPLGLYDLGAKTTVKFSDEYLTKQWRYP-------IEVXGMGRYGNDS 586
Query: 144 ILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPN 176
V +++
Sbjct: 587 XRVFFCINEWKQVHPEDHKLNKHQDWLWENCEK 619
>gi|302422168|ref|XP_003008914.1| DNA base excision repair N-glycosylase [Verticillium albo-atrum
VaMs.102]
gi|261352060|gb|EEY14488.1| DNA base excision repair N-glycosylase [Verticillium albo-atrum
VaMs.102]
Length = 317
Score = 38.4 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENI 108
F +++++++S+Q+ D A L + P + A L+N + + +
Sbjct: 105 FQILISLMMSSQTKDTVNAVAMGRLHDELP-PHEAGAPPGLNLENILAVEPAKLNELIRV 163
Query: 109 ISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIG-VDTHIFRISNRI 167
+L + FD IP T++GLT LPG+G K A++ LS A+G VD H+ RI+N
Sbjct: 164 QEAL-LLRDNFDADIPPTIDGLTSLPGVGPKMAHLCLSAAWGRTEGIGVDVHVHRITNMW 222
Query: 168 GLAPGKTPNKVEQSLLR-IIPPKHQYNAHYWLVLH 201
G+A + + S L +P + + LV
Sbjct: 223 GVAQRQRAPRPRASPLEAWLPRDRWHEINTLLVGL 257
>gi|170085275|ref|XP_001873861.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651413|gb|EDR15653.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 242
Score = 38.4 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 51/185 (27%), Gaps = 26/185 (14%)
Query: 27 EIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAI 86
E++ + P E+ + + L+VAV +++ ++ TP + +
Sbjct: 32 ELYREVCHRKPLLIQEIVAGDPWKLLVAVTFLNKTSGKIAIPVFWNVIARWPTPLMLSRV 91
Query: 87 GEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQT-------------------- 126
E +L + I+ +G +++ ++ LS + + +
Sbjct: 92 DENELIDAIQHLGTQNIRAKRLVLLSRAYLQDPPSFYDLRPSKPGVVTLQLTKSTESSIR 151
Query: 127 ------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQ 180
++ LPG G + + L
Sbjct: 152 QKTRYPPTPISHLPGTGPYALDSYRIFCTLHHDPSSNEWQNVTPTDKELIRFLKWKWAVA 211
Query: 181 SLLRI 185
+
Sbjct: 212 EHRQW 216
>gi|242223699|ref|XP_002477437.1| predicted protein [Postia placenta Mad-698-R]
gi|220722987|gb|EED77364.1| predicted protein [Postia placenta Mad-698-R]
Length = 834
Score = 38.4 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 14/164 (8%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E + + L+VAV L ++ + A L + T + + LQ I +G+
Sbjct: 8 EYVAHDPWKLLVAVTLLNKTAGTHAVPAFLALTDAWPTAHALARAPQGVLQARIAHLGLG 67
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
R +SE +I+LS + + G+G A +
Sbjct: 68 RSRSERLIALSQAYCADPPVRGNVRPSRCYVDVGVG----------AQRQRYPPTEASHL 117
Query: 162 RISNRIGLAPGKTPNKVEQSLLRIIPPK----HQYNAHYWLVLH 201
S L + E ++P ++ ++
Sbjct: 118 PGSGPYALDSYRIFCAGEDEWKAVMPRDKELVRYLRWNWAVMAF 161
>gi|212540798|ref|XP_002150554.1| pre-mRNA splicing factor, putative [Penicillium marneffei ATCC
18224]
gi|210067853|gb|EEA21945.1| pre-mRNA splicing factor, putative [Penicillium marneffei ATCC
18224]
Length = 386
Score = 38.4 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 2/146 (1%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F L++A + ++ LF++ T + M + + + IR +G +++
Sbjct: 139 SPFRLLIATIFLNRTRGPVAIPVLFKLFDVYPTIEDMASANHEDIVAIIRGLGFQNQRAT 198
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
I+L+ + K + + L G A+ + G R++
Sbjct: 199 KFIALARKWLESPPEKGKRYRKLNYPLKRDGADIASDEIVPDEDDHYAGDGQSDKRVAWE 258
Query: 167 IGLAPGKTPNKVEQSLLRIIPPKHQY 192
I PG + RI H
Sbjct: 259 IAHLPGVGAYAI--DSWRIFCRDHLR 282
>gi|152992788|ref|YP_001358509.1| endonuclease III [Sulfurovum sp. NBC37-1]
gi|151424649|dbj|BAF72152.1| endonuclease III [Sulfurovum sp. NBC37-1]
Length = 202
Score = 38.4 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 10/183 (5%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
L P+ F ++V LL+ +T NV K+ K+L +
Sbjct: 12 LESLELLSHRPRYWWPNAGSFEVVVGALLTQNTTWKNVEKSLKNLEGHLTLEGLLKLDEV 71
Query: 89 KKLQNYIRTIGIYRKKSENII---SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVIL 145
+ ++ + +K + +++ + T E L + G+G + A+ IL
Sbjct: 72 QLKEHIYPSGFYNQKAPRLLTLAGNIAEDFRTFERFQSEVTREWLLKQKGVGPETADSIL 131
Query: 146 SMAFGIPTIGVDTHIFRISNRIGLA---PGKTPNKVEQSLLRIIPPKHQY----NAHYWL 198
A + VD++ R+ G+ +E+ + P + H +
Sbjct: 132 CYACFRDEMVVDSYTQRVLREHGIVLQNYTSYKTFLEEGIREQFPKEDINLIFARFHGMI 191
Query: 199 VLH 201
V +
Sbjct: 192 VEY 194
>gi|302652487|ref|XP_003018093.1| hypothetical protein TRV_07896 [Trichophyton verrucosum HKI 0517]
gi|291181699|gb|EFE37448.1| hypothetical protein TRV_07896 [Trichophyton verrucosum HKI 0517]
Length = 276
Score = 38.4 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L++A + ++ +FE T + + +L I+ +G+ ++
Sbjct: 43 PFRLLIATIFLNRTRGEVAMPVICSVFEHYPTIEALANANFDELVLLIQRLGLQNSRARK 102
Query: 108 IISLSHILINEFDNK 122
I+L+ I
Sbjct: 103 CIALAKAWIENAPEC 117
>gi|309792787|ref|ZP_07687230.1| HhH-GPD family protein [Oscillochloris trichoides DG6]
gi|308225151|gb|EFO78936.1| HhH-GPD family protein [Oscillochloris trichoides DG6]
Length = 266
Score = 38.4 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 48/226 (21%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
F ++V ++ Q+ V A + L P + + +IR Y +K+E
Sbjct: 36 AFEILVGAVVVQQTRWEVVEAAMQRLIAAEMLNPPALAHADPAAIVAHIRPAAFYSQKAE 95
Query: 107 NIISLSHILINEFDNKIPQT--------LEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
+ ++ L + + Q L LP IG + +V+L A P +D
