HHsearch alignment for GI: 254780384 and conserved domain: cd00203
>cd00203 ZnMc Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease.
Probab=99.66 E-value=6.4e-16 Score=113.51 Aligned_cols=142 Identities=21% Similarity=0.215 Sum_probs=94.0
Q ss_pred EEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCC---CCEEEE-------CCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8750799999999999998865747568982478---716896-------158535663146775312244335443336
Q gi|254780384|r 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH---SDIKFI-------SSNNGYVCTPRYDSRYFMEINFDKADVWRY 112 (665)
Q Consensus 43 ~it~l~~~~~~~~R~Al~~ws~va~ItF~Ev~~~---~d~~f~-------~~~~g~a~~p~~~~~~~~~~~~~~~~~~~~ 112 (665)
T Consensus 15 ~~~~~~~~~~~~I~~Am~~~~~~tcIrF~~~~~e~~~~~i~~~~~~~~~~~~~gc~S~vG~~~~~~~q~~~l~~~~~--- 91 (167)
T cd00203 15 EEENLSAQIQSLILIAMQIWRDYLNIRFVLVGVEIDKADIAILVTRQDFDGGTGGWAYLGRVCDSLRGVGVLQDNQS--- 91 (167)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCC---
T ss_conf 01158999999999999999857674737788887765367764330358998448518988679985389658974---
Q ss_pred CCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHH
Q ss_conf 6666734663003234655187888876667666-677754101420244675235677666655200021122148999
Q gi|254780384|r 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191 (665)
Q Consensus 113 ~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~-~~~~~~~~~d~~~~TvMSY~~~~~~~~~~~~~~~~tpm~~DI~Al 191 (665)
T Consensus 92 ---~~~~~~gti~HElgHaLGf~He~sr~dRD~yv~i~~~~~~~~ydy~SVMhY~~~~f-----s~gqr~~~S~~Di~~i 163 (167)
T cd00203 92 ---GTKEGAQTIAHELGHALGFYHDHDRKDRDDYPTIDDTLNAEDDDYYSVMSYTKGSF-----SDGQRKDFSQCDIDQI 163 (167)
T ss_pred ---CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCC-----CCCCCCCCCHHHHHHH
T ss_conf ---33255424899999984887555666667876871366789776661612489886-----8766567899999999
Q ss_pred HHHC
Q ss_conf 9860
Q gi|254780384|r 192 QKIY 195 (665)
Q Consensus 192 q~lY 195 (665)
T Consensus 164 n~lY 167 (167)
T cd00203 164 NKLY 167 (167)
T ss_pred HHHC
T ss_conf 9639