RPSBLAST alignment of GI: 254780383 and protein with PDBid: 3fsp
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A* Length = 369
Score = 149 bits (377), Expect = 4e-37
Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 47 NHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKKLQNYIRTIGIYRKKSE 106
+ + + V+ ++ Q+ V + + T + + E ++ +G Y +
Sbjct: 38 DPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVR- 96
Query: 107 NIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFGIPTIGVDTHIFRISNR 166
N+ + + + K+P + +RL G+G +LS+A+G+P VD ++ R+ +R
Sbjct: 97 NLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSR 156
Query: 167 IGLAPGK-----TPNKVEQSLLRIIPPKHQYNAHYWLVLHGRYVCKARKPQCQSCIISNL 221
+ L T + EQ + I+ ++ + L+ G VC R+P C C +
Sbjct: 157 LFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAY 216
Query: 222 CK 223
C+
Sbjct: 217 CQ 218