Sbjct: 96 GLRQIAQHLCTHYAGSMAQMLAQPTATLRPELLALPRIGPETCDVVLLYAGAHPIFVIDE 155
Query: 159 HIFRISNRIG-------LAPGKTPNK----VEQSLLRII-----PPKHQYNAHYWLVLHG 202
+ R+ RI K +E + I + H +
Sbjct: 156 YTRRLFERIWPQPHAAKPIWRTPYEKLRTLIEDQIQAPIIHGMERRDFYADFHAQINEVC 215
Query: 203 RYVCKARKPQCQ----------------------SCIISNLCKRIK 226
C++R P+C +C + +C K
Sbjct: 216 VRYCRSR-PRCDGPPARRIYSVQAGRESYLASDAACPLREMCGWYK 260
>gi|326533618|dbj|BAK05340.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1137
Score = 38.0 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 18/176 (10%)
Query: 3 SSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQST 62
+ K+SD Y+ PL L +P L K+ + + +I+ + +
Sbjct: 979 AEKRSDKYR-RVPLDQLVSPPRSP--HNLLQEKY--------ASDPWKVILICVFLNLTQ 1027
Query: 63 DVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNK 122
+ V + + FE P + K+ Y+ +G+ ++ NI LS
Sbjct: 1028 GIQVKRMLEGFFERYPDPLSAINADPDKMAEYLAPLGLNNVRTRNIKKLSKQY------- 1080
Query: 123 IPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ +T+L G+G+ A+ G V + + ++
Sbjct: 1081 VGNEWTHVTQLCGVGKYAADAYAIFCAGRAREVVPDDHKLVDYWNYVCFELPMAQM 1136
>gi|326475443|gb|EGD99452.1| hypothetical protein TESG_06887 [Trichophyton tonsurans CBS 112818]
gi|326477480|gb|EGE01490.1| methyl-CpG binding domain-containing protein 4 [Trichophyton
equinum CBS 127.97]
Length = 276
Score = 38.0 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 10/114 (8%)
Query: 4 SKKSDSYQGNSP--LGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
K S ++ P C+ P +F L K L + F L++A + ++
Sbjct: 5 QKTSPYFKRKRPDIASCIPFPPTSTAVFGLIQEK-------LAHE-PFRLLIATIFLNRT 56
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHIL 115
LFE T + + +L I+ +G+ ++ I+L+
Sbjct: 57 RGEVAIPVICSLFEHYPTIESLANANFDELVPLIQRLGLQNSRARKCIALAKAW 110
>gi|302497769|ref|XP_003010884.1| hypothetical protein ARB_02923 [Arthroderma benhamiae CBS 112371]
gi|291174429|gb|EFE30244.1| hypothetical protein ARB_02923 [Arthroderma benhamiae CBS 112371]
Length = 276
Score = 38.0 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L++A + ++ +FE T + + +L I+ +G+ ++
Sbjct: 43 PFRLLIATIFLNRTRGEVAMPVICSVFEHYPTIEALANANFDELVLLIQRLGLQNSRARK 102
Query: 108 IISLSHILINEFDNK 122
I+L+ I
Sbjct: 103 CIALAKAWIENAPEC 117
>gi|225678163|gb|EEH16447.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1144
Score = 38.0 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ ++FE T + E+ + IR +G+ ++
Sbjct: 41 HDPFRLLIATIFLNRTRGEVAIPVLYNVFERYPTVSALAEAREEDVVTMIRCLGLQNARA 100
Query: 106 ENIISLSHILINEFD 120
I+L+ + I
Sbjct: 101 RKCINLAKLWIENPP 115
>gi|315051418|ref|XP_003175083.1| methyl-CpG binding domain-containing protein 4 [Arthroderma gypseum
CBS 118893]
gi|311340398|gb|EFQ99600.1| methyl-CpG binding domain-containing protein 4 [Arthroderma gypseum
CBS 118893]
Length = 276
Score = 38.0 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L+VA + ++ +FE T + + +L + IR +G +++
Sbjct: 43 PFRLLVATIFLNRTRGEVAIPVLYSVFEHYPTIESLANADFDELVSLIRRLGFQNSRAKK 102
Query: 108 IISLSHIL 115
I+L+
Sbjct: 103 CIALAKAW 110
>gi|159123198|gb|EDP48318.1| 5-Methylcytosine G/T mismatch-specific DNA glycosylase, putative
[Aspergillus fumigatus A1163]
Length = 274
Score = 38.0 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +FE T Q M KL + I ++G +++
Sbjct: 44 HDPFRLLIATIFLNRTRGGVALPVLFQVFEHFPTAQDMSTAEFSKLVSMIHSLGFQNERA 103
Query: 106 ENIISLSHIL 115
I L+
Sbjct: 104 RKCIDLAKTW 113
>gi|154280659|ref|XP_001541142.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411321|gb|EDN06709.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 295
Score = 37.6 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +FE T + E+ + I +G ++
Sbjct: 66 HDPFRLLIATIFLNRTRGEVAIPVLYSVFERYPTVAALAEAQEEDVVGMIHCLGFQNARA 125
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
I+L+ + + + K + + G GR
Sbjct: 126 RKCIALAKLWVEDPPVKGKRYRKLHYPNKGDGRDIK 161
>gi|115701262|ref|XP_001197967.1| PREDICTED: similar to methyl-CpG binding domain protein 4, partial
[Strongylocentrotus purpuratus]
gi|115749791|ref|XP_001202024.1| PREDICTED: similar to methyl-CpG binding domain protein 4, partial
[Strongylocentrotus purpuratus]
Length = 147
Score = 37.6 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 34/72 (47%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ + + +VA + ++ F+ DTP+K + + + + I+ +G++ K+
Sbjct: 76 FHDPWKHLVATIFLNRTKGSKAIPVLWQFFQTWDTPEKTRSADWQSIADLIQPLGLHTKR 135
Query: 105 SENIISLSHILI 116
++ +I S +
Sbjct: 136 AKMLIQFSGKYM 147
>gi|119720486|ref|YP_920981.1| hypothetical protein Tpen_1583 [Thermofilum pendens Hrk 5]
gi|119525606|gb|ABL78978.1| hypothetical protein Tpen_1583 [Thermofilum pendens Hrk 5]
Length = 295
Score = 37.6 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 49/221 (22%), Gaps = 32/221 (14%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQK 82
L + +P + + + AV LS ++ +
Sbjct: 80 DRLYWLLEALEEAYPGLGLSVDTYDPLHIFTAVFLSQSTSYHVNVLSWARRLWRMSGDPL 139
Query: 83 MLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGAN 142
A + + + + + + L R +G K A+
Sbjct: 140 EAAELAPGIGGSYQ--------LRRLPQAVRCVAGGWPRDSAELRLFLLRCRFVGPKTAD 191
Query: 143 VILSMAFGIPTIGVDTHIFRISN----------------RIGLAPGKTPNKVEQSLLRII 186
L A F N G P LR +
