HHsearch alignment for GI: 254780384 and conserved domain: TIGR03296
>TIGR03296 M6dom_TIGR03296 M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.
Probab=92.61 E-value=0.078 Score=28.49 Aligned_cols=41 Identities=24% Similarity=-0.009 Sum_probs=25.5
Q ss_pred CEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 3466300323465518788887666766667775410142024467523
Q gi|254780384|r 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166 (665)
Q Consensus 118 ~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~~~~TvMSY~ 166 (665)
T Consensus 163 ~~~igv~~HE~gH~lGlPDlYd~~~~~~--------~~gvG~wdlM~~G 203 (286)
T TIGR03296 163 DGGVGVIAHELGHDLGLPDLYDTSYDGG--------GEPVGYWSLMSSG 203 (286)
T ss_pred CCCEEEEEHHHHCCCCCCCCCCCCCCCC--------CCCCCCEEECCCC
T ss_conf 8735567522214038975355567888--------8888761121488