HHsearch results for GI: 254780384 and protein with PDBid: 1y93_A
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase-inhibitor), acetohydroxamic acid, hydrolase; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* 3f1a_A* 3lka_A* 2wo9_A* 2wo8_A* ...
Probab=99.86 E-value=3.9e-22 Score=149.68 Aligned_cols=144 Identities=26% Similarity=0.342 Sum_probs=85.8
Q ss_pred CEEECCCEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCC-CEEEEC--CC-C---------
Q ss_conf 8354043467505765675026887507999999999999988657475689824787-168961--58-5---------
Q gi|254780384|r 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DIKFIS--SN-N--------- 86 (665)
Q Consensus 20 ~~~~~~~~~~~~~d~~~~~~~t~~it~l~~~~~~~~R~Al~~ws~va~ItF~Ev~~~~-d~~f~~--~~-~--------- 86 (665)
|..|+...+++++..+..+. ..+.+++++|.||+.|++|++|+|+|+.... ++.+.. .. .
T Consensus 2 G~kW~~~~iTy~~~~~~~~~-------~~~~~~~~i~~A~~~W~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (159)
T 1y93_A 2 GPVWRKHYITYRINNYTPDM-------NREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKG 74 (159)
T ss_dssp CCCCSSSEEEEEECCCCTTS-------CHHHHHHHHHHHHHHHHTTSSCEEEECSSSCCSEEEEEECSCCSSSCCCCSSS
T ss_pred CCCCCCCEEEEEEECCCCCC-------CHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 89879987899994579999-------98999999999999998640753798641578669998413456665567877
Q ss_pred EEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 356-6314677531224433544333666667346630032346551878888766676666777541014202446752
Q gi|254780384|r 87 GYV-CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165 (665)
Q Consensus 87 g~a-~~p~~~~~~~~~~~~~~~~~~~~~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~~~~TvMSY 165 (665)
+.. ........+......+....+.. ...+.+.+.|++|||||||||+||.+.+ +||++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~HEiGHaLGL~H~~~~~-------------------svM~~ 134 (159)
T 1y93_A 75 GILAHAFGPGSGIGGDAHFDEDEFWTT-HSGGTNLFLTAVHEIGHSLGLGHSSDPK-------------------AVMFP 134 (159)
T ss_dssp SCCEEECCSCSTTTTCEEEETTSCEES-SSSSEEHHHHHHHHHHHHTTCCCCSCTT-------------------STTSS
T ss_pred CEEEECCCCCCCEEEEEEECCCCCCEE-ECCCCCHHHHHHHHHHHHHCCCCCCCCC-------------------CEECC
T ss_conf 526641178884666797414432023-0477526555477665540788899998-------------------75665
Q ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHCC
Q ss_conf 3567766665520002112214899998608
Q gi|254780384|r 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196 (665)
Q Consensus 166 ~~~~~~~~~~~~~~~~tpm~~DI~Alq~lYG 196 (665)
..... .....+|+..||++||+|||
T Consensus 135 ~~~~~------~~~~~~l~~~Di~~i~~LYG 159 (159)
T 1y93_A 135 TYKYV------DINTFRLSADDIRGIQSLYG 159 (159)
T ss_dssp SCCCC------CGGGCCCCHHHHHHHHTTCC
T ss_pred CCCCC------CCCCCCCCHHHHHHHHHHHC
T ss_conf 23378------77778899999999999629