Sbjct: 192 ATLLFARADTASAPVDRHFAAMNRRLGLFEGVRLPEARLCRRYRCGDCP--ARGDCLRWL 249
Query: 187 PPKHQYNAHYW----LVLHGRYVCKARKPQCQSCIISNLCK 223
+ W L +H R C C C + C+
Sbjct: 250 AAECFGRLAGWVQTALYVHDRKYCSRGG--CGECPLRRECR 288
>gi|300741234|ref|ZP_07071255.1| DNA repair protein, HhH-GPD family [Rothia dentocariosa M567]
gi|300380419|gb|EFJ76981.1| DNA repair protein, HhH-GPD family [Rothia dentocariosa M567]
Length = 215
Score = 37.6 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 23 KELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFE-IADTPQ 81
+ + ++ + P F ++V +L +T N A +L TP+
Sbjct: 7 ESMRQMMTVLQCAIPDVGVWWPAETKFEILVGAVLVQNTTWTNTETALANLRTLNLLTPE 66
Query: 82 KMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFD----NKIPQTLEGLTRLPGIG 137
+ A +Q+ IR G +R K+ + +++ + Q L + G+G
Sbjct: 67 TLAAADSAVVQDAIRPSGYWRTKTVYLQTVTDWFLTTDTLAESMGDAQLRASLLGVKGVG 126
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRII 186
+ A+ IL A+ D + R+ G T + ++ I
Sbjct: 127 EETADDILLYAYHRGVFIYDAYARRLLAAAGWGDYTTYAQARKACDERI 175
>gi|253570952|ref|ZP_04848360.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
gi|251839901|gb|EES67984.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
Length = 217
Score = 37.6 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 139 KGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWL 198
K +++ + D I N + +++ I+P +H HY +
Sbjct: 6 KNSHMKICTWNSQGNPLNDAIKLNILNHLLTTEQCNVVMIQECGNFILPAQHSGRYHYVV 65
Query: 199 VLH-GRYVCKARKPQCQSCIISNL 221
V H G Y +C +CII++L
Sbjct: 66 VEHAGAY-----NCRCNTCIIADL 84
>gi|218883678|ref|YP_002428060.1| iron-sulfur cluster loop [Desulfurococcus kamchatkensis 1221n]
gi|218765294|gb|ACL10693.1| iron-sulfur cluster loop [Desulfurococcus kamchatkensis 1221n]
Length = 317
Score = 37.6 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 197 WLVLHGRYVCKARKP-QCQSCIISNLCKRIK 226
WL+ GR +C P +C C+ C+ +
Sbjct: 272 WLM--GRRICLRDNPPRCDKCLFKGFCRARR 300
>gi|302812133|ref|XP_002987754.1| hypothetical protein SELMODRAFT_6975 [Selaginella moellendorffii]
gi|302821198|ref|XP_002992263.1| hypothetical protein SELMODRAFT_4607 [Selaginella moellendorffii]
gi|300139913|gb|EFJ06644.1| hypothetical protein SELMODRAFT_4607 [Selaginella moellendorffii]
gi|300144373|gb|EFJ11057.1| hypothetical protein SELMODRAFT_6975 [Selaginella moellendorffii]
Length = 139
Score = 37.6 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 7/131 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E + + + +++A + ++T K F++ PQ ++ + ++ I+ +G++
Sbjct: 13 EKLFHDPWKVVMACIFLHRTTGAQTKKMLWDFFKLFPGPQHLIDAPAEMVEPLIKPLGLH 72
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+K+ E I SH + +++L G+G + + G +
Sbjct: 73 KKRLELIKRFSHEY-------LYTDWTDISQLHGVGTYAEDAYMIFVEGRWKEVIPDDAM 125
Query: 162 RISNRIGLAPG 172
L
Sbjct: 126 LEQYWNWLHVN 136
>gi|225558088|gb|EEH06373.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 270
Score = 37.6 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
N F L++A + ++ +FE T + E+ + IR +G ++
Sbjct: 41 HNPFRLLIATIFLNRTRGEVAIPVLYSVFERYPTVAALAEAQEEDVVGMIRCLGFQNARA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
I+L+ + + K + + G GR
Sbjct: 101 RKCIALAKLWVENPPVKGKRYRKLHYPNKGDGRDIK 136
>gi|268324062|emb|CBH37650.1| conserved hypothetical protein [uncultured archaeon]
Length = 209
Score = 37.2 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
LV G CK + +C+ C + + C
Sbjct: 181 ALVKLGIKYCKRK--RCEECPVKDFC 204
>gi|268323428|emb|CBH37016.1| conserved hypothetical protein [uncultured archaeon]
Length = 209
Score = 37.2 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 197 WLVLHGRYVCKARKPQCQSCIISNLC 222
LV G CK + +C+ C + + C
Sbjct: 181 ALVKLGIKYCKRK--RCEECPVKDFC 204
>gi|327355272|gb|EGE84129.1| methyl-CpG-binding domain-containing protein 4 [Ajellomyces
dermatitidis ATCC 18188]
Length = 270
Score = 37.2 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L+++ + ++ +FE T + E+ + IR +G ++
Sbjct: 41 HDPFRLLISTIFLNRTRGEVAIPVLYSVFERYPTVAALAEAQEEDVVEMIRCLGFQNARA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
I+L+ + I+ K + + G GR
Sbjct: 101 RKCIALAKLWIDNPPAKGRRYRKLHYPNKGDGRDIK 136
>gi|294945932|ref|XP_002784887.1| endonuclease iii, putative [Perkinsus marinus ATCC 50983]
gi|239898152|gb|EER16683.1| endonuclease iii, putative [Perkinsus marinus ATCC 50983]
Length = 192
Score = 37.2 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 127 LEGLTRLPGIGRKGANVILSMAFGIPT--IGVDTHIFRISNRIGLAPG-KTPNKVEQSLL 183
+E L LPG+G K A +++ + G I VDTH+ RI+ +G KTP Q L
Sbjct: 1 MEDLLSLPGVGPKMAVLVMEIGHGHRDAGICVDTHVHRIAAMLGWTKNAKTPEATRQQLE 60
Query: 184 RIIPPKHQYNAHYWLVLHGRYVCKARKP-----QCQSC--IISNL 221
+P K + + LV G+ V ++P +C C ++ L
Sbjct: 61 ARLPLKVWPDVNLLLVGLGQMV--QQRPFELLRRCIDCIHPLAAL 103
>gi|217031902|ref|ZP_03437404.1| hypothetical protein HPB128_3g21 [Helicobacter pylori B128]
gi|216946371|gb|EEC24976.1| hypothetical protein HPB128_3g21 [Helicobacter pylori B128]
Length = 95
Score = 37.2 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 25 LEEIFYLFSLKWPS-PKGELYYVN------HFTLIVAVLLSAQSTDVNVNKATK-HLFEI 76
+E + + + L + N + + ++ ++S Q+ V + +
Sbjct: 1 METLHNALLKWYEEFGRKGLPFRNLKGVNAPYEVYISEVMSQQTQISTVIERFYSPFLKA 60
