HHsearch results for GI: 254780384 and protein with PDBid: 2xs4_A
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=99.90 E-value=3.9e-24 Score=161.77 Aligned_cols=146 Identities=27% Similarity=0.405 Sum_probs=95.8
Q ss_pred HHCCEEECCCEEEEECCCCCCCEEEEEEEECC-HHHHHHHHHHHHHHHHHHCCEEEEECCC--CCEEEECC--C------
Q ss_conf 73583540434675057656750268875079-9999999999998865747568982478--71689615--8------
Q gi|254780384|r 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISS--N------ 85 (665)
Q Consensus 17 l~~~~~~~~~~~~~~~d~~~~~~~t~~it~l~-~~~~~~~R~Al~~ws~va~ItF~Ev~~~--~d~~f~~~--~------ 85 (665)
++.|..|....+++++...+ ..++ ..+++++|.||++|++|++|+|+||+.. +++++.+. .
T Consensus 2 ~l~G~kW~~~~iTy~i~~~~--------~~~~~~~~~~av~~Af~~W~~v~~i~F~ev~~~~~AdI~i~f~~~~~~~~~~ 73 (167)
T 2xs4_A 2 VLQGSKWNKTTLKYYIYNSS--------SHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYP 73 (167)
T ss_dssp CBCSCCCSSSEEEEEECCCC--------CSSCHHHHHHHHHHHHHHHHHTSSCEEEECSCGGGCSEEEEEECSCCSSSCC
T ss_pred CCCCCCCCCCEEEEEEECCC--------CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCCCC
T ss_conf 66698789986789994589--------9999999999999999998673683699970578773899953667776333
Q ss_pred -------CEEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------53566314677-5312244335443336666673466300323465518788887666766667775410142
Q gi|254780384|r 86 -------NGYVCTPRYDS-RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157 (665)
Q Consensus 86 -------~g~a~~p~~~~-~~~~~~~~~~~~~~~~~~~~g~y~~~t~iHEIGHALGL~Hp~~~~~g~~~~~~~~~~~~d~ 157 (665)
.+.++.|.... .+.....++....|... ..+...+.|++|||||||||+|+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~~~~~~~HEiGHaLGL~Hs~~~----------------- 135 (167)
T 2xs4_A 74 FDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSIN-GSGIDLITVAAHEIGHLLGIEHSNVS----------------- 135 (167)
T ss_dssp TTSSSCCSEEECCSTTTTGGGTTEEEEETTSCEESS-SSSEEHHHHHHHHHHHHHTBCCCSCT-----------------
T ss_pred CCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCC-----------------
T ss_conf 458876066522036778725558996542243348-88610667778776555167878999-----------------
Q ss_pred CEEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCC
Q ss_conf 024467523567766665520002112214899998608766
Q gi|254780384|r 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199 (665)
Q Consensus 158 ~~~TvMSY~~~~~~~~~~~~~~~~tpm~~DI~Alq~lYGan~ 199 (665)
.+||++... ..+..++..||+|||+|||++.
T Consensus 136 --~svM~~~~~---------~~~~~l~~~Di~~iq~lYGap~ 166 (167)
T 2xs4_A 136 --SALMYPYYT---------GIKRQLDNDDCLAVWDLYGYPF 166 (167)
T ss_dssp --TSTTSSSCC---------SCCCSCCHHHHHHHHHHHCCCC
T ss_pred --CCEECCCCC---------CCCCCCCHHHHHHHHHHHCCCC
T ss_conf --763367337---------8879899999999999849899