HHsearch results for GI: 254780384 and protein with PDBid: 1eak_A
>1eak_A 72 kDa type IV collagenase; hydrolyse, matrix metalloproteinase, gelatinase A; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=99.66 E-value=5.8e-16 Score=112.46 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=64.6
Q ss_pred CCCCEEEEEEEE----CC-HHHHHHHHHHHHHHHHHHCCEEEEECC-CCCEEEECC---------------CCEEEEECC
Q ss_conf 567502688750----79-999999999999886574756898247-871689615---------------853566314
Q gi|254780384|r 35 LTTHRLSFDITE----LN-PNAQEVARWALGEWSKVVDLTFEETSI-HSDIKFISS---------------NNGYVCTPR 93 (665)
Q Consensus 35 ~~~~~~t~~it~----l~-~~~~~~~R~Al~~ws~va~ItF~Ev~~-~~d~~f~~~---------------~~g~a~~p~ 93 (665)
+...++|+-|.. |+ ...+.++|.||+.|++|++|+|+||.. .+||.+.+. .-++|++|.
T Consensus 88 W~k~~lTy~i~~~~~~l~~~~v~~~i~~AF~~Ws~vt~L~F~ev~~~~ADI~I~F~~~~HgD~~pFDG~gg~LAHAf~P~ 167 (421)
T 1eak_A 88 WDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPG 167 (421)
T ss_dssp CSSSEEEEEECCCCTTSCHHHHHHHHHHHHHHHHTSSSCEEEECCSSCCSEEEEEECSSCSSSCCCCSSSSBCEEECCSS
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 88786305861588889989999999999999756488604732588876699860577799988789998788856788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCC
Q ss_conf 67753122443354433366666734663003234655187888876
Q gi|254780384|r 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140 (665)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~g~y~~~t~iHEIGHALGL~Hp~~~ 140 (665)
.+ ..++..++.+..|..+.. +.+.|||||+||..+-+.+
T Consensus 168 ~g--~~Gd~HFD~dE~wt~g~~------~~~~~~~g~~~g~~~~~Pf 206 (421)
T 1eak_A 168 TG--VGGDSHFDDDELWTLGEG------QVVRVKYGNADGEYCKFPF 206 (421)
T ss_dssp ST--TTTCEEEETTSCEESSSS------CCCBCBSGGGTTSBCCSSE
T ss_pred CC--CCCCEECCCCCCEECCCC------CCCEEECCCCCCCCCCCCE
T ss_conf 88--887561265544053667------4300002566775544754