Query: 77 ADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
T + + +++ R +G Y +
Sbjct: 61 FPTLKDLANAPLEEVLLLWRGLGYYLRAK 89
>gi|299115741|emb|CBN74306.1| biotin synthase [Ectocarpus siliculosus]
Length = 415
Score = 37.2 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/161 (8%), Positives = 47/161 (29%), Gaps = 2/161 (1%)
Query: 20 YTPKELEEIFY--LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIA 77
+T +E+ E++ + L + + + + + LLS ++ +
Sbjct: 60 WTKEEIREVYEMPMLELLYRASSVHRMFFDPTEVQQCTLLSIKTGGCTEDCGYCSQSVRH 119
Query: 78 DTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIG 137
T K + + + + + L+ + + G+G
Sbjct: 120 KTFVKPTPQMKIDEVMAAAKRAKEAGSTRFCMGAAWRELGNKKKAFNNILDMVREVNGMG 179
Query: 138 RKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + + + + ++ + + P+ +
Sbjct: 180 MEVCCTLGMLNGEQAKQLKEAGLTAYNHNLDTSREFYPSVI 220
>gi|6716737|gb|AAF26723.1|AF216210_1 alpha-esterase 2 [Drosophila buzzatii]
Length = 565
Score = 37.2 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 12/181 (6%), Positives = 43/181 (23%), Gaps = 11/181 (6%)
Query: 21 TPKELEEIFYLFSLKW-PSPKGE----------LYYVNHFTLIVAVLLSAQSTDVNVNKA 69
TP++LE++ + + E + + + ++++ + +
Sbjct: 382 TPEQLEQLVRRLKQLYFGDEQRECMKLFEALDIFSHRQIWHDLHRMVMARLTYAPDTPTY 441
Query: 70 TKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEG 129
+ + + + N+++ + I + +
Sbjct: 442 LYRFDFDSPHFNQFRWLVCGDRVRGVSHGDYLSYLFYNVLATKLSKSSPEYLTIKRMVGM 501
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
T S + D + + P ++ K
Sbjct: 502 WTTFAANSDPNCWATASNKWTPVQHTPDRAHNCFNISSEMEMIALPEATALAIWDTFYDK 561
Query: 190 H 190
+
Sbjct: 562 N 562
>gi|46128543|ref|XP_388825.1| hypothetical protein FG08649.1 [Gibberella zeae PH-1]
Length = 486
Score = 37.2 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 117 NEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAP-GKTP 175
+ + ++ LT+ PGIG K A+ ++ P+ VDTH+ RIS + P T
Sbjct: 349 HIHGMVPDEAMQTLTKFPGIGVKTASCVILFCLQQPSFAVDTHVHRISGWLKWMPRKATR 408
Query: 176 NKVEQSLLRIIPPKHQYNAHYWLVLHGRYV--CKARKPQC------QSCIISNL 221
++ L IP +Y H V HGR C+A + C + L
Sbjct: 409 DQTFSHLEVRIPDHLKYGLHKLFVQHGRSCIRCRANTSEGSEEWNKSECPLDEL 462
>gi|325095812|gb|EGC49122.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 270
Score = 37.2 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ +FE T + E+ + IR +G ++
Sbjct: 41 HDPFRLLIATIFLNRTRGEVAIPVLYSVFERYPTVAALAEAQEEDVVGMIRCLGFQNARA 100
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGA 141
I+L+ + + K + + G GR
Sbjct: 101 RKCIALAKLWVESPPVKGKRYRKLHYPNKGDGRDIK 136
>gi|148681796|gb|EDL13743.1| RIKEN cDNA 2700094F01, isoform CRA_b [Mus musculus]
Length = 448
Score = 37.2 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 36/148 (24%)
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+V AQ+ + + I ++ + + + R+ +++ S +
Sbjct: 288 SVGDYAQTLKKFQYQLACRSQAPCANKDEADLISKQAAEEVWARVTMNRQLLDHMDSWTA 347
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
N + L+ G P T+
Sbjct: 348 KFRNIIMHVFCTYLDSRLPPHPKYPDGKTFTSQHFVQTPNKPDVTNENVFCIYQSAVNPP 407
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ Q + +P H L+
Sbjct: 408 HYELIYQRHVYNLPKGRNNMFHTLLMFL 435
>gi|26325332|dbj|BAC26420.1| unnamed protein product [Mus musculus]
Length = 438
Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 36/148 (24%)
Query: 54 AVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSH 113
+V AQ+ + + I ++ + + + R+ +++ S +
Sbjct: 278 SVGDYAQTLKKFQYQLACRSQAPCANKDEADLISKQAAEEVWARVTMNRQLLDHMDSWTA 337
Query: 114 ILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGK 173
N + L+ G P T+
Sbjct: 338 KFRNIIMHVFCTYLDSRLPPHPKYPDGKTFTSQHFVQTPNKPDVTNENVFCIYQSAVNPP 397
Query: 174 TPNKVEQSLLRIIPPKHQYNAHYWLVLH 201
+ Q + +P H L+
Sbjct: 398 HYELIYQRHVYNLPKGRNNMFHTLLMFL 425
>gi|296810630|ref|XP_002845653.1| methyl-CpG binding domain-containing protein 4 [Arthroderma otae
CBS 113480]
gi|238843041|gb|EEQ32703.1| methyl-CpG binding domain-containing protein 4 [Arthroderma otae
CBS 113480]
Length = 276
Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L+VA + ++ ++FE T + + ++L + I+ +G +++
Sbjct: 43 PFRLLVATIFLNRTRGEAAIPILYNVFEQYPTAESLANANVEELASLIQRLGFQNSRAKK 102
Query: 108 IISLSHILINEFDNK 122
I+L+ +
Sbjct: 103 CITLAKSWVENIPEC 117
>gi|303272857|ref|XP_003055790.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463764|gb|EEH61042.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 249
Score = 36.8 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 20/173 (11%)
Query: 52 IVAVLLSAQSTDVN----------VNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
+V +LS +TDVN ++ + + + A +++ I+ G+
Sbjct: 76 LVGTILSQNTTDVNSARAFARLAATFAPSRDGRGRLNFWETIRAAPSAEVEAAIKCGGLA 135
Query: 102 RKKSENII---------SLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIP 152
K+ I + + D L+R G+G K +L
Sbjct: 136 EIKTSRIKVILNTLVEERGAPCMEYLRDMSDDDVKSELSRFKGVGPKTIACVLVFCLRRF 195
Query: 153 TIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYV 205
+ + + + L R +P + + H LV HG+
Sbjct: 196 -PVDAHVWKIAMALGWVPKSASRDAAYEHLNRRVPDACKLDLHVLLVEHGKAY 247
>gi|160947243|ref|ZP_02094410.1| hypothetical protein PEPMIC_01176 [Parvimonas micra ATCC 33270]
