HHsearch alignment for GI: 254780384 and conserved domain: smart00235

>smart00235 ZnMc Zinc-dependent metalloprotease. Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.

Probab=99.26  E-value=2.5e-11  Score=85.75  Aligned_cols=91  Identities=34%  Similarity=0.553  Sum_probs=57.0

Q ss_pred             CEEEEEE--EECCHH-HHHHHHHHHHHHHHHHCCEEEEECCCCC--EEEECCCC-----EEEEECCCCCCCCCCCCCCCC
Q ss_conf             5026887--507999-9999999999886574756898247871--68961585-----356631467753122443354
Q gi|254780384|r   38 HRLSFDI--TELNPN-AQEVARWALGEWSKVVDLTFEETSIHSD--IKFISSNN-----GYVCTPRYDSRYFMEINFDKA  107 (665)
Q Consensus        38 ~~~t~~i--t~l~~~-~~~~~R~Al~~ws~va~ItF~Ev~~~~d--~~f~~~~~-----g~a~~p~~~~~~~~~~~~~~~  107 (665)
T Consensus         8 ~~v~Y~i~~~~~~~~~~r~~i~~A~~~w~~~Tci~F~~~~~~~~~~i~f~~~~~~gc~~s~~~~~--~----g~q~~~--   79 (140)
T smart00235        8 GTVPYVIDSSSLSPEEVREAIARAFAEWSDVTCLRFVERTSTADIYISFGKGDGSGCTLSHAGRP--G----GDQHFS--   79 (140)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECC--C----CCEEEE--
T ss_conf             97889988899997999999999999998547863896567887189998688899745763044--8----823345--


Q ss_pred             CCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCC
Q ss_conf             43336666673466300323465518788887666
Q gi|254780384|r  108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG  142 (665)
Q Consensus       108 ~~~~~~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~  142 (665)
T Consensus        80 ------~~~~c~~~g~i~HEigHaLGl~He~~r~D  108 (140)
T smart00235       80 ------LGNGCINTGVAAHELGHALGLYHEQSRSD  108 (140)
T ss_pred             ------CCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf             ------38881666624553453426655457763