HHsearch results for GI: 254780384 and protein with PDBid: 1i76_A
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=99.91 E-value=1.7e-24 Score=163.96 Aligned_cols=142 Identities=23% Similarity=0.286 Sum_probs=90.1
Q ss_pred EEECCCEEEEECCCCCCCEEEEEEEEC-CHHHHHHHHHHHHHHHHHHCCEEEEECCC-CCEEEECCCC------------
Q ss_conf 354043467505765675026887507-99999999999998865747568982478-7168961585------------
Q gi|254780384|r 21 QYWSNYFIRYKPDVLTTHRLSFDITEL-NPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN------------ 86 (665)
Q Consensus 21 ~~~~~~~~~~~~d~~~~~~~t~~it~l-~~~~~~~~R~Al~~ws~va~ItF~Ev~~~-~d~~f~~~~~------------ 86 (665)
..|....+++++..+... + .+++++++|.||++|++|++|+|+||+.. +++++.....
T Consensus 7 ~kW~~~~iTY~~~~~~~~--------~~~~~~~~~i~~Af~~w~~v~~i~F~ev~~~~~~i~i~~~~~~~~~~~~~~~~~ 78 (163)
T 1i76_A 7 PKWERTNLTYRIRNYTPQ--------LSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPN 78 (163)
T ss_dssp CCCSCSEEEEEECCCCTT--------SCHHHHHHHHHHHHHHHHTTSSCEEEECSSSCCSEEEEEECSCCSSSCCCCSSS
T ss_pred CCCCCCEEEEEEECCCCC--------CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 978898489999247999--------998999999999999986836856999158786458998513666655546777
Q ss_pred EE-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 35-66314677531224433544333666667346630032346551878888766676666777541014202446752
Q gi|254780384|r 87 GY-VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165 (665)
Q Consensus 87 g~-a~~p~~~~~~~~~~~~~~~~~~~~~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~~~~TvMSY 165 (665)
+. +........+.....++....+.. ...+.+.+.+++|||||||||+||++.+ +||+|
T Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~HEIGHaLGL~H~~~~~-------------------svM~~ 138 (163)
T 1i76_A 79 GILAHAFQPGQGIGGDAHFDAEETWTN-TSANYNLFLVAAHEFGHSLGLAHSSDPG-------------------ALMYP 138 (163)
T ss_dssp SCCEEECCSSSTTTTCEEEETTSCCBS-SSSSCBHHHHHHHHHHHHHTBCCCSCTT-------------------STTSS
T ss_pred CCEEECCCCCCCEEEEEECCHHHCCCC-CCCCCEEEEEEEEECCCEECCCCCCCCC-------------------CEECC
T ss_conf 625430368774400585464434454-5666325788632001100456789998-------------------60765
Q ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHCC
Q ss_conf 3567766665520002112214899998608
Q gi|254780384|r 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196 (665)
Q Consensus 166 ~~~~~~~~~~~~~~~~tpm~~DI~Alq~lYG 196 (665)
..... .....+++..||+|||+|||
T Consensus 139 ~~~~~------~~~~~~l~~~Di~aiq~LYG 163 (163)
T 1i76_A 139 NYAFR------ETSNYSLPQDDIDGIQAIYG 163 (163)
T ss_dssp SCCCC------CCTTCCCCHHHHHHHHHHHC
T ss_pred EECCC------CCCCCCCCHHHHHHHHHHHC
T ss_conf 53378------87678699999999999619