gi|158446377|gb|EDP23372.1| hypothetical protein PEPMIC_01176 [Parvimonas micra ATCC 33270]
Length = 291
Score = 36.8 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 26/206 (12%)
Query: 23 KELEEIF---YLFSLK--WPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNK-------AT 70
KE+ ++ + + L NHF ++++ ++SA + + K
Sbjct: 83 KEIRKVLSNNEILPKAMEYGEGIRILN-QNHFEMLISFIISANNMIPRIKKSIEVISMRY 141
Query: 71 KHLFEIADTPQKMLAIGEKKLQNY-------IRTIGIYRKKSENIISLS----HILINEF 119
+ + ++L +G K+ + +++ L N
Sbjct: 142 GKFICEDENRKYYSFPTVEELSRATVEDLRKFAKVGFRDKRIFDTVNMILNEKIDLDNFE 201
Query: 120 DNKIPQTLEGLTRLPGIGRKGANVILSMAFGI-PTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + E L + G+G K A+ I+ ++ VD I R+ + + K+
Sbjct: 202 NLETDILREELLKFSGVGNKVADCIMLFSYKRGEVFPVDVWIKRVMEELFIKKETPVKKI 261
Query: 179 EQSLLRIIPPKHQYNAHYWLVLHGRY 204
+ RI K+ A +L +GR
Sbjct: 262 SKEADRIF-GKYAGYAQQYLFYYGRE 286
>gi|327296025|ref|XP_003232707.1| hypothetical protein TERG_06699 [Trichophyton rubrum CBS 118892]
gi|326465018|gb|EGD90471.1| hypothetical protein TERG_06699 [Trichophyton rubrum CBS 118892]
Length = 276
Score = 36.8 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%)
Query: 48 HFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L++A + ++ +FE T + + +L I+ +G+ ++
Sbjct: 43 PFRLLIATIFLNRTRGEVAVPVICSVFEHYPTIESLANANFDELVLLIQRLGLQNSRARK 102
Query: 108 IISLSHILINEFDNK 122
I+L+ I
Sbjct: 103 CIALAKAWIANAPEC 117
>gi|320166303|gb|EFW43202.1| biotin synthase [Capsaspora owczarzaki ATCC 30864]
Length = 393
Score = 36.8 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/174 (9%), Positives = 58/174 (33%), Gaps = 2/174 (1%)
Query: 7 SDSYQGNSPLGCLYTPKELEEIFY--LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDV 64
+++ + + + +T E++EIF L L + + + + + LLS ++
Sbjct: 67 TETARRDIRIRHDWTRAEIQEIFDTPLLDLMYRAATVHRTHHDPRQVQQCTLLSIKTGGC 126
Query: 65 NVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIP 124
+ + A T K + + + + + + + +
Sbjct: 127 SEDCAYCPQSSKYTTNVKAERLMQLQSVVDAARKAKEAGSTRFCMGAAWRDVIHRKSNFA 186
Query: 125 QTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
LE ++ + +G + + ++ + + ++ + + P +
Sbjct: 187 HVLEMVSEVRSMGLEVCATLGMLSPEQAVQLKNAGLTAYNHNLDTSREFYPKII 240
>gi|226287660|gb|EEH43173.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 330
Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%)
Query: 46 VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKS 105
+ F L++A + ++ ++FE T + E+ + IR +G+ ++
Sbjct: 101 HDPFRLLIATIFLNRTRGEVAIPVLYNVFERYPTVSALAEAREEDVVTMIRCLGLQNARA 160
Query: 106 ENIISLSHILINEFD 120
I+L+ + I
Sbjct: 161 RKCINLAKLWIENPP 175
>gi|327396117|dbj|BAK13539.1| protein SbmA [Pantoea ananatis AJ13355]
Length = 415
Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 2/164 (1%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
GEL++ ++ L+VA+ A N ++ A + +
Sbjct: 59 APGELWFYAYYWLMVAIFAIAWRLTDNHPWQRWSVWGSALIIFVTWFGVQVGVAVNAWYG 118
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
Y + + + INEF ++ L IG +S ++
Sbjct: 119 PFYDLIQKALTKAGSVQINEFYAQVMAFLGIALIAVVIGV-MNAFFISHWVFRWRTAMNN 177
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY-NAHYWLVLH 201
+ R+ G E ++ + N ++
Sbjct: 178 YYMHHWQRLRHVEGAAQRVQEDTMRFATTLESWGVNFIQAIMTL 221
>gi|308188995|ref|YP_003933126.1| Protein sbmA [Pantoea vagans C9-1]
gi|308059505|gb|ADO11677.1| Protein sbmA [Pantoea vagans C9-1]
Length = 360
Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 45/164 (27%), Gaps = 2/164 (1%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
GEL++ ++ L+V++ A N ++ A + +
Sbjct: 5 APGELWFYAYYWLLVSLFALAWRMIDNHPWQRWSVWGSALIIFVTWFGVQVGVAINAWYQ 64
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
Y + I + I + ++ + IG +S ++
Sbjct: 65 PFYDLIQKAITKAGSVTITQLYTEMAGIAGIVMVAVAIGV-TNAFFISHWVFRWRTAMNN 123
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY-NAHYWLVLH 201
+ R+ G E ++ + + ++
Sbjct: 124 YYMHNWQRLRHVEGAAQRVQEDTMRFAQTLEGWGVSFIQAIMTL 167
>gi|291615852|ref|YP_003518594.1| SbmA [Pantoea ananatis LMG 20103]
gi|291150882|gb|ADD75466.1| SbmA [Pantoea ananatis LMG 20103]
Length = 415
Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 2/164 (1%)
Query: 39 PKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTI 98
GEL++ ++ L+VA+ A N ++ A + +
Sbjct: 59 APGELWFYAYYWLMVAIFAIAWRLTDNHPWQRWSVWGSALIIFVTWFGVQVGVAVNAWYG 118
Query: 99 GIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDT 158
Y + + + INEF ++ L IG +S ++
Sbjct: 119 PFYDLIQKALTKAGSVQINEFYAQVMAFLGIALIAVVIGV-MNAFFISHWVFRWRTAMNN 177
Query: 159 HIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQY-NAHYWLVLH 201
+ R+ G E ++ + N ++
Sbjct: 178 YYMHHWQRLRHVEGAAQRVQEDTMRFATTLESWGVNFIQAIMTL 221
>gi|66821583|ref|XP_644249.1| cytochrome P450 family protein [Dictyostelium discoideum AX4]
gi|74897330|sp|Q554S4|C519A_DICDI RecName: Full=Probable cytochrome P450 519A1
gi|60472251|gb|EAL70204.1| cytochrome P450 family protein [Dictyostelium discoideum AX4]
Length = 530
Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 8/181 (4%)
Query: 22 PKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSA--QSTDVNVNKATKHL------ 73
++++EI+ + L N L+ +++S + D+ ++ L
