HHsearch alignment for GI: 254780384 and conserved domain: cd04273
>cd04273 ZnMc_ADAMTS_like Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that combine ADAM-like metalloproteinases with thrombospondin type-1 repeats. ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) proteinases are inhibited by TIMPs (tissue inhibitors of metalloproteinases), and they play roles in coagulation, angiogenesis, development and progression of arthritis. They hydrolyze the von Willebrand factor precursor and various components of the extracellular matrix.
Probab=94.52 E-value=0.015 Score=32.81 Aligned_cols=20 Identities=40% Similarity=0.733 Sum_probs=16.3
Q ss_pred EEEHHHHHHHHHCCCCCCCC
Q ss_conf 63003234655187888876
Q gi|254780384|r 121 SHNALHEIGHALGLMHPGSY 140 (665)
Q Consensus 121 ~~t~iHEIGHALGL~Hp~~~ 140 (665)
T Consensus 141 a~t~AHElGHnLGm~HD~~~ 160 (207)
T cd04273 141 AFTIAHELGHVLGMPHDGDG 160 (207)
T ss_pred HHHHHHHHHHHCCCCCCCCC
T ss_conf 99999987764298668999