RPSBLAST alignment of GI: 254780383 and protein with PDBid: 3n5n
>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens} Length = 287
Score = 132 bits (333), Expect = 7e-32
Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 7/198 (3%)
Query: 33 SLKW--PSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTPQKMLAIGEKK 90
L W + + + V+ ++ Q+ V + T Q + + ++
Sbjct: 32 DLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEE 91
Query: 91 LQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKGANVILSMAFG 150
+ +G Y + ++ + LPG+GR A I S+AFG
Sbjct: 92 VNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFG 151
Query: 151 IPTIGVDTHIFRISNRIGLAPGKTPNKVEQS-----LLRIIPPKHQYNAHYWLVLHGRYV 205
T VD ++ R+ R+ + + +++ P + + + G V
Sbjct: 152 QATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATV 211
Query: 206 CKARKPQCQSCIISNLCK 223
C ++P C C + +LC+
Sbjct: 212 CTPQRPLCSQCPVESLCR 229