Sbjct: 239 KRQVQEIYDYLEGIYNQHDTNLDTENPKDLMDLLIISTEGKERDMIIHIGMDCLLAGSDS 298
Query: 74 FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRL 133
+ I +Q I K E+ I + + + + RL
Sbjct: 299 TSATCEWFCLFMINNPDVQKKAYQELINALKDEDNKKFIPISKKDNCPYMLSIFKEVLRL 358
Query: 134 PGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYN 193
+G G + I + N G++ + + R I K Q +
Sbjct: 359 RPVGVLGIPRVALEETTIMGYTIPKGSQIFQNVYGMSHLFVSDPYKFKPERWIEYKKQKD 418
Query: 194 A 194
Sbjct: 419 L 419
>gi|189208093|ref|XP_001940380.1| DNA base excision repair N-glycosylase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976473|gb|EDU43099.1| DNA base excision repair N-glycosylase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 345
Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK---LQNYIRTIGIYRKKS 105
F ++A++LS+Q+ D + +++ E + ++ + L +I +G + K+
Sbjct: 173 FQTLIALMLSSQTKDTVLAPVMRNMQEKMPGGFNLESVLALEPPALNAFINKVGFHNLKT 232
Query: 106 ENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGI 151
+ I + IL +++++ IP ++EGL LPG+G K + LS A+G
Sbjct: 233 KYIKQTAEILRDKWNSDIPDSIEGLVSLPGVGPKMGYLCLSAAWGR 278
>gi|313885640|ref|ZP_07819390.1| endonuclease III family protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619370|gb|EFR30809.1| endonuclease III family protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 224
Score = 36.4 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 32 FSLKWPSPKGELYY--VNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD-TPQKMLAIGE 88
L WPS + ++ + + +I+ L +T N KA L P+++L++ +
Sbjct: 12 LDLIWPSDDFDYHWPGNSKWEIILGAFLVQNTTWTNTEKALTRLQAETSLQPKQILSLNQ 71
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEF---------DNKIPQTLEGLTRLPGIGRK 139
++L I + G ++ KS I+ L + L GIG +
Sbjct: 72 EELIALIFSAGFHQSKSNLILKFFTWLHSYDFDLKKIQVAYPDTQALRNKLLSFKGIGEE 131
Query: 140 GANVILSMAFGIPTIGVDTHIFRIS---NRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHY 196
A+V+L F P D + ++ A + + ++ + + H
Sbjct: 132 TADVLLLYIFDRPVFIADNYARKLFLGLKFQPAAKYRLLKEAIEAAGKDLSLIDYQKFHA 191
Query: 197 WLVLHGR 203
++ G+
Sbjct: 192 AIIAFGK 198
>gi|313675195|ref|YP_004053191.1| biotin synthase [Marivirga tractuosa DSM 4126]
gi|312941893|gb|ADR21083.1| biotin synthase [Marivirga tractuosa DSM 4126]
Length = 334
Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 13/167 (7%), Positives = 53/167 (31%), Gaps = 3/167 (1%)
Query: 14 SPLGCLYTPKELEEIFY--LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATK 71
+ + +T +E+E+I+ + L + + + + + V LLS ++ + A
Sbjct: 2 TEIRNDWTKEEIEKIYNQPILELIYQAATVHREFNDPSEVQVCTLLSVKTGGCPEDCAYC 61
Query: 72 HLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLT 131
T K+ + + I + + + + + + +
Sbjct: 62 PQAARYHTDVKVHKLLPTEQVLESARIAKENGSTRFCMGAAWREVRDNRDFDRVLDM-VK 120
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ + + + + + ++ ++ + + + +
Sbjct: 121 GINELDMEVCCTLGMLTESQAQKLKEAGLYAYNHNLDTSEEHYDDII 167
>gi|154148962|ref|YP_001406054.1| endonuclease III [Campylobacter hominis ATCC BAA-381]
gi|153804971|gb|ABS51978.1| endonuclease III [Campylobacter hominis ATCC BAA-381]
Length = 216
Score = 36.0 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 20/176 (11%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F +++ +L+ + NV A +L +K+ A+ +KL I+ G Y K++
Sbjct: 26 FEVVIGAILTQNTKWQNVEIALCNLKNYDAINLEKIAAMPREKLAELIKPSGFYNMKAKR 85
Query: 108 ----IISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+++ + + K E L G+G + A+ IL A P + VD + +I
Sbjct: 86 LQMLCTAIATDFGDFENFKDSVCREWLLSQKGVGAESADSILCYACERPEMVVDNYALKI 145
Query: 164 SNRIGLAPGKTPNKVEQ----SLLRIIPPKHQYN-------AHYWLVLHGRYVCKA 208
+G E +I + H +V CKA
Sbjct: 146 LGILGYEFESYDEAKEFLSSLDFEKIYTKTGLSDENSVFSLYHGLIVEF----CKA 197
>gi|119181292|ref|XP_001241871.1| hypothetical protein CIMG_05767 [Coccidioides immitis RS]
Length = 1225
Score = 36.0 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F L++A + ++ +FE T + L IR +G ++
Sbjct: 78 DPFRLLIATIFLNRTRGEAAIPVLYDVFENYPTIGSLADADVDGLVAMIRKLGFQNARAN 137
Query: 107 NIISLSHILI 116
IS++ + +
Sbjct: 138 KCISIAKLWM 147
>gi|300172427|ref|YP_003771592.1| endonuclease III [Leuconostoc gasicomitatum LMG 18811]
gi|299886805|emb|CBL90773.1| Endonuclease III [Leuconostoc gasicomitatum LMG 18811]
Length = 215
Score = 36.0 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 16/199 (8%)
Query: 19 LYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIAD 78
+ E F K +G + + +++ +L ++ NV K+ +L EI D
Sbjct: 1 MIFKANYYETFQELLSKHGH-QGWWPAESDWEMMIGAVLVQNTSWTNVQKSITNLKEITD 59
Query: 79 TPQKML-AIGEKKLQNYIRTIGIYRKKSENIISL--------SHILINEFDNKIPQTLEG 129
++ +KKL + I+ G Y KS+ I L +++ ++ +
Sbjct: 60 FNPALILNTPQKKLIDAIKPSGFYNAKSKTIKELFTLLSKHKFNLIYLNKNHTTNELRNI 119
Query: 130 LTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIG------LAPGKTPNKVEQSLL 183
L + GIG + A+ IL F P D++ ++ + L+ +E S++
Sbjct: 120 LLSVTGIGPETADDILLYVFNRPVFIPDSYTRKLVAFLENVEFKSLSYQSLKRDLEPSII 179
Query: 184 RIIPPKHQYNAHYWLVLHG 202
+ H + +G
Sbjct: 180 NQMTLSELQEFHALIDEYG 198
>gi|297802586|ref|XP_002869177.1| hypothetical protein ARALYDRAFT_353424 [Arabidopsis lyrata subsp.
lyrata]
gi|297315013|gb|EFH45436.1| hypothetical protein ARALYDRAFT_353424 [Arabidopsis lyrata subsp.
