RPSBLAST alignment of GI: 254780383 and SCOP domain: d1orna_

Alignment

 Score =  130 bits (327), Expect = 1e-31
 Identities = 86/212 (40%), Positives = 137/212 (64%), Gaps = 5/212 (2%)

Query: 21  TPKELEEIFYLFSLKWPSPKGELYYVNHFTLIVAVLLSAQSTDVNVNKATKHLFEIADTP 80
           T +++       +  +P    EL + N F L++AV+LSAQ TD  VNK TK LFE   TP
Sbjct: 3   TKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTP 62

Query: 81  QKMLAIGEKKLQNYIRTIGIYRKKSENIISLSHILINEFDNKIPQTLEGLTRLPGIGRKG 140
              +A+  ++L+  IR+IG+YR K+ NI  L  +LI++++ ++P+  + L +LPG+GRK 
Sbjct: 63  HDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKT 122

Query: 141 ANVILSMAFGIPTIGVDTHIFRISNRIGL-APGKTPNKVEQSLLRIIPPKHQYNAHYWLV 199
           ANV++S+AFG+P I VDTH+ R+S R+G      +  +VE++L++IIP +     H+ ++
Sbjct: 123 ANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMI 182

Query: 200 LHGRYVCKARKPQCQSCIISNLC----KRIKQ 227
             GRY CKA+ PQC SC + +LC    KR+++
Sbjct: 183 FFGRYHCKAQSPQCPSCPLLHLCREGKKRMRK 214

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]