lyrata]
Length = 1072
Score = 36.0 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 203 RYVCKARKPQCQSCIISNLCKRI 225
+ C P C +C + + CK
Sbjct: 725 QVFCTKVIPNCNACPMKSECKYF 747
>gi|295399897|ref|ZP_06809878.1| hypothetical protein GeothDRAFT_1015 [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111584|ref|YP_003989900.1| hypothetical protein GY4MC1_2593 [Geobacillus sp. Y4.1MC1]
gi|294978300|gb|EFG53897.1| hypothetical protein GeothDRAFT_1015 [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216685|gb|ADP75289.1| hypothetical protein GY4MC1_2593 [Geobacillus sp. Y4.1MC1]
Length = 379
Score = 36.0 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Query: 143 VILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPKHQYNAHYWLVLHG 202
+ +G+ + P K S+ +I G
Sbjct: 275 DVYCYQYGLVDYKTQEGWRTVWEEWKKIPNNHCPKTPASMDYLIYKS-----------IG 323
Query: 203 RYVCKARKPQCQSCIISNLCK 223
+ CK K +C+ C+++ +C
Sbjct: 324 KKYCKLNKRKCEECVLNQVCP 344
>gi|320159811|ref|YP_004173035.1| putative alpha-galactosidase [Anaerolinea thermophila UNI-1]
gi|319993664|dbj|BAJ62435.1| putative alpha-galactosidase [Anaerolinea thermophila UNI-1]
Length = 443
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 12/133 (9%), Positives = 32/133 (24%), Gaps = 9/133 (6%)
Query: 28 IFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIG 87
I +P+ L Y N ++V+ + + + + V + A + +
Sbjct: 129 IVRDMEKYYPNAVL-LNYTNPMAMLVSAI--QKQSFITVTGLCHSVQGTAMMLARWIGAP 185
Query: 88 EKKLQNYIRTIGIYRKKSENIISLSHILI------NEFDNKIPQTLEGLTRLPGIGRKGA 141
+++ I E + E + + +G
Sbjct: 186 YEEIDYVCAGINHQAWYLEYKWNGQDAYPLIRKAVTERPEVYNEEIVRNEMFLALGYYVT 245
Query: 142 NVILSMAFGIPTI 154
+
Sbjct: 246 ESSGHNSEYNWWF 258
>gi|300778073|ref|ZP_07087931.1| biotin synthase [Chryseobacterium gleum ATCC 35910]
gi|300503583|gb|EFK34723.1| biotin synthase [Chryseobacterium gleum ATCC 35910]
Length = 327
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 55/168 (32%), Gaps = 3/168 (1%)
Query: 13 NSPLGCLYTPKELEEIFY--LFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKAT 70
+ L +T +E+EEI++ L L + + + + + ++ LLS ++ + +
Sbjct: 4 KTTLRNNWTKEEIEEIYHLPLMELIYKAATVHREWHDPSEVQISTLLSIKTGGCPEDCSY 63
Query: 71 KHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGL 130
T K+ A+ + S ++ + + + +
Sbjct: 64 CGQAARYHTNIKVQALLPTETVIAHAQKAKDSGSSRFCMAAAWREVRNNRDFDRVIDM-V 122
Query: 131 TRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNRIGLAPGKTPNKV 178
+ +G + + + + ++ ++ + + +
Sbjct: 123 KGVNDLGLEVCCTLGMLTEEQAVRLQEAGLYAYNHNLDTSEQYYEEII 170
>gi|319902040|ref|YP_004161768.1| cobalamin (vitamin B12) biosynthesis CbiD protein [Bacteroides
helcogenes P 36-108]
gi|319417071|gb|ADV44182.1| cobalamin (vitamin B12) biosynthesis CbiD protein [Bacteroides
helcogenes P 36-108]
Length = 633
Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 180 QSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQ 212
+ L IIPP L+ H + C P+
Sbjct: 585 RELWDIIPPDKLSAFSNLLIEHCQRHCTPLLPK 617
>gi|326671887|ref|XP_685297.4| PREDICTED: guanylate cyclase soluble subunit beta-2-like [Danio
rerio]
Length = 768
Score = 35.7 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%)
Query: 2 VSSKKSDSYQGNSPLGCLYTPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQS 61
V+ +K+ + Q NS L K+ EE ++ + + + + L+ ++++ Q
Sbjct: 200 VTKRKAQTRQNNSEEEILEVKKDKEETMRRMKARYANLQLCPRKRSPWELVRSIVMLGQG 259
Query: 62 TDVNVNKATKHLFEIADTPQKMLAIGEKKLQN 93
+ + A + +
Sbjct: 260 NLRQSFTPSYPKTLWIEEQAFCNAFPFHIVFD 291
>gi|57241984|ref|ZP_00369924.1| endonuclease III [Campylobacter upsaliensis RM3195]
gi|57017176|gb|EAL53957.1| endonuclease III [Campylobacter upsaliensis RM3195]
Length = 227
Score = 35.7 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 36/207 (17%)
Query: 27 EIFYLFSLKWPSPKGELYYVN----------HFTLIVAVLLSAQSTDVNVNKATKHLFE- 75
EIF +L + + F L+++V+L+ + NV KA ++ +
Sbjct: 5 EIFKKLLSF------DLKWRDFDWLEGRGLSEFELLISVILTQNTNWNNVLKALENCKKA 58
Query: 76 IADTPQKMLAIGEKKLQNYIRTIGIYRKKSENII----SLSHILINEFDNKIPQTLEGLT 131
T ++ + K L I+ G Y K++ + ++ + K + E L
Sbjct: 59 QISTLNQVANLDSKALAELIKPSGFYNTKAKRLKGLAEAILQEFDGMKNFKENVSREWLL 118
Query: 132 RLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR-------IGLAPGKTPNKVEQSLLR 184
+ G+G + + IL+ + VD + +R++ N +EQ
Sbjct: 119 DIKGLGYESVDGILNYLCKREILVVDNYTYRLALHLGYELEDYEDLREFFQNGIEQERRN 178
Query: 185 IIPP--------KHQYNAHYWLVLHGR 203
+ + H ++ G+
Sbjct: 179 LCQILGRKHELYELYQIYHALIIAFGK 205
>gi|283956480|ref|ZP_06373960.1| possible nuclease [Campylobacter jejuni subsp. jejuni 1336]
gi|283792200|gb|EFC30989.1| possible nuclease [Campylobacter jejuni subsp. jejuni 1336]
Length = 228
Score = 35.7 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRTIGIYRKKS 105
N F L+++V+L+ + NV KA ++L + +++ + +L I+ G Y K+
Sbjct: 29 NEFELLISVILTQNTNWKNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKA 88
Query: 106 ENIISLSHILINEF----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+ + L +IN + + K + E L + G+G + + IL+ + VD +
Sbjct: 89 KRLKGLVESIINTYENLENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDNYSL 148
Query: 162 RISNRIGLAPGKTPNKVE 179
R++ +G E
Sbjct: 149 RLAFHLGYEFENYEELRE 166
>gi|328712829|ref|XP_003244914.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Acyrthosiphon
pisum]
Length = 206
Score = 35.7 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 38/126 (30%), Gaps = 7/126 (5%)
Query: 45 YVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKK 104
+ N + L++A + + T TP+ + ++L + + +G+ +
Sbjct: 80 FHNPWQLLIATIFLTKVTAKLAIPKIHTFLLKWPTPEDVTKADPQQLLSSVENLGLENTR 139
Query: 105 SENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRIS 164
+ I + + + L GIG+ G + I
Sbjct: 140 VKTIKRFTADFLLKNWKYP-------IELYGIGKYGNDSYRLFCVNEWRKVQPDDILLSK 192
Query: 165 NRIGLA 170
+ L
Sbjct: 193 YKDWLT 198
>gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842]
gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842]
Length = 468
Score = 35.7 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 203 RYVCKARKPQCQSCIISNLCKRIKQ 227
+ C P C SC I C+ ++
Sbjct: 56 KTFCYPENPNCCSCPIQMFCRNGRE 80
>gi|300856790|ref|YP_003781774.1| putative methyladenine DNA glycosylase [Clostridium ljungdahlii DSM
13528]
gi|300436905|gb|ADK16672.1| predicted methyladenine DNA glycosylase [Clostridium ljungdahlii
DSM 13528]
Length = 288
Score = 35.3 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 3/35 (8%)
Query: 191 QYNAHYWLVLHGRYVCKARKPQCQSCIISNLCKRI 225
+ + +C + P+C C + N C
Sbjct: 252 YGQLNQEKME---CICSEKNPKCLKCGVKNYCNYY 283
>gi|242229734|ref|XP_002477789.1| predicted protein [Postia placenta Mad-698-R]
gi|220721966|gb|EED77012.1| predicted protein [Postia placenta Mad-698-R]
Length = 297
Score = 35.3 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 10/161 (6%)
Query: 29 FYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGE 88
+ P E + + L+VAV L ++ + L + T + + +
Sbjct: 140 YRGLYDAKPILIQEYVAHDPWKLLVAVTLLNKTAGTHAVPVFLELMDAWATAHALAQVPQ 199
Query: 89 KKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMA 148
LQ I +G+ R +SE +I+LS + + G G K
Sbjct: 200 GVLQARIAHLGLGRSRSERLIALSQAYCADPPVRGVMRTSRCYLDVGDGVK--------- 250
Query: 149 FGIPTIGVDTHIFRISNRIGLAPGKTPNKVEQSLLRIIPPK 189
+ S L + E ++P
Sbjct: 251 -RQRYPPTEASHLPGSGPYALDSYRIFCAGEDEWKAVMPRD 290
>gi|295662609|ref|XP_002791858.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226279510|gb|EEH35076.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 394
Score = 35.3 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F L++A + ++ +FE T + E+ + IR +G+ ++
Sbjct: 166 DPFRLLIATIFLNRTRGEVAIPVLYSVFERYPTVSALAEAQEEDVVTMIRCLGLQNARAR 225
Query: 107 NIISLSHILINEFD 120
I+L+ + I
Sbjct: 226 KCINLAKLWIENPP 239
>gi|332263709|ref|XP_003280894.1| PREDICTED: cystatin-C-like isoform 1 [Nomascus leucogenys]
gi|332263711|ref|XP_003280895.1| PREDICTED: cystatin-C-like isoform 2 [Nomascus leucogenys]
Length = 146
Score = 35.3 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 199 VLHGRYVCKARKPQCQSCIISNLCKRIKQ 227
V GR C +P +C + + +K+
Sbjct: 92 VELGRTTCTKTQPNLDNCPLHDQ-PHLKR 119
>gi|303318483|ref|XP_003069241.1| hypothetical protein CPC735_024320 [Coccidioides posadasii C735
delta SOWgp]
gi|240108927|gb|EER27096.1| hypothetical protein CPC735_024320 [Coccidioides posadasii C735
delta SOWgp]
gi|320039048|gb|EFW20983.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 321
Score = 34.9 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ F L++A + ++ +FE T + L IR +G ++
Sbjct: 76 DPFRLLIATIFLNRTRGEAAIPVLYDVFENYPTIGSLADADVDGLVAMIRKLGFQNARAN 135
Query: 107 NIISLSHILI 116
IS++ + +
Sbjct: 136 KCISIAKLWM 145
>gi|196003048|ref|XP_002111391.1| hypothetical protein TRIADDRAFT_5883 [Trichoplax adhaerens]
gi|190585290|gb|EDV25358.1| hypothetical protein TRIADDRAFT_5883 [Trichoplax adhaerens]
Length = 146
Score = 34.9 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Query: 42 ELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIY 101
E + N + L+++ LL T+ F TP+ K++ + +
Sbjct: 21 EKLFDNPWKLLISTLLLHNITEKKAIPLLWKFFGHYPTPEIASNANWKEMAENFSALDMQ 80
Query: 102 RKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIF 161
+++ II S I + L GIG+ G +
Sbjct: 81 HDRAKIIIKFSDEYIKKDWCYP-------CELFGIGKYGNDSYRIFCVNEWKKVFPRDYN 133
Query: 162 RISNRIGLAPGK 173
+ L
Sbjct: 134 LVRYHKWLCQKY 145
>gi|121612421|ref|YP_001000761.1| endonuclease III, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|157415344|ref|YP_001482600.1| nuclease [Campylobacter jejuni subsp. jejuni 81116]
gi|167005681|ref|ZP_02271439.1| possible nuclease [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249261|gb|EAQ72222.1| endonuclease III, putative [Campylobacter jejuni subsp. jejuni
81-176]
gi|157386308|gb|ABV52623.1| possible nuclease [Campylobacter jejuni subsp. jejuni 81116]
Length = 228
Score = 34.9 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHLFEIADTP-QKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L+++V+L+ + NV KA ++L + +++ + +L I+ G Y K++
Sbjct: 31 FELLISVILTQNTNWKNVLKALENLKKENIVSLEQINTLSNLELATLIKPSGFYNTKAKR 90
Query: 108 IISLSHILINEF----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ L +IN + + K + E L + G+G + + IL+ + VD + R+
Sbjct: 91 LKGLVESIINTYENLENFKTNVSREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRL 150
Query: 164 SNRIGLAPGKTPNKVE 179
+ +G E
Sbjct: 151 AFCLGYEFENYEELRE 166
>gi|309807274|ref|ZP_07701244.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
gi|308166334|gb|EFO68543.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
Length = 61
Score = 34.9 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 175 PNKVEQSLLRIIPPKHQYNAHYWLVLHGRY 204
P+++E L I+P K H+ ++ GRY
Sbjct: 16 PSQIETILENIMPQKDWIKLHHAMIAFGRY 45
>gi|302674673|ref|XP_003027021.1| hypothetical protein SCHCODRAFT_61605 [Schizophyllum commune H4-8]
gi|300100706|gb|EFI92118.1| hypothetical protein SCHCODRAFT_61605 [Schizophyllum commune H4-8]
Length = 223
Score = 34.9 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + +++A + + L +I DTP+KM ++ IR +G+ +S
Sbjct: 31 DPWKVLIATIFLNVTHGTQSIPIVHALLDIWDTPEKMAQASPDEIYPCIRHLGLGHSRSM 90
Query: 107 NIISLSHIL 115
I+ LS
Sbjct: 91 RIVDLSRAW 99
>gi|307747985|gb|ADN91255.1| Possible nuclease [Campylobacter jejuni subsp. jejuni M1]
gi|315932219|gb|EFV11162.1| hhH-GPD superfamily base excision DNA repair family protein
[Campylobacter jejuni subsp. jejuni 327]
Length = 228
Score = 34.9 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 49 FTLIVAVLLSAQSTDVNVNKATKHL-FEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSEN 107
F L+++V+L+ + NV KA ++L E + +++ + +L I+ G Y K++
Sbjct: 31 FELLISVILTQNTNWKNVLKALENLKKENITSLEQINTLSNLELATLIKPSGFYNTKAKR 90
Query: 108 IISLSHILINEF----DNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRI 163
+ L +IN + + K + E L + G+G + + IL+ + VD++ R+
Sbjct: 91 LKGLVESIINTYENLENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRL 150
Query: 164 SNRIGLAPGKTPNKVE 179
+ +G E
Sbjct: 151 AFHLGYEFENYEELRE 166
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.114 0.331
Lambda K H
0.267 0.0348 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,554,990,942
Number of Sequences: 14124377
Number of extensions: 64922384
Number of successful extensions: 253340
Number of sequences better than 10.0: 5933
Number of HSP's better than 10.0 without gapping: 5138
Number of HSP's successfully gapped in prelim test: 795
Number of HSP's that attempted gapping in prelim test: 243954
Number of HSP's gapped (non-prelim): 6226
length of query: 227
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 93
effective length of database: 2,950,127,112
effective search space: 274361821416
effective search space used: 274361821416
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.9 bits)